HHSEARCH alignment of GI: 254780239 and SCOP domain: d1k82a1

Alignment
>d1k82a1 a.156.1.2 (A:129-216) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=96.70  E-value=0.00093  Score=42.02  Aligned_cols=51  Identities=18%  Similarity=0.193  Sum_probs=42.7

Q ss_pred             CCEEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf             85766643---1200717689999999808882120022798999999986124
Q gi|254780239|r   12 AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ   62 (122)
Q Consensus        12 ~K~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I~~   62 (122)
                      +.+|.-+|   ..|-|||...+..||..++|+|+.++.+|+++|+..|-+.+..
T Consensus        22 ~~~ik~~LlDQ~~iaGiGN~y~~EiLf~a~I~P~~~~~~L~~~~~~~L~~~i~~   75 (88)
T d1k82a1          22 KTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKA   75 (88)
T ss_dssp             CSBHHHHHTCTTTCSSCCHHHHHHHHHHHTCCTTSBGGGCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHH
T ss_conf             851899997053335521189999999977885681877899999999999999


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Middle domain of MutM-like DNA repair proteins
domain: DNA repair protein MutM (Fpg)
species: Escherichia coli [TaxId: 562]