HHsearch alignment for GI: 254780238 and conserved domain: PRK08569

>PRK08569 rpl18p 50S ribosomal protein L18P; Reviewed.
Probab=95.81  E-value=0.099  Score=31.48  Aligned_cols=100  Identities=25%  Similarity=0.306  Sum_probs=73.2

Q ss_pred             EEEEEECCCCEEEEEEC--CCCC-EEEEECCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE--ECC--
Q ss_conf             89999179877999970--8998-89974044---43557754335203789999999999986981999999--779--
Q gi|254780238|r   20 RAHVVSTFNNTRITITD--PHGN-TIAWSSPK---VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--SGL--   89 (129)
Q Consensus        20 iihI~~t~NNTiitlTd--~~Gn-~i~~~S~G---~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~i--kG~--   89 (129)
T Consensus        34 R~VVR~TN~~ii~Qiv~~~~~GD~v~~sa~s~eL~kyG~k~~~~N~p-AaYltGlL~gkral~~G~~eaiLDiGL~~~t~  112 (193)
T PRK08569         34 RLVVRKTNKHVIAQIVKYDPKGDRTLASAHSKELAKYGWKGDTGNTP-AAYLTGLLAGKKALKAGVEEAVLDIGLHRPTK  112 (193)
T ss_pred             EEEEEECCCCEEEEEEEEECCCCEEEEEEEHHHHHHCCCCCCCCCCH-HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf             59999738847999998607898999997652375568478877208-99998999999999749763798405664655


Q ss_pred             CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             9867888778763693699999638898888688886789
Q gi|254780238|r   90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI  129 (129)
Q Consensus        90 G~GR~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi  129 (129)
T Consensus       113 G~rvfaalKGavDaGl~---------IPh~e~~fP~~dRi  143 (193)
T PRK08569        113 GSRVFAALKGAVDAGLE---------VPHGEEVLPDEDRI  143 (193)
T ss_pred             CCCHHHHHHCCCCCCCC---------CCCCCCCCCCHHHC
T ss_conf             62068866323245611---------67987768863231