BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str. psy62] (122 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str. psy62] gi|254039916|gb|ACT56712.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str. psy62] Length = 122 Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI Sbjct: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR Sbjct: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Query: 121 KR 122 KR Sbjct: 121 KR 122 >gi|315122796|ref|YP_004063285.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496198|gb|ADR52797.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 123 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 101/117 (86%), Positives = 104/117 (88%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVVRALCYIHGIGFKSSQDICNKL I PERRVH LVESE+I+IRQAI Sbjct: 1 MARIAGVNIPSTKRVVRALCYIHGIGFKSSQDICNKLGISPERRVHHLVESEIIKIRQAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 EQ YQVEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNA TRK+ GKGG Sbjct: 61 EQTYQVEGDLRRMTVMNIKRLMDLGCYRGLRHRRNLPVRGQRTRTNACTRKRSGKGG 117 >gi|241204187|ref|YP_002975283.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858077|gb|ACS55744.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 122 Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGSKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|190891377|ref|YP_001977919.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652] gi|226712781|sp|B3PWU3|RS13_RHIE6 RecName: Full=30S ribosomal protein S13 gi|190696656|gb|ACE90741.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652] Length = 122 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|209548957|ref|YP_002280874.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|218674113|ref|ZP_03523782.1| 30S ribosomal protein S13 [Rhizobium etli GR56] gi|218679851|ref|ZP_03527748.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 894] gi|226712782|sp|B5ZZ55|RS13_RHILW RecName: Full=30S ribosomal protein S13 gi|209534713|gb|ACI54648.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 122 Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|116251562|ref|YP_767400.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. viciae 3841] gi|158706271|sp|Q1MIB9|RS13_RHIL3 RecName: Full=30S ribosomal protein S13 gi|115256210|emb|CAK07291.1| putative 30S ribosomal protein S13 (BS14) [Rhizobium leguminosarum bv. viciae 3841] Length = 122 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVAKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159184981|ref|NP_354901.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58] gi|32363355|sp|Q8UE39|RS13_AGRT5 RecName: Full=30S ribosomal protein S13 gi|159140257|gb|AAK87686.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58] Length = 122 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/122 (73%), Positives = 104/122 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ IP E+RVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGIPAEKRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|150396229|ref|YP_001326696.1| 30S ribosomal protein S13 [Sinorhizobium medicae WSM419] gi|166231926|sp|A6U881|RS13_SINMW RecName: Full=30S ribosomal protein S13 gi|150027744|gb|ABR59861.1| ribosomal protein S13 [Sinorhizobium medicae WSM419] Length = 122 Score = 184 bits (467), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 90/122 (73%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86357327|ref|YP_469219.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42] gi|123512263|sp|Q2K9J4|RS13_RHIEC RecName: Full=30S ribosomal protein S13 gi|86281429|gb|ABC90492.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42] Length = 122 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 91/122 (74%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15965131|ref|NP_385484.1| 30S ribosomal protein S13 [Sinorhizobium meliloti 1021] gi|307314381|ref|ZP_07593987.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C] gi|307322093|ref|ZP_07601469.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83] gi|32363377|sp|Q925X7|RS13_RHIME RecName: Full=30S ribosomal protein S13 gi|15074311|emb|CAC45957.1| Probable 30S ribosomal protein S13 [Sinorhizobium meliloti 1021] gi|16588800|gb|AAL26899.1| ribosomal protein S13 [Sinorhizobium meliloti] gi|306892275|gb|EFN23085.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83] gi|306899079|gb|EFN29721.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C] Length = 122 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 90/122 (73%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIIEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325293314|ref|YP_004279178.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3] gi|325061167|gb|ADY64858.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3] Length = 122 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 104/122 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ +P ++RVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGLPADKRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227821777|ref|YP_002825747.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234] gi|254811161|sp|C3MB01|RS13_RHISN RecName: Full=30S ribosomal protein S13 gi|227340776|gb|ACP24994.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234] Length = 122 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K + +I K+ IP +RRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAHEIVEKVGIPTDRRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319408743|emb|CBI82400.1| 30S ribosomal protein S13 [Bartonella schoenbuchensis R1] Length = 122 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I K+ IP ERRVH+L+++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGRKFAQEIVEKVGIPSERRVHELLDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|13470573|ref|NP_102142.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099] gi|260468532|ref|ZP_05813699.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075] gi|32363384|sp|Q98N35|RS13_RHILO RecName: Full=30S ribosomal protein S13 gi|14021315|dbj|BAB47928.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099] gi|259028688|gb|EEW29997.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075] Length = 122 Score = 177 bits (450), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I +K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGKKFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222085697|ref|YP_002544227.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84] gi|254811120|sp|B9JDV0|RS13_AGRRK RecName: Full=30S ribosomal protein S13 gi|221723145|gb|ACM26301.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84] Length = 122 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+IC K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALRYIHGIGPKFAQEICEKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGSYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222148388|ref|YP_002549345.1| 30S ribosomal protein S13 [Agrobacterium vitis S4] gi|254811121|sp|B9JVQ9|RS13_AGRVS RecName: Full=30S ribosomal protein S13 gi|221735376|gb|ACM36339.1| 30S ribosomal protein S13 [Agrobacterium vitis S4] Length = 122 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ + +RRVHQL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMEKVGLSADRRVHQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154253199|ref|YP_001414023.1| 30S ribosomal protein S13 [Parvibaculum lavamentivorans DS-1] gi|171769644|sp|A7HWT3|RS13_PARL1 RecName: Full=30S ribosomal protein S13 gi|154157149|gb|ABS64366.1| ribosomal protein S13 [Parvibaculum lavamentivorans DS-1] Length = 122 Score = 176 bits (446), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG +++IC + IP ERRV++L ++EVIQIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALTYIHGIGNTKAKEICGTVGIPAERRVNELTDAEVIQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319783342|ref|YP_004142818.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169230|gb|ADV12768.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 122 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +Q+I +K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGKRFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154248693|ref|YP_001419651.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2] gi|226712806|sp|A7IPP8|RS13_XANP2 RecName: Full=30S ribosomal protein S13 gi|154162778|gb|ABS69994.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2] Length = 122 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++++I K+ IP ERRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKNAEEIVTKVGIPAERRVNQLTDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170738681|ref|YP_001767336.1| 30S ribosomal protein S13 [Methylobacterium sp. 4-46] gi|226712763|sp|B0UHU7|RS13_METS4 RecName: Full=30S ribosomal protein S13 gi|168192955|gb|ACA14902.1| ribosomal protein S13 [Methylobacterium sp. 4-46] Length = 122 Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|220921921|ref|YP_002497222.1| 30S ribosomal protein S13 [Methylobacterium nodulans ORS 2060] gi|254811155|sp|B8IT33|RS13_METNO RecName: Full=30S ribosomal protein S13 gi|219946527|gb|ACL56919.1| ribosomal protein S13 [Methylobacterium nodulans ORS 2060] Length = 122 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163868628|ref|YP_001609837.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476] gi|189040491|sp|A9IVZ8|RS13_BART1 RecName: Full=30S ribosomal protein S13 gi|161018284|emb|CAK01842.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476] Length = 122 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ IP RRVH+L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITEKVGIPTGRRVHELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|144900906|emb|CAM77770.1| 30S ribosomal protein S13 [Magnetospirillum gryphiswaldense MSR-1] Length = 125 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI GIG + +IC KL+IP ERRV+QL + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALTYITGIGRTKAAEICTKLSIPAERRVNQLTDDEVLKIREMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DSDYTVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296445045|ref|ZP_06887006.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b] gi|296257466|gb|EFH04532.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b] Length = 122 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I K+ IPPERRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAKKAQEIIEKVNIPPERRVAQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|110634008|ref|YP_674216.1| 30S ribosomal protein S13 [Mesorhizobium sp. BNC1] gi|123162300|sp|Q11HS4|RS13_MESSB RecName: Full=30S ribosomal protein S13 gi|110284992|gb|ABG63051.1| SSU ribosomal protein S13P [Chelativorans sp. BNC1] Length = 122 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I +K+ IP +RRVHQL ++EV+ IR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163851602|ref|YP_001639645.1| ribosomal protein S13 [Methylobacterium extorquens PA1] gi|218530411|ref|YP_002421227.1| 30S ribosomal protein S13 [Methylobacterium chloromethanicum CM4] gi|240138770|ref|YP_002963242.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1] gi|254561370|ref|YP_003068465.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4] gi|226712759|sp|A9W4R8|RS13_METEP RecName: Full=30S ribosomal protein S13 gi|254811154|sp|B7L0S8|RS13_METC4 RecName: Full=30S ribosomal protein S13 gi|163663207|gb|ABY30574.1| ribosomal protein S13 [Methylobacterium extorquens PA1] gi|218522714|gb|ACK83299.1| ribosomal protein S13 [Methylobacterium chloromethanicum CM4] gi|240008739|gb|ACS39965.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1] gi|254268648|emb|CAX24607.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4] Length = 122 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319899077|ref|YP_004159170.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73] gi|319403041|emb|CBI76596.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73] Length = 122 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ + PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGQKFAQEIVEKVGVSPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|328543380|ref|YP_004303489.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1] gi|326413125|gb|ADZ70188.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1] Length = 122 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 88/122 (72%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I +K+ I PERRV+QL +SEV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKFAQEIIDKVNIAPERRVNQLSDSEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319404403|emb|CBI78006.1| 30S ribosomal protein S13 [Bartonella rochalimae ATCC BAA-1498] Length = 122 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I K+ I PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIEKVGISPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|49475772|ref|YP_033813.1| 30S ribosomal protein S13 [Bartonella henselae str. Houston-1] gi|81647796|sp|Q6G2Y7|RS13_BARHE RecName: Full=30S ribosomal protein S13 gi|49238579|emb|CAF27820.1| 30S ribosomal protein s13 [Bartonella henselae str. Houston-1] Length = 122 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ IP RRVH+L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITKKVGIPIGRRVHELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|182679001|ref|YP_001833147.1| 30S ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039] gi|226712696|sp|B2IF93|RS13_BEII9 RecName: Full=30S ribosomal protein S13 gi|182634884|gb|ACB95658.1| ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039] Length = 122 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +++IC K++IPPERRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKKAEEICEKVSIPPERRVVDLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|188581394|ref|YP_001924839.1| 30S ribosomal protein S13 [Methylobacterium populi BJ001] gi|226712761|sp|B1Z771|RS13_METPB RecName: Full=30S ribosomal protein S13 gi|179344892|gb|ACB80304.1| ribosomal protein S13 [Methylobacterium populi BJ001] Length = 122 Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|298291460|ref|YP_003693399.1| 30S ribosomal protein S13 [Starkeya novella DSM 506] gi|296927971|gb|ADH88780.1| 30S ribosomal protein S13 [Starkeya novella DSM 506] Length = 122 Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKNAADIVEKVGIPLDRRVNQLTDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|323136109|ref|ZP_08071192.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242] gi|322399200|gb|EFY01719.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242] Length = 122 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++IC K+ IP ERRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEICEKVNIPAERRVAQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319407403|emb|CBI81054.1| 30S ribosomal protein S13 [Bartonella sp. 1-1C] Length = 122 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I ++ I PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGISPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163760822|ref|ZP_02167901.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43] gi|162281866|gb|EDQ32158.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43] Length = 126 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 5 MARIAGVNIPTNKRVIIALTYIHGIGNKFAAEIVEKVGIPLDRRVNQLSDAEVLQIRETI 64 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 65 DRDYQVEGDLRRENSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 124 Query: 121 KR 122 K+ Sbjct: 125 KK 126 >gi|312115709|ref|YP_004013305.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100] gi|311220838|gb|ADP72206.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100] Length = 122 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YIHGIG K +++IC+K++IP ERRV++L ++E++QIR+ I Sbjct: 1 MARIAGVNIPSNKRVEIGLRYIHGIGAKYAKEICDKVSIPVERRVNELSDAEILQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|299135235|ref|ZP_07028426.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2] gi|298590212|gb|EFI50416.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2] Length = 122 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGQKNAADIMEKVKIPLDRRVSQLSDAEVLQIREMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|240850813|ref|YP_002972213.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup] gi|240267936|gb|ACS51524.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup] Length = 122 Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I ++ IP RRVH+L ++EV+Q+R+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEIIERVGIPLGRRVHELSDAEVLQVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|121602910|ref|YP_989019.1| 30S ribosomal protein S13 [Bartonella bacilliformis KC583] gi|158706337|sp|A1USR6|RS13_BARBK RecName: Full=30S ribosomal protein S13 gi|120615087|gb|ABM45688.1| ribosomal protein S13 [Bartonella bacilliformis KC583] Length = 122 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 83/111 (74%), Positives = 95/111 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+V AL YIHGIG K + I K+ IP ERRVH+L +SE++QIR+ I Sbjct: 1 MARIAGVNIPTNKRLVIALQYIHGIGEKFAHKIIEKVGIPAERRVHELSDSEILQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++DYQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK Sbjct: 61 DRDYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRK 111 >gi|319405876|emb|CBI79508.1| 30S ribosomal protein S13 [Bartonella sp. AR 15-3] Length = 122 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I ++ IP ERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGIPLERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254294418|ref|YP_003060441.1| ribosomal protein S13 [Hirschia baltica ATCC 49814] gi|254042949|gb|ACT59744.1| ribosomal protein S13 [Hirschia baltica ATCC 49814] Length = 122 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +Q+IC+K+ I ERRV L ++EVIQ+R+AI Sbjct: 1 MARIAGVNIPTNKRVTIALRYIHGIGPVKAQEICDKVGIAAERRVQDLSDAEVIQVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DADYVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153009308|ref|YP_001370523.1| 30S ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188] gi|239832100|ref|ZP_04680429.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301] gi|166231914|sp|A6X0E0|RS13_OCHA4 RecName: Full=30S ribosomal protein S13 gi|151561196|gb|ABS14694.1| ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188] gi|239824367|gb|EEQ95935.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301] Length = 122 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|209964062|ref|YP_002296977.1| ribosomal protein S13 [Rhodospirillum centenum SW] gi|226712783|sp|B6IRS8|RS13_RHOCS RecName: Full=30S ribosomal protein S13 gi|209957528|gb|ACI98164.1| ribosomal protein S13 [Rhodospirillum centenum SW] Length = 122 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++IC K+ IP ERRVHQL + EV++IR+ I Sbjct: 1 MARIAGVNIPTQKRVEIALQYIHGIGAAKAKEICGKVGIPVERRVHQLTDDEVLRIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR VAMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DSDYKVEGDLRREVAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|46202866|ref|ZP_00052474.2| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum MS-1] Length = 125 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG + +I L IP ERRV+QL + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALTYIHGIGRAKATEITTSLGIPAERRVNQLTDDEVLKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+QVEGDLRR+VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK K + Sbjct: 61 DRDFQVEGDLRRSVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300022563|ref|YP_003755174.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888] gi|299524384|gb|ADJ22853.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888] Length = 125 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 84/111 (75%), Positives = 95/111 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K S++IC K +IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRVEIALRYIHGIGPKFSKEICAKCSIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++DY VEGDLRR V NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DRDYTVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|254470460|ref|ZP_05083864.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062] gi|211960771|gb|EEA95967.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062] Length = 122 Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV AL YIHGIG K +Q+I +K+ I ERRV++L ++EV++IR+AI Sbjct: 1 MARIAGVNLPTNKRVVIALQYIHGIGAKFAQEITDKVGIAAERRVNELSDAEVLKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DAEYTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|91977630|ref|YP_570289.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB5] gi|123762626|sp|Q134V1|RS13_RHOPS RecName: Full=30S ribosomal protein S13 gi|91684086|gb|ABE40388.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB5] Length = 122 Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAADIIEKVKIPVDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254719269|ref|ZP_05181080.1| 30S ribosomal protein S13 [Brucella sp. 83/13] gi|265984269|ref|ZP_06097004.1| ribosomal protein S13 [Brucella sp. 83/13] gi|306838020|ref|ZP_07470878.1| 30S ribosomal protein S13 [Brucella sp. NF 2653] gi|306840323|ref|ZP_07473095.1| 30S ribosomal protein S13 [Brucella sp. BO2] gi|306844114|ref|ZP_07476708.1| 30S ribosomal protein S13 [Brucella sp. BO1] gi|264662861|gb|EEZ33122.1| ribosomal protein S13 [Brucella sp. 83/13] gi|306275557|gb|EFM57289.1| 30S ribosomal protein S13 [Brucella sp. BO1] gi|306289722|gb|EFM60911.1| 30S ribosomal protein S13 [Brucella sp. BO2] gi|306406944|gb|EFM63165.1| 30S ribosomal protein S13 [Brucella sp. NF 2653] Length = 122 Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296116711|ref|ZP_06835321.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769] gi|295976923|gb|EFG83691.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769] Length = 125 Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 82/111 (73%), Positives = 95/111 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG +Q IC+KL+IP ERRV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIALRYIYGIGATKAQTICDKLSIPGERRVNELSDDEIVKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK Sbjct: 61 DNDYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111 >gi|161610771|ref|NP_948567.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009] gi|192292014|ref|YP_001992619.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris TIE-1] gi|226712784|sp|B3QBV7|RS13_RHOPT RecName: Full=30S ribosomal protein S13 gi|192285763|gb|ACF02144.1| ribosomal protein S13 [Rhodopseudomonas palustris TIE-1] Length = 122 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|158424156|ref|YP_001525448.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571] gi|158331045|dbj|BAF88530.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571] Length = 157 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRVV AL YIHGIG K +++I K+ I ERRV+QL ++EV+QIR+ I Sbjct: 36 VARIAGVNIPTNKRVVIALQYIHGIGPKKAEEIVEKVGIAAERRVNQLTDAEVLQIRETI 95 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 96 DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 155 Query: 121 KR 122 K+ Sbjct: 156 KK 157 >gi|161611321|ref|YP_162274.2| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761082|ref|ZP_04759171.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752952|ref|YP_003225845.1| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|91207635|sp|Q5NQ42|RS13_ZYMMO RecName: Full=30S ribosomal protein S13 gi|241374701|gb|EER64162.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552315|gb|ACV75261.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775271|gb|AAV89163.2| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4] Length = 122 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++ I KL I PERRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|23012204|ref|ZP_00052348.1| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 15 LARIAGVNIPTGKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 74 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 75 DRDYVVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 134 Query: 121 KR 122 K+ Sbjct: 135 KK 136 >gi|217979115|ref|YP_002363262.1| 30S ribosomal protein S13 [Methylocella silvestris BL2] gi|254811156|sp|B8EIT3|RS13_METSB RecName: Full=30S ribosomal protein S13 gi|217504491|gb|ACK51900.1| ribosomal protein S13 [Methylocella silvestris BL2] Length = 122 Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++IC K+ IP RRV +L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGSKKAEEICAKVNIPDARRVSELTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|316933549|ref|YP_004108531.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1] gi|315601263|gb|ADU43798.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1] Length = 122 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|115525563|ref|YP_782474.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisA53] gi|122295429|sp|Q07KP0|RS13_RHOP5 RecName: Full=30S ribosomal protein S13 gi|115519510|gb|ABJ07494.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisA53] Length = 122 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + DI K+ IP +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|304391477|ref|ZP_07373419.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130] gi|303295706|gb|EFL90064.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130] Length = 122 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR V AL YIHGIG K++ +I K IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRTVIALQYIHGIGQKNANEIVTKANIPMERRVNQLTDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|288958719|ref|YP_003449060.1| small subunit ribosomal protein S13 [Azospirillum sp. B510] gi|288911027|dbj|BAI72516.1| small subunit ribosomal protein S13 [Azospirillum sp. B510] Length = 122 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YIHGIG +++IC KL IP ERRV++L + EV++IR+ I Sbjct: 1 MARIAGVNIPAQKRVEIGLTYIHGIGPFKAKEICAKLEIPAERRVNELTDDEVLKIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADYRVEGDLRREVAMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170748612|ref|YP_001754872.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831] gi|226712762|sp|B1LWQ2|RS13_METRJ RecName: Full=30S ribosomal protein S13 gi|170655134|gb|ACB24189.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831] Length = 122 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAKKAEEITQKVNIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLG YRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGAYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|92117120|ref|YP_576849.1| 30S ribosomal protein S13 [Nitrobacter hamburgensis X14] gi|122418085|sp|Q1QN08|RS13_NITHX RecName: Full=30S ribosomal protein S13 gi|91800014|gb|ABE62389.1| SSU ribosomal protein S13P [Nitrobacter hamburgensis X14] Length = 122 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K++ +I +K+ IP +RRV QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIDKVKIPADRRVSQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|75675578|ref|YP_317999.1| 30S ribosomal protein S13 [Nitrobacter winogradskyi Nb-255] gi|85715108|ref|ZP_01046092.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A] gi|91207710|sp|Q3SSU4|RS13_NITWN RecName: Full=30S ribosomal protein S13 gi|74420448|gb|ABA04647.1| SSU ribosomal protein S13P [Nitrobacter winogradskyi Nb-255] gi|85698023|gb|EAQ35896.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A] Length = 122 Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K++ +I K+ IP +RRV QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIEKVKIPADRRVSQLTDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|81562141|sp|Q6N4V5|RS13_RHOPA RecName: Full=30S ribosomal protein S13; AltName: Full=RRP-S13 gi|39650146|emb|CAE28669.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009] Length = 128 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 7 VARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 67 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 126 Query: 121 KR 122 K+ Sbjct: 127 KK 128 >gi|86749437|ref|YP_485933.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris HaA2] gi|123408223|sp|Q2IXN8|RS13_RHOP2 RecName: Full=30S ribosomal protein S13 gi|86572465|gb|ABD07022.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris HaA2] Length = 122 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ +I K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEIIEKVKIPVDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|17987062|ref|NP_539696.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|23502088|ref|NP_698215.1| 30S ribosomal protein S13 [Brucella suis 1330] gi|62290122|ref|YP_221915.1| 30S ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941] gi|82700045|ref|YP_414619.1| 30S ribosomal protein S13 [Brucella melitensis biovar Abortus 2308] gi|148560452|ref|YP_001259131.1| 30S ribosomal protein S13 [Brucella ovis ATCC 25840] gi|161619166|ref|YP_001593053.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365] gi|163843476|ref|YP_001627880.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445] gi|189024360|ref|YP_001935128.1| Ribosomal protein S13 [Brucella abortus S19] gi|225627682|ref|ZP_03785719.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo] gi|225852707|ref|YP_002732940.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457] gi|254689431|ref|ZP_05152685.1| 30S ribosomal protein S13 [Brucella abortus bv. 6 str. 870] gi|254693916|ref|ZP_05155744.1| 30S ribosomal protein S13 [Brucella abortus bv. 3 str. Tulya] gi|254697566|ref|ZP_05159394.1| 30S ribosomal protein S13 [Brucella abortus bv. 2 str. 86/8/59] gi|254701952|ref|ZP_05163780.1| 30S ribosomal protein S13 [Brucella suis bv. 5 str. 513] gi|254704496|ref|ZP_05166324.1| 30S ribosomal protein S13 [Brucella suis bv. 3 str. 686] gi|254706608|ref|ZP_05168436.1| 30S ribosomal protein S13 [Brucella pinnipedialis M163/99/10] gi|254710282|ref|ZP_05172093.1| 30S ribosomal protein S13 [Brucella pinnipedialis B2/94] gi|254730460|ref|ZP_05189038.1| 30S ribosomal protein S13 [Brucella abortus bv. 4 str. 292] gi|256031776|ref|ZP_05445390.1| 30S ribosomal protein S13 [Brucella pinnipedialis M292/94/1] gi|256044861|ref|ZP_05447765.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. Rev.1] gi|256061291|ref|ZP_05451441.1| 30S ribosomal protein S13 [Brucella neotomae 5K33] gi|256113765|ref|ZP_05454569.1| 30S ribosomal protein S13 [Brucella melitensis bv. 3 str. Ether] gi|256159946|ref|ZP_05457664.1| 30S ribosomal protein S13 [Brucella ceti M490/95/1] gi|256255177|ref|ZP_05460713.1| 30S ribosomal protein S13 [Brucella ceti B1/94] gi|256257677|ref|ZP_05463213.1| 30S ribosomal protein S13 [Brucella abortus bv. 9 str. C68] gi|256263802|ref|ZP_05466334.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9] gi|256369635|ref|YP_003107145.1| 30S ribosomal protein S13 [Brucella microti CCM 4915] gi|260168910|ref|ZP_05755721.1| 30S ribosomal protein S13 [Brucella sp. F5/99] gi|260546670|ref|ZP_05822409.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038] gi|260565537|ref|ZP_05836021.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|260566260|ref|ZP_05836730.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40] gi|260754954|ref|ZP_05867302.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870] gi|260758170|ref|ZP_05870518.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292] gi|260761996|ref|ZP_05874339.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59] gi|260883963|ref|ZP_05895577.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68] gi|261214208|ref|ZP_05928489.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya] gi|261222373|ref|ZP_05936654.1| SSU ribosomal protein S13P [Brucella ceti B1/94] gi|261314067|ref|ZP_05953264.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10] gi|261317845|ref|ZP_05957042.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94] gi|261325298|ref|ZP_05964495.1| SSU ribosomal protein S13P [Brucella neotomae 5K33] gi|261752520|ref|ZP_05996229.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513] gi|261755179|ref|ZP_05998888.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686] gi|261758403|ref|ZP_06002112.1| SSU ribosomal protein S13P [Brucella sp. F5/99] gi|265988874|ref|ZP_06101431.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1] gi|265991288|ref|ZP_06103845.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1] gi|265995125|ref|ZP_06107682.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether] gi|265998338|ref|ZP_06110895.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1] gi|294852546|ref|ZP_06793219.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026] gi|297248517|ref|ZP_06932235.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196] gi|54039348|sp|P66382|RS13_BRUSU RecName: Full=30S ribosomal protein S13 gi|54042120|sp|P66381|RS13_BRUME RecName: Full=30S ribosomal protein S13 gi|75496693|sp|Q57CT0|RS13_BRUAB RecName: Full=30S ribosomal protein S13 gi|91207690|sp|Q2YRT8|RS13_BRUA2 RecName: Full=30S ribosomal protein S13 gi|158706216|sp|A5VQY4|RS13_BRUO2 RecName: Full=30S ribosomal protein S13 gi|189040492|sp|A9M5M7|RS13_BRUC2 RecName: Full=30S ribosomal protein S13 gi|189040493|sp|B0CH09|RS13_BRUSI RecName: Full=30S ribosomal protein S13 gi|226712703|sp|B2S657|RS13_BRUA1 RecName: Full=30S ribosomal protein S13 gi|254811133|sp|C0RJH8|RS13_BRUMB RecName: Full=30S ribosomal protein S13 gi|17982719|gb|AAL51960.1| ssu ribosomal protein s13p [Brucella melitensis bv. 1 str. 16M] gi|23348047|gb|AAN30130.1| ribosomal protein S13 [Brucella suis 1330] gi|62196254|gb|AAX74554.1| RpsM, ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941] gi|82616146|emb|CAJ11189.1| Ribosomal protein S13 [Brucella melitensis biovar Abortus 2308] gi|148371709|gb|ABQ61688.1| ribosomal protein S13 [Brucella ovis ATCC 25840] gi|161335977|gb|ABX62282.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365] gi|163674199|gb|ABY38310.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445] gi|189019932|gb|ACD72654.1| Ribosomal protein S13 [Brucella abortus S19] gi|225617687|gb|EEH14732.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo] gi|225641072|gb|ACO00986.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457] gi|255999797|gb|ACU48196.1| 30S ribosomal protein S13 [Brucella microti CCM 4915] gi|260095720|gb|EEW79597.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038] gi|260151605|gb|EEW86699.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|260155778|gb|EEW90858.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40] gi|260668488|gb|EEX55428.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292] gi|260672428|gb|EEX59249.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59] gi|260675062|gb|EEX61883.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870] gi|260873491|gb|EEX80560.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68] gi|260915815|gb|EEX82676.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya] gi|260920957|gb|EEX87610.1| SSU ribosomal protein S13P [Brucella ceti B1/94] gi|261297068|gb|EEY00565.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94] gi|261301278|gb|EEY04775.1| SSU ribosomal protein S13P [Brucella neotomae 5K33] gi|261303093|gb|EEY06590.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10] gi|261738387|gb|EEY26383.1| SSU ribosomal protein S13P [Brucella sp. F5/99] gi|261742273|gb|EEY30199.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513] gi|261744932|gb|EEY32858.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686] gi|262552806|gb|EEZ08796.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1] gi|262766238|gb|EEZ12027.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether] gi|263002072|gb|EEZ14647.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1] gi|263093930|gb|EEZ17864.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9] gi|264661071|gb|EEZ31332.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1] gi|294821135|gb|EFG38134.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026] gi|297175686|gb|EFH35033.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196] gi|326409232|gb|ADZ66297.1| Ribosomal protein S13 [Brucella melitensis M28] gi|326538940|gb|ADZ87155.1| 30S ribosomal protein S13 [Brucella melitensis M5-90] Length = 122 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|209884835|ref|YP_002288692.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5] gi|209873031|gb|ACI92827.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5] Length = 125 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV QL + EV+QIR+ I Sbjct: 4 VARIAGVNIPTNKRVIIALQYIHGIGQKNAADIVEKVKIPLDRRVSQLTDQEVLQIREII 63 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 64 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 123 Query: 121 KR 122 K+ Sbjct: 124 KK 125 >gi|83858544|ref|ZP_00952066.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633] gi|83853367|gb|EAP91219.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633] Length = 122 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 83/122 (68%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG + +IC K+ IP E+RV QL ++E++QIR+AI Sbjct: 1 MARIAGVNIPTNKRVTIALRYIHGIGPAMAAEICEKVGIPAEKRVSQLTDAEILQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR VA+N+KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DAGYTVEGDLRREVAVNVKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|237815630|ref|ZP_04594627.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A] gi|237788928|gb|EEP63139.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A] Length = 175 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 54 VARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 113 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 114 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 173 Query: 121 KR 122 K+ Sbjct: 174 KK 175 >gi|162139877|ref|YP_744397.2| 30S ribosomal protein S13 [Granulibacter bethesdensis CGDNIH1] gi|158706371|sp|Q0BUM8|RS13_GRABC RecName: Full=30S ribosomal protein S13 Length = 125 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 81/111 (72%), Positives = 96/111 (86%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV +L YI+GIG +Q IC +L+IP ERRV+QL + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 >gi|254714279|ref|ZP_05176090.1| 30S ribosomal protein S13 [Brucella ceti M644/93/1] gi|254717716|ref|ZP_05179527.1| 30S ribosomal protein S13 [Brucella ceti M13/05/1] gi|261219559|ref|ZP_05933840.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1] gi|261322054|ref|ZP_05961251.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1] gi|260924648|gb|EEX91216.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1] gi|261294744|gb|EEX98240.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1] Length = 122 Score = 166 bits (420), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV++IR+AI Sbjct: 1 MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254503181|ref|ZP_05115332.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11] gi|222439252|gb|EEE45931.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11] Length = 126 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRVV AL YIHGIG K +Q+I K +I RRV++L ++EV+QIR+ I Sbjct: 5 VARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIVEKNSIDAARRVNELSDAEVLQIRETI 64 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 65 DRDYMVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 124 Query: 121 KR 122 K+ Sbjct: 125 KK 126 >gi|27380489|ref|NP_772018.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110] gi|32363304|sp|Q89JA6|RS13_BRAJA RecName: Full=30S ribosomal protein S13 gi|27353653|dbj|BAC50643.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110] Length = 122 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ IP +RRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|58038833|ref|YP_190797.1| 30S ribosomal protein S13 [Gluconobacter oxydans 621H] gi|81352519|sp|Q5FU05|RS13_GLUOX RecName: Full=30S ribosomal protein S13 gi|58001247|gb|AAW60141.1| SSU ribosomal protein S13P [Gluconobacter oxydans 621H] Length = 125 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/111 (71%), Positives = 94/111 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL Y++GIG ++Q ICNKL IP +RV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALRYVYGIGPSTAQSICNKLEIPDAKRVNELSDDEIVKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DSELRVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 >gi|114315414|gb|ABI61474.1| SSU ribosomal protein S13P [Granulibacter bethesdensis CGDNIH1] Length = 137 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 80/111 (72%), Positives = 96/111 (86%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV +L YI+GIG +Q IC +L+IP ERRV+QL + E+++IR+ I Sbjct: 13 VARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 72 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 73 DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 123 >gi|162149152|ref|YP_001603613.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|209545104|ref|YP_002277333.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|189044278|sp|A9H3J7|RS13_GLUDA RecName: Full=30S ribosomal protein S13 gi|161787729|emb|CAP57325.1| putative 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|209532781|gb|ACI52718.1| ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] Length = 125 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/111 (71%), Positives = 94/111 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YI+GIG +++IC +L IP ERRV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIGLRYIYGIGETKAEEICRRLEIPAERRVNELSDDEILKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DSEYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 >gi|162136028|ref|YP_533285.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB18] gi|158706368|sp|Q211H0|RS13_RHOPB RecName: Full=30S ribosomal protein S13 Length = 122 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ +I K+ I ++RV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307294933|ref|ZP_07574775.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1] gi|306879407|gb|EFN10625.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1] Length = 122 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ D+ +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDLADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|90417745|ref|ZP_01225657.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1] gi|90337417|gb|EAS51068.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1] Length = 122 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG ++DI K+ + ERRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAAHAKDIVKKVNLGDERRVNDLTDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY+VEGDLRR AMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYRVEGDLRRETAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114570323|ref|YP_757003.1| 30S ribosomal protein S13 [Maricaulis maris MCS10] gi|122315803|sp|Q0ANS2|RS13_MARMM RecName: Full=30S ribosomal protein S13 gi|114340785|gb|ABI66065.1| SSU ribosomal protein S13P [Maricaulis maris MCS10] Length = 122 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/122 (68%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++IC +++I PERRV +L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVEIALRYIHGIGPAKAKEICEQVSILPERRVSELTDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+QVEGDLRR VA+NIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDHQVEGDLRREVAVNIKRLMDLGNYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|49474382|ref|YP_032424.1| 30S ribosomal protein S13 [Bartonella quintana str. Toulouse] gi|81646970|sp|Q6FZE4|RS13_BARQU RecName: Full=30S ribosomal protein S13 gi|49239886|emb|CAF26284.1| 30s ribosomal protein s13 [Bartonella quintana str. Toulouse] Length = 122 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +Q+I K+ IP RRV +L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPRFAQEITKKVGIPVGRRVCELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y+VEGDLRR VA+N+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYKVEGDLRREVAVNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294010567|ref|YP_003544027.1| ribosomal protein S13 [Sphingobium japonicum UT26S] gi|292673897|dbj|BAI95415.1| ribosomal protein S13 [Sphingobium japonicum UT26S] Length = 122 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI +KL I RRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHSRRVQDLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329889149|ref|ZP_08267492.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568] gi|328844450|gb|EGF94014.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568] Length = 122 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++++I K+ I P RRV+QL ++E++QIR+ I Sbjct: 1 MARIAGVNIPTNKRVEIALQYIHGIGAHNAKEITAKIGIEPARRVNQLTDAEILQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|16125519|ref|NP_420083.1| 30S ribosomal protein S13 [Caulobacter crescentus CB15] gi|221234265|ref|YP_002516701.1| 30S ribosomal protein S13 [Caulobacter crescentus NA1000] gi|32363389|sp|Q9A8T1|RS13_CAUCR RecName: Full=30S ribosomal protein S13 gi|254811137|sp|B8H4F6|RS13_CAUCN RecName: Full=30S ribosomal protein S13 gi|13422603|gb|AAK23251.1| ribosomal protein S13 [Caulobacter crescentus CB15] gi|220963437|gb|ACL94793.1| SSU ribosomal protein S13P [Caulobacter crescentus NA1000] Length = 122 Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS+++I K+ I RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|162139937|ref|YP_001261831.2| 30S ribosomal protein S13 [Sphingomonas wittichii RW1] Length = 122 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 83/122 (68%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++I KL I P+RRV L + EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|330993870|ref|ZP_08317802.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1] gi|329759138|gb|EGG75650.