HHsearch alignment of GI: 254780237 and MMDB domain: 3h0g_C_39-170
>3h0g_C (C:39-170) DNA-directed RNA polymerase II subunit RPB3; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=93.59 E-value=0.086 Score=31.42 Aligned_cols=55 Identities=15% Similarity=0.214 Sum_probs=45.9
Q ss_pred CEEEEEEE----ECCEEEEEEEEECCC-CE-------EEECCCEEEEEECCCCEEEEEEEEECCCCC
Q ss_conf 27999999----447169963351389-85-------998888089997789649999997468763
Q gi|254780237|r 101 HKRVTIFK----RGPGVVTAGDIQTVN-DI-------EVLNPDHVICNLDVDAVVRMELTVSKGHGY 155 (340)
Q Consensus 101 ~~~~~l~~----~Gp~~vtA~Di~~p~-~v-------eivNpd~~IaTl~~~~~l~iel~ie~G~GY 155 (340)
+...+|++ .|+..|+++|+++.+ +. +-++++-.|+.|..+-.++|++...+|.|=
T Consensus 62 tv~f~L~v~~~~~~~~~V~S~dL~~~~~~~~~~~~~~~p~~~~I~I~KL~~gQ~i~l~~~a~kGiGk 128 (132)
T 3h0g_C 62 SVELFLNAKCTGEGTMEIYARDLVVSSNSSLGHPILADPKSRGPLICKLRKEQEISLRCIAKKGIAK 128 (132)
T ss_dssp SCEEEEEECCCCSSCEEEEGGGCBCCSCCSSCCBCCCSTTSCCSEEEEECSSCCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCCC
T ss_conf 6898887893577745774041662786340586443555788458970577359999999978411