HHsearch alignment for GI: 254780236 and conserved domain: PTZ00076
>PTZ00076 60S ribosomal protein L17; Provisional.
Probab=100.00 E-value=0 Score=293.41 Aligned_cols=125 Identities=29% Similarity=0.346 Sum_probs=117.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 88899999788999999999999998689378759999998864216762311387677889998725668899999999
Q gi|254780236|r 4 AISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLFGII 83 (136)
Q Consensus 4 ~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf~~l 83 (136)
T Consensus 16 ~R~FRKl~r~s~HR~amlRnmv~~LI~heRIeTTl~KAKElrr~AE~lItlAK~~t~~arr~a~s~lRt~e~~~KLF~el 95 (257)
T PTZ00076 16 RRLFRRAHKQPHHKWDSIKNQLNELLKYGRIETTLTKAKELQGYAEELIYLAKKDNAENNLKVESMLRTAQGRRKLYEFY 95 (257)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 77888707994155999999999998751121120768999999999999860488888999998854699999999986
Q ss_pred HHHHCCCCCCEEEEEE-CCCCCCCCCCEEEEEEECCCCCCCC-CCCH
Q ss_conf 9885058775599875-3789998875799995268866222-5402
Q gi|254780236|r 84 AKRYSDRSGGYLRIMK-RGFRYGDSAPMAVIEFVDRDLSAKG-TPVS 128 (136)
Q Consensus 84 ~prf~~R~GGYTRi~k-l~~R~gD~A~ma~iElVd~~~~~~~-~~~~ 128 (136)
T Consensus 96 ~PRYkdRpggyTRILn~~~~R~gDaAPMAyIEfVDRpGElRpAKPvg 142 (257)
T PTZ00076 96 VPLYRHRPFFFTRIINQWKLRLRDAAPLAFIEFIDRPGELRPAKPVG 142 (257)
T ss_pred HHHHCCCCCCEEHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 43540588761102443055555667604556506877636688744