HHSEARCH alignment of GI: 254780236 and SCOP domain: d2zjrk1

Alignment
>d2zjrk1 d.188.1.1 (K:3-115) Prokaryotic ribosomal protein L17 {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=0  Score=314.66  Aligned_cols=113  Identities=50%  Similarity=0.741  Sum_probs=112.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf             88889999978899999999999999868937875999999886421676231138767788999872566889999999
Q gi|254780236|r    3 HAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGLHSLRLAISKIGDVDVVNKLFGI   82 (136)
Q Consensus         3 H~~~~rklgr~~~hR~allrnl~~~Li~herI~TT~~KAKelr~~aEklIt~AK~~~~~~rr~~~~~l~~~~~v~kLf~~   82 (136)
                      |+++++||||+++||++|||||+++||+||+|+||++||||+|+|+|+|||+||+|++|++|++.++|.|+++++|||++
T Consensus         1 H~~~~rklgr~~~hR~allrnl~~sLi~herI~TT~~KAKelr~~~EklIT~AK~~~~~~rr~~~~~l~~k~~v~kLf~~   80 (113)
T d2zjrk1           1 HGKAGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRLVAQDIHDKDVVRKVMDE   80 (113)
T ss_dssp             CCCCCCCCSSCTTHHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHHHHHHTTCSHHHHHHHTTSCCCHHHHHHHHHT
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             98777889978599999999999999977989977899999998888771362368725555554525668999999998


Q ss_pred             HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEE
Q ss_conf             998850587755998753789998875799995
Q gi|254780236|r   83 IAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEF  115 (136)
Q Consensus        83 l~prf~~R~GGYTRi~kl~~R~gD~A~ma~iEl  115 (136)
                      |+|||++||||||||+|+|+|.||+|+||+|||
T Consensus        81 iapry~~R~GGYTRI~kl~~R~gD~A~ma~iEL  113 (113)
T d2zjrk1          81 VAPKYAERPGGYTRILRVGTRRGDGVTMALIEL  113 (113)
T ss_dssp             HHHHTTTSCSCCCEEEECCCCTTTCCCEEEEEC
T ss_pred             HHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEC
T ss_conf             719863789886898878899999986678759


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Prokaryotic ribosomal protein L17
superfamily: Prokaryotic ribosomal protein L17
family: Prokaryotic ribosomal protein L17
domain: Prokaryotic ribosomal protein L17
species: Deinococcus radiodurans [TaxId: 1299]