BLAST/PSIBLAST alignment of GI: 254780237 and GI: 222085699 at iteration 1

>gi|222085699|ref|YP_002544229.1| DNA-directed RNA polymerase, alpha subunit [Agrobacterium radiobacter K84] Length = 336
>gi|254765239|sp|B9JDV2|RPOA_AGRRK RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha Length = 336
>gi|221723147|gb|ACM26303.1| DNA-directed RNA polymerase, alpha subunit [Agrobacterium radiobacter K84] Length = 336

 Score =  495 bits (1274), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/339 (70%), Positives = 285/339 (84%), Gaps = 4/339 (1%)

Query: 1   MIQKNWQELIKPNNIEYIVLGQEEENRTLMIAEPLPRGFAHTLGNALRRVLMSSLRGAAI 60
           MIQKNWQELIKPN +E+   G+    +  ++AEPL RGF  TLGNALRRVL+SSLRGAA+
Sbjct: 1   MIQKNWQELIKPNKVEFTSSGR---TKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAV 57

Query: 61  TAVQIDGVLHEISSIKGVHEDLTDIILNIKGINLKMSGDSHKRVTIFKRGPGVVTAGDIQ 120
           TAVQIDGVLHE SSI GV ED+TDI+LNIK I +KM GD  KR+ + K+GPGVVTAGDIQ
Sbjct: 58  TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQ 117

Query: 121 TVNDIEVLNPDHVICNLDVDAVVRMELTVSKGHGYVPAKHHRTENDPIGLITIDALYSPI 180
           TV DIE+LNP+HVIC LD  A +RME TV+ G GYVPA+ +R E+ PIGLI +D+LYSP+
Sbjct: 118 TVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPV 177

Query: 181 KKVSYTVESAREGQVLDYDKLSMTIDTDGSITGEDSVALASRILQDQLGMFINFEEPKKE 240
           KKVSY VE+ REGQVLDYDKLSM+I+TDGSITGED+VA A+RILQDQLG+F+NF+EP+KE
Sbjct: 178 KKVSYKVENTREGQVLDYDKLSMSIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKE 237

Query: 241 VKEDINVKSLPFNPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGR 300
            +E+  V  L FNPALLKKV+ELELSVRS NCL+ +NIVY+GDLIQ+TEA+MLR  NFGR
Sbjct: 238 AEEEA-VTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGR 296

Query: 301 KSLVEIKGVLGTMGLFLGMNLPDWPPESIEELAKKYEDK 339
           KSL EIK VL +MGL LGM +P WPPE+IE+LAK+YED+
Sbjct: 297 KSLNEIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQ 335