HHsearch results for GI: 254780239 and protein with PDBid: 2vqe_M
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=100.00 E-value=0 Score=311.47 Aligned_cols=122 Identities=59% Similarity=0.919 Sum_probs=117.9
Q ss_pred CCEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 94551675899857666431200717689999999808882120022798999999986124564333788999999999
Q gi|254780239|r 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 (122)
Q Consensus 1 mvrI~g~~i~~~K~i~~aLt~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~~~~i~~~L~~~~~~~i~r 80 (122)
|+||+|+|||++|+|.+|||+|||||+++|.+||+.+||||++++++||++|+++|+++|+++|.+|+||++.+.+||+|
T Consensus 1 M~RI~g~~i~~~K~v~~aLt~I~GIG~~~A~~Ic~~lGId~~~kvg~Lt~~qi~~l~~~i~~~~~i~~~L~~~~~~~i~r 80 (126)
T 2vqe_M 1 MARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKR 80 (126)
T ss_dssp -CCCSTTCCCCSSBHHHHHTTSSSCCSHHHHHHTTTTTCCTTSBGGGCCHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCCEEEEEECCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 97265744899978787620434838999999999859796630163999999999999831451147899999998999
Q ss_pred HHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 973031001233179878770778776577776655423469
Q gi|254780239|r 81 LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 (122)
Q Consensus 81 l~~i~syrG~RH~~gLpvRGQRT~tn~rt~k~~~~~~~~kkk 122 (122)
|++|+||||+||.+|||||||||||||||+|+..+++.++||
T Consensus 81 l~~i~syrG~RH~~gLpvRGQrT~tn~rt~kg~~~~~~~kk~ 122 (126)
T 2vqe_M 81 LMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKK 122 (126)
T ss_dssp HHHTTCHHHHHHHTTCCSSSCCCSSCCHHHHCSCCCCCCCCS
T ss_pred HHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 887431212334069987777787775567888553555667