HHsearch results for GI: 254780238 and protein with PDBid: 3ofq_O

>3ofq_O 50S ribosomal protein L18; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 3fik_O 2wwq_O 3ofr_O* 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O 2i2v_O 2j28_O 2i2t_O* 2qao_O* 2qba_O* 2qbc_O* 2qbe_O 2qbg_O 2qbi_O* ...
Probab=93.49  E-value=0.0031  Score=39.31  Aligned_cols=87  Identities=17%  Similarity=0.182  Sum_probs=61.0

Q ss_pred             EEEEEEECCCCEEEEEECC-CCCEEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC-CCC-CH
Q ss_conf             1899991798779999708-99889974044435577543--3520378999999999998698199999977-998-67
Q gi|254780238|r   19 GRAHVVSTFNNTRITITDP-HGNTIAWSSPKVVGFSGSRK--NSPFAAQVATDDCSAKAQNHGMSSLEVKVSG-LGA-GR   93 (129)
Q Consensus        19 GiihI~~t~NNTiitlTd~-~Gn~i~~~S~G~~gfkg~kk--~t~~Aa~~~a~~~~~~~~~~gi~~v~v~ikG-~G~-GR   93 (129)
                      .-+.|+-|.+|....+.|. .|.+|..+|+=...++...+  ..-.||..+++.+++++++.||..|.. =+| +=. ||
T Consensus        23 pRL~V~rSnkhiyaQiIdd~~~~tl~saST~~k~~~~~~~~~~n~~aA~~vG~~la~ra~~~gI~~v~f-Dr~g~~yhGr  101 (116)
T 3ofq_O           23 TRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSF-DRSGFQYHGR  101 (116)
T ss_dssp             CEECCCEETTEECCBEECTTSSCCCCBCCSSSHHHHTTCSCSSSTTHHHHTHHHHHHHHHHHTCCCCCC-CCTTSCTTST
T ss_pred             CEEEEEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCCCHHH
T ss_conf             759999708818999997799968999873244443212678777899999999999999869999997-6898773269


Q ss_pred             -HHHHHHHHHCCCE
Q ss_conf             -8887787636936
Q gi|254780238|r   94 -DSALRALRAIGFT  106 (129)
Q Consensus        94 -~~~ik~l~~~glk  106 (129)
                       .++.-++...||+
T Consensus       102 vkalad~~Re~Gl~  115 (116)
T 3ofq_O          102 VQALADAAREAGLQ  115 (116)
T ss_dssp             TTTTSSTTTSSSCC
T ss_pred             HHHHHHHHHHCCCC
T ss_conf             99999999982888