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1] Length = 125 Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 80/111 (72%), Positives = 93/111 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG +Q IC++L IP ERRV++L + E+ +IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIALRYIYGIGATKAQAICDQLEIPAERRVNELSDDEIGKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK Sbjct: 61 DSNYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111 >gi|114800366|ref|YP_761507.1| 30S ribosomal protein S13 [Hyphomonas neptunium ATCC 15444] gi|123027743|sp|Q0BYD6|RS13_HYPNA RecName: Full=30S ribosomal protein S13 gi|114740540|gb|ABI78665.1| ribosomal protein S13 [Hyphomonas neptunium ATCC 15444] Length = 122 Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG S++IC K+ + P RRV+QL ++EVI+IR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALRYIHGIGPSFSKEICEKVGVEPSRRVNQLTDAEVIKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR +MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DAGYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRKKLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|103486060|ref|YP_615621.1| 30S ribosomal protein S13 [Sphingopyxis alaskensis RB2256] gi|123380095|sp|Q1GVN4|RS13_SPHAL RecName: Full=30S ribosomal protein S13 gi|98976137|gb|ABF52288.1| SSU ribosomal protein S13P [Sphingopyxis alaskensis RB2256] Length = 122 Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV+ AL YIHGIG K++ DI +KL I RRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNLPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHGRRVQDLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRNTAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|90106929|gb|ABD88966.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB18] Length = 148 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV+ AL YIHGIG K++ +I K+ I ++RV+QL + EV+QIR+ I Sbjct: 27 VARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 86 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 87 DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 146 Query: 121 KR 122 K+ Sbjct: 147 KK 148 >gi|307946309|ref|ZP_07661644.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4] gi|307769973|gb|EFO29199.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4] Length = 122 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 83/122 (68%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKFAQEIVEKNNIDAARRVNELSDAEVLSIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163796897|ref|ZP_02190854.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199] gi|159177886|gb|EDP62435.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199] Length = 122 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 97/122 (79%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVNIP KRVV AL YIHGIG ++ IC+ + +P ERRVH+L E E+ ++R++I Sbjct: 1 MARISGVNIPTQKRVVIALTYIHGIGRTTASRICSSVGVPAERRVHELTEDELSRLRESI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AM+IKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K +A Sbjct: 61 DADLIVEGDLRRQTAMSIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAK-AIAG 119 Query: 121 KR 122 KR Sbjct: 120 KR 121 >gi|167645600|ref|YP_001683263.1| 30S ribosomal protein S13 [Caulobacter sp. K31] gi|189040494|sp|B0T2E4|RS13_CAUSK RecName: Full=30S ribosomal protein S13 gi|167348030|gb|ABZ70765.1| ribosomal protein S13 [Caulobacter sp. K31] Length = 122 Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS++DI K+ I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSARDIVTKVGIDDARRVNQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DKDFTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|118591159|ref|ZP_01548558.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614] gi|118436235|gb|EAV42877.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614] Length = 126 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/122 (68%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRVV AL YIHGIG K +Q+I K I RRV++L ++EV+ IR+ I Sbjct: 5 VARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIIEKNNIDAARRVNELSDAEVLSIRETI 64 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 65 DRDYLVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 124 Query: 121 KR 122 K+ Sbjct: 125 KK 126 >gi|94496223|ref|ZP_01302801.1| ribosomal protein S13 [Sphingomonas sp. SKA58] gi|94424402|gb|EAT09425.1| ribosomal protein S13 [Sphingomonas sp. SKA58] Length = 122 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRHTAVSIADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148499439|gb|ABQ67693.1| SSU ribosomal protein S13P [Sphingomonas wittichii RW1] Length = 137 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV AL YIHGIG +++I KL I P+RRV L + EV+QIR+AI Sbjct: 16 VARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 75 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 76 DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 135 Query: 121 KR 122 K+ Sbjct: 136 KK 137 >gi|197104718|ref|YP_002130095.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1] gi|196478138|gb|ACG77666.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1] Length = 129 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRVV AL YIHGIG +++I NK+ I RRV+QL + EV+QIR+ I Sbjct: 8 VARIAGVNIPTNKRVVIALQYIHGIGAAKAREIVNKVGIEDARRVNQLTDQEVLQIRETI 67 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR A+NIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 68 DRDYMVEGDLRRDTAVNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 127 Query: 121 KR 122 K+ Sbjct: 128 KK 129 >gi|295688928|ref|YP_003592621.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756] gi|295430831|gb|ADG10003.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756] Length = 122 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/122 (66%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS+++I K+ I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255262793|ref|ZP_05342135.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62] gi|255105128|gb|EET47802.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62] Length = 122 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL Y+ GIG S+Q IC + I P RRV++L ++EV+++R+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYVTGIGTTSAQKICEAVGIDPTRRVNELSDAEVLKVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENYTVEGDLRREATMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254421006|ref|ZP_05034730.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3] gi|196187183|gb|EDX82159.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3] Length = 133 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV AL YIHGIG +++DI K+ I P RRV+QL ++EV+ IR+ I Sbjct: 12 VARIAGVNIPTNKRVEIALQYIHGIGPAAAKDITEKVGIEPARRVNQLTDAEVLSIRETI 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 72 DKDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|148256370|ref|YP_001240955.1| 30S ribosomal protein S13 [Bradyrhizobium sp. BTAi1] gi|158706214|sp|A5ELK5|RS13_BRASB RecName: Full=30S ribosomal protein S13 gi|146408543|gb|ABQ37049.1| SSU ribosomal protein S13P [Bradyrhizobium sp. BTAi1] Length = 122 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ I +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGPKIASEIIEKVKIAEDRRVNQLSDQEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|332186879|ref|ZP_08388621.1| 30S ribosomal protein S13 [Sphingomonas sp. S17] gi|332013212|gb|EGI55275.1| 30S ribosomal protein S13 [Sphingomonas sp. S17] Length = 122 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG +++I KL I +RRV L + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGPAKAKEITAKLNIAADRRVQDLSDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|87200542|ref|YP_497799.1| 30S ribosomal protein S13 [Novosphingobium aromaticivorans DSM 12444] gi|123488705|sp|Q2G5A8|RS13_NOVAD RecName: Full=30S ribosomal protein S13 gi|87136223|gb|ABD26965.1| SSU ribosomal protein S13P [Novosphingobium aromaticivorans DSM 12444] Length = 122 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++E++QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGSFKAKQIADKLGIDHSRRVQDLSDAEILQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAEHTVEGDLRREVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|110678752|ref|YP_681759.1| 30S ribosomal protein S13 [Roseobacter denitrificans OCh 114] gi|122972937|sp|Q16AC0|RS13_ROSDO RecName: Full=30S ribosomal protein S13 gi|109454868|gb|ABG31073.1| ribosomal protein S13 [Roseobacter denitrificans OCh 114] Length = 122 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I P RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254466762|ref|ZP_05080173.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I] gi|206687670|gb|EDZ48152.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I] Length = 122 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC+ + I P RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICDAVGIDPTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|146340079|ref|YP_001205127.1| 30S ribosomal protein S13 [Bradyrhizobium sp. ORS278] gi|158706215|sp|A4YSL4|RS13_BRASO RecName: Full=30S ribosomal protein S13 gi|146192885|emb|CAL76890.1| 30S ribosomal subunit protein S13 [Bradyrhizobium sp. ORS278] Length = 122 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ I +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGPKIAGEIIEKVKIAEDRRVNQLSDQEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|315497995|ref|YP_004086799.1| 30S ribosomal protein s13 [Asticcacaulis excentricus CB 48] gi|315416007|gb|ADU12648.1| 30S ribosomal protein S13 [Asticcacaulis excentricus CB 48] Length = 122 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +++I K+ I RRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQQKAKEIVEKVGIEDARRVNSLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148260917|ref|YP_001235044.1| 30S ribosomal protein S13 [Acidiphilium cryptum JF-5] gi|326404315|ref|YP_004284397.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301] gi|166231896|sp|A5FZU3|RS13_ACICJ RecName: Full=30S ribosomal protein S13 gi|146402598|gb|ABQ31125.1| SSU ribosomal protein S13P [Acidiphilium cryptum JF-5] gi|325051177|dbj|BAJ81515.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301] Length = 125 Score = 159 bits (403), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 77/111 (69%), Positives = 95/111 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ +L YI+GIG +++IC L I ++RV+QL E E+++IR+ I Sbjct: 1 MARIAGVNIPSNKRVLISLRYIYGIGPAKAREICQSLEIGEDKRVNQLSEDEIMKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++DY+VEGDLRR VAMNIKRL+DLGCYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DRDYRVEGDLRREVAMNIKRLVDLGCYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|304321462|ref|YP_003855105.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503] gi|303300364|gb|ADM09963.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503] Length = 122 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++I +++ I ERRV +L ++E+++IR+AI Sbjct: 1 MARIAGVNIPNNKRVHIALTYIHGIGPSLAKEITDRVGIAEERRVQELSDAEILRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR A+NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DEGYTVEGDLRRETAVNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218508351|ref|ZP_03506229.1| 30S ribosomal protein S13 [Rhizobium etli Brasil 5] Length = 111 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 78/107 (72%), Positives = 89/107 (83%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 V AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI++DYQVEGDLRR A Sbjct: 5 VIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAIDRDYQVEGDLRRETA 64 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K+ Sbjct: 65 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK 111 >gi|326387081|ref|ZP_08208691.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM 19370] gi|326208262|gb|EGD59069.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM 19370] Length = 122 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIVALTYIHGIGPFKARQIADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAEHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163739471|ref|ZP_02146881.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107] gi|163740264|ref|ZP_02147658.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10] gi|161386122|gb|EDQ10497.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10] gi|161387224|gb|EDQ11583.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107] Length = 122 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGTTSAEAICEAVGIDATRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302382641|ref|YP_003818464.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264] gi|302193269|gb|ADL00841.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264] Length = 133 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV AL YIHGIG +++DI K+ I RRV+QL ++EV+QIR+ I Sbjct: 12 VARIAGVNIPTNKRVEIALQYIHGIGPAAAKDIVGKVGIEASRRVNQLTDAEVLQIRETI 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 72 DKDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|146278546|ref|YP_001168705.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17025] gi|166231918|sp|A4WVI6|RS13_RHOS5 RecName: Full=30S ribosomal protein S13 gi|145556787|gb|ABP71400.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17025] Length = 122 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YIHGIG ++ IC+ + I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYIHGIGNHVAEQICDAVGIDRARRVNQLSDAEVLAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254474763|ref|ZP_05088149.1| ribosomal protein S13p/S18e [Ruegeria sp. R11] gi|214029006|gb|EEB69841.1| ribosomal protein S13p/S18e [Ruegeria sp. R11] Length = 122 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGSTSAEAICEAVGIDRTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|56695423|ref|YP_165771.1| 30S ribosomal protein S13 [Ruegeria pomeroyi DSS-3] gi|81350693|sp|Q5LW34|RS13_SILPO RecName: Full=30S ribosomal protein S13 gi|56677160|gb|AAV93826.1| ribosomal protein S13 [Ruegeria pomeroyi DSS-3] Length = 122 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++E++ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEILAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYSVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329114196|ref|ZP_08242958.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001] gi|326696272|gb|EGE47951.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001] Length = 125 Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 74/111 (66%), Positives = 90/111 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV L YI+GIG + +IC L IP +RV++L + E++++R+ I Sbjct: 1 MARIAGVNVPTNKRVVIGLQYIYGIGATKAAEICKALEIPEAKRVNELSDDEILKVRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK Sbjct: 61 DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111 >gi|296534009|ref|ZP_06896525.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957] gi|296265675|gb|EFH11784.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957] Length = 177 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 75/111 (67%), Positives = 95/111 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ +L YI+GIG +++ IC +L IP +RRV+QL + E+++IR+ I Sbjct: 53 MARIAGVNIPTNKRVLISLRYIYGIGPANAKVICEQLGIPEDRRVNQLTDEEILKIRELI 112 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR AMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 113 DREYRVEGDLRRENAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRK 163 >gi|310816988|ref|YP_003964952.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25] gi|308755723|gb|ADO43652.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25] Length = 122 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I P RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGPTSAEAICAAVGIEPTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V+MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVSMNIKRLMDLGAYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126737030|ref|ZP_01752765.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6] gi|126721615|gb|EBA18318.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6] Length = 122 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPTSAKAICEAVNIDETRRVNELSDAEVLSIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83941473|ref|ZP_00953935.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36] gi|83847293|gb|EAP85168.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36] Length = 122 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260432470|ref|ZP_05786441.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157] gi|260416298|gb|EEX09557.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157] Length = 122 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKKICEAVGIDESRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163733785|ref|ZP_02141227.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149] gi|161392896|gb|EDQ17223.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149] Length = 145 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP AKRV AL YI GIG S++ IC + I P RRV++L ++EV+ +R+ I Sbjct: 24 VARIAGVNIPTAKRVPIALTYITGIGNNSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 83 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 84 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 143 Query: 121 KR 122 K+ Sbjct: 144 KK 145 >gi|163745566|ref|ZP_02152926.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45] gi|161382384|gb|EDQ06793.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45] Length = 122 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGTSSAKAICEAVGIDATRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|84499818|ref|ZP_00998106.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597] gi|84392962|gb|EAQ05173.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597] Length = 122 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+Q IC I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPSSAQSICEATGIDQTRRVNELSDAEVLTIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|162139378|ref|YP_914590.2| 30S ribosomal protein S13 [Paracoccus denitrificans PD1222] gi|158706363|sp|A1B050|RS13_PARDP RecName: Full=30S ribosomal protein S13 Length = 122 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126724890|ref|ZP_01740733.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150] gi|126706054|gb|EBA05144.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150] Length = 122 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGTTSAAAICEAVGIESTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYNVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|258542049|ref|YP_003187482.1| 30S ribosomal protein S13 [Acetobacter pasteurianus IFO 3283-01] gi|256633127|dbj|BAH99102.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01] gi|256636184|dbj|BAI02153.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-03] gi|256639239|dbj|BAI05201.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-07] gi|256642293|dbj|BAI08248.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-22] gi|256645348|dbj|BAI11296.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-26] gi|256648403|dbj|BAI14344.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-32] gi|256651456|dbj|BAI17390.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654447|dbj|BAI20374.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-12] Length = 125 Score = 157 bits (396), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 74/111 (66%), Positives = 90/111 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV L YI+GIG + +IC L IP +RV++L + E++++R+ I Sbjct: 1 MARIAGVNVPTNKRVVIGLQYIYGIGATKAVEICKALEIPEAKRVNELSDDEILKLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK Sbjct: 61 DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111 >gi|126728201|ref|ZP_01744017.1| 30S ribosomal protein S13 [Sagittula stellata E-37] gi|126711166|gb|EBA10216.1| 30S ribosomal protein S13 [Sagittula stellata E-37] Length = 122 Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGHTSARAICEAVGIDATRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83593998|ref|YP_427750.1| 30S ribosomal protein S13 [Rhodospirillum rubrum ATCC 11170] gi|91207722|sp|Q2RQY2|RS13_RHORT RecName: Full=30S ribosomal protein S13 gi|83576912|gb|ABC23463.1| SSU ribosomal protein S13P [Rhodospirillum rubrum ATCC 11170] Length = 122 Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG + +IC + I RRV+ L + EV++IR+ I Sbjct: 1 MARIAGVNIPSNKRVCIALTYIYGIGRTKAGEICERTGIAENRRVNDLSDDEVVRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VAMNIKR+MDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DSEYKVEGDLRREVAMNIKRIMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254486500|ref|ZP_05099705.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101] gi|214043369|gb|EEB84007.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101] Length = 122 Score = 156 bits (395), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNSSAAQICEAVGIDTTRRINELSDAEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENFSVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|99080118|ref|YP_612272.1| 30S ribosomal protein S13 [Ruegeria sp. TM1040] gi|123379121|sp|Q1GK06|RS13_SILST RecName: Full=30S ribosomal protein S13 gi|99036398|gb|ABF63010.1| SSU ribosomal protein S13P [Ruegeria sp. TM1040] Length = 122 Score = 156 bits (394), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 80/122 (65%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260426999|ref|ZP_05780978.1| 30S ribosomal protein S13 [Citreicella sp. SE45] gi|260421491|gb|EEX14742.1| 30S ribosomal protein S13 [Citreicella sp. SE45] Length = 122 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+Q IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHTSAQAICEAVNIEASRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254511521|ref|ZP_05123588.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11] gi|221535232|gb|EEE38220.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11] Length = 122 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIEAHRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86135791|ref|ZP_01054370.1| ribosomal protein S13 [Roseobacter sp. MED193] gi|85826665|gb|EAQ46861.1| ribosomal protein S13 [Roseobacter sp. MED193] Length = 122 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPAAKRVPIALTYITGIGNTSAATICEAVGIDVTRRVNELSDAEVLSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|77462281|ref|YP_351785.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides 2.4.1] gi|126461157|ref|YP_001042271.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17029] gi|221638135|ref|YP_002524397.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131] gi|91207723|sp|Q3J5Q0|RS13_RHOS4 RecName: Full=30S ribosomal protein S13 gi|158706272|sp|A3PGN3|RS13_RHOS1 RecName: Full=30S ribosomal protein S13 gi|254811163|sp|B9KLB3|RS13_RHOSK RecName: Full=30S ribosomal protein S13 gi|77386699|gb|ABA77884.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides 2.4.1] gi|126102821|gb|ABN75499.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17029] gi|221158916|gb|ACL99895.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131] Length = 122 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YIHGIG + IC+ + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYIHGIGDFVAGQICDAVGIDRARRVNELSDAEVLSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294085980|ref|YP_003552740.1| 30S ribosomal protein S13 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665555|gb|ADE40656.1| ribosomal protein S13 [Candidatus Puniceispirillum marinum IMCC1322] Length = 122 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++++IC + +P ERRV+ L E E+ ++R I Sbjct: 1 MARIAGVNIPTKKRVEIALTYIHGIGTTTAKNICERAGVPDERRVNDLSEEELTKLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR +MNIKR +DLGC RGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DADVLVEGDLRRQTSMNIKRYLDLGCLRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83854950|ref|ZP_00948480.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1] gi|83842793|gb|EAP81960.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1] Length = 133 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I Sbjct: 12 VARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 72 DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|114704506|ref|ZP_01437414.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506] gi|114539291|gb|EAU42411.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506] Length = 122 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR V AL YIHGIG ++ I K + +RRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRAVIALQYIHGIGPSLAKQIMAKANLTEDRRVNDLSDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++QVEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DREHQVEGDLRRETSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89053106|ref|YP_508557.1| 30S ribosomal protein S13 [Jannaschia sp. CCS1] gi|122499557|sp|Q28UT0|RS13_JANSC RecName: Full=30S ribosomal protein S13 gi|88862655|gb|ABD53532.1| SSU ribosomal protein S13P [Jannaschia sp. CCS1] Length = 122 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL Y+ GIG S+ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYVTGIGHTSAAAICEAVGIDVTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYAVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|119373301|gb|ABL68894.1| SSU ribosomal protein S13P [Paracoccus denitrificans PD1222] Length = 128 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP KRV AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I Sbjct: 7 VARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 67 DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 126 Query: 121 KR 122 K+ Sbjct: 127 KK 128 >gi|149202866|ref|ZP_01879837.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035] gi|149143412|gb|EDM31448.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035] Length = 122 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC L+I RRV++L ++E + +R+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHASAKSICEALSIDVSRRVNELSDAEALALREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114767224|ref|ZP_01446089.1| 30S ribosomal protein S13 [Pelagibaca bermudensis HTCC2601] gi|114540634|gb|EAU43705.1| 30S ribosomal protein S13 [Roseovarius sp. HTCC2601] Length = 122 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+Q IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHTSAQQICEAVNIDATRRVNELSDTEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114771245|ref|ZP_01448665.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255] gi|114548170|gb|EAU51057.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255] Length = 122 Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV AL YI GIG S+ ICN I RR+++L ++E++ IR+ I Sbjct: 1 MARIAGVNLPTHKRVPIALTYITGIGPASADKICNGTKIDAARRINELSDAEILSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 DANFEVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|259416113|ref|ZP_05740033.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B] gi|259347552|gb|EEW59329.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B] Length = 122 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDVTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DATFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149915867|ref|ZP_01904391.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b] gi|149810190|gb|EDM70036.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b] Length = 122 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +KRV AL YI GIG S++ IC + I RRV++L ++E++ +R+ + Sbjct: 1 MARIAGVNIPTSKRVPIALTYITGIGHASAKAICEAVGIDQSRRVNELSDAELLAVREHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254452139|ref|ZP_05065576.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238] gi|198266545|gb|EDY90815.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238] Length = 122 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+Q IC ++I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAQAICEAVSIDVARRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +YQVEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 61 DANYQVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|85374441|ref|YP_458503.1| 30S ribosomal protein S13 [Erythrobacter litoralis HTCC2594] gi|122544188|sp|Q2N9D5|RS13_ERYLH RecName: Full=30S ribosomal protein S13 gi|84787524|gb|ABC63706.1| ribosomal protein S13 [Erythrobacter litoralis HTCC2594] Length = 122 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L + EV+++R+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTTAVKIADKLGIDHARRVQDLTDEEVLRLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D VEGDLRR AMNIKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K + Sbjct: 61 DEDLMVEGDLRRETAMNIKRLMDLKSYRGLRHRNGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|85706697|ref|ZP_01037789.1| 30S ribosomal protein S13 [Roseovarius sp. 217] gi|85668755|gb|EAQ23624.1| 30S ribosomal protein S13 [Roseovarius sp. 217] Length = 122 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC L I RRV++L ++E + +R+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHSSAKSICEALNIDTSRRVNELSDAEALALREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRRESQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159042863|ref|YP_001531657.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12] gi|157910623|gb|ABV92056.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12] Length = 147 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVN+P KR AL YI GIG S+Q IC + I RR+++L ++E++ IR+ I Sbjct: 26 LARIAGVNLPTGKRTPIALTYITGIGLSSAQAICEAVGIEESRRLNELSDAEILAIREHI 85 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 86 DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 145 Query: 121 KR 122 K+ Sbjct: 146 KK 147 >gi|83949765|ref|ZP_00958498.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM] gi|83837664|gb|EAP76960.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM] Length = 122 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTHKRVPIALTYITGIGNTSAKAICEAVGIDLTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYMVEGDLRRETQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260577157|ref|ZP_05845134.1| ribosomal protein S13 [Rhodobacter sp. SW2] gi|259020631|gb|EEW23950.1| ribosomal protein S13 [Rhodobacter sp. SW2] Length = 122 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/122 (63%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG ++ IC + I RRV+ L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGPHIAEQICEAVGIDRARRVNDLTDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANLTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89070530|ref|ZP_01157819.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516] gi|89043837|gb|EAR50035.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516] Length = 122 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPSSAKAICEAVNIDQTRRVNELSDAEVLSIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRRETQMNIKRLMDLGSYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325294421|ref|YP_004280935.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064869|gb|ADY72876.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 126 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K+V +L YI+GIG K+ IC + I PE+RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPDNKKVPYSLAYIYGIGIKTGFKICEEAGIDPEKRVKDLTEEEIAKIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLR+ +AMNIKRLM++GCYRG+RHR GLPVRGQRT TNARTRK Sbjct: 61 ETEYKVEGDLRKEIAMNIKRLMEIGCYRGIRHRLGLPVRGQRTRTNARTRK 111 >gi|85709031|ref|ZP_01040097.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1] gi|85690565|gb|EAQ30568.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1] Length = 122 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 77/122 (63%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL IP RV L + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTTAVQIADKLGIPHTARVQDLTDEEVLRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR AMNIKRLMDL YRGLRHR LPVRGQRTHTNARTRK K + Sbjct: 61 DEAYTVEGDLRRNTAMNIKRLMDLRSYRGLRHRNQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|262197165|ref|YP_003268374.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365] gi|262080512|gb|ACY16481.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365] Length = 127 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + S ++ +K I P++R L E++V IR I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRRRSNELLDKAGITPDKRTDDLDENDVRMIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANYKVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRK 111 >gi|108761573|ref|YP_631522.1| 30S ribosomal protein S13 [Myxococcus xanthus DK 1622] gi|123374507|sp|Q1D751|RS13_MYXXD RecName: Full=30S ribosomal protein S13 gi|108465453|gb|ABF90638.1| ribosomal protein S13 [Myxococcus xanthus DK 1622] Length = 127 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 75/116 (64%), Positives = 87/116 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P KR V +L YI+GIG KS+QDI I P R L E + +IR+ I Sbjct: 1 MARIAGIDLPPNKRAVISLQYIYGIGNKSAQDIIAAAGIDPTTRTKDLTEEQARKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 E Y+VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK +G Sbjct: 61 EASYKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRG 116 >gi|258512645|ref|YP_003186079.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479371|gb|ACV59690.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 122 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P +RV L E EV+++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRK 111 >gi|319789263|ref|YP_004150896.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1] gi|317113765|gb|ADU96255.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1] Length = 126 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K+V +L YI+GIG KS IC K + PE+RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPDNKKVPYSLAYIYGIGIKSGFKICEKAGVDPEKRVKDLTEEEIAKIRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLR+ +AMNIKRL+++GCYRG+RHR GLPVRGQRT TNARTRK Sbjct: 61 ENEYKVEGDLRKEIAMNIKRLIEIGCYRGVRHRLGLPVRGQRTRTNARTRK 111 >gi|159901448|ref|YP_001547695.1| 30S ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779] gi|226712747|sp|A9B434|RS13_HERA2 RecName: Full=30S ribosomal protein S13 gi|159894487|gb|ABX07567.1| ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779] Length = 127 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 75/119 (63%), Positives = 92/119 (77%), Gaps = 2/119 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV +L YI+GIG +S +I + I P RV L E EVI++R+ I Sbjct: 1 MARISGVDIPRNKRVEISLTYIYGIGRTTSTEILARTNINPNVRVKDLTEDEVIRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +QDY VEGDLRR V +NIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTR+ GK G A Sbjct: 61 DQDYTVEGDLRRAVQLNIKRLMDIGCYRGIRHRKGLPLRGQRTKTNARTRR--GKKGAA 117 >gi|297618358|ref|YP_003703517.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680] gi|297146195|gb|ADI02952.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680] Length = 123 Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 90/111 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRVV AL YI GIG S++ I + I P+ RV L E E+ +IR+AI Sbjct: 1 MARVAGVDLPRDKRVVVALTYIFGIGRSSAEKIVKETGINPDTRVKDLTEEEIAKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEG+LRR ++MNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DRGYKVEGELRREISMNIKRLIDIGCYRGIRHRRGLPVRGQRTRTNARTRK 111 >gi|167036826|ref|YP_001664404.1| 30S ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039545|ref|YP_001662530.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X514] gi|256752657|ref|ZP_05493509.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1] gi|289579117|ref|YP_003477744.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9] gi|297545304|ref|YP_003677606.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|300915204|ref|ZP_07132519.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561] gi|307266989|ref|ZP_07548505.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1] gi|307725128|ref|YP_003904879.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513] gi|320115248|ref|YP_004185407.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390636|ref|ZP_08212191.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200] gi|226712796|sp|B0KCM5|RS13_THEP3 RecName: Full=30S ribosomal protein S13 gi|226712797|sp|B0K5R8|RS13_THEPX RecName: Full=30S ribosomal protein S13 gi|166853785|gb|ABY92194.1| ribosomal protein S13 [Thermoanaerobacter sp. X514] gi|166855660|gb|ABY94068.1| ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748477|gb|EEU61529.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1] gi|289528830|gb|ADD03182.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9] gi|296843079|gb|ADH61595.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|300888928|gb|EFK84075.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561] gi|306917974|gb|EFN48232.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1] gi|307582189|gb|ADN55588.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513] gi|319928339|gb|ADV79024.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993314|gb|EGD51751.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200] Length = 122 Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 89/111 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S +I K + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEEEVSRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLR+ VAMNIKRLMD+GCYRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRKEVAMNIKRLMDIGCYRGIRHKRGLPVRGQRTRTNARTRK 111 >gi|77918339|ref|YP_356154.1| 30S ribosomal protein S13 [Pelobacter carbinolicus DSM 2380] gi|91207711|sp|Q3A6M3|RS13_PELCD RecName: Full=30S ribosomal protein S13 gi|77544422|gb|ABA87984.1| SSU ribosomal protein S13P [Pelobacter carbinolicus DSM 2380] Length = 122 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 74/111 (66%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG SSQDI K + P R +L E+E QIR I Sbjct: 1 MARIAGIDLPRNKRIEVALTYIYGIGRSSSQDILQKAGVDPNTRTDELTEAEAGQIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + QVEGDLRR V NIKRLMDLGCYRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 DGQMQVEGDLRRVVTGNIKRLMDLGCYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|218289981|ref|ZP_03494158.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1] gi|218239966|gb|EED07153.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1] Length = 122 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P +RV L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRK 111 >gi|325288602|ref|YP_004264783.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271] gi|324964003|gb|ADY54782.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271] Length = 122 Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 74/122 (60%), Positives = 94/122 (77%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV AL YI+GIG S+ I K + P+ RV L + EV +IR+ I Sbjct: 1 MARISGVDIPRDKRVEIALTYIYGIGNSQSKKILEKTQVSPDTRVRDLTDDEVARIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK + +AR Sbjct: 61 DKEYMVEGDLRREVSLNIKRLMEIGCYRGMRHRRGLPVRGQRTKTNARTRKGPAR-AIAR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|237751465|ref|ZP_04581945.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879] gi|229372831|gb|EEO23222.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879] Length = 120 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS+DI N ++I ++RVH L E ++ +I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILNAVSISFDKRVHDLSEDDISKISKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|294675881|ref|YP_003576496.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003] gi|294474701|gb|ADE84089.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003] Length = 122 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++ I + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALQYIHGIGPMFAKQIVEAVGIAEARRVNELTDAEVLAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DAHFTVEGDLRREVSMNIKRLMDLGCYRGLRHRKNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269792768|ref|YP_003317672.1| 30S ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100403|gb|ACZ19390.1| ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 125 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +S+ I + P RR L + E +IR I Sbjct: 1 MARIAGVDLPREKRIEIALTYIYGIGLTTSRKILASTGVDPNRRTKDLTDEEAQRIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK Sbjct: 61 ENNYKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111 >gi|254461772|ref|ZP_05075188.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium HTCC2083] gi|206678361|gb|EDZ42848.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium HTCC2083] Length = 122 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTHKRVPIALTYITGIGPASAKAICEAVKIDETRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 61 DATYNVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126736628|ref|ZP_01752368.1| ribosomal protein S13 [Roseobacter sp. CCS2] gi|126713941|gb|EBA10812.1| ribosomal protein S13 [Roseobacter sp. CCS2] Length = 133 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP AKRV AL YI GIG +++IC + I RRV+QL ++EV+ IR+ I Sbjct: 12 VARIAGVNIPTAKRVPIALTYITGIGNAKAEEICEAVKIDRARRVNQLSDAEVLSIREYI 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 72 DANLMVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|220903957|ref|YP_002479269.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254811146|sp|B8IYL4|RS13_DESDA RecName: Full=30S ribosomal protein S13 gi|219868256|gb|ACL48591.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 122 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 74/122 (60%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + ER + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTAMKILDTTGVNWERSIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ Y+VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQHYKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|20808635|ref|NP_623806.1| 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4] gi|32363349|sp|Q8R7X9|RS13_THETN RecName: Full=30S ribosomal protein S13 gi|20517269|gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4] Length = 122 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 89/111 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRSRSKEILAKAGVNPDTRVRDLTEDEVSKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLR+ VAMNIKRL+D+GCYRG+RH+ GLPVRGQRT TNARTRK Sbjct: 61 EKEYKVEGDLRKEVAMNIKRLIDIGCYRGIRHKLGLPVRGQRTRTNARTRK 111 >gi|147676680|ref|YP_001210895.1| 30S ribosomal protein S13 [Pelotomaculum thermopropionicum SI] gi|189044284|sp|A5D5E5|RS13_PELTS RecName: Full=30S ribosomal protein S13 gi|146272777|dbj|BAF58526.1| ribosomal protein S13 [Pelotomaculum thermopropionicum SI] Length = 123 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 89/111 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +SQ I + + P+ RV L E E+ ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGKPTSQKILAQSGVNPDTRVRNLTEEEINKLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKNYKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|149184336|ref|ZP_01862654.1| ribosomal protein S13 [Erythrobacter sp. SD-21] gi|148831656|gb|EDL50089.1| ribosomal protein S13 [Erythrobacter sp. SD-21] Length = 122 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG + +I +KL I RV L + E++++R+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTKAVEIADKLGIDHATRVQDLTDEELLRVRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR AMNIKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K + Sbjct: 61 DEEHTVEGDLRRETAMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|303328071|ref|ZP_07358510.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3] gi|302861897|gb|EFL84832.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3] Length = 122 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 73/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + ER + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTALKILDSTGVNWERSIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQNFKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153004797|ref|YP_001379122.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5] gi|166231897|sp|A7HBP2|RS13_ANADF RecName: Full=30S ribosomal protein S13 gi|152028370|gb|ABS26138.1| ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5] Length = 127 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 74/118 (62%), Positives = 91/118 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG ++Q IC++ + R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVALQYIYGIGKTTAQAICHRANVDVTTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 EQ +VEGDLRR +++NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V Sbjct: 61 EQAVKVEGDLRREISLNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118 >gi|296131861|ref|YP_003639108.1| 30S ribosomal protein S13 [Thermincola sp. JR] gi|296030439|gb|ADG81207.1| 30S ribosomal protein S13 [Thermincola potens JR] Length = 123 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG ++ I ++ + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGRPTANQILSQTGVNPDTRVRDLTEEEVAKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNYKVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPAKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|51894185|ref|YP_076876.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863] gi|81387945|sp|Q67JW8|RS13_SYMTH RecName: Full=30S ribosomal protein S13 gi|51857874|dbj|BAD42032.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863] Length = 124 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 89/111 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG+ S++I K I P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEAALPYIYGIGWSLSREILKKTGIDPDTRVRDLTEEQVAKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL+R V MNIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DHEYKVEGDLQREVQMNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|225175649|ref|ZP_03729643.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1] gi|225168978|gb|EEG77778.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1] Length = 123 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 90/111 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG K+SQDI ++ A+ + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGRKTSQDILSQSAVNMDTRVRDLTEDEVNRLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR VAMNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DKNYKVEGDLRREVAMNIKRLMEIGSYRGIRHRRGLPVRGQTTKNNARTRK 111 >gi|114567815|ref|YP_754969.1| 30S ribosomal protein S13 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317307|sp|Q0AUK6|RS13_SYNWW RecName: Full=30S ribosomal protein S13 gi|114338750|gb|ABI69598.1| SSU ribosomal protein S13P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 122 Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI GIG SS+ I I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEVSLTYIFGIGRSSSRKILTDAGINPDTRVKDLTEEEVSKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y VEGDLRR V M+IKRLMDLGCYRG+RHRRGLPVRGQ T TNARTRK Sbjct: 61 EKEYHVEGDLRRQVNMDIKRLMDLGCYRGIRHRRGLPVRGQNTKTNARTRK 111 >gi|322381103|ref|ZP_08055106.