HHsearch alignment of GI: 254780238 and MMDB domain: 3bbn_K_

>3bbn_K (K:) Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00  E-value=1.4e-45  Score=300.99  Aligned_cols=123  Identities=41%  Similarity=0.735  Sum_probs=118.8

Q ss_pred             CCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             43343001225218999917987799997089988997404443557754335203789999999999986981999999
Q gi|254780238|r    7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV   86 (129)
Q Consensus         7 ~~~~k~~~~i~~GiihI~~t~NNTiitlTd~~Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~i   86 (129)
                      ...++.++.++.|++||++|+|||||||||++||+++|+|+|++||+|++|+|+|||+++++.++++|+++||+.|+|++
T Consensus        18 ~~~~~~~~~~~~giihI~~t~NNT~itlTd~~g~~~~~~S~G~~gfk~~~k~t~~Aa~~~a~~~~~k~~~~gi~~v~i~~   97 (140)
T 3bbn_K           18 SRKSASARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMI   97 (140)
T ss_dssp             -----CCCCCCCCEEEEEECSSCEEEEEECSSSCEEEEEETTTSSCCTTSCSSHHHHHHHHTSGGGTSTTTCCCEEEEEE
T ss_pred             CCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_conf             23135442155459999904797899996599998999834322446755341757999999999999980982999999


Q ss_pred             ECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             7799867888778763693699999638898888688886789
Q gi|254780238|r   87 SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI  129 (129)
Q Consensus        87 kG~G~GR~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi  129 (129)
                      +|+|+||++++++|...|++|.+|+|+||+|||||||||+|||
T Consensus        98 kG~G~gr~~~i~~l~~~gl~I~~I~D~T~ip~nGcR~~K~RRi  140 (140)
T 3bbn_K           98 KGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV  140 (140)
T ss_dssp             ESCSTTSSHHHHHHHTTTCEEEEEEECCCCCCSCCCCCCCCCC
T ss_pred             ECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             4477873464101014898788999899999999898989899