HHsearch alignment of GI: 254780237 and MMDB domain: 1twf_K_
>1twf_K (K:) B13.6, DNA-directed RNA polymerase II 13.6 kDa polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.088 Score=31.36 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=38.5
Q ss_pred EEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 442235776411688776218999999389617779999999999998887622
Q gi|254780237|r 180 IKKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN 233 (340)
Q Consensus 180 V~~Vny~Ve~~rvg~~t~~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~ 233 (340)
|.-+.|.|.. .-..+..|-|.|+|+++|.+||..|++-|.+.+..|.+
T Consensus 56 V~fagY~ipH------Pl~~~~~lrIqT~~~~~p~eal~~a~~~l~~~~~~l~~ 103 (120)
T 1twf_K 56 VLFAAYKVEH------PFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKT 103 (120)
T ss_dssp EEEEEEECSC------TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCC------CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3386641688------88880389999699999999999999999999999999