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154679|gb|EFX46950.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 122 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ AL YI GIG ++Q I N+ + P+ RV L E E+ +IR I Sbjct: 1 MARIAGVDLPRDKRVIIALTYIFGIGKTTAQKIINETGVNPDTRVRDLTEDEISKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKQLKVEGDLRREIALNIKRLVEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111 >gi|32266899|ref|NP_860931.1| 30S ribosomal protein S13 [Helicobacter hepaticus ATCC 51449] gi|81665564|sp|Q7VGC2|RS13_HELHP RecName: Full=30S ribosomal protein S13 gi|32262951|gb|AAP77997.1| ribosomal protein S13 [Helicobacter hepaticus ATCC 51449] Length = 120 Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSSQDI + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSQDILKAVNISFDKRVSDLSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QESYMVEGDLRKKVTMDIKSLMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|220917145|ref|YP_002492449.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1] gi|254811122|sp|B8J884|RS13_ANAD2 RecName: Full=30S ribosomal protein S13 gi|219954999|gb|ACL65383.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1] Length = 128 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 72/118 (61%), Positives = 91/118 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG S++ I + + P R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V Sbjct: 61 EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118 >gi|15807119|ref|NP_295848.1| 30S ribosomal protein S13 [Deinococcus radiodurans R1] gi|32363426|sp|Q9RSJ9|RS13_DEIRA RecName: Full=30S ribosomal protein S13 gi|6459923|gb|AAF11675.1|AE002047_8 ribosomal protein S13 [Deinococcus radiodurans R1] Length = 126 Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG S++I + + P+ RV L E+E +R+AI Sbjct: 1 MARIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKTYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|46579737|ref|YP_010545.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough] gi|120602786|ref|YP_967186.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris DP4] gi|81566848|sp|Q72CF7|RS13_DESVH RecName: Full=30S ribosomal protein S13 gi|158706227|sp|A1VE93|RS13_DESVV RecName: Full=30S ribosomal protein S13 gi|46449152|gb|AAS95804.1| ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough] gi|120563015|gb|ABM28759.1| SSU ribosomal protein S13P [Desulfovibrio vulgaris DP4] gi|311233528|gb|ADP86382.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris RCH1] Length = 122 Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/122 (60%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + R V L EV +IR+ I Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRATALQILDATGVNWTRNVDDLNADEVNEIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPVRGQRTHTNARTRK +G V + Sbjct: 61 EQNHKVEGDLRREISANIKRLMDIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRGTVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254440445|ref|ZP_05053939.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307] gi|198255891|gb|EDY80205.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307] Length = 139 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGVNIP AKRV AL YI GIG S+ IC + I RRV++L ++EV+ IR+ I Sbjct: 18 VARIAGVNIPTAKRVPIALTYITGIGNTSAAAICEAVKIDVTRRVNELSDAEVLAIREHI 77 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 78 DANYMVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 137 Query: 121 KR 122 K+ Sbjct: 138 KK 139 >gi|86158345|ref|YP_465130.1| 30S ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-C] gi|197122363|ref|YP_002134314.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. K] gi|123497979|sp|Q2IJ63|RS13_ANADE RecName: Full=30S ribosomal protein S13 gi|226712688|sp|B4UBC3|RS13_ANASK RecName: Full=30S ribosomal protein S13 gi|85774856|gb|ABC81693.1| SSU ribosomal protein S13P [Anaeromyxobacter dehalogenans 2CP-C] gi|196172212|gb|ACG73185.1| ribosomal protein S13 [Anaeromyxobacter sp. K] Length = 128 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/118 (61%), Positives = 91/118 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG S++ I + + P R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V Sbjct: 61 EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118 >gi|302344332|ref|YP_003808861.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075] gi|301640945|gb|ADK86267.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075] Length = 123 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG +S+ I + + P+ + L EV +IRQ I Sbjct: 1 MARIAGIDLPRNKRIEVALTYIYGIGPSTSKRILDAAGVNPDTKSDALNSEEVNRIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK + V + Sbjct: 61 DEAYKVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSRAVVGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|152989995|ref|YP_001355717.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2] gi|158706256|sp|A6Q1K1|RS13_NITSB RecName: Full=30S ribosomal protein S13 gi|151421856|dbj|BAF69360.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2] Length = 120 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL Y++GIG +S+ I + + I ++RV++L E EV I + I Sbjct: 1 MARIAGVDLPKNKRIEYALPYVYGIGLTTSRKILDAVGISYDKRVYELTEDEVAAINKHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y VEGDLRR VAM+IK LMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 RENYMVEGDLRRKVAMDIKALMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|312880346|ref|ZP_07740146.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260] gi|310783637|gb|EFQ24035.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260] Length = 125 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG SS+ I + P+ R L + E +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLTSSKKILAATGVNPDTRTKDLTDEEAQRIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK Sbjct: 61 ENQFKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111 >gi|162456222|ref|YP_001618589.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56'] gi|189044298|sp|A9FGC9|RS13_SORC5 RecName: Full=30S ribosomal protein S13 gi|161166804|emb|CAN98109.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56'] Length = 126 Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 74/121 (61%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K V AL Y+ GIG + IC K IP +RV +L ++EV IR + Sbjct: 1 MARIAGVDLPRRKHVAYALPYLFGIGRTLALQICEKTNIPQNKRVEELSDAEVKAIRDLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP GQRTHTNARTRK KG + R Sbjct: 61 DAEYKVEGDLRREVQLNIKRLMDLGCYRGLRHRRGLPANGQRTHTNARTRKGPRKGMLQR 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|258513665|ref|YP_003189887.1| 30S ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771] gi|257777370|gb|ACV61264.1| ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771] Length = 123 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 89/111 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG K+SQ I K + P+ R+ L E E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGKKTSQKIIEKTGVNPDTRIRNLTEDEINKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++ ++EGDLRR +A+NIKRL+++GCYRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 EKNCKIEGDLRREIALNIKRLIEIGCYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|57242512|ref|ZP_00370450.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195] gi|315639082|ref|ZP_07894250.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21] gi|57016797|gb|EAL53580.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195] gi|315480858|gb|EFU71494.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21] Length = 121 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|57238605|ref|YP_179736.1| 30S ribosomal protein S13 [Campylobacter jejuni RM1221] gi|86152230|ref|ZP_01070441.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596382|ref|ZP_01099619.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 84-25] gi|148925736|ref|ZP_01809424.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8486] gi|153951257|ref|YP_001398872.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. doylei 269.97] gi|157415812|ref|YP_001483068.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81116] gi|205355606|ref|ZP_03222376.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563181|ref|YP_002344961.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956976|ref|ZP_06374448.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336] gi|315125000|ref|YP_004067004.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|32363423|sp|Q9PM83|RS13_CAMJE RecName: Full=30S ribosomal protein S13 gi|81353183|sp|Q5HSJ9|RS13_CAMJR RecName: Full=30S ribosomal protein S13 gi|166231908|sp|A7H5U2|RS13_CAMJD RecName: Full=30S ribosomal protein S13 gi|172047191|sp|A8FNQ4|RS13_CAMJ8 RecName: Full=30S ribosomal protein S13 gi|57167409|gb|AAW36188.1| ribosomal protein S13/S18 [Campylobacter jejuni RM1221] gi|85840719|gb|EAQ57970.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 260.94] gi|88191223|gb|EAQ95195.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360888|emb|CAL35689.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845746|gb|EDK22837.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8486] gi|152938703|gb|ABS43444.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. doylei 269.97] gi|157386776|gb|ABV53091.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81116] gi|205346383|gb|EDZ33016.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8421] gi|283791477|gb|EFC30274.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336] gi|284926787|gb|ADC29139.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni IA3902] gi|307748449|gb|ADN91719.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni M1] gi|315018722|gb|ADT66815.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315059043|gb|ADT73372.1| SSU ribosomal protein S13p/S18 [Campylobacter jejuni subsp. jejuni S3] gi|315927662|gb|EFV06993.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929463|gb|EFV08660.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 305] gi|315931271|gb|EFV10241.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 327] Length = 121 Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|89893242|ref|YP_516729.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51] gi|219666515|ref|YP_002456950.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense DCB-2] gi|122483916|sp|Q250K7|RS13_DESHY RecName: Full=30S ribosomal protein S13 gi|254811147|sp|B8G1Z1|RS13_DESHD RecName: Full=30S ribosomal protein S13 gi|89332690|dbj|BAE82285.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51] gi|219536775|gb|ACL18514.1| ribosomal protein S13 [Desulfitobacterium hafniense DCB-2] Length = 123 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG ++Q I + + PE R+ L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIYGIGLPTAQKILARTGVNPETRIRDLSEEEVNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DKEIKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|269837091|ref|YP_003319319.1| 30S ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745] gi|269786354|gb|ACZ38497.1| ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745] Length = 124 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +S+ + + + P+ RV L + EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGLSTSKKLLERTGVSPDTRVRDLTDDEVGRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++ VEGDLRR + MNIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKEMVVEGDLRREINMNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|283953796|ref|ZP_06371327.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414] gi|283794837|gb|EFC33575.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414] Length = 121 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFASRKILDKVGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|222823136|ref|YP_002574709.1| 30S ribosomal protein S13 [Campylobacter lari RM2100] gi|254811136|sp|B9KEH3|RS13_CAMLR RecName: Full=30S ribosomal protein S13 gi|222538357|gb|ACM63458.1| 30S ribosomal protein S13 [Campylobacter lari RM2100] Length = 121 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLHTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|117924177|ref|YP_864794.1| 30S ribosomal protein S13 [Magnetococcus sp. MC-1] gi|158706244|sp|A0L5Z5|RS13_MAGSM RecName: Full=30S ribosomal protein S13 gi|117607933|gb|ABK43388.1| SSU ribosomal protein S13P [Magnetococcus sp. MC-1] Length = 122 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GI S++ I + I P+ RV L ++EV Q+R I Sbjct: 1 MARIAGVNIPVNKRVEIALTYIYGICRDSAKRITKEAGIEPQVRVSDLTDAEVAQLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++ VEGDLRR +AMN+KRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK Sbjct: 61 DNNHTVEGDLRRQIAMNVKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRK 111 >gi|57504896|ref|ZP_00370871.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228] gi|305432397|ref|ZP_07401559.1| 30S ribosomal protein S13 [Campylobacter coli JV20] gi|57019324|gb|EAL56026.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228] gi|304444436|gb|EFM37087.1| 30S ribosomal protein S13 [Campylobacter coli JV20] Length = 121 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 [Campylobacter fetus subsp. fetus 82-40] gi|158706219|sp|A0RM33|RS13_CAMFF RecName: Full=30S ribosomal protein S13 gi|118414680|gb|ABK83100.1| ribosomal protein S13p/S18e [Campylobacter fetus subsp. fetus 82-40] Length = 122 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I N + I ++RV++L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILNAVGISYDKRVYELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QEHYMVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|308272956|emb|CBX29560.1| 30S ribosomal protein S13 [uncultured Desulfobacterium sp.] Length = 127 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KRV L YI+GIG S+ I +KL I P+ +V QL E+E+ IRQ I Sbjct: 1 MARISGVDLPKHKRVEIGLTYIYGIGRSMSKSILSKLNINPDTKVDQLSETEINSIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG+LR ++MNIKRLMDLGCYRGLRHR+ LPVRGQRT TN+RTRK Sbjct: 61 NTEYKVEGELRTDISMNIKRLMDLGCYRGLRHRKSLPVRGQRTKTNSRTRK 111 >gi|78221870|ref|YP_383617.1| 30S ribosomal protein S13 [Geobacter metallireducens GS-15] gi|91207703|sp|Q39XY2|RS13_GEOMG RecName: Full=30S ribosomal protein S13 gi|78193125|gb|ABB30892.1| SSU ribosomal protein S13P [Geobacter metallireducens GS-15] Length = 122 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG ++Q I + + + R L E+EV +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRTTAQKILAESGVSVDTRTDSLTEAEVAKIREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 DKNIKVEGDLRRDVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|313903126|ref|ZP_07836520.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965] gi|317123072|ref|YP_004103075.1| 30S ribosomal protein S13P [Thermaerobacter marianensis DSM 12885] gi|313466628|gb|EFR62148.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965] gi|315593052|gb|ADU52348.1| SSU ribosomal protein S13P [Thermaerobacter marianensis DSM 12885] Length = 126 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K + P+ RV L E E+ ++R I Sbjct: 1 MARIAGVDLPRDKRVEYALPYIYGIGLSRSREILAKAQVNPDTRVRDLTEDEINRLRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+DY+VEG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ERDYKVEGELRSEVQRNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|57239315|ref|YP_180451.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58579281|ref|YP_197493.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58617335|ref|YP_196534.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel] gi|75356679|sp|Q5FFR9|RS13_EHRRG RecName: Full=30S ribosomal protein S13 gi|81352862|sp|Q5HAU3|RS13_EHRRW RecName: Full=30S ribosomal protein S13 gi|57161394|emb|CAH58318.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58416947|emb|CAI28060.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel] gi|58417907|emb|CAI27111.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] Length = 123 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRVVIALTYIYGIGISLANKICESCNIDHNIRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK + VA Sbjct: 61 RENYVVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSRLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297623299|ref|YP_003704733.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093] gi|297164479|gb|ADI14190.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093] Length = 126 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ++ + + P+ RV L E+EV ++R+ + Sbjct: 1 MARIAGVDLPRDKRIEHALPYIYGIGLSRSQEVLAQAGVNPDTRVKDLAEAEVARLREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y+VEGDLRR + +NIKRLMD+G YRGLRHRRGLPVRGQ + TNARTRK Sbjct: 61 EKTYKVEGDLRREIQLNIKRLMDIGSYRGLRHRRGLPVRGQSSKTNARTRK 111 >gi|86152866|ref|ZP_01071071.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613746|ref|YP_001001235.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81-176] gi|167006128|ref|ZP_02271886.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81-176] gi|158706220|sp|A1W1J4|RS13_CAMJJ RecName: Full=30S ribosomal protein S13 gi|85843751|gb|EAQ60961.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249756|gb|EAQ72715.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 81-176] Length = 121 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I +RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYNKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|149922190|ref|ZP_01910628.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1] gi|149816930|gb|EDM76415.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1] Length = 123 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI+G+G +SQ+I K + R L E ++ IR+ I Sbjct: 1 MARISGVDLPRNKRVEIALTYIYGVGRTTSQEILVKAGVGGSIRTDDLNEEQLSAIRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY+VEGDLRR V IKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 ESDYKVEGDLRREVQTKIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPKRGQVAM 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|73667207|ref|YP_303223.1| 30S ribosomal protein S13 [Ehrlichia canis str. Jake] gi|91207702|sp|Q3YRN0|RS13_EHRCJ RecName: Full=30S ribosomal protein S13 gi|72394348|gb|AAZ68625.1| SSU ribosomal protein S13P [Ehrlichia canis str. Jake] Length = 123 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 76/122 (62%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRVVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK K VA Sbjct: 61 RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294101654|ref|YP_003553512.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261] gi|293616634|gb|ADE56788.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261] Length = 125 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +S I I P+ RV L E E +IR+ I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLPTSHLILAATGINPDTRVKDLTEEEAQRIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V MNIKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK Sbjct: 61 QEHYKVEGDLRREVTMNIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRK 111 >gi|222056682|ref|YP_002539044.1| ribosomal protein S13 [Geobacter sp. FRC-32] gi|254811149|sp|B9M6F5|RS13_GEOSF RecName: Full=30S ribosomal protein S13 gi|221565971|gb|ACM21943.1| ribosomal protein S13 [Geobacter sp. FRC-32] Length = 122 Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG +SQ I + + R L ESEV +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRSTSQKILAEAGVDANTRSDNLTESEVAKIRENI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK Sbjct: 61 DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRK 111 >gi|88658171|ref|YP_507248.1| 30S ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas] gi|123493519|sp|Q2GH35|RS13_EHRCR RecName: Full=30S ribosomal protein S13 gi|88599628|gb|ABD45097.1| ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas] Length = 123 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/122 (61%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+V AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK K VA Sbjct: 61 RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|94985943|ref|YP_605307.1| 30S ribosomal protein S13 [Deinococcus geothermalis DSM 11300] gi|158706226|sp|Q1IX96|RS13_DEIGD RecName: Full=30S ribosomal protein S13 gi|94556224|gb|ABF46138.1| ribosomal protein S13 [Deinococcus geothermalis DSM 11300] Length = 126 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++++ + + P+ RV L E+E +R+AI Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLTRAKEVLARTGVNPDTRVKNLSETEQSALREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|251799616|ref|YP_003014347.1| ribosomal protein S13 [Paenibacillus sp. JDR-2] gi|247547242|gb|ACT04261.1| ribosomal protein S13 [Paenibacillus sp. JDR-2] Length = 122 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI GIG +SQ I + P+ RV L E E+ ++R+AI Sbjct: 1 MARIAGVDIPRDKRVEIALTYIFGIGKTTSQKILASTGVNPDTRVRDLTEDELAKLREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111 >gi|86149387|ref|ZP_01067618.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840169|gb|EAQ57427.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni CF93-6] Length = 121 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++R H+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRFHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|224373706|ref|YP_002608078.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH] gi|254811159|sp|B9L6U0|RS13_NAUPA RecName: Full=30S ribosomal protein S13 gi|223589832|gb|ACM93568.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH] Length = 122 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K++ AL YI+GIG +S+ I I PE+RV++L E EV + + I Sbjct: 1 MARIAGIDLPKKKKIEYALPYIYGIGLTTSRKILKDTGIDPEKRVYELTEDEVSILNKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 QSNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|118579142|ref|YP_900392.1| 30S ribosomal protein S13 [Pelobacter propionicus DSM 2379] gi|158706257|sp|A1ALW4|RS13_PELPD RecName: Full=30S ribosomal protein S13 gi|118501852|gb|ABK98334.1| SSU ribosomal protein S13P [Pelobacter propionicus DSM 2379] Length = 122 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+V AL YI+GIG +++ I + P R L E++V +R I Sbjct: 1 MARIAGIDLPKNKRIVIALTYIYGIGNSTAEKILEATNVDPNTRTDNLTEADVSHLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 DRNIKVEGDLRREISMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|78043008|ref|YP_361093.1| 30S ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901] gi|91207693|sp|Q3A9U1|RS13_CARHZ RecName: Full=30S ribosomal protein S13 gi|77995123|gb|ABB14022.1| ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901] Length = 123 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I K I P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEG+LRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 EKNYKVEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNARTRK 111 >gi|15645909|ref|NP_208088.1| 30S ribosomal protein S13 [Helicobacter pylori 26695] gi|108563666|ref|YP_627982.1| 30S ribosomal protein S13 [Helicobacter pylori HPAG1] gi|188528084|ref|YP_001910771.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470] gi|207108654|ref|ZP_03242816.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_CA4C1] gi|208435194|ref|YP_002266860.1| ribosomal protein S13 [Helicobacter pylori G27] gi|210135455|ref|YP_002301894.1| 30S ribosomal protein S13 [Helicobacter pylori P12] gi|217032050|ref|ZP_03437550.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128] gi|217033615|ref|ZP_03439043.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10] gi|298735679|ref|YP_003728204.1| 30S ribosomal protein S13 [Helicobacter pylori B8] gi|308183406|ref|YP_003927533.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4] gi|308185048|ref|YP_003929181.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180] gi|2500456|sp|P56020|RS13_HELPY RecName: Full=30S ribosomal protein S13 gi|123373689|sp|Q1CRW4|RS13_HELPH RecName: Full=30S ribosomal protein S13 gi|226712744|sp|B6JND6|RS13_HELP2 RecName: Full=30S ribosomal protein S13 gi|226712745|sp|B5Z8U5|RS13_HELPG RecName: Full=30S ribosomal protein S13 gi|226712746|sp|B2UV59|RS13_HELPS RecName: Full=30S ribosomal protein S13 gi|2314462|gb|AAD08339.1| ribosomal protein S13 (rps13) [Helicobacter pylori 26695] gi|107837439|gb|ABF85308.1| ribosomal protein S13 [Helicobacter pylori HPAG1] gi|188144324|gb|ACD48741.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470] gi|208433123|gb|ACI27994.1| ribosomal protein S13 [Helicobacter pylori G27] gi|210133423|gb|ACJ08414.1| 30S ribosomal protein S13 [Helicobacter pylori P12] gi|216943961|gb|EEC23395.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10] gi|216946198|gb|EEC24806.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128] gi|261838615|gb|ACX98381.1| ribosomal protein S13 [Helicobacter pylori 51] gi|261840011|gb|ACX99776.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52] gi|297380478|gb|ADI35365.1| 30S ribosomal protein S13 [Helicobacter pylori v225d] gi|298354868|emb|CBI65740.1| small subunit ribosomal protein S13 [Helicobacter pylori B8] gi|308060968|gb|ADO02864.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180] gi|308062581|gb|ADO04469.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20] gi|308064073|gb|ADO05960.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464] gi|308065591|gb|ADO07483.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4] gi|317009979|gb|ADU80559.1| 30S ribosomal protein S13 [Helicobacter pylori India7] gi|317011496|gb|ADU85243.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7] gi|317014687|gb|ADU82123.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24] gi|317178035|dbj|BAJ55824.1| 30S ribosomal protein S13 [Helicobacter pylori F16] gi|317181018|dbj|BAJ58804.1| 30S ribosomal protein S13 [Helicobacter pylori F32] Length = 120 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|218885210|ref|YP_002434531.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226712732|sp|B8DNK6|RS13_DESVM RecName: Full=30S ribosomal protein S13 gi|218756164|gb|ACL07063.1| ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 122 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/122 (58%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + R + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTALQILDVTGVDWSRNIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQNHKVEGDLRREISSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|289548517|ref|YP_003473505.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484] gi|289182134|gb|ADC89378.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484] Length = 126 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL Y++GIG+ +++IC K IP +R+ +L E+ IR+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYLYGIGWSRAREICEKTGIPCTKRLGELTPDELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T TNARTRK Sbjct: 61 EQNYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRTNARTRK 111 >gi|187933579|ref|YP_001884499.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B] gi|188589031|ref|YP_001919698.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska E43] gi|251779722|ref|ZP_04822642.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226712717|sp|B2UYD6|RS13_CLOBA RecName: Full=30S ribosomal protein S13 gi|226712718|sp|B2TIK1|RS13_CLOBB RecName: Full=30S ribosomal protein S13 gi|187721732|gb|ACD22953.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B] gi|188499312|gb|ACD52448.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska E43] gi|243084037|gb|EES49927.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 122 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +SQ I + I P+ RV L E EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLSTSQKILSTTGISPDARVKDLSEDEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|224437306|ref|ZP_03658278.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] gi|313143761|ref|ZP_07805954.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] gi|313128792|gb|EFR46409.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] Length = 120 Score = 144 bits (362), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS+DI + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILKAVNISFDKRVFDLSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|253577205|ref|ZP_04854525.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843449|gb|EES71477.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str. D14] Length = 122 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKTTGINPDTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKTVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111 >gi|46199605|ref|YP_005272.1| 30S ribosomal protein S13 [Thermus thermophilus HB27] gi|55981636|ref|YP_144933.1| 30S ribosomal protein S13 [Thermus thermophilus HB8] gi|24212669|sp|P80377|RS13_THET8 RecName: Full=30S ribosomal protein S13 gi|50401368|sp|P62655|RS13_THET2 RecName: Full=30S ribosomal protein S13 gi|10835597|pdb|1FJG|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096406|pdb|1HR0|M Chain M, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|13399804|pdb|1HNW|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399826|pdb|1HNX|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399848|pdb|1HNZ|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278022|pdb|1GIX|P Chain P, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|14278068|pdb|1IBK|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278089|pdb|1IBL|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278113|pdb|1IBM|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|15826132|pdb|1JGO|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826157|pdb|1JGP|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826182|pdb|1JGQ|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|20663898|pdb|1J5E|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|24987759|pdb|1MJ1|P Chain P, Fitting The Ternary Complex Of Ef-TuTRNAGTP AND RIBOSOMAL Proteins Into A 13 A Cryo-Em Map Of The Coli 70s Ribosome gi|27065888|pdb|1N32|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065915|pdb|1N33|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065942|pdb|1N34|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065968|pdb|1N36|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|28373711|pdb|1ML5|P Chain P, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|58177412|pdb|1XMO|M Chain M, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177435|pdb|1XMQ|M Chain M, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177476|pdb|1XNQ|M Chain M, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177499|pdb|1XNR|M Chain M, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361066|pdb|1YL4|P Chain P, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192248|pdb|2B64|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192311|pdb|2B9M|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192367|pdb|2B9O|M Chain M, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|110591335|pdb|2F4V|M Chain M, 30s Ribosome + Designer Antibiotic gi|116667666|pdb|2HHH|M Chain M, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668209|pdb|2J00|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668270|pdb|2J02|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389724|pdb|2HGI|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389781|pdb|2HGP|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389837|pdb|2HGR|P Chain P, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242720|pdb|2OW8|NN Chain n, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243630|pdb|2UU9|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243657|pdb|2UUA|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243684|pdb|2UUB|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243711|pdb|2UUC|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243850|pdb|2UXC|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836420|pdb|2UXB|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836497|pdb|2V46|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836553|pdb|2V48|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430912|pdb|2UXD|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285951|pdb|2QNH|NN Chain n, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|186972861|pdb|2VQE|M Chain M, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972884|pdb|2VQF|M Chain M, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|209156508|pdb|3D5A|M Chain M, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156564|pdb|3D5C|M Chain M, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938831|pdb|2JL5|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938889|pdb|2JL7|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766785|pdb|3F1E|M Chain M, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766841|pdb|3F1G|M Chain M, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887386|pdb|2WDG|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887411|pdb|2WDH|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887500|pdb|2WDK|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887557|pdb|2WDM|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823541|pdb|2WH1|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823600|pdb|2WH3|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099998|pdb|3HUW|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100054|pdb|3HUY|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824496|pdb|2WRI|M Chain M, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824558|pdb|2WRK|M Chain M, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824620|pdb|2WRN|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824679|pdb|2WRQ|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307179|pdb|3KIQ|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307237|pdb|3KIS|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307295|pdb|3KIU|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307353|pdb|3KIX|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965616|pdb|3KNH|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526694|pdb|3KNJ|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526719|pdb|3KNL|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526744|pdb|3KNN|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979516|pdb|3I8G|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979541|pdb|3I8H|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979600|pdb|3I9B|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979654|pdb|3I9D|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982087|pdb|2X9R|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982146|pdb|2X9T|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567974|pdb|2XFZ|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568032|pdb|2XG1|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776624|pdb|3OTO|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320247|pdb|3OGE|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320268|pdb|3OGY|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320349|pdb|3OHC|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320370|pdb|3OHD|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320451|pdb|3OHY|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320502|pdb|3OI0|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320553|pdb|3OI2|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320604|pdb|3OI4|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207685|pdb|2XQD|M Chain M, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754011|pdb|2XSY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754126|pdb|2XUY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533414|pdb|2Y0U|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533473|pdb|2Y0W|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533532|pdb|2Y0Y|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533591|pdb|2Y10|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533650|pdb|2Y12|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533709|pdb|2Y14|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533768|pdb|2Y16|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533827|pdb|2Y18|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|4519420|dbj|BAA75546.1| ribosomal protein S13 [Thermus thermophilus] gi|46197231|gb|AAS81645.1| SSU ribosomal protein S13P [Thermus thermophilus HB27] gi|55773049|dbj|BAD71490.1| 30S ribosomal protein S13 [Thermus thermophilus HB8] Length = 126 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|254779838|ref|YP_003057944.1| 30S ribosomal protein S13 [Helicobacter pylori B38] gi|254001750|emb|CAX29981.1| 30S ribosomal subunit protein S13 [Helicobacter pylori B38] gi|317178413|dbj|BAJ56201.1| 30S ribosomal protein S13 [Helicobacter pylori F30] Length = 120 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + + ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|317182542|dbj|BAJ60326.1| 30S ribosomal protein S13 [Helicobacter pylori F57] Length = 120 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQGYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|304315966|ref|YP_003851111.1| 30S ribosomal protein S13 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|323706476|ref|ZP_08118037.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum LX-11] gi|302777468|gb|ADL68027.1| 30S ribosomal protein S13 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|323534196|gb|EGB23986.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum LX-11] Length = 122 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG S +I K + P+ RV L E EV ++R I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEVSRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR V++NIKRL+D+GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTNARTRK 111 >gi|317013083|gb|ADU83691.1| 30S ribosomal protein S13 [Helicobacter pylori Lithuania75] Length = 120 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELNEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|39997926|ref|NP_953877.1| 30S ribosomal protein S13 [Geobacter sulfurreducens PCA] gi|81701334|sp|Q749B0|RS13_GEOSL RecName: Full=30S ribosomal protein S13 gi|39984871|gb|AAR36227.1| ribosomal protein S13 [Geobacter sulfurreducens PCA] gi|298506864|gb|ADI85587.1| ribosomal protein S13 [Geobacter sulfurreducens KN400] Length = 122 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI GIG ++Q I + + + R L ESEV +IR I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR V+M+IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 DKNLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|188584862|ref|YP_001916407.1| SSU ribosomal protein S13P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226712768|sp|B2A4P7|RS13_NATTJ RecName: Full=30S ribosomal protein S13 gi|179349549|gb|ACB83819.1| SSU ribosomal protein S13P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 121 Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +++I + + + RV L E EV ++R I Sbjct: 1 MARIAGVDLPRNKRVAIGLTYIYGIGHSKAEEIVEQTGVSTDTRVKDLTEDEVNRLRSTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR ++MNIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DNDYTVEGDLRREISMNIKRLMEIGCYRGLRHRRGLPVRGQSTKNNARTRK 111 >gi|260893347|ref|YP_003239444.1| 30S ribosomal protein S13 [Ammonifex degensii KC4] gi|260865488|gb|ACX52594.1| 30S ribosomal protein S13 [Ammonifex degensii KC4] Length = 123 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG S++ I K + P+ RV L E E+ +IR+ I Sbjct: 1 MARIAGVDLPKDKRVEIALTYIYGIGRSSAKKILEKTGVNPDTRVKDLTEDEIARIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR +AMNI+RL+D+ CYRG+RH RGLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREIAMNIRRLIDIRCYRGIRHIRGLPVRGQRTRTNARTRK 111 >gi|34558007|ref|NP_907822.1| 30S ribosomal protein S13 [Wolinella succinogenes DSM 1740] gi|81653421|sp|Q7M8F4|RS13_WOLSU RecName: Full=30S ribosomal protein S13 gi|34483725|emb|CAE10722.1| 30S RIBOSOMAL PROTEIN S13 [Wolinella succinogenes] Length = 122 Score = 143 bits (360), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG K+S+DI + + I ++RV +L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKTSRDILSAVNISLDKRVQELSEDEVSLISKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QESYAVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|268680564|ref|YP_003304995.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946] gi|268618595|gb|ACZ12960.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946] Length = 122 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KRV L YI+GIG SS+ I I ++RVH+L E +V IR+ I Sbjct: 1 MARIAGVDLPMKKRVEYGLTYIYGIGLTSSRAILTATGISFDKRVHELSEDDVAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +QVEGDLR+ VAM+IK LMD+G YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QAGFQVEGDLRKKVAMDIKALMDMGSYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|302388737|ref|YP_003824558.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646] gi|302199365|gb|ADL06935.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646] Length = 123 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG S I + + P+ RV L E E+ +R I Sbjct: 1 MARIAGVDLPKDKRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EKNYKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNARTRK 111 >gi|315453713|ref|YP_004073983.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179] gi|315132765|emb|CBY83393.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179] Length = 120 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI +K+ I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILHKVGISLDKRVHELGEDEVSSITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++ VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QANHIVEGDLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|109946780|ref|YP_664008.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba] gi|123173598|sp|Q17ZB7|RS13_HELAH RecName: Full=30S ribosomal protein S13 gi|109714001|emb|CAJ99009.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba] gi|307637967|gb|ADN80417.1| SSU ribosomal protein S13p:S18e [Helicobacter pylori 908] gi|325996572|gb|ADZ51977.1| 30S ribosomal protein S13 [Helicobacter pylori 2018] gi|325998162|gb|ADZ50370.1| 30S ribosomal protein S13 [Helicobacter pylori 2017] Length = 120 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E E I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEASSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|251772515|gb|EES53081.1| ribosomal protein S13 [Leptospirillum ferrodiazotrophum] Length = 124 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KR+ AL YI G+G +SQ I K + P+ RVH L + EV ++R+A+ Sbjct: 1 MARIVGIDLPRNKRIEIALTYIFGVGKPTSQLILKKAGVNPDTRVHALTDDEVAKLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E VEGDLRR ++ NIKR MD+GCY+GLRHR+GLPVRGQRT TNARTRK KG A+ Sbjct: 61 ETTCSVEGDLRREISQNIKRKMDIGCYQGLRHRKGLPVRGQRTKTNARTRKGPKKGIGAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218294779|ref|ZP_03495633.1| ribosomal protein S13 [Thermus aquaticus Y51MC23] gi|218244687|gb|EED11211.1| ribosomal protein S13 [Thermus aquaticus Y51MC23] Length = 126 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGIGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENAWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|315587185|gb|ADU41566.1| 30S ribosomal protein S13 [Helicobacter pylori 35A] Length = 120 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG K+S++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKNSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|320451276|ref|YP_004203372.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01] gi|320151445|gb|ADW22823.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01] Length = 126 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+G+G +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGVGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|317485799|ref|ZP_07944663.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6] gi|316922905|gb|EFV44127.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6] Length = 122 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR AL YI+GIG ++ I + + R + L E+ ++R+ + Sbjct: 1 MARIAGVDLPRGKRADIALTYIYGIGRVTALKILDASGVNWTRGIDDLTAEELNEVRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ Y+VEGDLRR ++MNIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK +G V + Sbjct: 61 EQSYKVEGDLRREISMNIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114778800|ref|ZP_01453607.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1] gi|114550931|gb|EAU53495.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1] Length = 122 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG SS+ I I RV L + EV +IR I Sbjct: 1 MARIAGVNIPTQKRVEIALTYIYGIGHTSSKAILASAGIDVNTRVKDLSDGEVDKIRSLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V M+IKRL DLGCYRGLRHR+GLPVRGQR+ TNARTRK Sbjct: 61 DADYAVEGDLRREVTMSIKRLTDLGCYRGLRHRKGLPVRGQRSKTNARTRK 111 >gi|239787585|emb|CAX84053.1| 30S ribosomal protein S13 [uncultured bacterium] Length = 120 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+ AL YI GIG + S+ I + + E R L E+E +IR I Sbjct: 1 MARIAGVNIPINKRMEVALTYIFGIGPERSKKILKEAGVSTEVRARDLSEAETARIRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++DY VEGDLRR VAMN KRLMDLG YRGLRHRRGLP RGQRTHTNARTRK Sbjct: 61 DKDYVVEGDLRRQVAMNTKRLMDLGTYRGLRHRRGLPTRGQRTHTNARTRK 111 >gi|320335499|ref|YP_004172210.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211] gi|319756788|gb|ADV68545.