RPSBLAST alignment of GI: 254780236 and protein with PDBid: 3ofq
>3ofq_N 50S ribosomal protein L17; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_N 2wwq_N 3ofr_N* 3i1n_N 1p85_L 1p86_L 1vs8_N 1vs6_N 2aw4_N 2awb_N 1vt2_N 2i2v_N 2j28_N 2i2t_N* 2qao_N* 2qba_N* 2qbc_N* 2qbe_N 2qbg_N 2qbi_N* ... Length = 120
Score = 168 bits (428), Expect = 3e-43
Identities = 69/119 (57%), Positives = 87/119 (73%)
Query: 1 MRHAISGRKLNRTSSHRKAMFSNMAASIIWHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
MRH SGR+LNR SSHR+AMF NMA S++ HE I TTLPKAKELR +VE L+TL K +
Sbjct: 1 MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSV 60
Query: 61 HSLRLAISKIGDVDVVNKLFGIIAKRYSDRSGGYLRIMKRGFRYGDSAPMAVIEFVDRD 119
+ RLA ++ D ++V KLF + R++ R+GGY RI+K GFR GD+APMA IE VDR
Sbjct: 61 ANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRS 119