HHSEARCH alignment of GI: 254780236 and SCOP domain: d1gd8a_

Alignment
>d1gd8a_ d.188.1.1 (A:) Prokaryotic ribosomal protein L17 {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=295.09  Aligned_cols=104  Identities=51%  Similarity=0.831  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             89999999999999986893787599999988642167623113876778899987256688999999999885058775
Q gi|254780236|r   14 SSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLFGIIAKRYSDRSGG   93 (136)
Q Consensus        14 ~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf~~l~prf~~R~GG   93 (136)
                      ||||++|||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++|+++++|.|+++++|||++|+|||++||||
T Consensus         1 sshR~allrnl~t~Li~~erI~TT~~KAKelr~~~EklIt~aK~~~~~~rr~~~~~l~~~~~v~KLf~~lapry~~R~GG   80 (105)
T d1gd8a_           1 SSHRLALYRNQAKSLLTHGRITTTVPKAKELRGFVDHLIHLAKRGDLHARRLVLRDLQDVKLVRKLFDEIAPRYRDRQGG   80 (105)
T ss_dssp             CHHHHHHHHHHHHHHHHHSEEEEEHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHSCCHHHHHHHHHTHHHHTSSCCSC
T ss_pred             CHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             96899999999999997598997389998889999999998226867888899988578999999999999996157888


Q ss_pred             EEEEEECC-CCCCCCCCEEEEEEEC
Q ss_conf             59987537-8999887579999526
Q gi|254780236|r   94 YLRIMKRG-FRYGDSAPMAVIEFVD  117 (136)
Q Consensus        94 YTRi~kl~-~R~gD~A~ma~iElVd  117 (136)
                      ||||+|+| +|.||+|+||+|||||
T Consensus        81 YTRI~kl~~~R~GD~A~ma~iElVd  105 (105)
T d1gd8a_          81 YTRVLKLAERRRGDGAPLALVELVE  105 (105)
T ss_dssp             CEEEEEEEEECTTTCCEEEEEEECC
T ss_pred             EEEEEECCCCCCCCCCCEEEEEEEC
T ss_conf             6898866899999998888998329


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Prokaryotic ribosomal protein L17
superfamily: Prokaryotic ribosomal protein L17
family: Prokaryotic ribosomal protein L17
domain: Prokaryotic ribosomal protein L17
species: Thermus thermophilus [TaxId: 274]