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211] Length = 126 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG ++++ + + P+ RV L E+E Q+R AI Sbjct: 1 MARIAGVDLPREKRIEIALTYIYGIGLTRAKEVLAQTGVNPDTRVKNLSEAEQGQLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ ++VEGDLR + NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKTFKVEGDLRSEIGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|319955879|ref|YP_004167142.1| SSU ribosomal protein s13p [Nitratifractor salsuginis DSM 16511] gi|319418283|gb|ADV45393.1| SSU ribosomal protein S13P [Nitratifractor salsuginis DSM 16511] Length = 120 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG SS+ I + I ++RV++L ++E IR+ I Sbjct: 1 MARIAGVDLPKNKRMEYALTYIYGIGLTSSRKILDATGISYDKRVYELTDAEAATIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 QEHYMVEGDLRKKVMMDIKTLMDLGNYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|325510514|gb|ADZ22150.1| 30S ribosomal protein S13 [Clostridium acetobutylicum EA 2018] Length = 125 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG SS+ I ++ PE RV L E EV +R I Sbjct: 3 MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 63 NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 113 >gi|322380606|ref|ZP_08054758.1| 30S ribosomal protein S13 [Helicobacter suis HS5] gi|321146928|gb|EFX41676.1| 30S ribosomal protein S13 [Helicobacter suis HS5] Length = 120 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI K+ I ++RVH L E ++ I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|322378757|ref|ZP_08053186.1| 30S ribosomal protein S13 [Helicobacter suis HS1] gi|321148787|gb|EFX43258.1| 30S ribosomal protein S13 [Helicobacter suis HS1] Length = 122 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI K+ I ++RVH L E ++ I + I Sbjct: 3 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 63 QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 113 >gi|115376113|ref|ZP_01463358.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1] gi|310821019|ref|YP_003953377.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1] gi|115366928|gb|EAU65918.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1] gi|309394091|gb|ADO71550.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1] Length = 128 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/116 (61%), Positives = 86/116 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P AKR V +L YI+GIG K++ +IC I R L + + +IR I Sbjct: 1 MARIAGVDLPPAKRAVISLQYIYGIGNKTAHEICAAAGIDLTTRTKDLTDEQARKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 E + +VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTN+RTRK +G Sbjct: 61 EANLKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNSRTRKGPKRG 116 >gi|125975410|ref|YP_001039320.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405] gi|256005303|ref|ZP_05430269.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360] gi|281419372|ref|ZP_06250387.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20] gi|158706224|sp|A3DJJ8|RS13_CLOTH RecName: Full=30S ribosomal protein S13 gi|125715635|gb|ABN54127.1| SSU ribosomal protein S13P [Clostridium thermocellum ATCC 27405] gi|255990739|gb|EEU00855.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360] gi|281406992|gb|EFB37255.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20] gi|316939526|gb|ADU73560.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313] Length = 123 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S +I K I P+ RV L + E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRTLSNEILRKTGINPDTRVKDLTDEEISKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR +A+NIKRLM++GCYRG RHR GLPVRGQRT TNARTRK K GV Sbjct: 61 DKEYKVEGDLRREIALNIKRLMEIGCYRGRRHRAGLPVRGQRTKTNARTRKGPKKTVGVQ 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|148263162|ref|YP_001229868.1| 30S ribosomal protein S13 [Geobacter uraniireducens Rf4] gi|189044277|sp|A5GAU3|RS13_GEOUR RecName: Full=30S ribosomal protein S13 gi|146396662|gb|ABQ25295.1| SSU ribosomal protein S13P [Geobacter uraniireducens Rf4] Length = 122 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG ++Q I + R L ESE+ +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRSTAQKILADAGVDSNTRSDNLTESEIARIRENI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK Sbjct: 61 DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRK 111 >gi|301057490|ref|ZP_07198586.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2] gi|300448418|gb|EFK12087.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2] Length = 122 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG SSQ + + I + + +L ++ IR+ I Sbjct: 1 MARIAGVDLPKGKRIEIALTYIYGIGRTSSQKMLTEAGINWDTKSDELTSEQIASIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR V+MNIKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DEKYTVEGDLRREVSMNIKRLMDLGLYRGLRHRRGLPVRGQRTSTNARTRK 111 >gi|149195171|ref|ZP_01872262.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2] gi|149134723|gb|EDM23208.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2] Length = 122 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K++ AL YI+GIG +S+ I I P +RV++L E EV + + I Sbjct: 1 MARIAGIDLPKNKKIEYALPYIYGIGLTTSRKILKDTGIDPNKRVYELTEDEVSILNKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 QNNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|15896358|ref|NP_349707.1| 30S ribosomal protein S13 [Clostridium acetobutylicum ATCC 824] gi|32363381|sp|Q97EK3|RS13_CLOAB RecName: Full=30S ribosomal protein S13 gi|15026173|gb|AAK81047.1|AE007807_5 Ribosomal protein S13 [Clostridium acetobutylicum ATCC 824] Length = 123 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG SS+ I ++ PE RV L E EV +R I Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|312899069|ref|ZP_07758453.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359] gi|310619854|gb|EFQ03430.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359] Length = 122 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SSQ+I K I P+ RV L E EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSSSQEILAKTGINPDTRVRDLTEDEVQKIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK Sbjct: 61 GEEYKVEGDLRRETALNIKRLIEVNSYRGKRHRSGLPLRGQRTKTNARTRK 111 >gi|288574687|ref|ZP_06393044.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570428|gb|EFC91985.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 122 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI GIG +S+ I + P+ RV L E E ++R I Sbjct: 1 MARISGVDLPREKRVEIGLTYIFGIGLTTSKKILATTGVNPDTRVKDLTEEETQKLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V MNIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 QNGYTVEGDLRREVTMNIKRLMDIGCYRGIRHRQGLPLRGQRTKTNARTRK 111 >gi|291277245|ref|YP_003517017.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198] gi|290964439|emb|CBG40289.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198] Length = 120 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL +I+GIG K S+DI N + I ++RVH L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTHIYGIGLKISRDILNAVNISFDKRVHDLSEDEVSAIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QESYMVEGDLRKKVQMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|226356868|ref|YP_002786608.1| 30S ribosomal protein S13 [Deinococcus deserti VCD115] gi|259494671|sp|C1CXD7|RS13_DEIDV RecName: Full=30S ribosomal protein S13 gi|226318858|gb|ACO46854.1| putative 30S ribosomal protein S13 [Deinococcus deserti VCD115] Length = 126 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ + I + RV L E+E +R AI Sbjct: 1 MARVAGVDLPREKRIEIALTYIYGIGLTRSKEVLAQTGISADTRVKNLTEAEQSTLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ ++VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKTFKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|317131395|ref|YP_004090709.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3] gi|315469374|gb|ADU25978.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3] Length = 122 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV L YI GIG KS+ DI I P+ RV L E +V +R I Sbjct: 1 MARIAGVNLPNEKRVEIGLTYIFGIGRKSADDIIKATGINPDIRVKDLTEEQVSLLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DKEYTIEGDLRRRVALNIKRLVEVGCYRGVRHRKGLPVRGQRTKTNARTRK 111 >gi|288818041|ref|YP_003432388.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] gi|288787440|dbj|BAI69187.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] gi|308751642|gb|ADO45125.1| 30S ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] Length = 126 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL Y++GIG+ S++IC K IP +R+ +L E+ IR+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYLYGIGWSRSREICQKTGIPCTKRLGELTPDELNTIRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y+VEGDLRR V MNIKRLMD+G YRG+RH RGLPVRGQ+T TN+RTRK Sbjct: 61 EQNYKVEGDLRREVQMNIKRLMDMGSYRGIRHSRGLPVRGQQTRTNSRTRK 111 >gi|308070949|ref|YP_003872554.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681] gi|310644174|ref|YP_003948933.1| 30S ribosomal protein s13 [Paenibacillus polymyxa SC2] gi|305860228|gb|ADM72016.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681] gi|309249125|gb|ADO58692.1| 30S ribosomal protein S13 [Paenibacillus polymyxa SC2] Length = 122 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I + I RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKETGISANTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKEVKVEGDLRREISLNIKRLTEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111 >gi|169830461|ref|YP_001716443.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C] gi|226712730|sp|B1I1M4|RS13_DESAP RecName: Full=30S ribosomal protein S13 gi|169637305|gb|ACA58811.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C] Length = 123 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI+GIG S++ + ++ + PE RV L E E+ ++R I Sbjct: 1 MARISGVDLPRDKRVEVALTYIYGIGRSSAKQLLEQVNVNPETRVRDLTEEEISRLRDLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR V++NIKRL+++G YRGLRHRRGLPV GQRT TNARTRK K GV Sbjct: 61 DKEYKVEGDLRREVSLNIKRLIEIGSYRGLRHRRGLPVWGQRTRTNARTRKGPKKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|146329476|ref|YP_001210130.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A] gi|158706228|sp|A5EX97|RS13_DICNV RecName: Full=30S ribosomal protein S13 gi|146232946|gb|ABQ13924.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A] Length = 118 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG +++IC K + P++++ L +SEV +RQ + Sbjct: 1 MARIAGINVPTQKHAVIALTSIYGIGTSRAKEICAKANVAPDKKIRDLSDSEVEALRQVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + YQVEGDLRR V+M+IKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK Sbjct: 61 SE-YQVEGDLRRQVSMDIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|332178478|gb|AEE14167.1| 30S ribosomal protein S13 [Thermodesulfobium narugense DSM 14796] Length = 123 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++ K+ AL YI+GIG + I N + PE+R+ +L E E+I++R + Sbjct: 1 MARIAGVDLAENKKAWVALTYIYGIGKPLAFKILNATGVDPEKRIKELSEDEIIKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR VA NI+RL+DLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EKNYKVEGDLRREVAQNIRRLIDLGTYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|323703523|ref|ZP_08115169.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574] gi|323531514|gb|EGB21407.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574] Length = 123 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR AL YI+GIG ++Q I + + P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRTEIALTYIYGIGRPTAQKILAQTGVNPDTRVKDLTEEEVNKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++ +VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNIKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|317054792|ref|YP_004103259.1| 30S ribosomal protein S13 [Ruminococcus albus 7] gi|315447061|gb|ADU20625.1| 30S ribosomal protein S13 [Ruminococcus albus 7] Length = 122 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL Y++GIG K++ I + + P+ RV + E +V ++R+ I Sbjct: 1 MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|289523343|ref|ZP_06440197.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503035|gb|EFD24199.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 127 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG S++ I I P+ RV L E E+ ++++ I Sbjct: 1 MARIAGIDLPRDKRVEIALTYIYGIGLPSAKKILASTGISPDTRVKDLTEDEINKLQREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR V NIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK Sbjct: 61 ENNHKVEGDLRREVNANIKRLIDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111 >gi|116749014|ref|YP_845701.1| 30S ribosomal protein S13 [Syntrophobacter fumaroxidans MPOB] gi|158706289|sp|A0LIL4|RS13_SYNFM RecName: Full=30S ribosomal protein S13 gi|116698078|gb|ABK17266.1| SSU ribosomal protein S13P [Syntrophobacter fumaroxidans MPOB] Length = 124 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG ++Q I + I + L E+++ IR I Sbjct: 1 MARIAGIDLPKNKRIEIALTYIYGIGRPTAQKILEQANIDGNTKSDDLTENQINSIRHVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DSHYKVEGDLRTEVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 >gi|307718228|ref|YP_003873760.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192] gi|306531953|gb|ADN01487.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192] Length = 121 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG S++ IC K IP E +V +L +V ++RQ I Sbjct: 1 MARIAGVDLPN-KQIQIALTYIYGIGRASARKICEKTGIPYETKVSELTSDQVQKLRQVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 60 ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRK 110 >gi|14278542|pdb|1I94|M Chain M, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278563|pdb|1I95|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278584|pdb|1I96|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278606|pdb|1I97|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|34811541|pdb|1PNS|M Chain M, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811597|pdb|1PNX|M Chain M, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966335|pdb|1VOQ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966388|pdb|1VOS|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966441|pdb|1VOV|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966494|pdb|1VOX|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966547|pdb|1VOZ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|149241287|pdb|2E5L|M Chain M, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction gi|170292340|pdb|2R1G|I Chain I, Coordinates Of The Thermus Thermophilus 30s Components Neighboring Rbfa As Obtained By Fitting Into The Cryo-Em Map Of A 30s-Rbfa Complex gi|224510701|pdb|3FIC|M Chain M, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands gi|226887641|pdb|2ZM6|M Chain M, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Length = 125 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 69/110 (62%), Positives = 84/110 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|315186309|gb|EFU20070.1| SSU ribosomal protein S13P [Spirochaeta thermophila DSM 6578] Length = 121 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG S++ IC + IP E +V +L +V ++RQ I Sbjct: 1 MARIAGVDLPN-KQIQIALTYIYGIGRSSARKICERTGIPYETKVSELTSDQVQKLRQVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y VEG LR VA+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 60 ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411] gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411] Length = 119 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV +PR K++ AL YI+GIG S +I K I P++R H+L E+ +IR I Sbjct: 1 MARIAGVELPRNKKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY+VEG+LR+ VAMNIK LMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 -ADYKVEGELRKEVAMNIKALMDLGNYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|300508617|pdb|3MR8|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508672|pdb|3MS0|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s) Length = 117 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/110 (62%), Positives = 84/110 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|322812562|pdb|3PYN|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812615|pdb|3PYQ|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812668|pdb|3PYS|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812721|pdb|3PYU|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 116 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/110 (62%), Positives = 84/110 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|86609043|ref|YP_477805.1| 30S ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502213|sp|Q2JL76|RS13_SYNJB RecName: Full=30S ribosomal protein S13 gi|86557585|gb|ABD02542.1| ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 127 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 71/111 (63%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG S+ I K I P+ R L ++EV +R + Sbjct: 1 MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTRK Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRK 111 >gi|325678627|ref|ZP_08158237.1| 30S ribosomal protein S13 [Ruminococcus albus 8] gi|324109677|gb|EGC03883.1| 30S ribosomal protein S13 [Ruminococcus albus 8] Length = 122 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL Y++GIG K++ I + + P+ RV + E +V ++R+ I Sbjct: 1 MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|326203870|ref|ZP_08193732.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782] gi|325985968|gb|EGD46802.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782] Length = 122 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S +I K + P+ RV L + E+ +IR+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRPKSNEILVKTGVSPDTRVRDLTDDEINKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR +A+NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREIALNIKRLIEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111 >gi|255994831|ref|ZP_05427966.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989] gi|255993544|gb|EEU03633.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989] Length = 132 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P KR+ L Y++GIG S++I K + P+ RV L E EV +IR+ I Sbjct: 11 MARLAGVDLPNDKRIEIGLTYVYGIGNTKSKEILAKAKVDPDTRVKDLTEDEVGEIRKVI 70 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++ VEGDLRR +MNIKRLM++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 71 ENEHMVEGDLRRENSMNIKRLMEIGCYRGIRHRKGLPVRGQKTKTNARTRK 121 >gi|154148745|ref|YP_001405815.1| 30S ribosomal protein S13 [Campylobacter hominis ATCC BAA-381] gi|166231907|sp|A7HZX4|RS13_CAMHC RecName: Full=30S ribosomal protein S13 gi|153804754|gb|ABS51761.1| ribosomal protein S13p/S18e [Campylobacter hominis ATCC BAA-381] Length = 127 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L YI+GIG +S+ I + I ++RV L E EV IR+ I Sbjct: 1 MARISGVDLPKKKRIEYGLTYIYGIGLFTSRKILDATGISYDKRVADLSEDEVAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ V+MNIK LMDLGCYRGLRH +GLPVRGQ+T TNARTRK Sbjct: 61 QEHYMVEGDLRKEVSMNIKSLMDLGCYRGLRHIKGLPVRGQKTKTNARTRK 111 >gi|84685393|ref|ZP_01013291.1| 30S ribosomal protein S13 [Maritimibacter alkaliphilus HTCC2654] gi|84666550|gb|EAQ13022.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2654] Length = 116 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 71/116 (61%), Positives = 84/116 (72%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 +NIP KRV AL YI GIG S++ IC I RRV++L ++EV+ IR+ I+ +Y V Sbjct: 1 MNIPTHKRVPIALTYITGIGHTSAKSICEATNIDVTRRVNELSDAEVLTIREHIDANYTV 60 Query: 67 EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 EGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K+ Sbjct: 61 EGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGKKK 116 >gi|85858170|ref|YP_460372.1| 30S ribosomal protein S13 [Syntrophus aciditrophicus SB] gi|123515694|sp|Q2LQD2|RS13_SYNAS RecName: Full=30S ribosomal protein S13 gi|85721261|gb|ABC76204.1| SSU ribosomal protein S13P [Syntrophus aciditrophicus SB] Length = 122 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +++I K I + + +L +SE+ IR I Sbjct: 1 MARIAGVDLPKNKRMEIALTYIYGIGRTKAKEILEKAEISFDTKTDELADSEINAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++D++VEGDLRR ++M+IKRLMD+G YRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DRDHKVEGDLRRDISMSIKRLMDVGAYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|95930499|ref|ZP_01313235.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684] gi|95133539|gb|EAT15202.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684] Length = 122 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG +SQ I ++ + R L E+EV QIR+ I Sbjct: 1 MARIAGIDLPKNKRIEVALTYIYGIGRSTSQHILSQAGVDFSTRSDDLTEAEVGQIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +VEGDLRR V+MNIKR+MDLG YRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 DDELKVEGDLRREVSMNIKRMMDLGNYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|224370668|ref|YP_002604832.1| 30S ribosomal protein S13 [Desulfobacterium autotrophicum HRM2] gi|259494673|sp|C0Q9V0|RS13_DESAH RecName: Full=30S ribosomal protein S13 gi|223693385|gb|ACN16668.1| RpsM [Desulfobacterium autotrophicum HRM2] Length = 122 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K V AL YI+GIG SQ I K+ I P + L E +V IR+ I Sbjct: 1 MARIAGVDLPRNKHVEIALTYIYGIGRTRSQQILEKVGINPTLKSDALTEEQVNDIRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D++VEG+LR ++MNIKRLMDLGCYRGLRHR+ LP RGQRT TNARTRK + V + Sbjct: 61 DSDFKVEGELRTQISMNIKRLMDLGCYRGLRHRKSLPCRGQRTSTNARTRKGPKRAAVKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|158520747|ref|YP_001528617.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3] gi|226712731|sp|A8ZV79|RS13_DESOH RecName: Full=30S ribosomal protein S13 gi|158509573|gb|ABW66540.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3] Length = 127 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I NKL+I + +V QL E+E+ IR A+ Sbjct: 1 MARIAGVDLPKRKRVEIGLTYIYGIGRSTSRQILNKLSIDYDTKVDQLTETEINAIRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEG+LR V+MNIKRLMDLGCYRGLRHR+ LP GQRT TNARTRK Sbjct: 61 TNEHKVEGELRTEVSMNIKRLMDLGCYRGLRHRKSLPCHGQRTSTNARTRK 111 >gi|15605671|ref|NP_213046.1| 30S ribosomal protein S13 [Aquifex aeolicus VF5] gi|6226059|sp|O66486|RS13_AQUAE RecName: Full=30S ribosomal protein S13 gi|2982822|gb|AAC06445.1| ribosomal protein S13 [Aquifex aeolicus VF5] Length = 126 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG+ +++IC K IP +RV +L E+ +R+ I Sbjct: 1 MARIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDELNTLRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR V +NIK+L D+GCYRG+RH RGLPVRGQ+T TNARTRK Sbjct: 61 DENYKVEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQQTRTNARTRK 111 >gi|197117347|ref|YP_002137774.1| 30S ribosomal protein S13 [Geobacter bemidjiensis Bem] gi|253701898|ref|YP_003023087.1| 30S ribosomal protein S13 [Geobacter sp. M21] gi|226712741|sp|B5EFS4|RS13_GEOBB RecName: Full=30S ribosomal protein S13 gi|259494680|sp|C6E4N3|RS13_GEOSM RecName: Full=30S ribosomal protein S13 gi|197086707|gb|ACH37978.1| ribosomal protein S13 [Geobacter bemidjiensis Bem] gi|251776748|gb|ACT19329.1| ribosomal protein S13 [Geobacter sp. M21] Length = 122 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ+I + R L E+EV +IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTAAGVDMNTRCDNLTEAEVTKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 61 DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111 >gi|325282665|ref|YP_004255206.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP] gi|324314474|gb|ADY25589.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP] Length = 125 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + I + R+ L E+E +R AI Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTRSREILERTGINADTRIKDLSEAEQSTLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|134298118|ref|YP_001111614.1| 30S ribosomal protein S13 [Desulfotomaculum reducens MI-1] gi|172044236|sp|A4J136|RS13_DESRM RecName: Full=30S ribosomal protein S13 gi|134050818|gb|ABO48789.1| SSU ribosomal protein S13P [Desulfotomaculum reducens MI-1] Length = 123 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR AL YI+GIG ++Q I + + P+ R+ L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRAEIALTYIYGIGKPTAQKILAQTGVNPDTRIKDLTEEEVNKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKNTKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111 >gi|322418388|ref|YP_004197611.1| 30S ribosomal protein S13 [Geobacter sp. M18] gi|320124775|gb|ADW12335.1| 30S ribosomal protein S13 [Geobacter sp. M18] Length = 122 Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ+I + R L E+EV +IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTATGVDMNTRCDNLTEAEVAKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 61 DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111 >gi|330814178|ref|YP_004358417.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487273|gb|AEA81678.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp. IMCC9063] Length = 127 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+N+P K+V AL YI+GIG ++ IC +L I +RV+ L E EV+++R+ I Sbjct: 1 MARISGINLPLNKQVYIALQYIYGIGDHYAEKICKELNIDRSKRVNNLTEDEVLKVRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRTH+NARTRK Sbjct: 61 DKNYSVEGDLRRDISLNIKRLRDLGTYRGTRHRKKLPVRGQRTHSNARTRK 111 >gi|167629493|ref|YP_001679992.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1] gi|226712743|sp|B0TC82|RS13_HELMI RecName: Full=30S ribosomal protein S13 gi|167592233|gb|ABZ83981.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1] Length = 123 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI GIG ++ I + I P+ R L + EV ++R+ I Sbjct: 1 MARIAGIDLPRDKRIAIALTYIFGIGRPTADKILAETGINPDTRTRDLTDEEVARLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DKNVEVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|310829559|ref|YP_003961916.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612] gi|308741293|gb|ADO38953.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I +L I P+ RV L E+EV +R + Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIYGIGRPTSNKILKELNINPDTRVKDLTENEVNALRNIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR V +NIKRL+++G YRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 DEKYTVEGDLRREVNLNIKRLIEIGSYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|302669988|ref|YP_003829948.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316] gi|302394461|gb|ADL33366.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316] Length = 157 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + P+ RV L + EV +I + I Sbjct: 36 MARIAGVDLPRDKRVEIGLTYIYGIGRTSSNKILEAAKVNPDTRVRDLTDDEVKKIAEII 95 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY VEGDLRR VAMNIKRL ++GC+RG+RHRRGLP RGQRT TNARTRK Sbjct: 96 GNDYDVEGDLRREVAMNIKRLTEIGCFRGMRHRRGLPCRGQRTKTNARTRK 146 >gi|290968218|ref|ZP_06559761.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L] gi|290781700|gb|EFD94285.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG SSQ+I K I P+ RV L E EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIFGIGLSSSQEILKKTGINPDTRVRDLTEDEVQKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLRR AMN+KRL+++ YRG RHR GLPVRGQR+ TNARTRK Sbjct: 61 GSEYKVEGDLRREGAMNVKRLIEINSYRGKRHRAGLPVRGQRSKTNARTRK 111 >gi|183221325|ref|YP_001839321.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911416|ref|YP_001962971.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226712754|sp|B0SA23|RS13_LEPBA RecName: Full=30S ribosomal protein S13 gi|226712755|sp|B0SSF5|RS13_LEPBP RecName: Full=30S ribosomal protein S13 gi|167776092|gb|ABZ94393.1| 30S Ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779747|gb|ABZ98045.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 125 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+V L YI GIG SSQ+I K I RV L + IR+ I Sbjct: 1 MARIAGVDLPSNKRIVIGLTYIFGIGKTSSQNILKKAGIDESIRVKDLSDEHEAAIRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ YQVEGDLR V +NIKRLMD+GCYRG RHRRGLPV GQRT TNARTRK Sbjct: 61 EESYQVEGDLRSEVNLNIKRLMDVGCYRGFRHRRGLPVNGQRTRTNARTRK 111 >gi|302876508|ref|YP_003845141.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] gi|307687180|ref|ZP_07629626.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] gi|302579365|gb|ADL53377.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KRV AL YI+GIG +SQ I ++ + P+ RV L E EV +R I Sbjct: 1 MARIAGIDIPKEKRVEIALTYIYGIGLPTSQRILSETGVNPDTRVKNLTEDEVNLLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR +A+NIKRL+++GCYRG+RHRR LPVRGQ+T TNARTRK Sbjct: 61 NKTVKVEGDLRREIALNIKRLVEIGCYRGIRHRRNLPVRGQKTKTNARTRK 111 >gi|221632954|ref|YP_002522177.1| 30S ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159] gi|254811173|sp|B9KZW3|RS13_THERP RecName: Full=30S ribosomal protein S13 gi|221156457|gb|ACM05584.1| ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159] Length = 128 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL I+GIG+ +++ I + I P +V L + EV ++R I Sbjct: 1 MARIAGVDLPRDKRIEYALTLIYGIGWTTARKILERTGIDPWTKVRDLTDDEVQRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++ VEGDLRR VAMNIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK Sbjct: 61 EKEMVVEGDLRRQVAMNIKRLIDIGCYRGLRHRMGLPVRGQRTRTNARTRK 111 >gi|225016260|ref|ZP_03705452.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum DSM 5476] gi|224950935|gb|EEG32144.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum DSM 5476] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG K+++DI + P+ RV L E E ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVALTYIFGIGQKTAKDIIAATGVNPDTRVRDLTEDEASKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR VA+NIKRL+++ CYRG RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DKNLMVEGDLRRDVALNIKRLIEINCYRGTRHRKGLPVRGQKTKTNARTRK 111 >gi|296272959|ref|YP_003655590.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299] gi|296097133|gb|ADG93083.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299] Length = 120 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI GIG +S+ I + I ++R H+L E E IR I Sbjct: 1 MARIAGVDLPNKKRMEYALTYIFGIGLYNSRLILDATGISYDKRAHELTEDEAAAIRLEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++YQVEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK Sbjct: 61 QKNYQVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 111 >gi|94987421|ref|YP_595354.1| 30S ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00] gi|158706242|sp|Q1MPP4|RS13_LAWIP RecName: Full=30S ribosomal protein S13 gi|94731670|emb|CAJ55033.1| ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/122 (54%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR AL YI+G+G ++ + + + I R + L E+ ++R+ + Sbjct: 1 MARIAGIDLPRGKRSDIALSYIYGVGRVTALKVLDAVGINWSRSIDDLSAEELNEVRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEG+LRR V+ NIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK KG V + Sbjct: 61 EKNYKVEGELRREVSANIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|261854971|ref|YP_003262254.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2] gi|261835440|gb|ACX95207.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2] Length = 118 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/111 (64%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K VV AL I+GIG +Q IC + P R+V L ESEV +R + Sbjct: 1 MARIAGINIPVQKHVVIALTSIYGIGTTRAQAICQASGVEPSRKVRDLSESEVEALRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-FIVEGDLRRDVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|295694863|ref|YP_003588101.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912] gi|295410465|gb|ADG04957.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912] Length = 122 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S I + + P+ RV L + EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRPMSNRILRETGVNPDTRVRDLTDEEVARLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR VAMNIKRL ++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DRNLKVEGDLRRDVAMNIKRLTEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|258543841|ref|ZP_05704075.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826] gi|258520930|gb|EEV89789.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826] Length = 118 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG ++DIC + P +++ L ++EV +R A+ Sbjct: 1 MARIAGINVPTQKHTVIALTSIYGIGPTRARDICVAAKVEPSKKIRDLSDAEVDALRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + YQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AE-YQVEGDLRRQVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|195952668|ref|YP_002120958.1| 30S ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1] gi|226712748|sp|B4U769|RS13_HYDS0 RecName: Full=30S ribosomal protein S13 gi|195932280|gb|ACG56980.1| ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1] Length = 126 Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG+ ++++C + IP +++ +L E+ Q+R+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYIYGIGWSKAREVCEQTGIPSIKKLGELTPEELNQLRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+ +VEGDLRR V +NIKRL+D+G YRGLRH RGLPVRGQ+T TNARTRK KG VA Sbjct: 61 EQNIKVEGDLRREVQLNIKRLVDIGTYRGLRHVRGLPVRGQQTKTNARTRKGRRKGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|189424434|ref|YP_001951611.1| ribosomal protein S13 [Geobacter lovleyi SZ] gi|226712742|sp|B3E854|RS13_GEOLS RecName: Full=30S ribosomal protein S13 gi|189420693|gb|ACD95091.1| ribosomal protein S13 [Geobacter lovleyi SZ] Length = 122 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 88/111 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG ++++I +I R +L E+E+ ++R+ I Sbjct: 1 MARIAGIDLPKNKRIEIALTYIYGIGRTTAKNILVATSIDGSTRTDKLTEAEIGKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 61 DKNVKVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111 >gi|254455733|ref|ZP_05069162.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211] gi|207082735|gb|EDZ60161.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211] Length = 127 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP+ K V L YI+GIG K S IC+ L IP +R+++L + E+++IR+ I Sbjct: 1 MARIAGINIPQNKLVHIGLTYIYGIGDKFSNQICSSLEIPRAKRINELTDDEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+++VEGDLRR +++IKRL+DL CYRG RHR+ LPVRGQRT NARTRK Sbjct: 61 DQNFKVEGDLRRDYSLSIKRLIDLACYRGTRHRKKLPVRGQRTRCNARTRK 111 >gi|223038487|ref|ZP_03608781.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267] gi|255321749|ref|ZP_05362904.1| 30S ribosomal protein S13 [Campylobacter showae RM3277] gi|222880344|gb|EEF15431.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267] gi|255301229|gb|EET80491.1| 30S ribosomal protein S13 [Campylobacter showae RM3277] Length = 122 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG S+ I + I ++RV+ L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLHKSRQILDATKISYDKRVNDLTEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++++ VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QENHVVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|167755936|ref|ZP_02428063.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402] gi|237733253|ref|ZP_04563734.1| 30S ribosomal protein S13 [Mollicutes bacterium D7] gi|167703928|gb|EDS18507.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402] gi|229383634|gb|EEO33725.1| 30S ribosomal protein S13 [Coprobacillus sp. D7] Length = 121 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q+I K+ I RV L E E+ IR+ I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILKKVGINENTRVKDLTEDEIGTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110 >gi|83591250|ref|YP_431259.1| 30S ribosomal protein S13 [Moorella thermoacetica ATCC 39073] gi|123523769|sp|Q2RFS3|RS13_MOOTA RecName: Full=30S ribosomal protein S13 gi|83574164|gb|ABC20716.1| SSU ribosomal protein S13P [Moorella thermoacetica ATCC 39073] Length = 123 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S I + P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEVALTYIYGIGRPKSNMILAATGVNPDTRVRDLTEDEVNRLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DKNVVVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|255283708|ref|ZP_05348263.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469] gi|255265773|gb|EET58978.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469] Length = 122 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +IR + Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRTSSNKILEAAGVNPDTRVRDLTDEEVSKIRDVM 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DEHYTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|269925856|ref|YP_003322479.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798] gi|269789516|gb|ACZ41657.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798] Length = 124 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/121 (60%), Positives = 87/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG SS+ I K + P+ RV L E EV +IR I Sbjct: 1 MARIAGVDLPRDKRVEVALTYIYGIGPTSSKKILEKTGVNPDTRVKDLTEDEVARIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR VA NI+RL+++GCYRG+RHRR LPV GQRT TNAR R+ K AR Sbjct: 61 EHEYVVEGDLRREVAQNIRRLIEIGCYRGIRHRRNLPVHGQRTRTNARQRRGPRKTVGAR 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|319938483|ref|ZP_08012877.1| 30S ribosomal protein [Coprobacillus sp. 29_1] gi|319806399|gb|EFW03066.1| 30S ribosomal protein [Coprobacillus sp. 29_1] Length = 121 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ IC I + RV L E E +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGATTAKKICEATGISEDTRVKDLTEEEEGKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ ++VEGDLRR A+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 EK-FKVEGDLRRDTALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110 >gi|241889158|ref|ZP_04776462.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379] gi|241864407|gb|EER68785.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379] Length = 121 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L E ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTEDQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110 >gi|291533604|emb|CBL06717.1| SSU ribosomal protein S13P [Megamonas hypermegale ART12/1] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG K+SQDI I P+ R L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGLKTSQDILAATGINPDTRARDLTEDEVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++++ VEGDLRR +++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK Sbjct: 61 DKNHLVEGDLRREISLNIKRLVEIGCYRGRRHRLGLPVRGQNTKNNARTRK 111 >gi|331091642|ref|ZP_08340476.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403399|gb|EGG82958.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ +I K + P+ R L + EV I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRVSANNILEKAGVNPDTRCRDLTDEEVKVISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++YQVEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 DENYQVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|302390982|ref|YP_003826802.1| 30S ribosomal protein S13P [Acetohalobium arabaticum DSM 5501] gi|302203059|gb|ADL11737.1| SSU ribosomal protein S13P [Acetohalobium arabaticum DSM 5501] Length = 123 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++QDI + + P+ RV L E EV ++R+ I Sbjct: 1 MARIEGVDLPRDKRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTRVRDLTEEEVAKLRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEG+LRR + +IKRL D+GCYRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 DEEYTVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQRTRTNARTRK 111 >gi|218779739|ref|YP_002431057.1| 30S ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01] gi|226712729|sp|B8FER2|RS13_DESAA RecName: Full=30S ribosomal protein S13 gi|218761123|gb|ACL03589.1| ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01] Length = 127 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI GIG +S I +L I P+ + L E +V IR+ I Sbjct: 1 MARIAGVDLPKRKRIEIGLTYIFGIGRSTSSKILEELGIDPDTKTDDLTEGQVNDIRKLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEG+LR ++MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK Sbjct: 61 DSKYRVEGELRTQISMNIKRLMDLGCYRGLRHRRGLPVHGQRTSTNARTRK 111 >gi|268609567|ref|ZP_06143294.1| 30S ribosomal protein S13 [Ruminococcus flavefaciens FD-1] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +++ +I + P+ RV L E +V ++R I Sbjct: 1 MARIAGVDLPKNKRIEIGLTYIYGIGRQTATNILANTGVNPDTRVKDLAEEDVAKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DANYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111 >gi|304310037|ref|YP_003809635.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1] gi|301795770|emb|CBL43969.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1] Length = 118 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC+ + I PE ++ L E+++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAQSICSAVGIDPEVKIKDLAEAKLDEVRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y EGDLRR ++M+IKRL DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YTTEGDLRREISMSIKRLTDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|121534657|ref|ZP_01666478.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1] gi|121306677|gb|EAX47598.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I I P+ RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTLSREILAATKINPDTRVRDLTEEEISKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR +NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK Sbjct: 61 DKNYKVEGDLRREEQLNIKRLIEIGCYRGKRHRAGLPVRGQRTKTNARTRK 111 >gi|220928233|ref|YP_002505142.1| 30S ribosomal protein S13 [Clostridium cellulolyticum H10] gi|254811141|sp|B8I805|RS13_CLOCE RecName: Full=30S ribosomal protein S13 gi|219998561|gb|ACL75162.1| ribosomal protein S13 [Clostridium cellulolyticum H10] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K + P+ RV L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIYGIGRPKANEILVKTGVNPDTRVRDLTDDEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR +A+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREIALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111 >gi|114319641|ref|YP_741324.1| 30S ribosomal protein S13 [Alkalilimnicola ehrlichii MLHE-1] gi|122312437|sp|Q0ABF3|RS13_ALHEH RecName: Full=30S ribosomal protein S13 gi|114226035|gb|ABI55834.1| SSU ribosomal protein S13P [Alkalilimnicola ehrlichii MLHE-1] Length = 119 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G ++ IC++ +P +R+V +L E E+ IR A+ Sbjct: 1 MARIAGVNIPVHKHAWVALTSIYGVGRTRAKAICDEAGVPRDRKVKELTEQELEAIRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR VAM+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-YEVEGDLRRAVAMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRK 110 >gi|157737263|ref|YP_001489946.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018] gi|315636980|ref|ZP_07892204.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22] gi|166991598|sp|A8ETK3|RS13_ARCB4 RecName: Full=30S ribosomal protein S13 gi|157699117|gb|ABV67277.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018] gi|315478810|gb|EFU69519.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22] Length = 122 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +S+ I N + I +R +L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRMEYALTYIYGIGLHNSRLILNAVGIDFNKRAFELTEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK Sbjct: 61 QENYMVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 111 >gi|182418811|ref|ZP_02950076.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521] gi|237666810|ref|ZP_04526795.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377308|gb|EDT74869.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521] gi|237658009|gb|EEP55564.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 122 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+G+G +SQ I I P+ R+ L E EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGVGLSTSQKILATTGINPDTRIKDLSEEEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNLIVEGDLRRDVALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|291544482|emb|CBL17591.1| SSU ribosomal protein S13P [Ruminococcus sp. 18P13] Length = 122 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG ++ I + + P+ RV L ES+V +R I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIYGIGRNTAATILKETGVNPDTRVKDLTESDVALLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DKHYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111 >gi|220935470|ref|YP_002514369.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7] gi|254811174|sp|B8GV36|RS13_THISH RecName: Full=30S ribosomal protein S13 gi|219996780|gb|ACL73382.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7] Length = 118 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP K V AL I+GIG +Q IC + P+ ++ L E EV ++R A+ Sbjct: 1 MARVAGVNIPDNKHTVIALTAIYGIGRTRAQKICEATGVKPDMKIRDLTEEEVEKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GQ-FPVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|169350819|ref|ZP_02867757.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552] gi|169292405|gb|EDS74538.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552] Length = 121 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 87/111 (78%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q+I K+ I RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILAKVGINENTRVKDLTEDEIGKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110 >gi|307694126|ref|ZP_07636363.1| 30S ribosomal protein S13 [Ruminococcaceae bacterium D16] Length = 122 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG S+ I K I P+ RV L E + ++R+ I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRTSANKILAKAGINPDTRVKDLTEDDEAKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR VAM+IKRL ++GCYRG+RHR+GLPVRGQR+ TNARTRK Sbjct: 61 SHEYTVEGDLRRNVAMDIKRLTEIGCYRGIRHRKGLPVRGQRSKTNARTRK 111 >gi|297569398|ref|YP_003690742.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2] gi|296925313|gb|ADH86123.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2] Length = 122 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ K + AL YI+GIG S++ I + +P +R +L ++EV ++R+ I Sbjct: 1 MARIAGVDIPKNKHMEVALTYIYGIGRPSARRILDLAKLPYDRNSDELTDNEVAEVRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY VEGD RR V M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK + V Sbjct: 61 EEDYVVEGDRRREVGMDIKRLMDLGCYRGLRHRKGLPCRGQRTSTNARTRKGPRRAAVKT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|167771242|ref|ZP_02443295.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM 17241] gi|167666493|gb|EDS10623.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM 17241] Length = 122 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI GIG K++Q I + P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPKDKRVEIGLTYIFGIGRKTAQQILEATGVNPDTRVKDLTEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DHNVHVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111 >gi|94266331|ref|ZP_01290033.1| Ribosomal protein S13 [delta proteobacterium MLMS-1] gi|93453085|gb|EAT03564.1| Ribosomal protein S13 [delta proteobacterium MLMS-1] Length = 122 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/122 (56%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP+ K + AL YIHGIG S++ I + +P R +L + E+ +IR+ + Sbjct: 1 MARLAGVDIPKNKHMEVALTYIHGIGRSSARRILDLAGLPYNRNSDELADGEIAEIRKIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGD RR V M+IKRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK + V Sbjct: 61 EEQFVVEGDRRREVGMDIKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAAVKS 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|320352936|ref|YP_004194275.1| 30S ribosomal protein S13P [Desulfobulbus propionicus DSM 2032] gi|320121438|gb|ADW16984.1| SSU ribosomal protein S13P [Desulfobulbus propionicus DSM 2032] Length = 122 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 71/122 (58%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + RAL YI+GIG S++ I +K +P + L +V +IR I Sbjct: 1 MARIAGVDLPRNKHMDRALTYIYGIGLTSARQILDKADLPYQMNSDDLSADDVNRIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y VEGD RR V+M+IKRLMDLGCYRG RHRR LPVRGQRT TNARTRK +G R Sbjct: 61 ENSYVVEGDRRREVSMDIKRLMDLGCYRGRRHRRSLPVRGQRTKTNARTRKGPRRGAAVR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257459217|ref|ZP_05624336.