HHsearch alignment for GI: 254780239 and conserved domain: KOG3311

>KOG3311 consensus.
Probab=99.96  E-value=1.9e-30  Score=210.45  Aligned_cols=119  Identities=35%  Similarity=0.582  Sum_probs=112.0

Q ss_pred             CCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCC------------------
Q ss_conf             94551675899857666431200717689999999808882120022798999999986124------------------
Q gi|254780239|r    1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ------------------   62 (122)
Q Consensus         1 mvrI~g~~i~~~K~i~~aLt~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~------------------   62 (122)
T Consensus        12 i~~il~~~~dg~~~V~fAl~~i~Gig~~~A~~ic~K~~~~~~~r~gelt~~qi~~i~~i~~d~~~~~~~~~~l~rq~~~~   91 (152)
T KOG3311          12 ILRILNTNVDGKRKVTFALTSIKGIGRRYAEIVCKKADLDLTKRAGELTEEQILRILQILNDPRQYKIPDWFLNRQKDII   91 (152)
T ss_pred             HHHHHCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCC
T ss_conf             99997268789800689888886511224444442037405554131249999999998619877418218877423200


Q ss_pred             ----CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----564333788999999999973031001233179878770778776577776655423469
Q gi|254780239|r   63 ----DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR  122 (122)
Q Consensus        63 ----~~~i~~~L~~~~~~~i~rl~~i~syrG~RH~~gLpvRGQRT~tn~rt~k~~~~~~~~kkk  122 (122)
T Consensus        92 dG~~~~l~~~~ld~r~r~~ieRlkki~~~RG~rh~~gl~vRGQ~Tkt~~~~gk~v---~Vs~Kk  152 (152)
T KOG3311          92 DGKVNHLLGNGLDTRLRADIERLKKIRCHRGLRHFWGLRVRGQRTKTNGRRGKTV---GVSGKK  152 (152)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCEE---EECCCC
T ss_conf             4730222010256678999998764010334011148842486453445455254---410369