HHsearch alignment for GI: 254780236 and conserved domain: COG0203
>COG0203 RplQ Ribosomal protein L17 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=329.24 Aligned_cols=116 Identities=65% Similarity=0.961 Sum_probs=115.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 99888899999788999999999999998689378759999998864216762311387677889998725668899999
Q gi|254780236|r 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLF 80 (136)
Q Consensus 1 MrH~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf 80 (136)
T Consensus 1 Mrh~~~~rkl~rtsshR~amlrnla~sLi~he~I~TT~~KAKelr~~vEkLITlaK~~~l~~RR~a~~~l~d~~~v~kLF 80 (116)
T COG0203 1 MRHRKKGRKLGRTSSHRKAMLRNLATSLIEHERIETTLPKAKELRRVVEKLITLAKKGDLANRRLAFARLRDKDAVKKLF 80 (116)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99765678789877999999999999998738656337889999999999988850344888999998712189999999
Q ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEE
Q ss_conf 999988505877559987537899988757999952
Q gi|254780236|r 81 GIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFV 116 (136)
Q Consensus 81 ~~l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iElV 116 (136)
T Consensus 81 ~~iapry~~R~GGYtRIlK~g~R~GD~A~maiiElV 116 (116)
T COG0203 81 DEIAPRYAERNGGYTRILKLGFRRGDNAPMAIIELV 116 (116)
T ss_pred HHHCHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEC
T ss_conf 985723336899726777537888888753777729