HHsearch alignment of GI: 254780236 and MMDB domain: 2cqm_A_
>2cqm_A (A:) Ribosomal protein L17 isolog; alpha and beta (A+B), structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=100.00 E-value=0 Score=301.33 Aligned_cols=117 Identities=32% Similarity=0.499 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHCCHHHHHHHHHHHHHHHCCC
Q ss_conf 889999999999999986893787599999988642167623113876778--899987256688999999999885058
Q gi|254780236|r 13 TSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSL--RLAISKIGDVDVVNKLFGIIAKRYSDR 90 (136)
Q Consensus 13 ~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r--r~~~~~l~~~~~v~kLf~~l~prf~~R 90 (136)
+++||++|||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++ +++.+||.|+++++|||++|+|||++|
T Consensus 1 ~~~hR~~llrnl~t~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r~~~~~~~~l~~~~~v~KLf~~lapRy~~r 80 (122)
T 2cqm_A 1 GSSGSSGLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQ 80 (122)
T ss_dssp CCCCCSSHHHHHHHHHHHTTEEEEEHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHCCCTTHHHHHHTTHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 96589999999999999739799648999888877888888860486266788876402664889998999880798707
Q ss_pred CCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHH
Q ss_conf 775599875378999887579999526886622254025
Q gi|254780236|r 91 SGGYLRIMKRGFRYGDSAPMAVIEFVDRDLSAKGTPVSR 129 (136)
Q Consensus 91 ~GGYTRi~kl~~R~gD~A~ma~iElVd~~~~~~~~~~~~ 129 (136)
|||||||+|+|+|.||+|+||+|||||+|++++..+.++
T Consensus 81 ~GGYTRI~kl~~R~gD~A~maiiElvd~~~~~~~~~~~~ 119 (122)
T 2cqm_A 81 TGGYTRMLQIPNRSLDRAKMAVIEYKGNCLPPLPLPSGP 119 (122)
T ss_dssp CSCCEEEEEECCCSSSCCCEEEEEESSCCCCCCCCCCSS
T ss_pred CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 876689886378888878879999689989988999999