HHsearch alignment of GI: 254780237 and MMDB domain: 1twf_K_

>1twf_K (K:) B13.6, DNA-directed RNA polymerase II 13.6 kDa polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae}
Probab=95.07  E-value=0.088  Score=31.36  Aligned_cols=48  Identities=19%  Similarity=0.314  Sum_probs=38.5

Q ss_pred             EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             442235776411688776218999999389617779999999999998887622
Q gi|254780237|r  180 IKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN  233 (340)
Q Consensus       180 V~~Vny~Ve~~rvg~~t~~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~  233 (340)
                      |.-+.|.|..      .-..+..|-|.|+|+++|.+||..|++-|.+.+..|.+
T Consensus        56 V~fagY~ipH------Pl~~~~~lrIqT~~~~~p~eal~~a~~~l~~~~~~l~~  103 (120)
T 1twf_K           56 VLFAAYKVEH------PFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKT  103 (120)
T ss_dssp             EEEEEEECSC------TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCC------CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             3386641688------88880389999699999999999999999999999999