HHsearch alignment for GI: 254780237 and conserved domain: PRK03773

>PRK03773 DNA-directed RNA polymerase subunit L; Provisional.
Probab=95.98  E-value=0.021  Score=35.85  Aligned_cols=51  Identities=25%  Similarity=0.306  Sum_probs=39.2

Q ss_pred             EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4422357764116887762189999993896177799999999999988876224
Q gi|254780237|r  180 IKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINF  234 (340)
Q Consensus       180 V~~Vny~Ve~~rvg~~t~~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~~  234 (340)
T Consensus        38 V~fAgY~ipHPl~~~----~~p~~rIqTdg~~~P~~aL~~A~~~li~~c~~~~e~   88 (95)
T PRK03773         38 VKFAAYTIEHPITMA----RKPRFRVVTDGKITPEKALEEAAQKIFDRAKEVLEA   88 (95)
T ss_pred             EEEEEECCCCCCCCC----CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             599985389976556----864899983899898999999999999999999999