BLAST/PSIBLAST alignment of GI: 254780237 and GI: 15965133 at iteration 1
>gi|15965133|ref|NP_385486.1| DNA-directed RNA polymerase subunit alpha [Sinorhizobium meliloti 1021] Length = 336
>gi|150396231|ref|YP_001326698.1| DNA-directed RNA polymerase subunit alpha [Sinorhizobium medicae WSM419] Length = 336
>gi|307314383|ref|ZP_07593989.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium meliloti BL225C] Length = 336
>gi|307322095|ref|ZP_07601471.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium meliloti AK83] Length = 336
>gi|20139518|sp|Q925Z2|RPOA_RHIME RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha Length = 336
>gi|166229280|sp|A6U883|RPOA_SINMW RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha Length = 336
>gi|15074313|emb|CAC45959.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium meliloti 1021] Length = 336
>gi|16588802|gb|AAL26901.1| RNA polymerase alpha-subunit [Sinorhizobium meliloti] Length = 336
>gi|150027746|gb|ABR59863.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium medicae WSM419] Length = 336
>gi|306892277|gb|EFN23087.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium meliloti AK83] Length = 336
>gi|306899081|gb|EFN29723.1| DNA-directed RNA polymerase, alpha subunit [Sinorhizobium meliloti BL225C] Length = 336
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/339 (69%), Positives = 284/339 (83%), Gaps = 4/339 (1%)
Query: 1 MIQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAI 60
MIQKNWQELIKPN +E+ G+ + ++AEPL RGF TLGNALRRVL+SSLRGAA+
Sbjct: 1 MIQKNWQELIKPNKVEFASSGR---TKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAV 57
Query: 61 TAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQ 120
TAVQIDGVLHE SSI GV ED+TDI+LNIK I +KM GD KR+ + K+GPGVVTAGDIQ
Sbjct: 58 TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQ 117
Query: 121 TVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPI 180
TV DIE+LNP+HVIC LD A +RME TV+ G GYVPA +R+E+ PIGLI +D+LYSP+
Sbjct: 118 TVGDIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPV 177
Query: 181 KKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKE 240
KKVSY VE+ REGQVLDYDKL+M+I+TDGS+TGED++A A+RILQDQL +F+NF+EP+KE
Sbjct: 178 KKVSYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFDEPQKE 237
Query: 241 VKEDINVKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGR 300
+E+ V L FNPALLKKV+ELELSVRS NCL+ +NIVY+GDLIQ+TEA+MLR NFGR
Sbjct: 238 TEEEA-VTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGR 296
Query: 301 KSLVEIKGVLGTMGLFLGMNLPDWPPESIEELAKKYEDK 339
KSL EIK VL +MGL LGM +P WPPE+IE+LAK+YED+
Sbjct: 297 KSLNEIKEVLASMGLHLGMEVPSWPPENIEDLAKRYEDQ 335