HHsearch alignment for GI: 254780238 and conserved domain: PRK05593
>PRK05593 rplR 50S ribosomal protein L18; Reviewed.
Probab=97.17 E-value=0.0039 Score=40.07 Aligned_cols=86 Identities=23% Similarity=0.240 Sum_probs=62.9
Q ss_pred CCEEEEEEECCCCEEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC---C
Q ss_conf 5218999917987799997089-98899740444355775433520378999999999998698199999977998---6
Q gi|254780238|r 17 VSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA---G 92 (129)
Q Consensus 17 ~~GiihI~~t~NNTiitlTd~~-Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~---G 92 (129)
T Consensus 24 ~rpRL~VfrSnkhiyaQiIDD~~~~tl~saST~~k~~~~--~~n~~~A~~vG~~ia~~a~~~~I~~v-~FDR~-g~~YHG 99 (115)
T PRK05593 24 ERPRLSVFRSNRHIYAQVIDDVKGKTLASASTLEKDLKA--GGNKEAAKKVGKLIAERAKAKGIKQV-VFDRG-GYKYHG 99 (115)
T ss_pred CCCEEEEEECCCEEEEEEEECCCCCEEEEEECCCHHHHC--CCCHHHHHHHHHHHHHHHHHCCCCEE-EECCC-CCCCCH
T ss_conf 986799996088279999986999799997414244416--88499999999999999998799889-98189-984223
Q ss_pred HHHH-HHHHHHCCCE
Q ss_conf 7888-7787636936
Q gi|254780238|r 93 RDSA-LRALRAIGFT 106 (129)
Q Consensus 93 R~~~-ik~l~~~glk 106 (129)
T Consensus 100 rvkalAd~aRe~Gl~ 114 (115)
T PRK05593 100 RVKALADAAREAGLK 114 (115)
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 999999999984899