HHsearch alignment for GI: 254780238 and conserved domain: PRK08569
>PRK08569 rpl18p 50S ribosomal protein L18P; Reviewed.
Probab=95.81 E-value=0.099 Score=31.48 Aligned_cols=100 Identities=25% Similarity=0.306 Sum_probs=73.2
Q ss_pred EEEEEECCCCEEEEEEC--CCCC-EEEEECCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE--ECC--
Q ss_conf 89999179877999970--8998-89974044---43557754335203789999999999986981999999--779--
Q gi|254780238|r 20 RAHVVSTFNNTRITITD--PHGN-TIAWSSPK---VVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV--SGL-- 89 (129)
Q Consensus 20 iihI~~t~NNTiitlTd--~~Gn-~i~~~S~G---~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~i--kG~-- 89 (129)
T Consensus 34 R~VVR~TN~~ii~Qiv~~~~~GD~v~~sa~s~eL~kyG~k~~~~N~p-AaYltGlL~gkral~~G~~eaiLDiGL~~~t~ 112 (193)
T PRK08569 34 RLVVRKTNKHVIAQIVKYDPKGDRTLASAHSKELAKYGWKGDTGNTP-AAYLTGLLAGKKALKAGVEEAVLDIGLHRPTK 112 (193)
T ss_pred EEEEEECCCCEEEEEEEEECCCCEEEEEEEHHHHHHCCCCCCCCCCH-HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 59999738847999998607898999997652375568478877208-99998999999999749763798405664655
Q ss_pred CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 9867888778763693699999638898888688886789
Q gi|254780238|r 90 GAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129 (129)
Q Consensus 90 G~GR~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi 129 (129)
T Consensus 113 G~rvfaalKGavDaGl~---------IPh~e~~fP~~dRi 143 (193)
T PRK08569 113 GSRVFAALKGAVDAGLE---------VPHGEEVLPDEDRI 143 (193)
T ss_pred CCCHHHHHHCCCCCCCC---------CCCCCCCCCCHHHC
T ss_conf 62068866323245611---------67987768863231