HHsearch alignment of GI: 254780238 and MMDB domain: 1ovy_A_

>1ovy_A (A:) 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus}
Probab=97.16  E-value=0.00051  Score=45.05  Aligned_cols=92  Identities=21%  Similarity=0.178  Sum_probs=74.9

Q ss_pred             CCCEEEEEEECCCCEEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC-CH
Q ss_conf             25218999917987799997089-98899740444355775433520378999999999998698199999977998-67
Q gi|254780238|r   16 IVSGRAHVVSTFNNTRITITDPH-GNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKVSGLGA-GR   93 (129)
Q Consensus        16 i~~GiihI~~t~NNTiitlTd~~-Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG~G~-GR   93 (129)
                      .....+-|..|..++...+.|.. |.+++.+|+=.-.++.......-||+.+++.+++++.+.|+..+..-..|+=+ ||
T Consensus        26 ~~~pRL~V~~Snk~i~aqvvd~~~~~~lasaSt~ek~~~~~~~~n~~aa~~iG~~la~r~~~~gi~~v~~Drg~~~~~gr  105 (120)
T 1ovy_A           26 TERPRLSVFRSNKHIYAQIIDDTKSATIVSASTLDKEFGLDSTNNIEAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGR  105 (120)
T ss_dssp             SSCCSEEEEEETTEEEEEEECCSSCCCEEEESTTSTTTCSSCTTSHHHHHHHHHHHHHHHHHHSSSCCCCCSTTCSSCSS
T ss_pred             CCCCEEEEEEECCEEEEEEEECCCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
T ss_conf             89876999982782699999478894899824523443334688599999999999999998699889980799973179


Q ss_pred             -HHHHHHHHHCCCEE
Q ss_conf             -88877876369369
Q gi|254780238|r   94 -DSALRALRAIGFTI  107 (129)
Q Consensus        94 -~~~ik~l~~~glkI  107 (129)
                       .+++.++...||++
T Consensus       106 v~a~~~~~re~Gl~~  120 (120)
T 1ovy_A          106 VKALADAAREAGLEF  120 (120)
T ss_dssp             THHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHCCCCC
T ss_conf             999999999808889