HHsearch alignment of GI: 254780238 and MMDB domain: 3bbn_K_
>3bbn_K (K:) Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=1.4e-45 Score=300.99 Aligned_cols=123 Identities=41% Similarity=0.735 Sum_probs=118.8
Q ss_pred CCCCCEEEECCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 43343001225218999917987799997089988997404443557754335203789999999999986981999999
Q gi|254780238|r 7 RIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSPFAAQVATDDCSAKAQNHGMSSLEVKV 86 (129)
Q Consensus 7 ~~~~k~~~~i~~GiihI~~t~NNTiitlTd~~Gn~i~~~S~G~~gfkg~kk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~i 86 (129)
...++.++.++.|++||++|+|||||||||++||+++|+|+|++||+|++|+|+|||+++++.++++|+++||+.|+|++
T Consensus 18 ~~~~~~~~~~~~giihI~~t~NNT~itlTd~~g~~~~~~S~G~~gfk~~~k~t~~Aa~~~a~~~~~k~~~~gi~~v~i~~ 97 (140)
T 3bbn_K 18 SRKSASARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMI 97 (140)
T ss_dssp -----CCCCCCCCEEEEEECSSCEEEEEECSSSCEEEEEETTTSSCCTTSCSSHHHHHHHHTSGGGTSTTTCCCEEEEEE
T ss_pred CCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_conf 23135442155459999904797899996599998999834322446755341757999999999999980982999999
Q ss_pred ECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 7799867888778763693699999638898888688886789
Q gi|254780238|r 87 SGLGAGRDSALRALRAIGFTIVSICDVTMIAHNGCRPRKRRRI 129 (129)
Q Consensus 87 kG~G~GR~~~ik~l~~~glkI~~I~D~T~ip~nGcRp~K~RRi 129 (129)
+|+|+||++++++|...|++|.+|+|+||+|||||||||+|||
T Consensus 98 kG~G~gr~~~i~~l~~~gl~I~~I~D~T~ip~nGcR~~K~RRi 140 (140)
T 3bbn_K 98 KGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV 140 (140)
T ss_dssp ESCSTTSSHHHHHHHTTTCEEEEEEECCCCCCSCCCCCCCCCC
T ss_pred ECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 4477873464101014898788999899999999898989899