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268] gi|257443602|gb|EEV18726.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268] Length = 122 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I + I ++RV L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDAAGISYDKRVADLSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QEHYMVEGDLRKQVAMDIKALMDLGGYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|312144223|ref|YP_003995669.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus'] gi|311904874|gb|ADQ15315.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus'] Length = 128 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG +SQ+I +I P+ RV L E+E+ +R+ I Sbjct: 1 MARIEGVDLPRNKRVEIGLTYIYGIGKTTSQNILENTSIDPDTRVKDLTEAEISSLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEG+LRR +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|291296966|ref|YP_003508364.1| 30S ribosomal protein S13 [Meiothermus ruber DSM 1279] gi|290471925|gb|ADD29344.1| ribosomal protein S13 [Meiothermus ruber DSM 1279] Length = 126 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IPR KRV AL YI+G+G +++ + P RV L E+EV ++R+ + Sbjct: 1 MARISGVEIPRNKRVDVALTYIYGVGPARAKEALAATNVDPATRVKDLTEAEVARLREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTYKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|150015069|ref|YP_001307323.1| 30S ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052] gi|189040496|sp|A6LPT7|RS13_CLOB8 RecName: Full=30S ribosomal protein S13 gi|149901534|gb|ABR32367.1| ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052] Length = 122 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KRV L YI+GIG +SQ I I P+ RV L E EV +IR I Sbjct: 1 MARISGIDLPREKRVEIGLTYIYGIGLSTSQKILAVTGINPDTRVKDLSEEEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|116327248|ref|YP_796968.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327288|ref|YP_797008.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332098|ref|YP_801816.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280172|sp|Q04PW2|RS13_LEPBJ RecName: Full=30S ribosomal protein S13 gi|122284905|sp|Q055C0|RS13_LEPBL RecName: Full=30S ribosomal protein S13 gi|116119992|gb|ABJ78035.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120032|gb|ABJ78075.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125787|gb|ABJ77058.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 125 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+A+ Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSRVILKKAGIDESIRVKDLNESQEAAIRKAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK GK VA Sbjct: 61 EESAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKG-GKKTVAN 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|86606121|ref|YP_474884.1| 30S ribosomal protein S13 [Synechococcus sp. JA-3-3Ab] gi|123506458|sp|Q2JUJ3|RS13_SYNJA RecName: Full=30S ribosomal protein S13 gi|86554663|gb|ABC99621.1| ribosomal protein S13 [Synechococcus sp. JA-3-3Ab] Length = 127 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG S+ I K I P+ R L ++EV +R + Sbjct: 1 MARIAGVDIPRDKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +YQVEGDLRR AMNIKRL+D+G YRG RHR LPVRGQRT TNARTRK Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLNLPVRGQRTRTNARTRK 111 >gi|323141379|ref|ZP_08076270.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067] gi|322414128|gb|EFY04956.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067] Length = 122 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI+GIG S++I K I P+ RV L E EV +IR+ + Sbjct: 1 MARISGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEEEVAKIRETL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +QDY+VEGDLRR ++NIKRL+++G YRG RHR GLPVRGQ T NARTRK Sbjct: 61 DQDYKVEGDLRREESLNIKRLIEIGSYRGRRHRMGLPVRGQNTKNNARTRK 111 >gi|302336356|ref|YP_003801563.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084] gi|301320196|gb|ADK68683.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084] Length = 123 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG S+ +C + + P+ RV L E EV +IR I Sbjct: 1 MARINGVDLPREKRVEVGLTYLYGIGQTSATKVCAETGVNPDTRVKDLTEDEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++ EGDLRR V N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK Sbjct: 61 DANFTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111 >gi|329770016|ref|ZP_08261411.1| 30S ribosomal protein S13 [Gemella sanguinis M325] gi|328837327|gb|EGF86957.1| 30S ribosomal protein S13 [Gemella sanguinis M325] Length = 121 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 87/111 (78%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L ++ +IR+A+ Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110 >gi|118443662|ref|YP_877224.1| 30S ribosomal protein S13 [Clostridium novyi NT] gi|158706223|sp|A0PXX2|RS13_CLONN RecName: Full=30S ribosomal protein S13 gi|118134118|gb|ABK61162.1| ribosomal protein S13p/S18e [Clostridium novyi NT] Length = 123 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S++I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|261409495|ref|YP_003245736.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10] gi|315649673|ref|ZP_07902757.1| 30S ribosomal protein S13 [Paenibacillus vortex V453] gi|261285958|gb|ACX67929.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10] gi|315274861|gb|EFU38237.1| 30S ribosomal protein S13 [Paenibacillus vortex V453] Length = 122 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ + + I + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKVLKETGINADTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DGMVKVEGDLRREISLNIKRLTEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111 >gi|237753000|ref|ZP_04583480.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430] gi|229375267|gb|EEO25358.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430] Length = 122 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+G+G K+S+DI N + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGVGLKTSRDILNAVKISYDKRVQDLSEDEVSSIAKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|297567259|ref|YP_003686231.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946] gi|296851708|gb|ADH64723.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946] Length = 126 Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI G+G+ +++ + P RV L E+EV ++R+ I Sbjct: 1 MARIAGVEIPRNKRVDVALTYIFGVGWSRAKEALAATNVDPATRVKDLSEAEVARLREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y++EG+LR +A NIKRLMD+GCYRGLRHRRGLPVRGQRT TNAR+RK Sbjct: 61 ENTYKLEGELRAEIAGNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARSRK 111 >gi|78357277|ref|YP_388726.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|91207701|sp|Q30Z65|RS13_DESDG RecName: Full=30S ribosomal protein S13 gi|78219682|gb|ABB39031.1| SSU ribosomal protein S13P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 122 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+G+G ++ +I + + R + L EV +IR+ I Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGVGRATALEILDTTGVDWTRNIDDLSADEVNEIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+++VEGDLRR ++ NIKRLMD+GC+RGLRHRRGLP RGQRT TNARTRK Sbjct: 61 EQNHKVEGDLRREISSNIKRLMDIGCHRGLRHRRGLPARGQRTKTNARTRK 111 >gi|210611151|ref|ZP_03288765.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787] gi|210152138|gb|EEA83145.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787] Length = 178 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ R L + EV QI I Sbjct: 57 MARIAGVDLPRDKRVEIGLTYIYGIGRVSATKILEAAGVNPDTRCRDLTDEEVKQISAVI 116 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ YQVEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 117 DESYQVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 167 >gi|295111401|emb|CBL28151.1| SSU ribosomal protein S13P [Synergistetes bacterium SGP1] Length = 125 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI GIG S++ I + P+ RV L E + ++R+ I Sbjct: 1 MARISGVDLPREKRIEIALTYIFGIGVPSARKILAATGVNPDVRVKDLSEDDAQKLRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y VEGDLRR V+M+IKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK Sbjct: 61 EEHYVVEGDLRREVSMSIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRK 111 >gi|168187788|ref|ZP_02622423.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund] gi|169294364|gb|EDS76497.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund] Length = 123 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S++I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 GKSFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|220930990|ref|YP_002507898.1| ribosomal protein S13 [Halothermothrix orenii H 168] gi|254811150|sp|B8D0T4|RS13_HALOH RecName: Full=30S ribosomal protein S13 gi|219992300|gb|ACL68903.1| ribosomal protein S13 [Halothermothrix orenii H 168] Length = 122 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRNKRVEIGLTYIYGIGRSTSNKILKVTGIDPDTRVKDLTEAEIAKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ YQVEGDLRR + NIKRLMD+GCYRG+RHR+ LPVRGQRT TNARTRK Sbjct: 61 DK-YQVEGDLRREIRANIKRLMDIGCYRGIRHRKNLPVRGQRTRTNARTRK 110 >gi|121997627|ref|YP_001002414.1| 30S ribosomal protein S13 [Halorhodospira halophila SL1] gi|158706237|sp|A1WVA0|RS13_HALHL RecName: Full=30S ribosomal protein S13 gi|121589032|gb|ABM61612.1| SSU ribosomal protein S13P [Halorhodospira halophila SL1] Length = 119 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K AL I+GIG + ICN +P +RRV L ++EV +RQ + Sbjct: 1 MARIAGINIPTHKHAWVALTSIYGIGRTRALSICNAAGVPHDRRVRDLNDAEVEALRQEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y +EGDLRR+VAM+IKRLMDLGCYRG+RHRRGLPVRGQ+T TNARTRK +G +R Sbjct: 61 -GNYVIEGDLRRSVAMDIKRLMDLGCYRGMRHRRGLPVRGQQTQTNARTRKGPRRGPASR 119 >gi|124514419|gb|EAY55932.1| ribosomal protein S13 [Leptospirillum rubarum] Length = 124 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 68/110 (61%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KRV AL YI+GIG +S I I P RRV L + EV +R+ I Sbjct: 1 MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEVASLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+ Y VEGDLRR V NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR Sbjct: 61 EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110 >gi|217967393|ref|YP_002352899.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724] gi|226712734|sp|B8E1F7|RS13_DICTD RecName: Full=30S ribosomal protein S13 gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724] Length = 124 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V AL YI+GIG +S+ I + P +RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPSNKKVEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT NARTRK Sbjct: 61 ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRK 111 >gi|225850760|ref|YP_002730994.1| 30S ribosomal protein S13 [Persephonella marina EX-H1] gi|225644837|gb|ACO03023.1| 30S ribosomal protein S13 [Persephonella marina EX-H1] Length = 116 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y+VEGDLRR VA+NIKRLMD+GCYRG+RHR GLPVRGQRT TNA+TR+ Sbjct: 61 EQNYKVEGDLRREVAVNIKRLMDMGCYRGIRHRLGLPVRGQRTKTNAKTRR 111 >gi|254495734|ref|ZP_05108649.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12] gi|254355047|gb|EET13667.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12] Length = 118 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV AL I+GIG +S +C+ + I P +V QL ++++ R I Sbjct: 1 MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCSTVGIDPSTKVSQLTDAQLEAFRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK KG Sbjct: 61 AK-ITVEGDLRRVITMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKG 115 >gi|253682110|ref|ZP_04862907.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873] gi|331268439|ref|YP_004394931.1| 30S ribosomal protein S13 [Clostridium botulinum BKT015925] gi|253561822|gb|EES91274.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873] gi|329124989|gb|AEB74934.1| ribosomal protein S13 [Clostridium botulinum BKT015925] Length = 123 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S+ I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSRQILKETGVNPDTRVKDLSEEEVNTIRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|282857338|ref|ZP_06266575.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455] gi|282584838|gb|EFB90169.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455] Length = 126 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG ++++I K + P+ RV L E E +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSTAREILKKTGVNPDTRVKDLTEEEAQLLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLRR V+MNIKRLMD+GCYRG+RHR GLP RGQRT TNART K Sbjct: 61 VNNHKVEGDLRREVSMNIKRLMDIGCYRGIRHRLGLPCRGQRTKTNARTWK 111 >gi|257792537|ref|YP_003183143.1| 30S ribosomal protein S13 [Eggerthella lenta DSM 2243] gi|317490403|ref|ZP_07948887.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA] gi|325833513|ref|ZP_08165962.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1] gi|257476434|gb|ACV56754.1| ribosomal protein S13 [Eggerthella lenta DSM 2243] gi|316910538|gb|EFV32163.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA] gi|325485437|gb|EGC87906.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1] Length = 122 Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ L YI+GIG +S+ I + + P RV L E ++ ++R I Sbjct: 1 MARLVGVDLPRDKRIEVGLTYIYGIGLTTSKKILAETGVDPSVRVKDLTEDDLTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +VEGDL R V+ N+KRLM++GCYRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 QANIKVEGDLHREVSQNVKRLMEIGCYRGLRHRRGLPVRGQRTHTNARTRK 111 >gi|227499171|ref|ZP_03929306.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21] gi|226904618|gb|EEH90536.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21] Length = 121 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRDKRVEYALPYIYGIGLTLSREILEKTGINPDTRVRDLTEAEIAKLRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR ++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK Sbjct: 61 DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRK 111 >gi|291298739|ref|YP_003510017.1| 30S ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728] gi|290567959|gb|ADD40924.1| ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728] Length = 126 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S + C I P +RVH+L ++E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRSVETCAATGIDPSKRVHELTDAELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +YQVEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 EGNYQVEGDLRREVAADIRRKVEIGCYQGIRHRRGLPVHGQRTRTNARTRK 111 >gi|24213462|ref|NP_710943.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str. 56601] gi|45658679|ref|YP_002765.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|26454666|sp|Q9XD12|RS13_LEPIN RecName: Full=30S ribosomal protein S13 gi|73917913|sp|Q72NI5|RS13_LEPIC RecName: Full=30S ribosomal protein S13 gi|24194234|gb|AAN47961.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str. 56601] gi|45601923|gb|AAS71402.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 125 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 72/122 (59%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+ + Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK GK VA Sbjct: 61 EETAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKG-GKKTVAN 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|206602700|gb|EDZ39181.1| Ribosomal protein S13 [Leptospirillum sp. Group II '5-way CG'] Length = 124 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 67/110 (60%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KRV AL YI+GIG +S I I P RRV L + E+ +R+ I Sbjct: 1 MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEIASLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+ Y VEGDLRR V NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR Sbjct: 61 EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110 >gi|303240947|ref|ZP_07327458.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2] gi|302591533|gb|EFL61270.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2] Length = 123 Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S I K + P+ RV L + E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRTLSNQILEKTGVNPDTRVRDLTDDEISKLRECI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR V++NIKRLM++GCYRG RHR GLP RGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREVSLNIKRLMEVGCYRGRRHRMGLPCRGQRTKTNARTRK 111 >gi|226309833|ref|YP_002769727.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599] gi|254811132|sp|C0ZIK5|RS13_BREBN RecName: Full=30S ribosomal protein S13 gi|226092781|dbj|BAH41223.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599] Length = 122 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I + + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVALTYIFGIGRPTSQKILSATGVDMNTRVRDLTEDEVNKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRLM++GC+RG+RHRRGLPVRGQR+ TNARTRK Sbjct: 61 DKTVKVEGDLRREISLNIKRLMEIGCFRGIRHRRGLPVRGQRSKTNARTRK 111 >gi|255659526|ref|ZP_05404935.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544] gi|260848079|gb|EEX68086.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544] Length = 123 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG K+SQ++ I P+ R L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLKTSQELLKMTGINPDTRTRDLTEDEVVKLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNVVVEGDLRRERQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|187930341|ref|YP_001900828.1| 30S ribosomal protein S13 [Ralstonia pickettii 12J] gi|241664509|ref|YP_002982869.1| 30S ribosomal protein S13 [Ralstonia pickettii 12D] gi|309782857|ref|ZP_07677577.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA] gi|226712780|sp|B2UEJ6|RS13_RALPJ RecName: Full=30S ribosomal protein S13 gi|187727231|gb|ACD28396.1| ribosomal protein S13 [Ralstonia pickettii 12J] gi|240866536|gb|ACS64197.1| ribosomal protein S13 [Ralstonia pickettii 12D] gi|308918281|gb|EFP63958.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA] Length = 121 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC IP +++V L + + +R+ I Sbjct: 1 MARIAGVNIPNHKHTVIGLTAIYGIGRSRAQKICEATGIPTDKKVKDLTDPDQDALRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|224417908|ref|ZP_03655914.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|242309342|ref|ZP_04808497.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489] gi|253827247|ref|ZP_04870132.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|313141449|ref|ZP_07803642.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|239523913|gb|EEQ63779.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489] gi|253510653|gb|EES89312.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|313130480|gb|EFR48097.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] Length = 122 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG K+S+DI N + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKASRDILNAVNISYDKRVQDLGEDEVSAIAKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111 >gi|331004146|ref|ZP_08327626.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411556|gb|EGG90966.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str. F0167] Length = 122 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS+ I + + P+ RV L + EV ++ Q I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTSSKRILKEAGVNPDTRVKDLTDDEVKELAQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 SDSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRK 111 >gi|157964784|ref|YP_001499608.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5] gi|166991602|sp|A8F2C5|RS13_RICM5 RecName: Full=30S ribosomal protein S13 gi|157844560|gb|ABV85061.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5] Length = 125 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP +KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDSKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|206900392|ref|YP_002250725.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12] gi|226712733|sp|B5YDW7|RS13_DICT6 RecName: Full=30S ribosomal protein S13 gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12] Length = 124 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG +S+ I + P +RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPSNKKIEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT NARTRK Sbjct: 61 ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRK 111 >gi|291542056|emb|CBL15166.1| SSU ribosomal protein S13P [Ruminococcus bromii L2-63] Length = 122 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG K++ DI + P+ RV L E ++ ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRKTADDIIAATGVNPDTRVRDLTEEDIAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR +A +IKRL+D+GCYRG+RHR+GLPVRGQR+ TNARTRK Sbjct: 61 EHHCRVEGDLRRDIAYDIKRLIDIGCYRGVRHRKGLPVRGQRSKTNARTRK 111 >gi|319944773|ref|ZP_08019037.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599] gi|319742022|gb|EFV94445.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599] Length = 121 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG +Q IC + I P ++V L ++E+ +IR + Sbjct: 1 MARIAGVNVPDRQHTVIGLTAIYGIGRARAQAICAAVGIEPSKKVRDLSDAEMERIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K GVA Sbjct: 61 GR-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|256826597|ref|YP_003150556.1| 30S ribosomal protein S13P [Cryptobacterium curtum DSM 15641] gi|256582740|gb|ACU93874.1| SSU ribosomal protein S13P [Cryptobacterium curtum DSM 15641] Length = 122 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ L YI+GIG +SQ I + + P+ RV + E ++ +IR + Sbjct: 1 MARLVGVDLPRDKRIEVGLTYIYGIGLTTSQKILAETGVDPDTRVRDITEEDLTKIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDL R V+ N+KRLM++GCYRGLRHR+GLPV GQRTHTNARTRK Sbjct: 61 NENLSVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111 >gi|52840596|ref|YP_094395.1| 30S ribosomal protein S13 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293343|ref|YP_125758.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens] gi|54296387|ref|YP_122756.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris] gi|148361033|ref|YP_001252240.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby] gi|296105899|ref|YP_003617599.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99 Alcoy] gi|81369315|sp|Q5WZJ0|RS13_LEGPL RecName: Full=30S ribosomal protein S13 gi|81371222|sp|Q5X837|RS13_LEGPA RecName: Full=30S ribosomal protein S13 gi|81378213|sp|Q5ZYM1|RS13_LEGPH RecName: Full=30S ribosomal protein S13 gi|158706243|sp|A5IHP4|RS13_LEGPC RecName: Full=30S ribosomal protein S13 gi|52627707|gb|AAU26448.1| 30S ribosomal protein S13 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750172|emb|CAH11564.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris] gi|53753175|emb|CAH14622.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens] gi|148282806|gb|ABQ56894.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby] gi|295647800|gb|ADG23647.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99 Alcoy] gi|307609159|emb|CBW98615.1| 30S ribosomal protein S13 [Legionella pneumophila 130b] Length = 118 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/116 (62%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV AL I+GIG +S +C + I P +V QL ++++ +R I Sbjct: 1 MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCKTVDIDPSVKVSQLSDAQLESLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + VEGDLRR V MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK KG Sbjct: 61 AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKG 115 >gi|5163228|gb|AAD40607.1|AF115283_26 ribosomal protein S13 [Leptospira interrogans] Length = 125 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/122 (59%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+ + Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTR K GK VA Sbjct: 61 EETAKVEGDLRSEIRLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTR-KGGKKTVAN 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|237747387|ref|ZP_04577867.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS] gi|229378738|gb|EEO28829.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS] Length = 121 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + +V L I+GIG ++DIC + P ++V L +SE+ ++R+ I Sbjct: 1 MARIAGVNIPNHQHIVIGLTAIYGIGRPRAEDICAATGVAPTKKVKDLDDSELEKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|257784938|ref|YP_003180155.1| 30S ribosomal protein S13 [Atopobium parvulum DSM 20469] gi|257473445|gb|ACV51564.1| ribosomal protein S13 [Atopobium parvulum DSM 20469] Length = 122 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG + +CN+ I RV L E EV +IR I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGIGQTRATKVCNETGIDVNTRVKDLTEEEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR V N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK Sbjct: 61 DANYTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111 >gi|88607193|ref|YP_504913.1| 30S ribosomal protein S13 [Anaplasma phagocytophilum HZ] gi|123495600|sp|Q2GL38|RS13_ANAPZ RecName: Full=30S ribosomal protein S13 gi|88598256|gb|ABD43726.1| ribosomal protein S13 [Anaplasma phagocytophilum HZ] Length = 123 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/122 (59%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I RV L E +V++IR I Sbjct: 1 MARIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RAGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGSRLAVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15612281|ref|NP_223934.1| 30S ribosomal protein S13 [Helicobacter pylori J99] gi|7388139|sp|Q9ZJT2|RS13_HELPJ RecName: Full=30S ribosomal protein S13 gi|4155844|gb|AAD06818.1| 30S RIBOSOMAL PROTEIN S13 [Helicobacter pylori J99] Length = 120 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL +GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTCKNGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111 >gi|225026388|ref|ZP_03715580.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353] gi|224956277|gb|EEG37486.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353] Length = 122 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSADQILKAADVNPDTRVRDLTDDEVRRLSDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 NADYTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|255526604|ref|ZP_05393511.1| ribosomal protein S13 [Clostridium carboxidivorans P7] gi|296187293|ref|ZP_06855689.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7] gi|255509712|gb|EET86045.1| ribosomal protein S13 [Clostridium carboxidivorans P7] gi|296048164|gb|EFG87602.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7] Length = 123 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S I ++ + P+ RV L E EV +R + Sbjct: 1 MARIAGVDLPKEKRVEIGLTYIYGIGLPTSHKILSETGVNPDIRVKDLSEEEVNALRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNVKVEGDLRREIALNIKRLIEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|157164203|ref|YP_001467698.1| 30S ribosomal protein S13 [Campylobacter concisus 13826] gi|166231905|sp|A7ZFZ0|RS13_CAMC1 RecName: Full=30S ribosomal protein S13 gi|112800821|gb|EAT98165.1| ribosomal protein S13p/S18e [Campylobacter concisus 13826] Length = 122 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ L YI+GIG S+ I + I ++RV++L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVYELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QEHHVVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|71083783|ref|YP_266503.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062] gi|91763181|ref|ZP_01265145.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002] gi|91207713|sp|Q4FLN9|RS13_PELUB RecName: Full=30S ribosomal protein S13 gi|71062896|gb|AAZ21899.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062] gi|91717594|gb|EAS84245.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002] Length = 127 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP+ K V L YI+GIG K S IC L IP +R+++L + ++++IR+ I Sbjct: 1 MARIAGVNIPQNKLVHIGLTYIYGIGNKFSSQICTSLEIPKAKRINELTDEDILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++VEGDLRR ++ IKRL+DL CYRG RHR+ LPVRGQRT NARTRK Sbjct: 61 DANFKVEGDLRRDYSLTIKRLIDLACYRGSRHRKKLPVRGQRTRCNARTRK 111 >gi|303233092|ref|ZP_07319765.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4] gi|308233882|ref|ZP_07664619.1| SSU ribosomal protein S13P [Atopobium vaginae DSM 15829] gi|328943589|ref|ZP_08241054.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829] gi|302480677|gb|EFL43764.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4] gi|327491558|gb|EGF23332.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829] Length = 123 Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++G+G + +C + I P+ RV L E EV ++R I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGVGQTRATKVCAETGINPDTRVKDLTEDEVTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++ EGDLRR V N RLM++GCYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DANFTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|317126887|ref|YP_004093169.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522] gi|315471835|gb|ADU28438.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522] Length = 121 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 88/111 (79%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG S++ I ++ + E RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYVYGIGTSSAKAILSEAGVSEETRVRDLTEDELGKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DK-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|284049233|ref|YP_003399572.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731] gi|283953454|gb|ADB48257.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731] Length = 121 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/121 (55%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEAEIAKLREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR ++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK K A+ Sbjct: 61 DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKKVAGAK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|302036690|ref|YP_003797012.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii] gi|300604754|emb|CBK41086.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii] Length = 129 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L Y++GIG ++Q I K + RV + E ++++IR+ I Sbjct: 1 MARIAGVDLPKDKRIDIGLTYVYGIGRVAAQVILKKAGVDGSIRVKDVSEDKIVKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+DY+VEGDLR+ V+MNIKRL+D G +RGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 ERDYRVEGDLRKEVSMNIKRLVDTGTFRGLRHRKGLPVRGQRTKTNARTRK 111 >gi|309777156|ref|ZP_07672119.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53] gi|313897276|ref|ZP_07830820.1| 30S ribosomal protein S13 [Clostridium sp. HGF2] gi|308915026|gb|EFP60803.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53] gi|312957997|gb|EFR39621.1| 30S ribosomal protein S13 [Clostridium sp. HGF2] Length = 121 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG +S+ I K I + RV L E +V IR I Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRSTSEKILAKTGISEDIRVKDLTEDQVNAIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 D-GVKVEGDLRREVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|256371240|ref|YP_003109064.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331] gi|256007824|gb|ACU53391.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331] Length = 125 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ + + P+ RV L + EV+ +R I Sbjct: 1 MARIAGVDIPREKRVEVALTYIYGIGPTLARQVLEATGVNPDTRVRNLTDEEVLALRSWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+ +VEGDLRR V NIKR + +GCY+G+RHRRGLPVRGQRTHTNARTRK Sbjct: 61 DQNLKVEGDLRREVDQNIKRKIQIGCYQGIRHRRGLPVRGQRTHTNARTRK 111 >gi|210623212|ref|ZP_03293651.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275] gi|210153749|gb|EEA84755.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275] Length = 149 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I P+ R+ L E EV ++R+ I Sbjct: 27 MARIAGVDLPREKRAEIGLTYIYGIGKATSNEILAKAGINPDTRIKDLSEDEVNELRKII 86 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP RGQ+T TNARTRK Sbjct: 87 DEDFLVEGDLRREIALNIKRLRDIKCYRGIRHMKGLPCRGQKTKTNARTRK 137 >gi|315925230|ref|ZP_07921444.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621464|gb|EFV01431.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC 23263] Length = 122 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S++I +L I P R L E EV +R + Sbjct: 1 MARIAGVDLPRNKRVEVGLTYIYGIGRSTSKEILAELKIDPNTRCKDLTEDEVNSLRNIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR V +NIKRL+++G YRG RHRRGLPVRGQ+T TNARTRK Sbjct: 61 DEKYTVEGDLRREVNLNIKRLIEIGSYRGYRHRRGLPVRGQKTKTNARTRK 111 >gi|328951211|ref|YP_004368546.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884] gi|328451535|gb|AEB12436.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884] Length = 126 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG ++ I P RV L + EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVEIALTYIYGIGRTRAKQALEATGIDPSVRVKDLSDQEVVKLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTWKLEGELRAEVQANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111 >gi|329768297|ref|ZP_08259798.1| 30S ribosomal protein S13 [Gemella haemolysans M341] gi|328837496|gb|EGF87125.1| 30S ribosomal protein S13 [Gemella haemolysans M341] Length = 121 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110 >gi|304405591|ref|ZP_07387250.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9] gi|304345630|gb|EFM11465.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9] Length = 122 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +++ I + + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALQYIFGIGQTTAKKILATTGVDAQTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111 >gi|257456914|ref|ZP_05622095.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580] gi|257445623|gb|EEV20685.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580] Length = 125 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P K V AL YI+GI S++ IC K I P R ++ L + E+ IR I Sbjct: 1 MARISGVDLPN-KHVNIALTYIYGISHSSAKAICEKSKIDPMRMINDLNQDELAAIRAVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +QDY+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTRK Sbjct: 60 DQDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTRK 110 >gi|152988309|ref|YP_001346245.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7] gi|166231915|sp|A6UZL0|RS13_PSEA7 RecName: Full=30S ribosomal protein S13 gi|150963467|gb|ABR85492.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7] Length = 118 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q+IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-HTTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|154498910|ref|ZP_02037288.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC 29799] gi|150271750|gb|EDM98976.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC 29799] Length = 122 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ L YI+GIG S+ I + I P+ RV L E++ +R+ I Sbjct: 1 MARIAGIDLPKDKRIEIGLTYIYGIGRTSANKILAETGINPDTRVKDLTEADEAALRECI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR VAM+IKRL ++GCYRGLRHR+GLPVRGQR+ TNARTRK Sbjct: 61 AHNYTVEGDLRRDVAMDIKRLTEIGCYRGLRHRKGLPVRGQRSKTNARTRK 111 >gi|72163019|ref|YP_290676.1| 30S ribosomal protein S13 [Thermobifida fusca YX] gi|91207629|sp|Q47LL9|RS13_THEFY RecName: Full=30S ribosomal protein S13 gi|71916751|gb|AAZ56653.1| SSU ribosomal protein S13P [Thermobifida fusca YX] Length = 126 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 86/110 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG + + + P+ RV+QL E E++++R+ I Sbjct: 1 MARIAGVDLPRDKRVEVALTYVYGIGRSRAAETLANTGVNPDTRVYQLTEEELVKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 DANYKVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|328953133|ref|YP_004370467.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109] gi|328453457|gb|AEB09286.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109] Length = 124 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI+GIG ++Q I + + L ++E+ +IR I Sbjct: 1 MARISGVDLPRNKRMEIALTYIYGIGRTTAQKILQVAEVDGSTKSDNLTDAELTRIRNVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++VEGDLRR ++MNIKRLMD+GCYRGLRHR+ LPVRGQRTHTNARTRK Sbjct: 61 DAHHKVEGDLRREISMNIKRLMDIGCYRGLRHRKSLPVRGQRTHTNARTRK 111 >gi|256390170|ref|YP_003111734.1| 30S ribosomal protein S13 [Catenulispora acidiphila DSM 44928] gi|256356396|gb|ACU69893.1| ribosomal protein S13 [Catenulispora acidiphila DSM 44928] Length = 126 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KR+ AL YI+GIG SQ C + I P RV L E +++++RQ I Sbjct: 1 MARLSGVDIPREKRLEIALTYIYGIGRTRSQKTCAETGINPNTRVKDLTEDDLVKLRQWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR V +I+R +++GCY+G+RHR+GLPV GQRTHTNARTRK Sbjct: 61 DTNYRVEGDLRREVQADIRRKIEIGCYQGVRHRKGLPVHGQRTHTNARTRK 111 >gi|315652329|ref|ZP_07905321.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986] gi|315485452|gb|EFU75842.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986] Length = 122 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS+ I + + P+ RV L + EV ++ Q I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTSSRRILKEANVNPDTRVKDLTDDEVKELAQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 SDTQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRK 111 >gi|302337499|ref|YP_003802705.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293] gi|301634684|gb|ADK80111.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293] Length = 121 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 3/112 (2%) Query: 1 MARIAGVNIP-RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MARIAG+++P +A ++ +L YI+GIG S+ +IC K I P+ +++ L +V ++R Sbjct: 1 MARIAGIDLPNKATKI--SLTYIYGIGRSSAMEICKKAGIDPDSKMNDLSAEDVNKLRTL 58 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+ DY VEG LR +A+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 59 IDSDYTVEGRLRTQIALNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|270157889|ref|ZP_06186546.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968] gi|289163852|ref|YP_003453990.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150] gi|269989914|gb|EEZ96168.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968] gi|288857025|emb|CBJ10839.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150] Length = 118 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +V AL I+GIG +S +C+ + I P ++V +L ++++ +R I Sbjct: 1 MARIAGVNIPDHKHLVIALTAIYGIGKPTSIKLCSAVGIDPSKKVSELTDAQLESLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK KG Sbjct: 61 AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPVHGQRTKTNARTRKGRRKG 115 >gi|160914537|ref|ZP_02076752.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991] gi|158433695|gb|EDP11984.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991] Length = 121 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 87/111 (78%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG ++++I K+ I + RV L E +V IR+ + Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEEILAKVGISEDIRVKDLSEEQVNAIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DT-IKVEGDLRRDVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|23097598|ref|NP_691064.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831] gi|32363325|sp|Q8ETW0|RS13_OCEIH RecName: Full=30S ribosomal protein S13 gi|22775821|dbj|BAC12099.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831] Length = 121 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+G+G ++Q I + + + RV L E E+ +IRQA+ Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGVGKTTAQQILKEAGVSEDTRVRDLTEDELGRIRQAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y EGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T N+RTRK Sbjct: 61 DQ-YNTEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNSRTRK 110 >gi|239948297|ref|ZP_04700050.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922573|gb|EER22597.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes scapularis] Length = 125 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|292669834|ref|ZP_06603260.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541] gi|292648631|gb|EFF66603.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541] Length = 122 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG ++Q I + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEISLTYIYGIGLTTAQKILAIADVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222529705|ref|YP_002573587.1| 30S ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725] gi|302871523|ref|YP_003840159.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47] gi|312127251|ref|YP_003992125.1| 30S ribosomal protein s13 [Caldicellulosiruptor hydrothermalis 108] gi|312135471|ref|YP_004002809.1| 30S ribosomal protein s13 [Caldicellulosiruptor owensensis OL] gi|312622070|ref|YP_004023683.1| 30S ribosomal protein s13 [Caldicellulosiruptor kronotskyensis 2002] gi|254811124|sp|B9MKF6|RS13_ANATD RecName: Full=30S ribosomal protein S13 gi|222456552|gb|ACM60814.1| ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725] gi|302574382|gb|ADL42173.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47] gi|311775522|gb|ADQ05009.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL] gi|311777270|gb|ADQ06756.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108] gi|312202537|gb|ADQ45864.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis 2002] Length = 124 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|218284161|ref|ZP_03489955.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989] gi|218215354|gb|EEC88892.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989] Length = 121 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L YI+GIG +S+ + + I + RV L E ++ IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYIYGIGLTTSKKVLEETGISEDVRVKDLTEEQLNAIRKTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DA-IKVEGDLRREVQLNIKRLMEIGCYRGMRHRKGLPVRGQRTKTNARTRK 110 >gi|67458692|ref|YP_246316.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2] gi|75536846|sp|Q4UMQ7|RS13_RICFE RecName: Full=30S ribosomal protein S13 gi|67004225|gb|AAY61151.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2] Length = 125 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|157828838|ref|YP_001495080.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933565|ref|YP_001650354.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. Iowa] gi|166231921|sp|A8GT47|RS13_RICRS RecName: Full=30S ribosomal protein S13 gi|189044290|sp|B0BUN8|RS13_RICRO RecName: Full=30S ribosomal protein S13 gi|157801319|gb|ABV76572.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908652|gb|ABY72948.1| SSU ribosomal protein S13P [Rickettsia rickettsii str. Iowa] Length = 125 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KRVV +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|160881760|ref|YP_001560728.1| ribosomal protein S13 [Clostridium phytofermentans ISDg] gi|189040498|sp|A9KJG9|RS13_CLOPH RecName: Full=30S ribosomal protein S13 gi|160430426|gb|ABX43989.1| ribosomal protein S13 [Clostridium phytofermentans ISDg] Length = 122 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG SS I K + P+ RV L + EV +IR I Sbjct: 1 MARISGVDLPREKRIEIGLTYVYGIGRVSSNRILAKAGVNPDTRVRDLTDEEVAKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETMLVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|108804950|ref|YP_644887.1| 30S ribosomal protein S13 [Rubrobacter xylanophilus DSM 9941] gi|123177177|sp|Q1AU53|RS13_RUBXD RecName: Full=30S ribosomal protein S13 gi|108766193|gb|ABG05075.1| SSU ribosomal protein S13P [Rubrobacter xylanophilus DSM 9941] Length = 122 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +++ + + + P+ RV L E E+ +R+ I Sbjct: 1 MARIAGVDLPREKRIEVALTYIYGIGRSTARRVIRETGVDPDTRVRDLAEGEIAALRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDL+R V NI+RLMD+GCYRGLRHRRGLPVRGQRT TNAR RK Sbjct: 61 DENLKVEGDLKREVNQNIRRLMDIGCYRGLRHRRGLPVRGQRTKTNARQRK 111 >gi|226227382|ref|YP_002761488.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27] gi|259494679|sp|C1A4J3|RS13_GEMAT RecName: Full=30S ribosomal protein S13 gi|226090573|dbj|BAH39018.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27] Length = 125 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K+V L YI GIG K++Q I + +RV L ++++ ++RQ I Sbjct: 1 MARIAGVDLPREKKVEIGLTYIFGIGRKTAQKILEASGVSSAQRVRDLNDNDLNKLRQEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++++VEG LR VAMNIKRLMD+G YRG RHRRGLPVRGQRTHTNART+K Sbjct: 61 ERNHRVEGALRTEVAMNIKRLMDIGSYRGTRHRRGLPVRGQRTHTNARTKK 111 >gi|94676656|ref|YP_588798.1| 30S ribosomal protein S13 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|158706338|sp|Q1LTB6|RS13_BAUCH RecName: Full=30S ribosomal protein S13 gi|94219806|gb|ABF13965.1| ribosomal protein S13p [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 118 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG K SQ ICN IP ++ L E+++ +R I Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGIKRSQYICNATGIPQNTKLSTLSETQIDTLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + +EGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 TQ-FTIEGDLRREVTLNIKRLIDLGTYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|300309479|ref|YP_003773571.1| 30S ribosomal protein S13 [Herbaspirillum seropedicae SmR1] gi|300072264|gb|ADJ61663.1| 30S ribosomal subunit S13 protein [Herbaspirillum seropedicae SmR1] Length = 121 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I+GIG +QDIC +P ++V L ++E+ ++R I Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIYGIGRPRAQDICAATGVPTNKKVKDLDDNELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRRELSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|160947675|ref|ZP_02094842.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270] gi|158446809|gb|EDP23804.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270] Length = 122 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG K+S DI I P+ RV L E+EV IR I Sbjct: 1 MARIVGVDLPREKRVEIGLTYIYGIGRKTSNDILRNAGINPDTRVKDLTEAEVALIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR +AMNIKRL ++ CYRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YLVEGDLRREIAMNIKRLREINCYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|313895242|ref|ZP_07828799.