RPSBLAST alignment of GI: 254780237 and SCOP domain: d1doqa_

Alignment

>d1doqa_ a.60.3.1 (A:) C-terminal domain of RNA polymerase alpha subunit {Thermus thermophilus [TaxId: 274]} Length = 69

 Score = 87.4 bits (217), Expect = 1e-18
 Identities = 21/65 (32%), Positives = 29/65 (44%)

Query: 253 NPALLKKVEELELSVRSTNCLRGENIVYMGDLIQRTEADMLRMANFGRKSLVEIKGVLGT 312
              L   +EEL LS R  + L+ E I  +  L+     D+  +   G +SL EIK  L  
Sbjct: 3   EEELDLPLEELGLSTRVLHSLKEEGIESVRALLALNLKDLKNIPGIGERSLEEIKEALEK 62

Query: 313 MGLFL 317
            G  L
Sbjct: 63  KGFTL 67

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: C-terminal domain of RNA polymerase alpha subunit
family: C-terminal domain of RNA polymerase alpha subunit
domain: C-terminal domain of RNA polymerase alpha subunit
species: Thermus thermophilus [TaxId: 274]