HHsearch results for GI: 254780239 and protein with PDBid: 1k82_A

>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8

Probab=96.27  E-value=0.0043  Score=39.40  Aligned_cols=48  Identities=19%  Similarity=0.208  Sum_probs=40.7

Q ss_pred             EEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHC
Q ss_conf             766643---120071768999999980888212002279899999998612
Q gi|254780239|r   14 RVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE   61 (122)
Q Consensus        14 ~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~   61 (122)
                      .|.-+|   ..|-|||...+..||..++|+|..++++|+++|+..|-+.+.
T Consensus       152 ~ik~~LlDQ~~iaGIGN~y~~EiLf~a~IhP~~~~~~L~~~e~~~L~~~~~  202 (268)
T 1k82_A          152 AIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIK  202 (268)
T ss_dssp             BHHHHHTCTTTCSSCCHHHHHHHHHHHTCCTTSBGGGCCHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH
T ss_conf             541488617604667588999999872798668632399999999999999