HHsearch alignment of GI: 254780239 and MMDB domain: 2zkq_m_1-88

>2zkq_m (m:1-88) 40S ribosomal protein S18E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1h_M

Probab=99.81  E-value=3e-21  Score=153.03  Aligned_cols=73  Identities=23%  Similarity=0.342  Sum_probs=70.1

Q ss_pred             CCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHH---HHHH
Q ss_conf             945516758998576664312007176899999998088821200227989999999861245643337---8899
Q gi|254780239|r    1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD---LRRT   73 (122)
Q Consensus         1 mvrI~g~~i~~~K~i~~aLt~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~~~~i~~~---L~~~   73 (122)
                      ||||+|+|||++|+|.+|||+|||||+++|.+||+++||||++++++||++|+++|+++|+++|.+|+|   |+|.
T Consensus        12 mvrI~g~~l~~~K~i~~ALt~I~GIG~~~A~~Ic~~lgi~~~~k~~~Lt~~qi~~l~~~i~~~~~~e~p~w~l~R~   87 (88)
T 2zkq_m           12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQ   87 (88)
T ss_dssp             -CCCSTTCCCCSSBHHHHGGGSTTCCHHHHHHHHHHHTCCTTSBTTTSCHHHHHHHHHHHHTTCSCCSCCCSSCSS
T ss_pred             HHHCCCCCCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCC
T ss_conf             2421384189996873603024662899999999982999543336399999999999984000203637776151