HHsearch alignment for GI: 254780239 and conserved domain: CHL00137
>CHL00137 rps13 ribosomal protein S13; Validated.
Probab=100.00 E-value=0 Score=316.88 Aligned_cols=122 Identities=57% Similarity=0.919 Sum_probs=119.5
Q ss_pred CCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 94551675899857666431200717689999999808882120022798999999986124564333788999999999
Q gi|254780239|r 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 (122)
Q Consensus 1 mvrI~g~~i~~~K~i~~aLt~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~~~~i~~~L~~~~~~~i~r 80 (122)
T Consensus 1 MvrI~g~~i~~~K~v~~aLt~I~GIG~~~A~~Ic~~lgi~~~~k~~~Ls~~qi~~i~~~i~~~~~ie~dLr~~~~~dI~r 80 (122)
T CHL00137 1 MVRIAGVDLPRNKRIEIALTYIYGIGLTSAKKILEKANIDPDTRTKDLTDEQIVSIRQIIEENYQVEGDLRRFESMNIKR 80 (122)
T ss_pred CCEECCCCCCCCCEEEEHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEECHHHHHHHHHHHHH
T ss_conf 96484767999977313111000618999999999849898855262999999999999984765222789999998999
Q ss_pred HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 973031001233179878770778776577776655423469
Q gi|254780239|r 81 LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 (122)
Q Consensus 81 l~~i~syrG~RH~~gLpvRGQRT~tn~rt~k~~~~~~~~kkk 122 (122)
T Consensus 81 l~~I~sYRG~RH~~GLPvRGQRT~tNarT~kg~~~~v~~kKk 122 (122)
T CHL00137 81 LMEINCYRGKRHRLGLPVRGQRTRTNARTRRGAKKTVAGKKK 122 (122)
T ss_pred HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 988560147665059987877887787678898776777889