HHSEARCH alignment of GI: 254780236 and SCOP domain: d2cqma1

Alignment
>d2cqma1 d.188.1.1 (A:28-136) Prokaryotic ribosomal protein L17 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.4e-45  Score=281.75  Aligned_cols=107  Identities=34%  Similarity=0.543  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHH--HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             99999999986893787599999988642167623113876778--8999872566889999999998850587755998
Q gi|254780236|r   20 MFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSL--RLAISKIGDVDVVNKLFGIIAKRYSDRSGGYLRI   97 (136)
Q Consensus        20 llrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~r--r~~~~~l~~~~~v~kLf~~l~prf~~R~GGYTRi   97 (136)
                      |||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++  +++.+|+.|+++++|||++|+|||+|||||||||
T Consensus         1 llrnl~tsLi~herI~TT~~KAKelr~~~ErLIt~aK~~~~~~r~~~~~~~~l~~k~~v~KLf~~lapry~~R~GGYTRI   80 (109)
T d2cqma1           1 LLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRM   80 (109)
T ss_dssp             HHHHHHHHHHHTTEEEEEHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHCCCTTHHHHHHTTHHHHHHHSCSCCEEE
T ss_pred             CHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             96899999997596996689998888768888778604861677888766325657899989998708872589876899


Q ss_pred             EECCCCCCCCCCEEEEEEECCCCCCCCCC
Q ss_conf             75378999887579999526886622254
Q gi|254780236|r   98 MKRGFRYGDSAPMAVIEFVDRDLSAKGTP  126 (136)
Q Consensus        98 ~kl~~R~gD~A~ma~iElVd~~~~~~~~~  126 (136)
                      +|+|+|.||+|+||+|||||+|+++..+|
T Consensus        81 ~kl~~R~gD~A~ma~iElv~~p~p~~~~p  109 (109)
T d2cqma1          81 LQIPNRSLDRAKMAVIEYKGNCLPPLPLP  109 (109)
T ss_dssp             EEECCCSSSCCCEEEEEESSCCCCCCCCC
T ss_pred             EECCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf             86478888888869999789989999987


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Prokaryotic ribosomal protein L17
superfamily: Prokaryotic ribosomal protein L17
family: Prokaryotic ribosomal protein L17
domain: Prokaryotic ribosomal protein L17
species: Human (Homo sapiens) [TaxId: 9606]