HHsearch alignment for GI: 254780237 and conserved domain: PRK03773
>PRK03773 DNA-directed RNA polymerase subunit L; Provisional.
Probab=91.42 E-value=0.37 Score=27.76 Aligned_cols=39 Identities=31% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 78881589999616975667888999998741698306889998
Q gi|254780237|r 22 QEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAITAVQI 65 (340)
Q Consensus 22 ~~~~~~g~f~~~Ple~G~g~TlGNaLRRvLLssi~G~ait~vkI 65 (340)
T Consensus 7 ~~~~n~~ef~l~----~EDHTl~NlLr~~Ll~~-p~V~fAgY~i 45 (95)
T PRK03773 7 KKEENLLEFYLE----GEDHTFANLLTETLREN-PHVKFAAYTI 45 (95)
T ss_pred ECCCCEEEEEEE----CCCCHHHHHHHHHHHCC-CCEEEEEECC
T ss_conf 648988999992----78741789999998449-9859998538