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529820|ref|ZP_08030897.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399] gi|312976137|gb|EFR41595.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str. F0430] gi|320137838|gb|EFW29743.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399] Length = 122 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +S+ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTTSKKLLAIADVNPDARTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254517496|ref|ZP_05129552.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA] gi|226911245|gb|EEH96446.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA] Length = 121 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG +S I + + P+ RV L E EV +IR+ + Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLSTSHKILAETGVNPDTRVRDLTEEEVTKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 -KTLTIEGDLRREVALNIKRLVEIGCYRGIRHRKGLPVRGQKTKTNARTRK 110 >gi|312793914|ref|YP_004026837.1| 30S ribosomal protein s13 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877390|ref|ZP_07737355.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A] gi|311795864|gb|EFR12228.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A] gi|312181054|gb|ADQ41224.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 124 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVARIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|154173907|ref|YP_001409134.1| 30S ribosomal protein S13 [Campylobacter curvus 525.92] gi|166231906|sp|A7H0Z2|RS13_CAMC5 RecName: Full=30S ribosomal protein S13 gi|112802271|gb|EAT99615.1| ribosomal protein S13p/S18e [Campylobacter curvus 525.92] Length = 122 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ L YI+GIG S+ I + I ++RV +L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVFELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK Sbjct: 61 QEHHIVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111 >gi|126697666|ref|YP_001086563.1| 30S ribosomal protein S13 [Clostridium difficile 630] gi|254973757|ref|ZP_05270229.1| 30S ribosomal protein S13 [Clostridium difficile QCD-66c26] gi|255091147|ref|ZP_05320625.1| 30S ribosomal protein S13 [Clostridium difficile CIP 107932] gi|255099258|ref|ZP_05328235.1| 30S ribosomal protein S13 [Clostridium difficile QCD-63q42] gi|255305041|ref|ZP_05349213.1| 30S ribosomal protein S13 [Clostridium difficile ATCC 43255] gi|255312801|ref|ZP_05354384.1| 30S ribosomal protein S13 [Clostridium difficile QCD-76w55] gi|255515560|ref|ZP_05383236.1| 30S ribosomal protein S13 [Clostridium difficile QCD-97b34] gi|255648655|ref|ZP_05395557.1| 30S ribosomal protein S13 [Clostridium difficile QCD-37x79] gi|255654188|ref|ZP_05399597.1| 30S ribosomal protein S13 [Clostridium difficile QCD-23m63] gi|260681872|ref|YP_003213157.1| 30S ribosomal protein S13 [Clostridium difficile CD196] gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291] gi|296449773|ref|ZP_06891542.1| 30S ribosomal protein S13 [Clostridium difficile NAP08] gi|296877837|ref|ZP_06901859.1| 30S ribosomal protein S13 [Clostridium difficile NAP07] gi|306518778|ref|ZP_07405125.1| 30S ribosomal protein S13 [Clostridium difficile QCD-32g58] gi|123174671|sp|Q18CI0|RS13_CLOD6 RecName: Full=30S ribosomal protein S13 gi|115249103|emb|CAJ66914.1| 30S ribosomal protein S13 [Clostridium difficile] gi|260208035|emb|CBA60233.1| 30S ribosomal protein S13 [Clostridium difficile CD196] gi|260211486|emb|CBE01623.1| 30S ribosomal protein S13 [Clostridium difficile R20291] gi|296261371|gb|EFH08197.1| 30S ribosomal protein S13 [Clostridium difficile NAP08] gi|296431137|gb|EFH16962.1| 30S ribosomal protein S13 [Clostridium difficile NAP07] Length = 123 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG ++ +I K I P+ R+ L E +V ++R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQRT TNARTRK Sbjct: 61 DDDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTNARTRK 111 >gi|258646027|ref|ZP_05733496.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470] gi|260403399|gb|EEW96946.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470] Length = 125 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S++I NK I P+ RV L E +V IR A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIFGIGLTLSREILNKAGISPDVRVRDLTEDDVANIRNAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY+VEGDLRR ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK Sbjct: 61 -ADYKVEGDLRREESLNIKRLVEIGSYRGRRHRDGLPTRGQRTKTNARTRK 110 >gi|17547715|ref|NP_521117.1| 30S ribosomal protein S13 [Ralstonia solanacearum GMI1000] gi|32363369|sp|Q8XV35|RS13_RALSO RecName: Full=30S ribosomal protein S13 gi|17430020|emb|CAD16705.1| probable 30s ribosomal protein s13 [Ralstonia solanacearum GMI1000] gi|299065438|emb|CBJ36607.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CMR15] Length = 121 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG ++ IC IP +++V L + + +R+ I Sbjct: 1 MARIAGVNIPNHKHTVIGLTAIYGIGRSRARKICEATGIPTDKKVKDLTDPDQDALRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|169335654|ref|ZP_02862847.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM 17244] gi|169258392|gb|EDS72358.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM 17244] Length = 122 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S + + I P+ R+ L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRVEIGLTYIYGIGQATSNKLLAEAGINPDTRIKDLSEEEVNKLRSLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ++ TNARTRK Sbjct: 61 DEKVTVEGDLRREVSLNIKRLMEIGTYRGLRHRRGLPVRGQKSKTNARTRK 111 >gi|289449373|ref|YP_003475758.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289183920|gb|ADC90345.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 122 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P KR+ AL YI+GIG S +I K + P+ RV L + E+ +IR + Sbjct: 1 MARISGVDLPNEKRLEIALTYIYGIGRTLSGEIIAKCGLNPDTRVKDLSDDEIAKIRDVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR VA+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK Sbjct: 61 ENQYKVEGDLRREVALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111 >gi|146297260|ref|YP_001181031.1| 30S ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166231904|sp|A4XLQ5|RS13_CALS8 RecName: Full=30S ribosomal protein S13 gi|145410836|gb|ABP67840.1| SSU ribosomal protein S13P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 124 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRIEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|28212157|ref|NP_783101.1| 30S ribosomal protein S13 [Clostridium tetani E88] gi|32363299|sp|Q890Q7|RS13_CLOTE RecName: Full=30S ribosomal protein S13 gi|28204601|gb|AAO37038.1| SSU ribosomal protein S13P [Clostridium tetani E88] Length = 123 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG S++ I + + P+ R+ L E EV +R I Sbjct: 1 MARIAGIDLPREKRVEVGLTYIFGIGTSSAKKILKETGVNPDIRIKDLSEEEVNLLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q+ +VEGDLRR VA++IKRL ++G YRG+RHRRGLPVRGQ+T TNARTRK K V+R Sbjct: 61 NQNLKVEGDLRRDVALDIKRLKEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKLVVSR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|203284410|ref|YP_002222150.1| 30S ribosomal protein S13 [Borrelia duttonii Ly] gi|203287944|ref|YP_002222959.1| 30S ribosomal protein S13 [Borrelia recurrentis A1] gi|226712699|sp|B5RM58|RS13_BORDL RecName: Full=30S ribosomal protein S13 gi|226712702|sp|B5RPK4|RS13_BORRA RecName: Full=30S ribosomal protein S13 gi|201083853|gb|ACH93444.1| 30S ribosomal protein S13 [Borrelia duttonii Ly] gi|201085164|gb|ACH94738.1| 30S ribosomal protein S13 [Borrelia recurrentis A1] Length = 125 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K I PE+R L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRSRALEICKKTGILPEKRAKDLDNEEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111 >gi|212637979|ref|YP_002314499.1| 30S ribosomal protein S13 [Anoxybacillus flavithermus WK1] gi|226712689|sp|B7GJ92|RS13_ANOFW RecName: Full=30S ribosomal protein S13 gi|212559459|gb|ACJ32514.1| Ribosomal protein S13 [Anoxybacillus flavithermus WK1] Length = 121 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKATAQKILAEAGVSEDTRVRDLTEEELGKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|299143169|ref|ZP_07036249.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517654|gb|EFI41393.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 120 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG K SQ+I + + RV L ESE+ +IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRKRSQEILTNADVNFDTRVKDLTESELARIRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR +AMNIKRL ++ CYRG+RH++GLPVRGQ+T TNARTRK Sbjct: 61 DK-YHVEGDLRRDIAMNIKRLKEINCYRGMRHKKGLPVRGQKTKTNARTRK 110 >gi|160932175|ref|ZP_02079566.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753] gi|156868777|gb|EDO62149.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753] Length = 122 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG K++ +I + P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEIGLSYIYGIGRKTATEILKATGVNPDTRVRDLTEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +VEGDLRR VA +IKRL+++GCYRG+RHR+GLPVRGQR+ TNARTRK Sbjct: 61 DHNCRVEGDLRRDVAFDIKRLIEIGCYRGVRHRKGLPVRGQRSKTNARTRK 111 >gi|18311361|ref|NP_563295.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13] gi|110801380|ref|YP_697068.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124] gi|110802938|ref|YP_699637.1| 30S ribosomal protein S13 [Clostridium perfringens SM101] gi|168205208|ref|ZP_02631213.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987] gi|168211879|ref|ZP_02637504.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626] gi|168215202|ref|ZP_02640827.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969] gi|168216657|ref|ZP_02642282.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239] gi|169347160|ref|ZP_02866102.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495] gi|182626922|ref|ZP_02954655.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721] gi|32363368|sp|Q8XHU8|RS13_CLOPE RecName: Full=30S ribosomal protein S13 gi|123047165|sp|Q0SQH0|RS13_CLOPS RecName: Full=30S ribosomal protein S13 gi|123049590|sp|Q0TMS2|RS13_CLOP1 RecName: Full=30S ribosomal protein S13 gi|18146045|dbj|BAB82085.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13] gi|110676027|gb|ABG85014.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124] gi|110683439|gb|ABG86809.1| 30S ribosomal protein S13 [Clostridium perfringens SM101] gi|169296843|gb|EDS78972.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495] gi|170663261|gb|EDT15944.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987] gi|170710177|gb|EDT22359.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626] gi|170713398|gb|EDT25580.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969] gi|177907712|gb|EDT70327.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721] gi|182381222|gb|EDT78701.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239] Length = 121 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG +SQ I + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGLPTSQKILEVTGVNPDTRVKDLTEEEVNSIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D VEGDLRR VA+NIKRL+++G YRG+RHR+GLP+RGQ+T TNARTRK Sbjct: 61 -KDLTVEGDLRREVALNIKRLVEIGSYRGIRHRKGLPLRGQKTKTNARTRK 110 >gi|190571567|ref|YP_001975925.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018969|ref|ZP_03334776.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226712803|sp|B3CN47|RS13_WOLPP RecName: Full=30S ribosomal protein S13 gi|190357839|emb|CAQ55295.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995078|gb|EEB55719.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 122 Score = 134 bits (336), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL YIHGIG ++ IC I +RV +L + ++ +I I Sbjct: 1 MARIAGINVPVKKCVPFALTYIHGIGITTANIICRSCKIDERKRVLELQDEDIEKISSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q Y +EG+LR+ VAM+IK LM++GCYRGLRHR+GLPVRGQRTHTNA+TRK K +A Sbjct: 61 RQKYVIEGELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQRTHTNAKTRKGRSKLPIAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|206889222|ref|YP_002249223.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM 11347] gi|226712799|sp|B5YG25|RS13_THEYD RecName: Full=30S ribosomal protein S13 gi|206741160|gb|ACI20217.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM 11347] Length = 121 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ +RV L I GIG S I + + P +RV L + E+++IR I Sbjct: 1 MARIAGVDIPKNERVEIGLTRIFGIGRSLSNKILKETGVEPNKRVKDLTDDEIVKIRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEG+LR+ ++MNIKRLMD+GCYRGLRH LPVRGQRT TN+RTRK Sbjct: 61 EKNYKVEGELRKEISMNIKRLMDIGCYRGLRHMANLPVRGQRTRTNSRTRK 111 >gi|303230139|ref|ZP_07316908.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a] gi|303231267|ref|ZP_07318005.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6] gi|302514174|gb|EFL56178.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6] gi|302515200|gb|EFL57173.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a] Length = 122 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLADEILAKTGINPDTRVRDLSEDEVAKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK Sbjct: 61 DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111 >gi|332107890|gb|EGJ09114.1| 30S ribosomal protein S13 [Rubrivivax benzoatilyticus JA2] Length = 121 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++Q IC+ + IP ++V L +SE+ +IR+ I Sbjct: 1 MARIAGINIPPHKHAEIGLTSIYGIGRTTAQKICDSVGIPYSKKVKDLNDSELEKIREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK KG A Sbjct: 61 GR-LTIEGDLRRELSINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|34581391|ref|ZP_00142871.1| 30S ribosomal protein S13 [Rickettsia sibirica 246] gi|229586987|ref|YP_002845488.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5] gi|238650950|ref|YP_002916806.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic] gi|259494689|sp|C3PP85|RS13_RICAE RecName: Full=30S ribosomal protein S13 gi|259494690|sp|C4K2F7|RS13_RICPU RecName: Full=30S ribosomal protein S13 gi|28262776|gb|EAA26280.1| 30S ribosomal protein S13 [Rickettsia sibirica 246] gi|228022037|gb|ACP53745.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5] gi|238625048|gb|ACR47754.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic] Length = 125 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|152993916|ref|YP_001359637.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1] gi|158706288|sp|A6QCS1|RS13_SULNB RecName: Full=30S ribosomal protein S13 gi|151425777|dbj|BAF73280.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1] Length = 120 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +S+ I ++ I RVH+L +++ IR I Sbjct: 1 MARIAGVDLPQKKRIEYALTYIYGIGLTTSRKILDRTGIDYNTRVHELTDAQAATIRNDI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLR+ V ++IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK Sbjct: 61 QENVMVEGDLRKKVTLDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111 >gi|229542179|ref|ZP_04431239.1| ribosomal protein S13 [Bacillus coagulans 36D1] gi|229326599|gb|EEN92274.1| ribosomal protein S13 [Bacillus coagulans 36D1] Length = 121 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + I + RV L E EV +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAQKILAEAGISEDTRVRDLTEDEVNKIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|307244743|ref|ZP_07526844.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678] gi|306491841|gb|EFM63893.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678] Length = 122 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I P+ R+ +L E +V ++R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGINPDTRIKELSEDQVNELRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK Sbjct: 61 DEDHLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRK 111 >gi|323490647|ref|ZP_08095852.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2] gi|323395739|gb|EGA88580.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2] Length = 121 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI G+G ++Q + + I E RV L E E+ IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGVGKTTAQKVLSAAGISEETRVRDLTEDELNNIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q Y++EGDLRR V+MNIKRLM++ +RG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DQ-YKIEGDLRREVSMNIKRLMEIASFRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|167749413|ref|ZP_02421540.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702] gi|167657585|gb|EDS01715.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702] gi|291532115|emb|CBK97700.1| SSU ribosomal protein S13P [Eubacterium siraeum 70/3] gi|291558145|emb|CBL35262.1| SSU ribosomal protein S13P [Eubacterium siraeum V10Sc8a] Length = 123 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 65/112 (58%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L Y++GIG K++ DI K + P+ RV L + + +IR AI Sbjct: 1 MARIAGIDLPKEKRVEIGLTYVYGIGRKTANDILAKAGVNPDTRVKDLTDDDEAKIRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ VEGDLRR VA+NIKRL+++ C+RG RHR+GLPVRGQRT TNARTRK Sbjct: 61 EQLGVAVEGDLRREVALNIKRLVEINCFRGTRHRKGLPVRGQRTKTNARTRK 112 >gi|15604483|ref|NP_221001.1| 30S ribosomal protein S13 [Rickettsia prowazekii str. Madrid E] gi|6226062|sp|Q9ZCS7|RS13_RICPR RecName: Full=30S ribosomal protein S13 gi|3861177|emb|CAA15077.1| 30S RIBOSOMAL PROTEIN S13 (rpsM) [Rickettsia prowazekii] gi|292572265|gb|ADE30180.1| 30S ribosomal protein S13 [Rickettsia prowazekii Rp22] Length = 125 Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKKVKVLTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDL+R V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|225574730|ref|ZP_03783340.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM 10507] gi|225038059|gb|EEG48305.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM 10507] Length = 122 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L + EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRPSATRILADAKVNPDTRVRDLTDEEVNRIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|49074668|gb|AAT49419.1| PA4241 [synthetic construct] Length = 119 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|15599437|ref|NP_252931.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1] gi|107103757|ref|ZP_01367675.1| hypothetical protein PaerPA_01004828 [Pseudomonas aeruginosa PACS2] gi|116052276|ref|YP_788878.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889430|ref|YP_002438294.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58] gi|254237105|ref|ZP_04930428.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719] gi|296387202|ref|ZP_06876701.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAb1] gi|313111395|ref|ZP_07797200.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016] gi|32363411|sp|Q9HWF7|RS13_PSEAE RecName: Full=30S ribosomal protein S13 gi|122261425|sp|Q02T58|RS13_PSEAB RecName: Full=30S ribosomal protein S13 gi|226712778|sp|B7V665|RS13_PSEA8 RecName: Full=30S ribosomal protein S13 gi|9950458|gb|AAG07629.1|AE004841_7 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1] gi|115587497|gb|ABJ13512.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14] gi|126169036|gb|EAZ54547.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719] gi|218769653|emb|CAW25413.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58] gi|310883702|gb|EFQ42296.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016] gi|310941721|dbj|BAJ24214.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa] Length = 118 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|328884452|emb|CCA57691.1| SSU ribosomal protein S13p [Streptomyces venezuelae ATCC 10712] Length = 126 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRVV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVVVALTYVFGIGRTRSEEILAATGVNPSTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + Q EGDLRR +A +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DANLQTEGDLRREIAADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|15892907|ref|NP_360621.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7] gi|22257033|sp|Q92GY8|RS13_RICCN RecName: Full=30S ribosomal protein S13 gi|15620098|gb|AAL03522.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7] Length = 125 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|320538144|ref|ZP_08038039.1| 30S ribosomal protein S13 [Treponema phagedenis F0421] gi|320144961|gb|EFW36682.1| 30S ribosomal protein S13 [Treponema phagedenis F0421] Length = 121 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GI S++ IC K I P R ++ L + E+ IR + Sbjct: 1 MARIAGVDLPN-KHVNIALTYIYGISHSSAKTICEKAKIDPGRMMNDLDQDELAVIRSIL 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+DY+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR Sbjct: 60 EKDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTR 109 >gi|160871560|ref|ZP_02061692.1| ribosomal protein S13p/S18e [Rickettsiella grylli] gi|159120359|gb|EDP45697.1| ribosomal protein S13p/S18e [Rickettsiella grylli] Length = 119 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV L I+G+G + IC L I PE +V L+E ++ IRQ I Sbjct: 1 MARIAGVNIPINKHVVIGLTAIYGVGRSRALKICKGLNISPETKVKDLLEKQLDAIRQKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EGDLRR V+++IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 IT-YKIEGDLRREVSISIKRLMDLGCYRGIRHRRGLPVRGQRTRTNARTRK 110 >gi|325663037|ref|ZP_08151487.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086644|ref|ZP_08335721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470491|gb|EGC73721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409810|gb|EGG89245.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 122 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRVSSNRILEEAGVNPDTRVRDLTDEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 DETQLVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|89100323|ref|ZP_01173188.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911] gi|89084944|gb|EAR64080.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911] Length = 121 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q + + + + RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGKNTAQKVLAEAGVSEDTRVRDLTEDELNKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|127511114|ref|YP_001092311.1| 30S ribosomal protein S13 [Shewanella loihica PV-4] gi|158706276|sp|A3Q9A4|RS13_SHELP RecName: Full=30S ribosomal protein S13 gi|126636409|gb|ABO22052.1| SSU ribosomal protein S13P [Shewanella loihica PV-4] Length = 118 Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGLTRAQQICAATSIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|15612723|ref|NP_241026.1| 30S ribosomal protein S13 [Bacillus halodurans C-125] gi|6094152|sp|O50632|RS13_BACHD RecName: Full=30S ribosomal protein S13 gi|2760183|dbj|BAA24192.1| ribosomal protein S13 [Bacillus halodurans] gi|4512429|dbj|BAA75296.1| rpsM homologue (identity of 84% to B. subtilis ) [Bacillus halodurans] gi|10172772|dbj|BAB03879.1| 30S ribosomal protein S13 [Bacillus halodurans C-125] Length = 121 Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+G+G ++Q+I K + RV L E E+ +IR A+ Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGVGRSTAQEILAKANVSENTRVRDLTEEELGRIRSAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ ++VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 EE-FKVEGDLRREVSLNIKRLIEIGAYRGIRHRRGLPVRGQNTKNNSRTRK 110 >gi|225024810|ref|ZP_03714002.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC 23834] gi|224942413|gb|EEG23622.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC 23834] Length = 121 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP VV L I+GIG ++ ICN AI P+ +V L E ++ +R+ + Sbjct: 1 MARVAGVNIPNNAHVVIGLQAIYGIGASRAKLICNNAAIAPDTKVKDLTEGQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q Y+VEGDLRR + MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AQ-YEVEGDLRREITMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|317496166|ref|ZP_07954526.1| 30S ribosomal protein S13 [Gemella moribillum M424] gi|316913741|gb|EFV35227.1| 30S ribosomal protein S13 [Gemella moribillum M424] Length = 121 Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K++Q I + + + RV L ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTAQKILKEAGVSEDIRVKDLSGEQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110 >gi|238018648|ref|ZP_04599074.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748] gi|269798525|ref|YP_003312425.1| ribosomal protein S13 [Veillonella parvula DSM 2008] gi|282849889|ref|ZP_06259272.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745] gi|294792819|ref|ZP_06757966.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27] gi|294794573|ref|ZP_06759709.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44] gi|237865119|gb|EEP66409.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748] gi|269095154|gb|ACZ25145.1| ribosomal protein S13 [Veillonella parvula DSM 2008] gi|282580326|gb|EFB85726.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745] gi|294454903|gb|EFG23276.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44] gi|294456718|gb|EFG25081.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27] Length = 122 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLASEIIAKTGINPDTRVRDLSEDEVAKIRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK Sbjct: 61 DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111 >gi|150392134|ref|YP_001322183.1| 30S ribosomal protein S13 [Alkaliphilus metalliredigens QYMF] gi|166991596|sp|A6TWF6|RS13_ALKMQ RecName: Full=30S ribosomal protein S13 gi|149951996|gb|ABR50524.1| ribosomal protein S13 [Alkaliphilus metalliredigens QYMF] Length = 123 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG ++S I I + R+ L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIFGIGRQTSNKILAATGINVDTRIKDLTEEEVNELRKLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DYQVEGDLRR V++NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK Sbjct: 61 DADYQVEGDLRREVSLNIKRLKEIRCYRGIRHTKGLPVRGQKTKTNARTRK 111 >gi|229825292|ref|ZP_04451361.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC 49176] gi|229790664|gb|EEP26778.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC 49176] Length = 122 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S +I K A+ P+ R L + +V +IR I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRAKSNEILTKAAVDPDIRCKDLSDEQVGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR VAMNIKRL ++GCYRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 EESVLVEGDLRREVAMNIKRLQEIGCYRGVRHRKGLPVRGQNTKNNARTRK 111 >gi|262277115|ref|ZP_06054908.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114] gi|262224218|gb|EEY74677.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114] Length = 127 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVN+P K+V AL YI+GIG + IC +L I +RV+ L + EV++IR+ I Sbjct: 1 MARISGVNLPLNKQVHIALQYIYGIGDHYADKICKELNIEKSKRVNNLTDDEVLKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRT +NARTRK Sbjct: 61 DEKFTVEGDLRREISLNIKRLRDLGTYRGTRHRKKLPVRGQRTSSNARTRK 111 >gi|94968279|ref|YP_590327.1| 30S ribosomal protein S13 [Candidatus Koribacter versatilis Ellin345] gi|158706207|sp|Q1IS97|RS13_ACIBL RecName: Full=30S ribosomal protein S13 gi|94550329|gb|ABF40253.1| SSU ribosomal protein S13P [Candidatus Koribacter versatilis Ellin345] Length = 127 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + AL YI GIG ++ I + + R+V L E EV +IR AI Sbjct: 1 MARIAGVDLPRNKYINIALTYIFGIGNSRAKAILAEANVEANRKVSDLNEEEVNRIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E VEGDLR+ V+M+IKRL+++G YRG RHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 ENGSSVEGDLRKDVSMHIKRLIEIGSYRGYRHRRSLPVRGQRTHTNARTRKGPRKGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|51473817|ref|YP_067574.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington] gi|81390000|sp|Q68WA0|RS13_RICTY RecName: Full=30S ribosomal protein S13 gi|51460129|gb|AAU04092.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington] Length = 125 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V L + E+I++R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISRDKKVKVLTDQELIRLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|269959710|ref|ZP_06174090.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3] gi|269835633|gb|EEZ89712.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3] Length = 118 Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|260907116|ref|ZP_05915438.1| 30S ribosomal protein S13 [Brevibacterium linens BL2] Length = 122 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + I P+ RV L ++E++Q+R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGRTRASQTLTETGISPDTRVKDLSDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +QVEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTFQVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|77165766|ref|YP_344291.1| 30S ribosomal protein S13 [Nitrosococcus oceani ATCC 19707] gi|254433474|ref|ZP_05046982.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27] gi|91207709|sp|Q3J8T5|RS13_NITOC RecName: Full=30S ribosomal protein S13 gi|76884080|gb|ABA58761.1| SSU ribosomal protein S13P [Nitrosococcus oceani ATCC 19707] gi|207089807|gb|EDZ67078.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27] Length = 118 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC + +P ++++ L ++E+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALSSIYGIGLSRARKICGAVGVPSDKKIRDLSDNELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++M+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YPVEGDLRREISMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRK 110 >gi|119953289|ref|YP_945498.1| 30S ribosomal protein S13 [Borrelia turicatae 91E135] gi|254811131|sp|A1QZT6|RS13_BORT9 RecName: Full=30S ribosomal protein S13 gi|119862060|gb|AAX17828.1| SSU ribosomal protein S13P [Borrelia turicatae 91E135] Length = 125 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K I PE+R L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRARALEICRKTDILPEKRAKDLDNDEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111 >gi|187918366|ref|YP_001883929.1| 30S ribosomal protein S13 [Borrelia hermsii DAH] gi|226712700|sp|B2S0K3|RS13_BORHD RecName: Full=30S ribosomal protein S13 gi|119861214|gb|AAX17009.1| SSU ribosomal protein S13P [Borrelia hermsii DAH] Length = 125 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K + P++R +L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRARALEICEKTGVLPDKRAKELDNDEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111 >gi|293402525|ref|ZP_06646660.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304039|gb|EFE45293.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 121 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG +++ I K I + RV L + ++ IR + Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEQILAKTGISEDIRVKDLTDEQINAIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR VA+NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DS-IKVEGDLRREVALNIKRLMEIGCYRGIRHRKGLPVRGQRTKTNARTRK 110 >gi|323342812|ref|ZP_08083044.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463924|gb|EFY09118.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 121 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG +S++I K I + RV L E +V IR+ + Sbjct: 1 MARIAGIDIPRNKRVVVSLTYIYGIGLTTSKEILTKCEISEDIRVKDLTEEQVNAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +NIKRLM++G RG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 ES-IKVEGDLRREVNLNIKRLMEIGSNRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|304438386|ref|ZP_07398327.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368752|gb|EFM22436.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 122 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG +++ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAADVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|253580645|ref|ZP_04857909.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39B_FAA] gi|251848016|gb|EES75982.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39BFAA] gi|291548008|emb|CBL21116.1| 30S ribosomal protein S13 [Ruminococcus sp. SR1/5] Length = 122 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I K + P+ RV L + EV ++ I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAKAEVNPDTRVRDLTDDEVKRLSAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|28897053|ref|NP_796658.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633] gi|149192391|ref|ZP_01870592.1| 30S ribosomal protein S13 [Vibrio shilonii AK1] gi|260361371|ref|ZP_05774436.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030] gi|260779481|ref|ZP_05888371.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC BAA-450] gi|260877971|ref|ZP_05890326.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034] gi|260903549|ref|ZP_05911944.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037] gi|323492141|ref|ZP_08097303.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546] gi|323495526|ref|ZP_08100600.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326] gi|32363283|sp|Q87SZ2|RS13_VIBPA RecName: Full=30S ribosomal protein S13 gi|28805261|dbj|BAC58542.1| ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633] gi|148833782|gb|EDL50818.1| 30S ribosomal protein S13 [Vibrio shilonii AK1] gi|260604290|gb|EEX30594.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC BAA-450] gi|308089753|gb|EFO39448.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034] gi|308109061|gb|EFO46601.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037] gi|308114566|gb|EFO52106.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030] gi|323313702|gb|EGA66804.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546] gi|323319407|gb|EGA72344.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326] gi|328471856|gb|EGF42733.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus 10329] Length = 118 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|238928131|ref|ZP_04659891.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531] gi|238884091|gb|EEQ47729.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531] Length = 122 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG +++ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAANVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|92112576|ref|YP_572504.1| 30S ribosomal protein S13 [Chromohalobacter salexigens DSM 3043] gi|122420779|sp|Q1R0F3|RS13_CHRSD RecName: Full=30S ribosomal protein S13 gi|91795666|gb|ABE57805.1| SSU ribosomal protein S13P [Chromohalobacter salexigens DSM 3043] Length = 118 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI GIG +Q+IC I P +V L EV +R + Sbjct: 1 MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICAATGIAPTAKVQDLSAEEVDTLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR +NIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YTVEGDLRRDTTLNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRK 110 >gi|323700829|ref|ZP_08112741.1| 30S ribosomal protein S13 [Desulfovibrio sp. ND132] gi|323460761|gb|EGB16626.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans ND132] Length = 123 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + I I L +V QIR I Sbjct: 1 MARIAGVDLPRNKRIDIALTYIYGIGRTMAMQILETTGIDWTMSSDDLTADDVNQIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR + NIKRLMD+GCYRGLRHRRGLPVRGQ++ TNARTRK Sbjct: 61 ENNYKVEGDLRREITTNIKRLMDIGCYRGLRHRRGLPVRGQKSKTNARTRK 111 >gi|269958605|ref|YP_003328392.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel] gi|269848434|gb|ACZ49078.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel] Length = 123 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I + V L + +V++IR I Sbjct: 1 MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICKGCGISEDALVSSLGDEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307823463|ref|ZP_07653692.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96] gi|307735448|gb|EFO06296.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96] Length = 118 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G +++ +IC ++ I P ++ +L E ++ IR + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGRQTASEICVEVGITPSIKIKELTEEQLEAIRNVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 SK-MTVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRK 110 >gi|157826041|ref|YP_001493761.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford] gi|166231919|sp|A8GPC8|RS13_RICAH RecName: Full=30S ribosomal protein S13 gi|157799999|gb|ABV75253.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford] Length = 125 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L Y++G+G + +ICNK I +++ +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYVYGLGPAMAAEICNKAKISKDKKAKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|307543847|ref|YP_003896326.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581] gi|307215871|emb|CBV41141.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581] Length = 118 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI GIG +Q+IC I P +V +L EV +R + Sbjct: 1 MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICVAAGIAPTTKVQELSSEEVDTLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP+ GQRT TNARTRK Sbjct: 61 GK-YTVEGDLRRDVTLNIKRLMDLGCYRGLRHRRGLPLNGQRTKTNARTRK 110 >gi|296268578|ref|YP_003651210.1| 30S ribosomal protein S13 [Thermobispora bispora DSM 43833] gi|296091365|gb|ADG87317.1| ribosomal protein S13 [Thermobispora bispora DSM 43833] Length = 126 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 86/111 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +++I I P+ RV+QL ++E++ IR I Sbjct: 1 MARLVGVDLPRDKRLEIALTYIYGIGRSRAKEILKATGINPDLRVYQLTDAELVPIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +I+R +++GCY+G+RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRKGLPVRGQRTQTNARTRK 111 >gi|260589252|ref|ZP_05855165.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583] gi|331082660|ref|ZP_08331783.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540333|gb|EEX20902.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583] gi|330400279|gb|EGG79921.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA] Length = 123 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/112 (59%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I K + P+ RV + + EV +IR AI Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILEKAGVNPDTRVRDVTDEEVGKIRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 EELQIPVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 112 >gi|225873053|ref|YP_002754512.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196] gi|254811119|sp|C1F617|RS13_ACIC5 RecName: Full=30S ribosomal protein S13 gi|225793801|gb|ACO33891.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196] Length = 127 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR K+ AL YI+GIG + I + P R++ L E EV +IRQ I Sbjct: 1 MARVAGVDLPRNKQARIALTYIYGIGNPRALRILTAANVDPFRKIQDLSEDEVNRIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + QVEGDLR+ VAM+IKRL+++ YRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 EAEGQVEGDLRKDVAMHIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300690183|ref|YP_003751178.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07] gi|299077243|emb|CBJ49869.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07] Length = 121 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I+G+G +Q IC +P ++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHAVIGLTAIYGVGRSRAQKICEATGVPTNKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K G+A Sbjct: 61 NR-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGIAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261250395|ref|ZP_05942970.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891] gi|260938964|gb|EEX94951.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891] Length = 118 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELSEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|320160438|ref|YP_004173662.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1] gi|319994291|dbj|BAJ63062.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1] Length = 128 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI+GIG +++ + P+ RV L E+EV +R I Sbjct: 1 MARIEGVDLPRNKRVEVALTYIYGIGPTRARETLAATKVNPDTRVKDLTEAEVNALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y VEGDLRR V M+IKRL+++GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 ARNYTVEGDLRREVQMSIKRLIEIGCYRGLRHRRNLPVRGQRTRTNARTRK 111 >gi|300857222|ref|YP_003782206.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528] gi|300437337|gb|ADK17104.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528] Length = 125 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG +SQ I + + P+ RV L E EV +R + Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLSTSQKILKEAGVNPDTRVKDLTEEEVNSLRNYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +EGDLRR +A+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 -KNVTIEGDLRREIALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRK 110 >gi|224542263|ref|ZP_03682802.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM 15897] gi|224524805|gb|EEF93910.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM 15897] Length = 121 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG +++ I + + RV L E E +IR+ + Sbjct: 1 MARIAGIDIPRDKRVVVSLTYIYGIGPTTAKKILAAAGVSEDVRVKDLTEEEETKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + EGDLRR +NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EH-IKTEGDLRRETQLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|86148806|ref|ZP_01067073.1| 30S ribosomal protein S13 [Vibrio sp. MED222] gi|148982229|ref|ZP_01816655.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3] gi|218710727|ref|YP_002418348.1| 30S ribosomal protein S13 [Vibrio splendidus LGP32] gi|85833396|gb|EAQ51587.1| 30S ribosomal protein S13 [Vibrio sp. MED222] gi|145960591|gb|EDK25944.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3] gi|218323746|emb|CAV20100.1| ribosomal protein S13 [Vibrio splendidus LGP32] Length = 118 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|221195396|ref|ZP_03568451.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626] gi|221184583|gb|EEE16975.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626] Length = 122 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG + IC + + + RV L E EV +IR I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGIGQTRATKICAETGVNVDTRVKDLTEDEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR V N RLM++GCYRGLRHR+GLPV GQRTHTNARTRK Sbjct: 61 DANYTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111 >gi|154249792|ref|YP_001410617.1| 30S ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1] gi|171769363|sp|A7HM27|RS13_FERNB RecName: Full=30S ribosomal protein S13 gi|154153728|gb|ABS60960.1| ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1] Length = 123 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL Y++GIG + +IC + P++RV +L E E+ +I I Sbjct: 1 MARIVGVEIPSNKKVHIALRYLYGIGPTRAMEICKNTGVDPDKRVKELTEDEISKIASFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+Y+VEG+LR V NIKRLMD+GCYRGLRH+ GLPVRGQRT +NARTRK Sbjct: 61 QQNYKVEGELRTEVMRNIKRLMDIGCYRGLRHKLGLPVRGQRTRSNARTRK 111 >gi|312884681|ref|ZP_07744382.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367594|gb|EFP95145.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122] Length = 118 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|223983944|ref|ZP_03634104.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM 12042] gi|223964136|gb|EEF68488.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM 12042] Length = 121 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR K VV +L YI+GIG +++ I K I + RV L + +V IRQ + Sbjct: 1 MARIAGIDIPRDKHVVVSLTYIYGIGSSTAKTILKKCGISEDIRVKDLTDEQVNAIRQEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q +VEGDLRR +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DQ-IKVEGDLRRETQLNIKRLMEIGCYRGVRHRKGLPVRGQRTKTNARTRK 110 >gi|330837633|ref|YP_004412274.1| 30S ribosomal protein S13P [Spirochaeta coccoides DSM 17374] gi|329749536|gb|AEC02892.1| SSU ribosomal protein S13P [Spirochaeta coccoides DSM 17374] Length = 121 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/110 (58%), Positives = 84/110 (76%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ IC + A+ P+ R++ L ++ ++R+ I Sbjct: 1 MARIAGVDLPN-KAVKIALTYIYGIGNYSAAKICEQTAVNPDERLNNLSSEDLSKLREII 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +++VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR Sbjct: 60 ENNFKVEGRLRTEVGLNIKRLMDIGCYRGLRHRKGLPVRGQRTKTNARTR 109 >gi|56416982|ref|YP_154056.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries] gi|222475350|ref|YP_002563767.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida] gi|254995158|ref|ZP_05277348.1| 30S ribosomal protein S13 [Anaplasma marginale str. Mississippi] gi|255003332|ref|ZP_05278296.1| 30S ribosomal protein S13 [Anaplasma marginale str. Puerto Rico] gi|255004456|ref|ZP_05279257.1| 30S ribosomal protein S13 [Anaplasma marginale str. Virginia] gi|81358978|sp|Q5PA79|RS13_ANAMM RecName: Full=30S ribosomal protein S13 gi|254811123|sp|B9KJ49|RS13_ANAMF RecName: Full=30S ribosomal protein S13 gi|56388214|gb|AAV86801.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries] gi|222419488|gb|ACM49511.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida] Length = 123 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/122 (57%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I + V L + +V++IR I Sbjct: 1 MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICEGCGIGEDVLVSSLSDEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|313893169|ref|ZP_07826746.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str. F0412] gi|313442522|gb|EFR60937.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str. F0412] Length = 122 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV++IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLAAEIIAKTGINPDTRVRDLSEDEVVKIRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK Sbjct: 61 DAEYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111 >gi|260438191|ref|ZP_05792007.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876] gi|292809381|gb|EFF68586.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876] Length = 122 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + + P RV L + EV +I+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVSSNRILAEAKVDPNTRVKDLTDEEVGRIKDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|269217221|ref|ZP_06161075.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122] gi|269129358|gb|EEZ60443.