PSIBLAST alignment of GI: 254780238 and protein with PDB id: 1vs5
gi|116666558|pdb|1VS5|K Chain K, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 129
>gi|116666610|pdb|1VS7|K Chain K, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 129
Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats.
Identities = 67/129 (51%), Positives = 89/129 (68%)
Query: 1 MPKSPSRIRNRERKNIVSGRAHVVSTFNNTRITITDPHGNTIAWSSPKVVGFSGSRKNSP 60
M K+P R R R RK + G AH+ ++FNNT +TITD GN + W++ GF GSRK++P
Sbjct: 1 MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query: 61 FAAQVATDDCSAKAQNHGMSSLEVKVSGLGAGRDSALRALRAIGFTIVSICDVTMIAHNG 120
FAAQVA + C+ + +G+ +LEV V G G GR+S +RAL A GF I +I DVT I HNG
Sbjct: 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query: 121 CRPRKRRRI 129
CRP K+RR+
Sbjct: 121 CRPPKKRRV 129