HHsearch alignment of GI: 254780237 and MMDB domain: 1wcn_A_

>1wcn_A (A:) Transcription elongation protein NUSA; RNA-binding protein, escherichia coli NUSA, transcription regulation, regulation of RNA binding; NMR {Escherichia coli} PDB: 2jzb_B

Probab=95.70  E-value=0.024  Score=34.96  Aligned_cols=51  Identities=8%  Similarity=0.062  Sum_probs=46.7

Q ss_pred             CCCHHHHHHHHHCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             110588898988398371888744988886188988644999999999808
Q gi|254780237|r  264 ELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGTMG  314 (340)
Q Consensus       264 eLSvRs~NcLk~a~I~tigdLv~~s~~dLl~ikNfG~KSl~EI~~~L~~~g  314 (340)
                      .++....+-|..+||+|+.||...+.++|..++++|++..+.|.....+.|
T Consensus        14 Gig~~~a~~L~~aGi~TvedLa~a~~~eL~~i~Gi~~~~A~~ii~~Ar~~~   64 (70)
T 1wcn_A           14 GVDRDLAFKLAARGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNIC   64 (70)
T ss_dssp             TCCHHHHHHHHTTTCCSHHHHHTSCHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf             989999999999699759999872999997651799999999999998655