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122] Length = 122 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ L YI+GIG S++ I + P+ RV + E ++ +IR+ I Sbjct: 1 MPRLFGVDLPREKRIETGLTYIYGIGDTSAKKIIAATGVNPDIRVKDISEDDLQKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+ +EGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DQNMTIEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|119773376|ref|YP_926116.1| 30S ribosomal protein S13 [Shewanella amazonensis SB2B] gi|158706275|sp|A1S240|RS13_SHEAM RecName: Full=30S ribosomal protein S13 gi|119765876|gb|ABL98446.1| SSU ribosomal protein S13P [Shewanella amazonensis SB2B] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC AI + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGRTRAKAICAATAIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|303247015|ref|ZP_07333291.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ] gi|302491722|gb|EFL51605.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ] Length = 123 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG ++ I + + L E IR+ I Sbjct: 1 MARIAGVDLPKNKRMDIALTYIYGIGRTTALTILEASGVDWTKNSDALTPEETNTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V NIKRLMD+GCYRG RHRRGLP RGQRTHTNARTRK +G +A+ Sbjct: 61 EANHKVEGDLRRDVTANIKRLMDIGCYRGFRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300088172|ref|YP_003758694.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527905|gb|ADJ26373.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 129 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K+VV +L YI+GIG S I ++L+I RV L E E+ ++R+ I Sbjct: 1 MARIAGVDIPRNKQVVYSLPYIYGIGPTLSARILDRLSIEKTTRVSDLTEEELNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLR+ + +N+KRL D+G YRG RHRRGLPV GQRT TNARTR+ Sbjct: 61 DKEYRVEGDLRKEITLNVKRLTDIGSYRGQRHRRGLPVHGQRTKTNARTRR 111 >gi|310941931|dbj|BAJ24319.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAVKIKDLSDEQIEQLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|77461279|ref|YP_350786.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1] gi|91207719|sp|Q3K609|RS13_PSEPF RecName: Full=30S ribosomal protein S13 gi|77385282|gb|ABA76795.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1] gi|310941781|dbj|BAJ24244.1| 30S ribosomal protein S13 [Pseudomonas chlororaphis subsp. chlororaphis] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAETGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|58584578|ref|YP_198151.1| 30S ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497932|sp|Q5GSW5|RS13_WOLTR RecName: Full=30S ribosomal protein S13 gi|58418894|gb|AAW70909.1| Ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 122 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K + L YI+GIG ++ IC+ I +RV +L + ++ +I I Sbjct: 1 MTRIAGVNVPVKKCIPFGLTYIYGIGISTANIICHACGIDKSKRVSELRDKDIEKINSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q+Y +EGDLR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK Sbjct: 61 RQNYSIEGDLRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111 >gi|157960035|ref|YP_001500069.1| 30S ribosomal protein S13 [Shewanella pealeana ATCC 700345] gi|167626018|ref|YP_001676312.1| 30S ribosomal protein S13 [Shewanella halifaxensis HAW-EB4] gi|212634851|ref|YP_002311376.1| 30S ribosomal protein S13 [Shewanella piezotolerans WP3] gi|189044295|sp|B0TLZ1|RS13_SHEHH RecName: Full=30S ribosomal protein S13 gi|189044296|sp|A8GYZ7|RS13_SHEPA RecName: Full=30S ribosomal protein S13 gi|226712785|sp|B8CNF5|RS13_SHEPW RecName: Full=30S ribosomal protein S13 gi|157845035|gb|ABV85534.1| ribosomal protein S13 [Shewanella pealeana ATCC 700345] gi|167356040|gb|ABZ78653.1| ribosomal protein S13 [Shewanella halifaxensis HAW-EB4] gi|212556335|gb|ACJ28789.1| Ribosomal protein S13 [Shewanella piezotolerans WP3] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGRTRAQAICAATSIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 -ANYIVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|170760916|ref|YP_001788795.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch Maree] gi|226712720|sp|B1KSJ9|RS13_CLOBM RecName: Full=30S ribosomal protein S13 gi|169407905|gb|ACA56316.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch Maree] Length = 123 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KRV L YI+GIG +SQ+I + P+ RV L E EV IR + Sbjct: 1 MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILEATGVNPDTRVKDLSEEEVNAIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK Sbjct: 61 NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRK 111 >gi|262392494|ref|YP_003284348.1| 30S ribosomal protein S13p [Vibrio sp. Ex25] gi|269964715|ref|ZP_06178953.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B] gi|262336088|gb|ACY49883.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. Ex25] gi|269830614|gb|EEZ84835.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|238898905|ref|YP_002924587.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259494682|sp|C4K796|RS13_HAMD5 RecName: Full=30S ribosomal protein S13 gi|229466665|gb|ACQ68439.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 118 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ DIC K + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDKKHAVIALTSIYGIGRTTALDICAKTGVSAAVKISELSEKQIEELREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVTLNIKRLMDIGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|148381395|ref|YP_001255936.1| ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502] gi|153932993|ref|YP_001385770.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397] gi|153937296|ref|YP_001389177.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall] gi|153939368|ref|YP_001392808.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland] gi|168178858|ref|ZP_02613522.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916] gi|168181890|ref|ZP_02616554.1| 30S ribosomal protein S13 [Clostridium botulinum Bf] gi|170757214|ref|YP_001783095.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra] gi|187776601|ref|ZP_02993074.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC 15579] gi|226950907|ref|YP_002805998.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto] gi|237796916|ref|YP_002864468.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657] gi|166231909|sp|A7FZ47|RS13_CLOB1 RecName: Full=30S ribosomal protein S13 gi|166231910|sp|A5I7I0|RS13_CLOBH RecName: Full=30S ribosomal protein S13 gi|166231911|sp|A7GJ48|RS13_CLOBL RecName: Full=30S ribosomal protein S13 gi|226712719|sp|B1IGC8|RS13_CLOBK RecName: Full=30S ribosomal protein S13 gi|254811140|sp|C1FMS5|RS13_CLOBJ RecName: Full=30S ribosomal protein S13 gi|259494669|sp|C3KVM5|RS13_CLOB6 RecName: Full=30S ribosomal protein S13 gi|148290879|emb|CAL85015.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502] gi|152929037|gb|ABS34537.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397] gi|152933210|gb|ABS38709.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall] gi|152935264|gb|ABS40762.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland] gi|169122426|gb|ACA46262.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra] gi|182670171|gb|EDT82147.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916] gi|182674848|gb|EDT86809.1| 30S ribosomal protein S13 [Clostridium botulinum Bf] gi|187775260|gb|EDU39062.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC 15579] gi|226843905|gb|ACO86571.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto] gi|229261193|gb|ACQ52226.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657] gi|295320788|gb|ADG01166.1| 30S ribosomal protein S13 [Clostridium botulinum F str. 230613] gi|322807780|emb|CBZ05355.1| SSU ribosomal protein S13p (S18e) [Clostridium botulinum H04402 065] Length = 123 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KRV L YI+GIG +SQ+I + P+ RV L E EV IR + Sbjct: 1 MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILKATGVNPDTRVKDLSEEEVNAIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK Sbjct: 61 NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRK 111 >gi|229829401|ref|ZP_04455470.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM 14600] gi|229791832|gb|EEP27946.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM 14600] Length = 122 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS + + P+ RV L + EV +I AI Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRASSDAVLASANVDPDTRVKDLTDDEVKRISNAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR A++IKRL ++GCYRG RHR+GLPVRGQ+T TNARTRK Sbjct: 61 EETLTVEGDLRRQTALDIKRLQEIGCYRGKRHRQGLPVRGQKTKTNARTRK 111 >gi|225849520|ref|YP_002729685.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644417|gb|ACN99467.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1] Length = 116 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPEELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y+VEGDLRR VA+ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+ Sbjct: 61 EQNYKVEGDLRREVAVAIKRLVDMGCYRGVRHRLGLPVRGQRTKTNAKTRR 111 >gi|158319569|ref|YP_001512076.1| 30S ribosomal protein S13 [Alkaliphilus oremlandii OhILAs] gi|166991597|sp|A8MLG6|RS13_ALKOO RecName: Full=30S ribosomal protein S13 gi|158139768|gb|ABW18080.1| ribosomal protein S13 [Alkaliphilus oremlandii OhILAs] Length = 123 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG K+S +I I P+ R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIFGIGRKTSNNILAAAGINPDTRIKDLTEEEVNNLRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D+ VEGDLRR +A+NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK Sbjct: 61 DADHHVEGDLRREIALNIKRLKEIRCYRGIRHIKGLPVRGQKTKTNARTRK 111 >gi|237786337|ref|YP_002907042.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM 44385] gi|259494670|sp|C4LKZ4|RS13_CORK4 RecName: Full=30S ribosomal protein S13 gi|237759249|gb|ACR18499.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM 44385] Length = 122 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++ + K I P+ R L + +V ++R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTSAKQLLEKTEISPDLRTDALTDDQVAKLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EAEYTVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|56418666|ref|YP_145984.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426] gi|138893808|ref|YP_001124261.1| 30S ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2] gi|196250999|ref|ZP_03149681.1| ribosomal protein S13 [Geobacillus sp. G11MC16] gi|297528507|ref|YP_003669782.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3] gi|81348360|sp|Q5L3R4|RS13_GEOKA RecName: Full=30S ribosomal protein S13 gi|158706233|sp|A4IJL2|RS13_GEOTN RecName: Full=30S ribosomal protein S13 gi|56378508|dbj|BAD74416.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426] gi|134265321|gb|ABO65516.1| Ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2] gi|196209471|gb|EDY04248.1| ribosomal protein S13 [Geobacillus sp. G11MC16] gi|297251759|gb|ADI25205.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3] Length = 121 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|289706557|ref|ZP_06502907.1| 30S ribosomal protein S13 [Micrococcus luteus SK58] gi|289556692|gb|EFD50033.1| 30S ribosomal protein S13 [Micrococcus luteus SK58] Length = 122 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ + I P RV L + +++Q+R I Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLSATGIDPNIRVKDLSDEQLVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|258406162|ref|YP_003198904.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692] gi|257798389|gb|ACV69326.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692] Length = 123 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR AL YI+GIG ++ I + + + ++ L EV IR + Sbjct: 1 MARIAGVDLPRNKRADIALTYIYGIGRTTALAILDSVGVDWTKKTDALSNDEVNSIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y+VEGDLRR V NIKRLMD+GCYRGLRHRR LP RGQRT TNARTRK Sbjct: 61 EKTYKVEGDLRREVRANIKRLMDIGCYRGLRHRRSLPARGQRTGTNARTRK 111 >gi|269123122|ref|YP_003305699.1| 30S ribosomal protein S13 [Streptobacillus moniliformis DSM 12112] gi|268314448|gb|ACZ00822.1| ribosomal protein S13 [Streptobacillus moniliformis DSM 12112] Length = 121 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG S +I K I + +V L E EV +IR + Sbjct: 1 MARIAGVDIPRNKRVEVSLTYIYGIGRSISNEILVKAGINRDTKVKDLTEEEVGKIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL D+ CYRGLRHR GLPVRGQ+T TNARTRK K VA+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLTDIKCYRGLRHRMGLPVRGQKTKTNARTRKGPAKMAVAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|309389909|gb|ADO77789.1| SSU ribosomal protein S13P [Halanaerobium praevalens DSM 2228] Length = 126 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++Q I I + R+ L E+E+ +R+ I Sbjct: 1 MARIEGVDLPRNKRVEIGLTYIYGIGRTTAQSIVANTGINSDTRIKDLTEAEISDLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y VEG+LRR +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DENYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111 >gi|218961409|ref|YP_001741184.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas acidaminovorans] gi|167730066|emb|CAO80978.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas acidaminovorans] Length = 122 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA IAG+ +P+ KR+ L YI+GIG S+++IC K I ++V L E +R I Sbjct: 1 MAHIAGIELPKNKRLFIGLTYIYGIGRSSAREICKKANIDEMKKVADLTMEEEKILRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEG LR VAMNIKRLM++GCYRGLRH+RGLPVRGQRTHTNARTRK Sbjct: 61 HNEYVVEGALRTQVAMNIKRLMEIGCYRGLRHKRGLPVRGQRTHTNARTRK 111 >gi|260770935|ref|ZP_05879864.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972] gi|260614172|gb|EEX39362.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972] gi|315178981|gb|ADT85895.1| 30S ribosomal protein S13 [Vibrio furnissii NCTC 11218] Length = 118 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEHVKISELTEDQINQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|300114714|ref|YP_003761289.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113] gi|299540651|gb|ADJ28968.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113] Length = 118 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC + +P +++V L ++E+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALSSIYGIGLSRARKICKAVGVPSDKKVRDLSDNELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++M+IKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YPVEGDLRRGISMDIKRLMDLGCYRGHRHRRGLPVRGQRTQTNARTRK 110 >gi|288942050|ref|YP_003444290.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180] gi|288897422|gb|ADC63258.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180] Length = 118 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/111 (62%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V AL I+GIG + IC+ I +V L E EV ++R + Sbjct: 1 MARIAGVNIPDKKHAVIALTAIYGIGRTRAGLICDAAGIARTTKVQSLTEEEVDKLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-YSVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRK 110 >gi|225552343|ref|ZP_03773283.1| ribosomal protein S13p/S18e [Borrelia sp. SV1] gi|225371341|gb|EEH00771.1| ribosomal protein S13p/S18e [Borrelia sp. SV1] Length = 125 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKVAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|255020789|ref|ZP_05292847.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC 51756] gi|254969785|gb|EET27289.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC 51756] Length = 118 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K++ AL YI+GIG S+ I +P + RV + E+E+ +IR + Sbjct: 1 MARIAGVNIPNNKQIETALTYIYGIGPSRSKQILAAAEVPFDIRVKDISEAELERIRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK Sbjct: 61 GK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRK 110 >gi|304413167|ref|ZP_07394640.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola LSR1] gi|304284010|gb|EFL92403.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola LSR1] Length = 118 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC + ++ +L E E+ ++R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTGAQKICGAAGVAESVKISELSEEEINKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YPIEGDLRRQVTLNIKRLIDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|319654894|ref|ZP_08008969.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2] gi|317393457|gb|EFV74220.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2] Length = 121 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDVPREKRVVISLTYIFGIGKSTAQKVLAEAGVSEDTRVRDLTEDELNKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|188996214|ref|YP_001930465.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931281|gb|ACD65911.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1] Length = 116 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRRFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y+VEGDLRR V++ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+ Sbjct: 61 EQNYKVEGDLRREVSLAIKRLVDMGCYRGIRHRLGLPVRGQRTKTNAKTRR 111 >gi|26554442|ref|NP_758376.1| 30S ribosomal protein S13 [Mycoplasma penetrans HF-2] gi|32363326|sp|Q8EUD6|RS13_MYCPE RecName: Full=30S ribosomal protein S13 gi|26454452|dbj|BAC44780.1| ribosomal protein S13 [Mycoplasma penetrans HF-2] Length = 124 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KRVV +L YI GIG SQ+I +K I ++V L E E+ IR+ I Sbjct: 1 MARILGVDIPNNKRVVISLTYIFGIGKSRSQEILSKAKIDENKKVSALSEEELATIRK-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y +EGDLRR VAMNIKRLM++G YRG+RHRR LPVRGQRT NARTRK Sbjct: 60 ASEYVIEGDLRREVAMNIKRLMEIGSYRGIRHRRNLPVRGQRTKCNARTRK 110 >gi|270264351|ref|ZP_06192617.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13] gi|270041487|gb|EFA14585.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13] Length = 118 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|154483164|ref|ZP_02025612.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC 27560] gi|149735972|gb|EDM51858.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC 27560] Length = 127 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS+ I + + P+ R L + EV +I I Sbjct: 6 MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILTEAGVNPDTRCKDLTDDEVKKISDVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ T NARTRK Sbjct: 66 DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQNTKNNARTRK 116 >gi|328955888|ref|YP_004373221.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2] gi|328456212|gb|AEB07406.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2] Length = 124 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++ IC I P+ RV L E EV IR I Sbjct: 1 MARINGVDLPREKRVEIGLTYIYGIGRTTATKICVTCNINPDTRVRDLTEDEVNAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR N+KRLMD+G YRGLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DKNRIMVEGDLRRDQNQNVKRLMDIGAYRGLRHRRGLPVRGQRTHTNARTRK 112 >gi|221218102|ref|ZP_03589568.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a] gi|224532893|ref|ZP_03673505.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23] gi|224533622|ref|ZP_03674211.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a] gi|225548633|ref|ZP_03769680.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a] gi|225549635|ref|ZP_03770601.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a] gi|221192050|gb|EEE18271.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a] gi|224512169|gb|EEF82558.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23] gi|224513295|gb|EEF83657.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a] gi|225369912|gb|EEG99359.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a] gi|225370663|gb|EEH00099.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a] gi|312148169|gb|ADQ30828.1| ribosomal protein S13p/S18e [Borrelia burgdorferi JD1] Length = 125 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|114330595|ref|YP_746817.1| 30S ribosomal protein S13 [Nitrosomonas eutropha C91] gi|122314411|sp|Q0AIH4|RS13_NITEC RecName: Full=30S ribosomal protein S13 gi|114307609|gb|ABI58852.1| SSU ribosomal protein S13P [Nitrosomonas eutropha C91] Length = 119 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V AL I+GIG +++ IC L IPP ++ +L + ++ ++R +I Sbjct: 1 MARIAGVNLPSNKHVNIALTAIYGIGNSTARKICTDLDIPPFIKLKELTDGKLEELRNSI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-LLVEGDLRREVSMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|51245001|ref|YP_064885.1| 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54] gi|81642539|sp|Q6AP46|RS13_DESPS RecName: Full=30S ribosomal protein S13 gi|50876038|emb|CAG35878.1| probable 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54] Length = 121 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/121 (55%), Positives = 83/121 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K + RAL YIHGIG S++ I + + +P L V +IR+ I Sbjct: 1 MARIAGIDLPKNKHIDRALTYIHGIGLTSARKILDAVELPYTMNSDDLDGETVNRIRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEGD RR V+M+IKRL DLGCYRG RHR GLP RGQ+T TNARTRK +G R Sbjct: 61 EADYTVEGDRRREVSMDIKRLTDLGCYRGRRHRMGLPCRGQKTKTNARTRKGPRRGAARR 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|15642569|ref|NP_232202.1| 30S ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674839|ref|YP_001218068.1| 30S ribosomal protein S13 [Vibrio cholerae O395] gi|153217778|ref|ZP_01951421.1| ribosomal protein S13 [Vibrio cholerae 1587] gi|153827709|ref|ZP_01980376.1| ribosomal protein S13 [Vibrio cholerae MZO-2] gi|153831169|ref|ZP_01983836.1| ribosomal protein S13 [Vibrio cholerae 623-39] gi|227082691|ref|YP_002811242.1| ribosomal protein S13 [Vibrio cholerae M66-2] gi|229507374|ref|ZP_04396879.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286] gi|229509702|ref|ZP_04399183.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33] gi|229513497|ref|ZP_04402961.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21] gi|229516827|ref|ZP_04406273.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9] gi|229521640|ref|ZP_04411058.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80] gi|229527496|ref|ZP_04416888.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)] gi|229606880|ref|YP_002877528.1| 30S ribosomal protein S13 [Vibrio cholerae MJ-1236] gi|254292239|ref|ZP_04963002.1| ribosomal protein S13 [Vibrio cholerae AM-19226] gi|254851114|ref|ZP_05240464.1| ribosomal protein S13 [Vibrio cholerae MO10] gi|255744457|ref|ZP_05418409.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101] gi|258622734|ref|ZP_05717752.1| 30S ribosomal protein S13 [Vibrio mimicus VM573] gi|258625762|ref|ZP_05720641.1| 30S ribosomal protein S13 [Vibrio mimicus VM603] gi|261211129|ref|ZP_05925418.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341] gi|262166595|ref|ZP_06034332.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223] gi|262170489|ref|ZP_06038167.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451] gi|262401861|ref|ZP_06078426.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586] gi|297581416|ref|ZP_06943339.1| ribosomal protein S13 [Vibrio cholerae RC385] gi|298500602|ref|ZP_07010406.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757] gi|32363415|sp|Q9KP05|RS13_VIBCH RecName: Full=30S ribosomal protein S13 gi|9657160|gb|AAF95715.1| ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124113315|gb|EAY32135.1| ribosomal protein S13 [Vibrio cholerae 1587] gi|146316722|gb|ABQ21261.1| ribosomal protein S13 [Vibrio cholerae O395] gi|148873356|gb|EDL71491.1| ribosomal protein S13 [Vibrio cholerae 623-39] gi|149737818|gb|EDM52723.1| ribosomal protein S13 [Vibrio cholerae MZO-2] gi|150421841|gb|EDN13825.1| ribosomal protein S13 [Vibrio cholerae AM-19226] gi|227010579|gb|ACP06791.1| ribosomal protein S13 [Vibrio cholerae M66-2] gi|227014463|gb|ACP10673.1| ribosomal protein S13 [Vibrio cholerae O395] gi|229335128|gb|EEO00613.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)] gi|229341234|gb|EEO06238.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80] gi|229345890|gb|EEO10862.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9] gi|229349374|gb|EEO14330.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21] gi|229353176|gb|EEO18115.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33] gi|229354879|gb|EEO19800.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286] gi|229369535|gb|ACQ59958.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae MJ-1236] gi|254846819|gb|EET25233.1| ribosomal protein S13 [Vibrio cholerae MO10] gi|255737982|gb|EET93375.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101] gi|258582000|gb|EEW06870.1| 30S ribosomal protein S13 [Vibrio mimicus VM603] gi|258584922|gb|EEW09653.1| 30S ribosomal protein S13 [Vibrio mimicus VM573] gi|260839630|gb|EEX66241.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341] gi|261891565|gb|EEY37551.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451] gi|262026311|gb|EEY44979.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223] gi|262351833|gb|EEZ00964.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586] gi|297534254|gb|EFH73092.1| ribosomal protein S13 [Vibrio cholerae RC385] gi|297540771|gb|EFH76828.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757] gi|327485056|gb|AEA79463.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae LMA3894-4] Length = 118 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I L I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|51598755|ref|YP_072943.1| 30S ribosomal protein S13 [Borrelia garinii PBi] gi|219684427|ref|ZP_03539371.1| ribosomal protein S13p/S18e [Borrelia garinii PBr] gi|219685178|ref|ZP_03539998.1| ribosomal protein S13p/S18e [Borrelia garinii Far04] gi|81609962|sp|Q661C0|RS13_BORGA RecName: Full=30S ribosomal protein S13 gi|51573326|gb|AAU07351.1| ribosomal protein S13 [Borrelia garinii PBi] gi|219672416|gb|EED29469.1| ribosomal protein S13p/S18e [Borrelia garinii PBr] gi|219673274|gb|EED30293.1| ribosomal protein S13p/S18e [Borrelia garinii Far04] Length = 125 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|28867876|ref|NP_790495.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000] gi|66047754|ref|YP_237595.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a] gi|71733419|ref|YP_276684.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213969236|ref|ZP_03397374.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1] gi|237797454|ref|ZP_04585915.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257483207|ref|ZP_05637248.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623827|ref|ZP_06456781.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648920|ref|ZP_06480263.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675510|ref|ZP_06496400.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae FF5] gi|298489074|ref|ZP_07007096.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301381743|ref|ZP_07230161.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato Max13] gi|302061057|ref|ZP_07252598.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato K40] gi|302130802|ref|ZP_07256792.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302189299|ref|ZP_07265972.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae 642] gi|32363285|sp|Q889U9|RS13_PSESM RecName: Full=30S ribosomal protein S13 gi|75500421|sp|Q4ZMR5|RS13_PSEU2 RecName: Full=30S ribosomal protein S13 gi|91207716|sp|Q48D58|RS13_PSE14 RecName: Full=30S ribosomal protein S13 gi|28851112|gb|AAO54190.1| ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000] gi|63258461|gb|AAY39557.1| Ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a] gi|71553972|gb|AAZ33183.1| ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213925914|gb|EEB59471.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1] gi|298156386|gb|EFH97484.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322300|gb|EFW78394.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. B076] gi|320331958|gb|EFW87894.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. race 4] gi|330869409|gb|EGH04118.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879397|gb|EGH13546.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879420|gb|EGH13569.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330891910|gb|EGH24571.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. mori str. 301020] gi|330899714|gb|EGH31133.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940912|gb|EGH43863.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. pisi str. 1704B] gi|330962503|gb|EGH62763.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330966889|gb|EGH67149.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330969799|gb|EGH69865.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330976662|gb|EGH76705.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988260|gb|EGH86363.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012435|gb|EGH92491.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331018182|gb|EGH98238.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str. M302278PT] gi|331020304|gb|EGI00361.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 118 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|74316445|ref|YP_314185.1| 30S ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259] gi|91207631|sp|Q3SLM7|RS13_THIDA RecName: Full=30S ribosomal protein S13 gi|74055940|gb|AAZ96380.1| ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259] Length = 118 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V AL I+GIG +S IC I ++ L E+E+ ++R+ + Sbjct: 1 MARIAGVNIPNHQHAVIALTAIYGIGRTTSGKICEAAGIAQTSKIKDLSEAEMERLREGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TNARTRK Sbjct: 61 SK-FTVEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNARTRK 110 >gi|313680490|ref|YP_004058229.1| SSU ribosomal protein s13p [Oceanithermus profundus DSM 14977] gi|313153205|gb|ADR37056.1| SSU ribosomal protein S13P [Oceanithermus profundus DSM 14977] Length = 126 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ I RV L E +V+++R + Sbjct: 1 MARIAGVEIPRNKRVEIALTYIYGIGRTRAKEALEATGIDGSIRVKDLSEQDVVKLRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 ENKWKLEGELRSEVQSNIKRLMDIGCYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|266620237|ref|ZP_06113172.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479] gi|288868141|gb|EFD00440.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479] Length = 122 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 ADSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111 >gi|73661996|ref|YP_300777.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581616|sp|Q49ZE4|RS13_STAS1 RecName: Full=30S ribosomal protein S13 gi|72494511|dbj|BAE17832.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 121 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + PE RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTTTANKIAEEANVSPETRVKDLTDDELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 D-NYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|157372755|ref|YP_001480744.1| 30S ribosomal protein S13 [Serratia proteamaculans 568] gi|166991603|sp|A8GKH6|RS13_SERP5 RecName: Full=30S ribosomal protein S13 gi|157324519|gb|ABV43616.1| ribosomal protein S13 [Serratia proteamaculans 568] Length = 118 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAEHVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|289423653|ref|ZP_06425452.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L] gi|289155903|gb|EFD04569.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L] Length = 123 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I + R+ L + EV +R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGISKDARIKDLSDDEVNVLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++DY VEGDLRR +++NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK Sbjct: 61 DEDYLVEGDLRREISLNIKRLRDIKCYRGMRHAKGLPLRGQKTKTNARTRK 111 >gi|325981827|ref|YP_004294229.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212] gi|325531346|gb|ADZ26067.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212] Length = 119 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + AL I+GIG SS D+C + I + ++ L E ++ IR + Sbjct: 1 MARIAGVNIPNHKHIGIALTSIYGIGRTSSTDLCKAVGIDIDIKLKDLSEDQIELIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 SK-LTIEGDLRREISMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|27364193|ref|NP_759721.1| 30S ribosomal protein S13 [Vibrio vulnificus CMCP6] gi|37678580|ref|NP_933189.1| 30S ribosomal protein S13 [Vibrio vulnificus YJ016] gi|320157579|ref|YP_004189958.1| 30S ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O] gi|32363317|sp|Q8DE61|RS13_VIBVU RecName: Full=30S ribosomal protein S13 gi|71153726|sp|Q7MPG7|RS13_VIBVY RecName: Full=30S ribosomal protein S13 gi|27360311|gb|AAO09248.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus CMCP6] gi|37197320|dbj|BAC93160.1| ribosomal protein S13 [Vibrio vulnificus YJ016] gi|319932891|gb|ADV87755.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O] Length = 118 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|295109499|emb|CBL23452.1| 30S ribosomal protein S13 [Ruminococcus obeum A2-162] Length = 122 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + +V +I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRASADKILAQAGVNPDIRVRDLTDDDVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|86739320|ref|YP_479720.1| 30S ribosomal protein S13 [Frankia sp. CcI3] gi|123724242|sp|Q2JFF1|RS13_FRASC RecName: Full=30S ribosomal protein S13 gi|86566182|gb|ABD09991.1| SSU ribosomal protein S13P [Frankia sp. CcI3] Length = 126 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S+D A+ P+ RV L E E++++R I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATAVNPDTRVRDLSEEEIVRLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|50364963|ref|YP_053388.1| 30S ribosomal protein S13 [Mesoplasma florum L1] gi|81391972|sp|Q6F1W9|RS13_MESFL RecName: Full=30S ribosomal protein S13 gi|50363519|gb|AAT75504.1| 30S ribosomal protein S13 [Mesoplasma florum L1] Length = 121 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG +SQ + +KL I + R L E ++ I I Sbjct: 1 MARISGVEIPNEKRVVISLTYIYGIGLSTSQKVLSKLNISEDVRTRDLTEEQIKAISTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEG+LRR V++NIKRLM++GCYRGLRHR+GLPVRGQ + TNART K Sbjct: 61 -SNFKVEGELRREVSLNIKRLMEIGCYRGLRHRKGLPVRGQSSKTNARTVK 110 >gi|205372044|ref|ZP_03224861.1| 30S ribosomal protein S13 [Bacillus coahuilensis m4-4] Length = 127 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+G+G ++Q I + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGVGKNTAQKILAEAGVSEDTRVRDLTEEELGKIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +++NIKRLM++G +RG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DT-YKVEGDLRREISLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|37912967|gb|AAR05299.1| ribosomal protein S13 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063198|gb|AAR38035.1| ribosomal protein S13 [uncultured marine bacterium 562] Length = 119 Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L +I GIG K++QDIC +L I R++ L E EV +R AI Sbjct: 1 MARIAGVNIPENKHVEISLTHIFGIGRKTAQDICKELKIDYTRKISDLTEDEVENLRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++ NIKRLMDLG YRG+RHRR LP RGQ T NARTRK Sbjct: 61 GK-FVVEGDLRRNISTNIKRLMDLGSYRGIRHRRKLPTRGQNTKNNARTRK 110 >gi|157804013|ref|YP_001492562.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel] gi|157785276|gb|ABV73777.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel] Length = 145 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIA VN+P KR+V +L YI+G+G + +IC+K I +++V +L + E+I +R I Sbjct: 21 VARIASVNVPDNKRLVVSLTYIYGLGPTMAAEICSKAKISKDKKVKELTDQELISLRNII 80 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK Sbjct: 81 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 131 >gi|206895241|ref|YP_002247310.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM 5265] gi|226712721|sp|B5Y963|RS13_COPPD RecName: Full=30S ribosomal protein S13 gi|206737858|gb|ACI16936.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM 5265] Length = 124 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P KR+V AL I+GIG +++DIC L I P +++ +L ++ ++ I Sbjct: 1 MARIVGVELPDNKRIVFALPRIYGIGKSTAEDICEALGIDPMQKLGELTPEQINTLQDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEGDLRR VAMNIKRLMD+ CYRG+RH+RGLPVRGQRT NARTRK Sbjct: 61 TAHYKVEGDLRREVAMNIKRLMDIKCYRGIRHQRGLPVRGQRTRHNARTRK 111 >gi|15594845|ref|NP_212634.1| 30S ribosomal protein S13 [Borrelia burgdorferi B31] gi|195941637|ref|ZP_03087019.1| 30S ribosomal protein S13 [Borrelia burgdorferi 80a] gi|216264479|ref|ZP_03436471.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a] gi|218249265|ref|YP_002375010.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7] gi|223888816|ref|ZP_03623407.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b] gi|226320981|ref|ZP_03796526.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805] gi|226321810|ref|ZP_03797336.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26] gi|3914889|sp|O51453|RS13_BORBU RecName: Full=30S ribosomal protein S13 gi|226712698|sp|B7J265|RS13_BORBZ RecName: Full=30S ribosomal protein S13 gi|2688391|gb|AAC66842.1| ribosomal protein S13 (rpsM) [Borrelia burgdorferi B31] gi|215980952|gb|EEC21759.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a] gi|218164453|gb|ACK74514.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7] gi|223885632|gb|EEF56731.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b] gi|226232999|gb|EEH31752.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26] gi|226233582|gb|EEH32318.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805] gi|312149489|gb|ADQ29560.1| ribosomal protein S13p/S18e [Borrelia burgdorferi N40] Length = 125 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYIVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|253995741|ref|YP_003047805.1| 30S ribosomal protein S13 [Methylotenera mobilis JLW8] gi|253982420|gb|ACT47278.1| ribosomal protein S13 [Methylotenera mobilis JLW8] Length = 120 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG ++Q IC + ++ L +++V ++R + Sbjct: 1 MARIAGVNIPNNKHTEIALTAIYGIGRNTAQKICVAAGVLATAKIKDLNDADVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YKVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|70732862|ref|YP_262629.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf-5] gi|330812054|ref|YP_004356516.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|91207717|sp|Q4K554|RS13_PSEF5 RecName: Full=30S ribosomal protein S13 gi|68347161|gb|AAY94767.1| ribosomal protein S13p/S18e [Pseudomonas fluorescens Pf-5] gi|327380162|gb|AEA71512.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 118 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVTGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|227549865|ref|ZP_03979914.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291] gi|227078120|gb|EEI16083.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291] Length = 122 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGATRSKELLEKTGISPDLRTDNLTDDQLAALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ESSYTVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|83748172|ref|ZP_00945199.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551] gi|207721874|ref|YP_002252312.1| 30S ribosomal protein S13 [Ralstonia solanacearum MolK2] gi|207744553|ref|YP_002260945.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609] gi|300702803|ref|YP_003744404.1| 30S ribosomal protein S13 [Ralstonia solanacearum CFBP2957] gi|83725140|gb|EAP72291.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551] gi|206587042|emb|CAQ17626.1| 30s ribosomal protein s13 [Ralstonia solanacearum MolK2] gi|206595959|emb|CAQ62886.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609] gi|299070465|emb|CBJ41760.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CFBP2957] Length = 121 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L ++GIG ++ IC +P ++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAVYGIGRSRARKICEVTGVPTNKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 NK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|317049818|ref|YP_004117466.1| 30S ribosomal protein S13 [Pantoea sp. At-9b] gi|316951435|gb|ADU70910.1| 30S ribosomal protein S13 [Pantoea sp. At-9b] Length = 118 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC + I ++ +L E ++ Q+R A+ Sbjct: 1 MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|238922854|ref|YP_002936367.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656] gi|259494677|sp|C4ZBU3|RS13_EUBR3 RecName: Full=30S ribosomal protein S13 gi|238874526|gb|ACR74233.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656] gi|291523754|emb|CBK89341.1| 30S ribosomal protein S13 [Eubacterium rectale DSM 17629] gi|291528780|emb|CBK94366.1| 30S ribosomal protein S13 [Eubacterium rectale M104/1] Length = 122 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L + EV +I I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILEAANVDPSTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|323357348|ref|YP_004223744.1| ribosomal protein S13 [Microbacterium testaceum StLB037] gi|323273719|dbj|BAJ73864.1| ribosomal protein S13 [Microbacterium testaceum StLB037] Length = 124 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV AL YI+G+G S +I N I + RV L + +++ +R I Sbjct: 1 MARLAGVDIPRDKRVVIALTYIYGVGRTRSVEILNATGISQDVRVKDLTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|290477171|ref|YP_003470086.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004] gi|289176519|emb|CBJ83328.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004] Length = 118 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQQICEAACIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|164686551|ref|ZP_02210579.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM 16795] gi|164604420|gb|EDQ97885.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM 16795] Length = 123 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR L YI+GIG ++ +I K I P+ R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPNEKRAEIGLTYIYGIGRATANEILAKAEINPDTRIKDLSEEEVNTLRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK Sbjct: 61 DNDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRK 111 >gi|157377429|ref|YP_001476029.1| 30S ribosomal protein S13 [Shewanella sediminis HAW-EB3] gi|189044297|sp|A8G1C8|RS13_SHESH RecName: Full=30S ribosomal protein S13 gi|157319803|gb|ABV38901.1| ribosomal protein S13 [Shewanella sediminis HAW-EB3] Length = 118 Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDQKHTVIALTGIFGIGRTRARAICATTSIAEDAKIKELSEAQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|292492443|ref|YP_003527882.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4] gi|291581038|gb|ADE15495.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4] Length = 118 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G ++ IC + +++V L +SE+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALTSIYGVGPTRAKKICEAAGVASDKKVKDLSDSELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YPVEGDLRREISMDIKRLMDLGCYRGLRHRRGLPVRGQRTQTNARTRK 110 >gi|42524355|ref|NP_969735.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100] gi|81616519|sp|Q6MJ33|RS13_BDEBA RecName: Full=30S ribosomal protein S13 gi|39576564|emb|CAE80728.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100] Length = 124 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI+GIG + IC ++ IP E R L + + +IR + Sbjct: 1 MARILGVDLPRNKRVEIALTYIYGIGRPRAAMICKQVGIPSELRTEGLTDEHIAKIRSIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR + +IKRLMDL C+RG+RHR+GLPVRGQ T +NARTRK Sbjct: 61 EANFKVEGDLRREIGQSIKRLMDLNCFRGIRHRKGLPVRGQNTRSNARTRK 111 >gi|325972639|ref|YP_004248830.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy] gi|324027877|gb|ADY14636.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy] Length = 121 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ +IC K I P+ ++ L ++ +R+ I Sbjct: 1 MARIAGVDLPN-KAVKIALTYIYGIGRFSAVEICEKTNINPDTNINTLSSEDLAVLRKVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E++Y+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPV GQRT TNARTR Sbjct: 60 EEEYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVHGQRTKTNARTR 109 >gi|295425629|ref|ZP_06818316.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664] gi|295064645|gb|EFG55566.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664] Length = 116 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVVALTYIYGIGEPTAKKICKDAGVSEDIRSKDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+GCYRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGCYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|291535453|emb|CBL08565.1| 30S ribosomal protein S13 [Roseburia intestinalis M50/1] Length = 122 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|229524555|ref|ZP_04413960.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis VL426] gi|229338136|gb|EEO03153.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis VL426] Length = 118 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I L I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|291619153|ref|YP_003521895.1| RpsM [Pantoea ananatis LMG 20103] gi|304399268|ref|ZP_07381134.1| 30S ribosomal protein S13 [Pantoea sp. aB] gi|308188334|ref|YP_003932465.1| 30S ribosomal protein S13 [Pantoea vagans C9-1] gi|291154183|gb|ADD78767.1| RpsM [Pantoea ananatis LMG 20103] gi|304353194|gb|EFM17575.1| 30S ribosomal protein S13 [Pantoea sp. aB] gi|308058844|gb|ADO11016.1| 30S ribosomal protein S13 [Pantoea vagans C9-1] gi|327395482|dbj|BAK12904.1| 30S ribosomal protein S13 RpsM [Pantoea ananatis AJ13355] Length = 118 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC I ++ +L E ++ Q+R A+ Sbjct: 1 MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICASTGIAENVKISELSEEQIDQLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|260655359|ref|ZP_05860847.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1] gi|260629807|gb|EEX48001.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1] Length = 123 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 64/109 (58%), Positives = 79/109 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S+ I + P+ RV L E E ++R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGVATSRKILETTGVNPDTRVKDLTEEEEQKLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR MNIKRL+D+GCYRGLRH++GLPVRGQRT TNART Sbjct: 61 VNNHTVEGDLRRERTMNIKRLVDIGCYRGLRHKQGLPVRGQRTKTNART 109 >gi|325261518|ref|ZP_08128256.1| 30S ribosomal protein S13 [Clostridium sp. D5] gi|324032972|gb|EGB94249.1| 30S ribosomal protein S13 [Clostridium sp. D5] Length = 127 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/109 (57%), Positives = 79/109 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ RV L EV +I + I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILTEAGVNPDTRVRDLTSEEVKKISEVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 EQ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 66 EQSQTVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114 >gi|260772118|ref|ZP_05881035.