HHsearch results for GI: 254780238 and protein with PDBid: 3ofq_O
>3ofq_O 50S ribosomal protein L18; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_O 2wwq_O 3ofr_O* 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O 2i2v_O 2j28_O 2i2t_O* 2qao_O* 2qba_O* 2qbc_O* 2qbe_O 2qbg_O 2qbi_O* ...
Probab=93.49 E-value=0.0031 Score=39.31 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=61.0
Q ss_pred EEEEEEECCCCEEEEEECC-CCCEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC-CCC-CH
Q ss_conf 1899991798779999708-99889974044435577543--3520378999999999998698199999977-998-67
Q gi|254780238|r 19 GRAHVVSTFNNTRITITDP-HGNTIAWSSPKVVGFSGSRK--NSPFAAQVATDDCSAKAQNHGMSSLEVKVSG-LGA-GR 93 (129)
Q Consensus 19 GiihI~~t~NNTiitlTd~-~Gn~i~~~S~G~~gfkg~kk--~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG-~G~-GR 93 (129)
.-+.|+-|.+|....+.|. .|.+|..+|+=...++...+ ..-.||..+++.+++++++.||..|.. =+| +=. ||
T Consensus 23 pRL~V~rSnkhiyaQiIdd~~~~tl~saST~~k~~~~~~~~~~n~~aA~~vG~~la~ra~~~gI~~v~f-Dr~g~~yhGr 101 (116)
T 3ofq_O 23 TRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSF-DRSGFQYHGR 101 (116)
T ss_dssp CEECCCEETTEECCBEECTTSSCCCCBCCSSSHHHHTTCSCSSSTTHHHHTHHHHHHHHHHHTCCCCCC-CCTTSCTTST
T ss_pred CEEEEEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCCCHHH
T ss_conf 759999708818999997799968999873244443212678777899999999999999869999997-6898773269
Q ss_pred -HHHHHHHHHCCCE
Q ss_conf -8887787636936
Q gi|254780238|r 94 -DSALRALRAIGFT 106 (129)
Q Consensus 94 -~~~ik~l~~~glk 106 (129)
.++.-++...||+
T Consensus 102 vkalad~~Re~Gl~ 115 (116)
T 3ofq_O 102 VQALADAAREAGLQ 115 (116)
T ss_dssp TTTTSSTTTSSSCC
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999999982888