HHSEARCH alignment of GI: 254780239 and SCOP domain: d1tdha1

Alignment
>d1tdha1 a.156.1.2 (A:132-246) Endonuclease VIII-like 1 (NEIL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.69  E-value=0.02  Score=33.71  Aligned_cols=49  Identities=22%  Similarity=0.363  Sum_probs=40.3

Q ss_pred             CCEEEEEE---EEEECCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf             85766643---12007176899999998088821200227989999999861
Q gi|254780239|r   12 AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI   60 (122)
Q Consensus        12 ~K~i~~aL---t~I~GIG~~~A~~Ic~~lgId~~~kv~~Lt~~qi~~l~~~I   60 (122)
                      +++|.-+|   ..|-|||...+..||..++|+|..++.+|++++...+....
T Consensus        27 ~~~i~~~LldQ~~~aGiGN~~~~EiLf~a~i~P~~~~~~l~~~~~~~l~~~~   78 (115)
T d1tdha1          27 DRPICEALLDQRFFNGIGNYLRAEILYRLKIPPFEKARSVLEALQQHRPSPE   78 (115)
T ss_dssp             GSBHHHHTTCTTTSTTCCHHHHHHHHHHHTCCTTSBHHHHHGGGC-----CC
T ss_pred             CCCHHHHHHCCCHHCCCCHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf             8849999854643125138999999998489977704043899996777667


SCOP domain information

class: All alpha proteins
fold: S13-like H2TH domain
superfamily: S13-like H2TH domain
family: Middle domain of MutM-like DNA repair proteins
domain: Endonuclease VIII-like 1 (NEIL1)
species: Human (Homo sapiens) [TaxId: 9606]