HHsearch results for GI: 254780237 and protein with PDBid: 1twf_K
>1twf_K B13.6, DNA-directed RNA polymerase II 13.6 kDa polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: d.74.3.2 PDB: 1i3q_K 1i6h_K 1k83_K* 1nik_K 1nt9_K 1pqv_K 1r5u_K 1r9s_K* 1r9t_K* 1sfo_K* 1twa_K* 1twc_K* 1i50_K* 1twg_K* 1twh_K* 1wcm_K 1y1v_K 1y1w_K 1y1y_K 1y77_K* ...
Probab=90.48 E-value=0.84 Score=24.01 Aligned_cols=36 Identities=17% Similarity=0.355 Sum_probs=31.5
Q ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 218999999389617779999999999998887622
Q gi|254780237|r 198 YDKLSMTIDTDGSITGEDSVALASRILQDQLGMFIN 233 (340)
Q Consensus 198 ~dkL~lEI~TnGsi~P~eAl~~Aa~iL~~~l~~f~~ 233 (340)
.++.+|-|.|+++.+|.+||..|++-|++.+..+..
T Consensus 68 ~~~i~lrI~t~~~~~p~~~l~~a~~~l~~~~~~i~~ 103 (120)
T 1twf_K 68 FARFKLRIQTTEGYDPKDALKNACNSIINKLGALKT 103 (120)
T ss_dssp SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 781279999699999999999999999999999999