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14] gi|260612985|gb|EEX38187.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14] Length = 118 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|73913588|gb|AAZ91709.1| 30S Ribosomal protein S13 [Corynebacterium stationis] Length = 122 Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EASWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|229074196|ref|ZP_04207242.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18] gi|229094857|ref|ZP_04225862.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29] gi|229100934|ref|ZP_04231738.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28] gi|229113811|ref|ZP_04243246.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3] gi|228669682|gb|EEL25089.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3] gi|228682513|gb|EEL36586.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28] gi|228688600|gb|EEL42473.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29] gi|228708966|gb|EEL61093.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18] Length = 121 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|58699348|ref|ZP_00374121.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila ananassae] gi|58534134|gb|EAL58360.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila ananassae] Length = 122 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL YI+GIG ++ IC+ + +RV +L + ++ +I I Sbjct: 1 MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK Sbjct: 61 RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111 >gi|226323037|ref|ZP_03798555.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758] gi|225208604|gb|EEG90958.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758] Length = 135 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + EV +I I Sbjct: 14 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAEAGVNPDTRCRDLTDDEVKKISAVI 73 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 74 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 124 >gi|291460742|ref|ZP_06600132.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416701|gb|EFE90420.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str. F0262] Length = 122 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + EV I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRSSADKILRESKVNPDTRVKDLTDDEVKAIANYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 AENQMVEGDLRRETALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|218895270|ref|YP_002443681.1| ribosomal protein S13 [Bacillus cereus G9842] gi|228898888|ref|ZP_04063170.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222] gi|228905932|ref|ZP_04069829.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200] gi|228937438|ref|ZP_04100084.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963235|ref|ZP_04124404.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto str. T04001] gi|228970324|ref|ZP_04130983.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976894|ref|ZP_04137306.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407] gi|226712692|sp|B7IT44|RS13_BACC2 RecName: Full=30S ribosomal protein S13 gi|218543072|gb|ACK95466.1| ribosomal protein S13 [Bacillus cereus G9842] gi|228782864|gb|EEM31030.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407] gi|228789433|gb|EEM37353.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796493|gb|EEM43932.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto str. T04001] gi|228822271|gb|EEM68253.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853747|gb|EEM98507.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200] gi|228860788|gb|EEN05166.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222] gi|326937930|gb|AEA13826.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar chinensis CT-43] Length = 121 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|239905881|ref|YP_002952620.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1] gi|259494674|sp|C4XLK0|RS13_DESMR RecName: Full=30S ribosomal protein S13 gi|239795745|dbj|BAH74734.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1] Length = 123 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI GIG ++ I + + L E IR+ + Sbjct: 1 MARIAGVDLPKNKRMDIALTYIFGIGRTTALRILESTGVDWTKNSDALTSEETNNIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR + IKRLMD+GCYRGLRHRRGLP RGQRTHTN+RTRK +G +A+ Sbjct: 61 EANYKVEGDLRREITAGIKRLMDIGCYRGLRHRRGLPCRGQRTHTNSRTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257413860|ref|ZP_04744453.2| 30S ribosomal protein S13 [Roseburia intestinalis L1-82] gi|257202000|gb|EEV00285.1| 30S ribosomal protein S13 [Roseburia intestinalis L1-82] gi|291537906|emb|CBL11017.1| 30S ribosomal protein S13 [Roseburia intestinalis XB6B4] Length = 128 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +I I Sbjct: 7 MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 67 DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 117 >gi|302877824|ref|YP_003846388.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2] gi|302580613|gb|ADL54624.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2] Length = 121 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V AL I+GIG SQ IC + P ++ L ++EV ++R+ + Sbjct: 1 MARIAGVNIPNHQHAVIALTAIYGIGRVRSQGICAAAGVTPSVKMKDLTDAEVEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPCRGQRTRTNARTRK 110 >gi|149926589|ref|ZP_01914849.1| ribosomal protein S13 [Limnobacter sp. MED105] gi|149824518|gb|EDM83734.1| ribosomal protein S13 [Limnobacter sp. MED105] Length = 121 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + V L I GIG +++ IC +IP ++V L ++++ ++R + Sbjct: 1 MARIAGINIPSHQHTVIGLTAIFGIGRSTAKKICAVTSIPESKKVKDLDDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TN+RTRK + G+A Sbjct: 61 GK-YLTEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNSRTRKGPKRAGIAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|168334326|ref|ZP_02692513.1| 30S ribosomal protein S13 [Epulopiscium sp. 'N.t. morphotype B'] Length = 122 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG SS+ I + I + RV L + + +IR I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIYGIGRPSSRKILEAVGIDFDTRVKDLTDEQADKIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 EKTMMVEGDLRREVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111 >gi|90020628|ref|YP_526455.1| 30S ribosomal protein S13 [Saccharophagus degradans 2-40] gi|122996430|sp|Q21M36|RS13_SACD2 RecName: Full=30S ribosomal protein S13 gi|89950228|gb|ABD80243.1| SSU ribosomal protein S13P [Saccharophagus degradans 2-40] Length = 118 Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG ++ IC+ + ++ L E +V IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVYGIGRTKAKQICSAAGVAESTKIGDLSEEQVDTIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRNLPVRGQRSKTNARTRK 110 >gi|283853176|ref|ZP_06370429.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B] gi|283571434|gb|EFC19441.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B] Length = 123 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG ++ I + + L E IR+ I Sbjct: 1 MARIAGVDLPKNKRMDIALTYIYGIGRTTALRILEVTGVDWTKNSDALSPEETNTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V NIKRLMD+GC+RGLRHRRGLP RGQRTHTNARTRK +G +A+ Sbjct: 61 EANHKVEGDLRRDVTANIKRLMDIGCFRGLRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254458644|ref|ZP_05072068.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1] gi|207084410|gb|EDZ61698.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1] Length = 120 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KRV L YI+GIG +S+ I + I +RV +L E++V I I Sbjct: 1 MARISGVDLPKKKRVEYGLTYIYGIGLHASRLILDATGIDYNKRVFELNEADVAAITAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK Sbjct: 61 RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111 >gi|323483275|ref|ZP_08088665.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum WAL-14163] gi|323691226|ref|ZP_08105502.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673] gi|323403373|gb|EGA95681.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum WAL-14163] gi|323504745|gb|EGB20531.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673] Length = 122 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSTRILAEAGVNPDTRVKDLTDDEVKRIAGVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 AESQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111 >gi|146308901|ref|YP_001189366.1| 30S ribosomal protein S13 [Pseudomonas mendocina ymp] gi|330505185|ref|YP_004382054.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01] gi|166231916|sp|A4XZ68|RS13_PSEMY RecName: Full=30S ribosomal protein S13 gi|145577102|gb|ABP86634.1| SSU ribosomal protein S13P [Pseudomonas mendocina ymp] gi|310941841|dbj|BAJ24274.1| 30S ribosomal protein S13 [Pseudomonas mendocina] gi|328919471|gb|AEB60302.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01] Length = 118 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAATGVNPAAKIKDLTDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|225571579|ref|ZP_03780575.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM 15053] gi|225159656|gb|EEG72275.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM 15053] Length = 170 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I ++ + P+ R L + +V +I I Sbjct: 49 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILSEAGVSPDIRCRDLTDEDVKKISAVI 108 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 109 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 159 >gi|292489827|ref|YP_003532717.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430] gi|292900869|ref|YP_003540238.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC 49946] gi|291200717|emb|CBJ47850.1| 30S ribosomal subunit protein S13 [Erwinia amylovora ATCC 49946] gi|291555264|emb|CBA23545.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430] gi|312174009|emb|CBX82262.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC BAA-2158] Length = 118 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|216263668|ref|ZP_03435663.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1] gi|215980512|gb|EEC21333.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1] Length = 125 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|296119327|ref|ZP_06837895.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306] gi|295967719|gb|EFG80976.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306] Length = 122 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EASFKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|295401895|ref|ZP_06811858.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius C56-YS93] gi|312109286|ref|YP_003987602.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1] gi|294976025|gb|EFG51640.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius C56-YS93] gi|311214387|gb|ADP72991.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1] Length = 121 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 SR-LKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|153812442|ref|ZP_01965110.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174] gi|149831367|gb|EDM86455.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174] Length = 194 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + +V +I I Sbjct: 73 MARIAGVDLPRDKRIEIGLTYIYGIGRTSADKILAQAGVNPDIRVRDLTDDDVKKISAVI 132 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 133 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 183 >gi|300721388|ref|YP_003710659.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC 19061] gi|297627876|emb|CBJ88422.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC 19061] Length = 118 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAENVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|310941691|dbj|BAJ24199.1| 30S ribosomal protein S13 [Pseudomonas alcaligenes] Length = 118 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-LTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|299820979|ref|ZP_07052868.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601] gi|299818000|gb|EFI85235.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601] Length = 121 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + PE R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKTTAEKVLAEAGVSPETRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261417632|ref|YP_003251314.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61] gi|319765290|ref|YP_004130791.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52] gi|261374089|gb|ACX76832.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61] gi|317110156|gb|ADU92648.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52] Length = 121 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 -GCLKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|226942800|ref|YP_002797873.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ] gi|259494667|sp|C1DKN5|RS13_AZOVD RecName: Full=30S ribosomal protein S13 gi|226717727|gb|ACO76898.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ] Length = 118 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQAICAATGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-LTTEGDLRREVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|15925216|ref|NP_372750.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50] gi|15927806|ref|NP_375339.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus N315] gi|21283874|ref|NP_646962.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2] gi|49484442|ref|YP_041666.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA252] gi|49487008|ref|YP_044229.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650810|ref|YP_187025.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus COL] gi|82751816|ref|YP_417557.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122] gi|87159948|ref|YP_494815.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196138|ref|YP_500955.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268666|ref|YP_001247609.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH9] gi|150394731|ref|YP_001317406.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1] gi|151222340|ref|YP_001333162.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980541|ref|YP_001442800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3] gi|161510430|ref|YP_001576089.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140172|ref|ZP_03564665.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316987|ref|ZP_04840200.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729892|ref|ZP_04864057.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734365|ref|ZP_04868530.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH130] gi|255007006|ref|ZP_05145607.2| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257423711|ref|ZP_05600140.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus 55/2053] gi|257426389|ref|ZP_05602791.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429029|ref|ZP_05605416.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 68-397] gi|257431675|ref|ZP_05608038.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus E1410] gi|257434635|ref|ZP_05610686.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus M876] gi|257794572|ref|ZP_05643551.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781] gi|258408826|ref|ZP_05681110.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763] gi|258422425|ref|ZP_05685337.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719] gi|258422673|ref|ZP_05685578.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635] gi|258439813|ref|ZP_05690559.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299] gi|258442631|ref|ZP_05691191.1| ribosomal protein S13 [Staphylococcus aureus A8115] gi|258446671|ref|ZP_05694826.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300] gi|258450211|ref|ZP_05698303.1| ribosomal protein S13 [Staphylococcus aureus A6224] gi|258450778|ref|ZP_05698837.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948] gi|258455417|ref|ZP_05703377.1| ribosomal protein S13 [Staphylococcus aureus A5937] gi|269203859|ref|YP_003283128.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED98] gi|282893665|ref|ZP_06301897.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117] gi|282902129|ref|ZP_06310022.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C160] gi|282906569|ref|ZP_06314417.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909539|ref|ZP_06317350.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911787|ref|ZP_06319583.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915075|ref|ZP_06322852.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M899] gi|282917571|ref|ZP_06325323.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus D139] gi|282920801|ref|ZP_06328519.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C427] gi|282922095|ref|ZP_06329791.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765] gi|282925706|ref|ZP_06333354.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C101] gi|282926772|ref|ZP_06334399.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102] gi|283767318|ref|ZP_06340233.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19] gi|283959004|ref|ZP_06376445.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus A017934/97] gi|284025252|ref|ZP_06379650.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 132] gi|293497479|ref|ZP_06665333.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 58-424] gi|293511054|ref|ZP_06669751.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus M809] gi|293549660|ref|ZP_06672332.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M1015] gi|294848759|ref|ZP_06789504.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754] gi|295404902|ref|ZP_06814715.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819] gi|295428809|ref|ZP_06821433.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275983|ref|ZP_06858490.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MR1] gi|297209961|ref|ZP_06926357.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297243960|ref|ZP_06927850.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796] gi|297589705|ref|ZP_06948346.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8] gi|300910973|ref|ZP_07128423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH70] gi|304379410|ref|ZP_07362145.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039351|sp|P66388|RS13_STAAN RecName: Full=30S ribosomal protein S13 gi|54039352|sp|P66389|RS13_STAAW RecName: Full=30S ribosomal protein S13 gi|54042123|sp|P66387|RS13_STAAM RecName: Full=30S ribosomal protein S13 gi|56749504|sp|Q6G795|RS13_STAAS RecName: Full=30S ribosomal protein S13 gi|56749551|sp|Q6GEK7|RS13_STAAR RecName: Full=30S ribosomal protein S13 gi|81693973|sp|Q5HDY2|RS13_STAAC RecName: Full=30S ribosomal protein S13 gi|91207727|sp|Q2YYM0|RS13_STAAB RecName: Full=30S ribosomal protein S13 gi|122538866|sp|Q2FW30|RS13_STAA8 RecName: Full=30S ribosomal protein S13 gi|123484808|sp|Q2FER3|RS13_STAA3 RecName: Full=30S ribosomal protein S13 gi|166231927|sp|A7X5C7|RS13_STAA1 RecName: Full=30S ribosomal protein S13 gi|172049007|sp|A6QJ68|RS13_STAAE RecName: Full=30S ribosomal protein S13 gi|189044299|sp|A6U3V1|RS13_STAA2 RecName: Full=30S ribosomal protein S13 gi|189044300|sp|A5IV10|RS13_STAA9 RecName: Full=30S ribosomal protein S13 gi|189044301|sp|A8Z333|RS13_STAAT RecName: Full=30S ribosomal protein S13 gi|13702026|dbj|BAB43318.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus N315] gi|14247999|dbj|BAB58388.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50] gi|21205316|dbj|BAB96010.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2] gi|49242571|emb|CAG41292.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA252] gi|49245451|emb|CAG43928.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284996|gb|AAW37090.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus COL] gi|82657347|emb|CAI81788.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122] gi|87125922|gb|ABD20436.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203696|gb|ABD31506.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741735|gb|ABQ50033.1| SSU ribosomal protein S13P [Staphylococcus aureus subsp. aureus JH9] gi|149947183|gb|ABR53119.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1] gi|150375140|dbj|BAF68400.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722676|dbj|BAF79093.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3] gi|160369239|gb|ABX30210.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726339|gb|EES95068.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727682|gb|EES96411.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH130] gi|257272729|gb|EEV04831.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus 55/2053] gi|257276020|gb|EEV07471.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279510|gb|EEV10097.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 68-397] gi|257282554|gb|EEV12686.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus E1410] gi|257285231|gb|EEV15347.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus M876] gi|257788544|gb|EEV26884.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781] gi|257840509|gb|EEV64969.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763] gi|257841856|gb|EEV66293.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719] gi|257847084|gb|EEV71093.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635] gi|257847589|gb|EEV71591.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299] gi|257851752|gb|EEV75686.1| ribosomal protein S13 [Staphylococcus aureus A8115] gi|257854739|gb|EEV77687.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300] gi|257856303|gb|EEV79212.1| ribosomal protein S13 [Staphylococcus aureus A6224] gi|257861561|gb|EEV84363.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948] gi|257862628|gb|EEV85396.1| ribosomal protein S13 [Staphylococcus aureus A5937] gi|262076149|gb|ACY12122.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED98] gi|269941815|emb|CBI50225.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TW20] gi|282312535|gb|EFB42939.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C101] gi|282315216|gb|EFB45600.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C427] gi|282318533|gb|EFB48891.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus D139] gi|282320796|gb|EFB51130.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M899] gi|282323483|gb|EFB53799.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326518|gb|EFB56820.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329468|gb|EFB58989.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Btn1260] gi|282591223|gb|EFB96296.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102] gi|282593563|gb|EFB98556.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765] gi|282596588|gb|EFC01547.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C160] gi|282763723|gb|EFC03851.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117] gi|283461197|gb|EFC08281.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19] gi|283471448|emb|CAQ50659.1| ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus ST398] gi|283788596|gb|EFC27423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus A017934/97] gi|285817888|gb|ADC38375.1| 30S ribosomal protein S13 [Staphylococcus aureus 04-02981] gi|290918707|gb|EFD95783.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M1015] gi|291096410|gb|EFE26668.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 58-424] gi|291466041|gb|EFF08570.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus M809] gi|294824138|gb|EFG40562.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754] gi|294969847|gb|EFG45865.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819] gi|295127158|gb|EFG56800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885634|gb|EFH24571.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178738|gb|EFH37983.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796] gi|297578216|gb|EFH96929.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8] gi|298695483|gb|ADI98705.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED133] gi|300887953|gb|EFK83148.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH70] gi|302333862|gb|ADL24055.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JKD6159] gi|302752099|gb|ADL66276.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341942|gb|EFM07846.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437363|gb|ADQ76434.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH60] gi|312830575|emb|CBX35417.1| 30S ribosomal protein S13 (BS14) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129694|gb|EFT85685.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS03] gi|315193478|gb|EFU23874.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS00] gi|315198244|gb|EFU28575.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS01] gi|320140236|gb|EFW32095.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143506|gb|EFW35287.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA177] gi|323440094|gb|EGA97809.1| 30S ribosomal protein S13 [Staphylococcus aureus O11] gi|323442768|gb|EGB00394.1| 30S ribosomal protein S13 [Staphylococcus aureus O46] gi|329314909|gb|AEB89322.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus T0131] gi|329723637|gb|EGG60166.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21172] gi|329730351|gb|EGG66741.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21193] gi|329732010|gb|EGG68365.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21189] Length = 121 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DG-YKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|326792581|ref|YP_004310402.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427] gi|326543345|gb|ADZ85204.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427] Length = 123 Score = 129 bits (325), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI GIG +S+ I + I + R+ L E +V +IR+ I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIFGIGRPTSRQILTEAGIDFDTRIKDLTEEQVSKIRELI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR +A+NIKRLM++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 EKLGIIVEGDLRREIALNIKRLMEIGCYRGIRHRRGLPVRGQKTKTNARTRK 112 >gi|229170986|ref|ZP_04298587.1| 30S ribosomal protein S13 [Bacillus cereus MM3] gi|228612526|gb|EEK69747.1| 30S ribosomal protein S13 [Bacillus cereus MM3] Length = 121 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|307720210|ref|YP_003891350.1| 30S ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294] gi|306978303|gb|ADN08338.1| SSU ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294] Length = 120 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L YI+GIG +++ I + I +RV +L E +V I + I Sbjct: 1 MARISGVDLPKKKRIEYGLTYIYGIGLHTARQILDATGIDYNKRVFELNEEDVAAITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK Sbjct: 61 RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111 >gi|295396441|ref|ZP_06806603.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030] gi|294970743|gb|EFG46656.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030] Length = 122 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G + + + P+ RV L + E++Q+R I Sbjct: 1 MARLAGVDLPREKRVEVALTYIYGVGRTRASQTLTETGVNPDTRVKDLTDDELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTFKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|229015536|ref|ZP_04172533.1| 30S ribosomal protein S13 [Bacillus cereus AH1273] gi|229021746|ref|ZP_04178327.1| 30S ribosomal protein S13 [Bacillus cereus AH1272] gi|229027983|ref|ZP_04184136.1| 30S ribosomal protein S13 [Bacillus cereus AH1271] gi|229159308|ref|ZP_04287332.1| 30S ribosomal protein S13 [Bacillus cereus R309803] gi|228624200|gb|EEK81002.1| 30S ribosomal protein S13 [Bacillus cereus R309803] gi|228733371|gb|EEL84200.1| 30S ribosomal protein S13 [Bacillus cereus AH1271] gi|228739555|gb|EEL89970.1| 30S ribosomal protein S13 [Bacillus cereus AH1272] gi|228745759|gb|EEL95764.1| 30S ribosomal protein S13 [Bacillus cereus AH1273] Length = 121 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|301168434|emb|CBW28024.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ] Length = 127 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/121 (54%), Positives = 82/121 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IPR K V AL I+G+G K ++++ K I + + L E E IR + Sbjct: 1 MARILGVDIPRNKVVTVALRSIYGVGPKVAEEVLTKAGIDLNKNSNDLTEEEANNIRLLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR + +NIKRL DLGCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 EGEYTVEGDLRRQIGLNIKRLKDLGCYRGIRHRKGLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|150020870|ref|YP_001306224.1| 30S ribosomal protein S13 [Thermosipho melanesiensis BI429] gi|166231928|sp|A6LLN8|RS13_THEM4 RecName: Full=30S ribosomal protein S13 gi|149793391|gb|ABR30839.1| ribosomal protein S13 [Thermosipho melanesiensis BI429] Length = 122 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL YI+GIG ++ IC I P +RV +L + E+ +I I Sbjct: 1 MARIVGVEIPNDKKVEIALTYIYGIGKTRAKQICEATNIDPNKRVRELGDEEISKIATFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+Y+VEG+LR V NIKRL+D+GCYRGLRH+ GLPVRGQ+T +NARTRK Sbjct: 61 QQNYKVEGELRTEVMQNIKRLIDIGCYRGLRHKLGLPVRGQKTKSNARTRK 111 >gi|284006141|emb|CBA71383.1| 30S ribosomal protein S13 [Arsenophonus nasoniae] Length = 118 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQSICAASGIAEHVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YIVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|239918175|ref|YP_002957733.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] gi|259494685|sp|C5CC38|RS13_MICLC RecName: Full=30S ribosomal protein S13 gi|239839382|gb|ACS31179.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] Length = 122 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ I P RV L +++Q+R I Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|320108371|ref|YP_004183961.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4] gi|319926892|gb|ADV83967.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4] Length = 126 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+ AL YI GIG + I K I P R++ L E E+ +IRQ I Sbjct: 1 MARIAGVDLPNNKQAKIALTYIFGIGDPRALSILKKADIDPIRKMQTLDEDELNKIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EAEGGIEGDLRKDISLNIKRLIEIQSYRGLRHRRNLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260886900|ref|ZP_05898163.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|330839302|ref|YP_004413882.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|260863499|gb|EEX77999.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|329747066|gb|AEC00423.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] Length = 124 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +SQ + + P+ R L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTTSQKLLKLAGVNPDTRTRDLTEDEVVKLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR M IKRL+D+GCYRG RHR GLPVRGQ T NARTRK Sbjct: 61 DKEAIVEGDLRRERQMAIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRK 111 >gi|254483422|ref|ZP_05096651.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148] gi|214036296|gb|EEB76974.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148] Length = 118 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G +++++C + R+ +L E+E+ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAKELCAATGVTESTRIGELSETEMDALRGKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 -AEMMVEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRK 110 >gi|167759836|ref|ZP_02431963.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704] gi|167662455|gb|EDS06585.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704] Length = 122 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDEDVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|291518022|emb|CBK73243.1| 30S ribosomal protein S13 [Butyrivibrio fibrisolvens 16/4] Length = 122 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS + + P RV L + EV +I I Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGRVSSNKVLEAAGVDPNTRVKDLTDEEVKKISTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEG+LRR VA++IKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DETLTVEGNLRREVALDIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|192360555|ref|YP_001981230.1| 30S ribosomal protein S13 [Cellvibrio japonicus Ueda107] gi|226712710|sp|B3PK59|RS13_CELJU RecName: Full=30S ribosomal protein S13 gi|190686720|gb|ACE84398.1| ribosomal protein S13p/S18e [Cellvibrio japonicus Ueda107] Length = 118 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG +++ IC I + ++ L E ++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYVYGIGRTTAKQICAATGIAEDTKIGTLSEEQMDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-HTVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRK 110 >gi|254468398|ref|ZP_05081804.1| ribosomal protein S13p/S18e [beta proteobacterium KB13] gi|207087208|gb|EDZ64491.1| ribosomal protein S13p/S18e [beta proteobacterium KB13] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K AL I+GIG ++Q+IC + + ++ L ++ V ++R I Sbjct: 1 MARIAGVNVPDNKHADIALTAIYGIGRTTAQNICKSVGVDAATKIKDLDDAAVEKLRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + YQ+EGDLRR V MNIKRLMDL CYRG RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YQIEGDLRREVTMNIKRLMDLNCYRGQRHRRGLPVRGQRTKTNARTRK 110 >gi|169630852|ref|YP_001704501.1| 30S ribosomal protein S13 [Mycobacterium abscessus ATCC 19977] gi|226712765|sp|B1MGA2|RS13_MYCA9 RecName: Full=30S ribosomal protein S13 gi|169242819|emb|CAM63847.1| 30S ribosomal protein S13 [Mycobacterium abscessus] Length = 124 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S++I I PE+R L + +V Q+R+ I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSKEILAATGISPEQRSKDLTDDQVTQLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|291521875|emb|CBK80168.1| 30S ribosomal protein S13 [Coprococcus catus GD/7] Length = 123 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG +S + + + P+ RV L + EV +IR AI Sbjct: 1 MARISGVDLPRDKRIEIGLTYVYGIGRATSNRLLKEAGVNPDTRVRDLTDEEVGKIRDAI 60 Query: 61 EQDY-QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D +EGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 DADSILIEGDLRREIAINIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 112 >gi|269104034|ref|ZP_06156731.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163932|gb|EEZ42428.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|225376435|ref|ZP_03753656.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM 16841] gi|225211811|gb|EEG94165.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM 16841] Length = 128 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P R L + EV +I + I Sbjct: 7 MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILAEANVDPNTRCRDLTDDEVKRISEVI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 67 DNTQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 117 >gi|302388062|ref|YP_003823884.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1] gi|302198690|gb|ADL06261.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1] Length = 122 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 GDSQIVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111 >gi|56961957|ref|YP_173679.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16] gi|81367460|sp|Q5WLN7|RS13_BACSK RecName: Full=30S ribosomal protein S13 gi|56908191|dbj|BAD62718.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16] Length = 121 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L Y+ GIG ++ I + RV L E E+ +IR+A+ Sbjct: 1 MARVAGVDIPRDKRVVISLTYVFGIGKSTAAKILETAGVDENTRVRDLTEEELGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E YQVEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 E-GYQVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|257064665|ref|YP_003144337.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476] gi|256792318|gb|ACV22988.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476] Length = 123 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ L YI+GIG +++ I + + P+ RV + E ++ +IR I Sbjct: 1 MPRLFGVDLPRDKRIETGLTYIYGIGNTTAKKIIAETGVDPDVRVRDISEEDLQKIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DANLTVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111 >gi|254422356|ref|ZP_05036074.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335] gi|196189845|gb|EDX84809.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335] Length = 126 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/101 (59%), Positives = 76/101 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+G+G SQ+I K + P RV L +++VI++R+ + Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGVGLSRSQEILEKTGVDPNIRVKDLADADVIKLRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E DY +EGDLRR V MNIKRLMD+GCYRG RHR GLPVRGQ Sbjct: 61 EGDYLIEGDLRRQVNMNIKRLMDIGCYRGRRHRMGLPVRGQ 101 >gi|197294606|ref|YP_001799147.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense] gi|226712773|sp|B1VAC3|RS13_PHYAS RecName: Full=30S ribosomal protein S13 gi|171853933|emb|CAM11896.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense] Length = 121 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K SQ I N+L I + RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGKKLSQKILNELNISHDIRVKNLTEQQLSSLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K Sbjct: 61 TK-YSVEGDLRREVTLNIKRLMEIGVYRGLRHRKGLPVRGQKTRNNAHTVK 110 >gi|242237881|ref|YP_002986062.1| 30S ribosomal protein S13 [Dickeya dadantii Ech703] gi|242129938|gb|ACS84240.1| ribosomal protein S13 [Dickeya dadantii Ech703] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ IC I + ++ +L E ++ +R+ + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAICAAAGIAEDVKISELSEEQIETLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|229823513|ref|ZP_04449582.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271] gi|229786957|gb|EEP23071.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271] Length = 120 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG K++Q + + + + RV L E+ +IR+ I Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGLKTAQQVLKQANVSEDTRVKDLSNDELDRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR +++NIKRL ++G YRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 D-GLKVEGDLRREISLNIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|298243944|ref|ZP_06967751.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963] gi|297556998|gb|EFH90862.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963] Length = 126 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/101 (61%), Positives = 78/101 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +LCYI+GIG +SQ I K I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDIPREKRVEISLCYIYGIGLTTSQKILEKTRINPDTRVKDLTEEEVNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++++VEGDLRR + NIKRL+D+GCYRGLRHRR LPV GQ Sbjct: 61 DREHKVEGDLRREIQTNIKRLIDIGCYRGLRHRRNLPVHGQ 101 >gi|118595313|ref|ZP_01552660.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181] gi|118441091|gb|EAV47718.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/111 (61%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K AL I GIG ++Q IC + + ++ L ES V +IR I Sbjct: 1 MARIAGVNVPDNKHAEIALTAIFGIGKVTAQKICAAVGVSQSTKIKDLDESAVEKIRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 EK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|262203543|ref|YP_003274751.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247] gi|262086890|gb|ACY22858.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247] Length = 122 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G +S++I + P+ R L +++V ++R+ I Sbjct: 1 MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILEGTGLSPDLRAKDLTDADVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|237806897|ref|YP_002891337.1| 30S ribosomal protein S13 [Tolumonas auensis DSM 9187] gi|259494693|sp|C4L7V2|RS13_TOLAT RecName: Full=30S ribosomal protein S13 gi|237499158|gb|ACQ91751.1| ribosomal protein S13 [Tolumonas auensis DSM 9187] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G ++ IC I + +V L E+++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGDTRAKSICAAAGIAEDVKVKDLDEAQIEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|42520509|ref|NP_966424.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652512|sp|Q73HA7|RS13_WOLPM RecName: Full=30S ribosomal protein S13 gi|42410248|gb|AAS14358.1| ribosomal protein S13 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 122 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL YI+GIG ++ IC+ + +RV +L + ++ +I I Sbjct: 1 MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISGFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK Sbjct: 61 RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111 >gi|188535256|ref|YP_001909053.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99] gi|259909978|ref|YP_002650334.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96] gi|226712736|sp|B2VK74|RS13_ERWT9 RecName: Full=30S ribosomal protein S13 gi|188030298|emb|CAO98187.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99] gi|224965600|emb|CAX57132.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96] gi|283480076|emb|CAY75992.1| 30S ribosomal protein S13 [Erwinia pyrifoliae DSM 12163] gi|310765576|gb|ADP10526.1| 30S ribosomal protein S13 [Erwinia sp. Ejp617] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|126654304|ref|ZP_01726074.1| 30S ribosomal protein S13 [Bacillus sp. B14905] gi|169830007|ref|YP_001700165.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41] gi|299541956|ref|ZP_07052279.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1] gi|226712758|sp|B1HMV7|RS13_LYSSC RecName: Full=30S ribosomal protein S13 gi|126589233|gb|EAZ83396.1| 30S ribosomal protein S13 [Bacillus sp. B14905] gi|168994495|gb|ACA42035.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41] gi|298725694|gb|EFI66335.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1] Length = 121 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + I + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKTTAQKVLADAGISEDTRVRDLTEDELNKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y++EGDLRR ++NIKRLM++G +RG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-YKLEGDLRRETSLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|170723884|ref|YP_001751572.1| 30S ribosomal protein S13 [Pseudomonas putida W619] gi|226712779|sp|B1JAJ0|RS13_PSEPW RecName: Full=30S ribosomal protein S13 gi|169761887|gb|ACA75203.1| ribosomal protein S13 [Pseudomonas putida W619] gi|310941010|dbj|BAJ24379.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941040|dbj|BAJ24394.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|296394893|ref|YP_003659777.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985] gi|296182040|gb|ADG98946.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985] Length = 124 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + P+ R L ++ V Q+R+ I Sbjct: 1 MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDANVAQLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|224534712|ref|ZP_03675284.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S] gi|224513960|gb|EEF84282.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S] Length = 125 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CN+ +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLRIALTSIYGIGRTRALEVCNRASISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|170728987|ref|YP_001763013.1| 30S ribosomal protein S13 [Shewanella woodyi ATCC 51908] gi|226712786|sp|B1KMW1|RS13_SHEWM RecName: Full=30S ribosomal protein S13 gi|169814334|gb|ACA88918.1| ribosomal protein S13 [Shewanella woodyi ATCC 51908] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC ++ + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTGIFGIGRTRARAICAATSVAEDAKIKELSEAQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|325267154|ref|ZP_08133822.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394] gi|324981392|gb|EGC17036.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394] Length = 120 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG +++IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKNICEVAGIAPATKVKDLDESQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V MNIKRL+D+GCYRG+RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMNIKRLIDMGCYRGMRHRRGLPCRGQRTRTNARTRK 110 >gi|152980690|ref|YP_001355078.1| 30S ribosomal protein S13 [Janthinobacterium sp. Marseille] gi|158706240|sp|A6T3I1|RS13_JANMA RecName: Full=30S ribosomal protein S13 gi|151280767|gb|ABR89177.1| small subunit ribosomal protein S13 [Janthinobacterium sp. Marseille] Length = 121 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG SQ IC+ +P ++V L ++E+ ++R I Sbjct: 1 MARIAGVNVPNHQHTVIGLTAIYGIGRPRSQKICDTAGVPTTKKVKDLDDNELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK Sbjct: 61 AK-FIVEGDLRRELSMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRK 110 >gi|294142911|ref|YP_003558889.1| 30S ribosomal protein S13 [Shewanella violacea DSS12] gi|22257036|sp|Q9S0R1|RS13_SHEVD RecName: Full=30S ribosomal protein S13 gi|5913929|dbj|BAA84522.1| ribosomal protein S13 [Shewanella violacea] gi|293329380|dbj|BAJ04111.1| ribosomal protein S13 [Shewanella violacea DSS12] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDQKHTVIALTGIFGIGRTRARAICAATSIAEDAKIKELSEAQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|294789216|ref|ZP_06754455.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453] gi|294482957|gb|EFG30645.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453] Length = 120 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKSICEAAGIAPTTKVKDLNESQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|52426081|ref|YP_089218.1| 30S ribosomal protein S13 [Mannheimia succiniciproducens MBEL55E] gi|81386597|sp|Q65QX7|RS13_MANSM RecName: Full=30S ribosomal protein S13 gi|52308133|gb|AAU38633.1| RpsM protein [Mannheimia succiniciproducens MBEL55E] Length = 118 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRSQAICAAAGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|288554751|ref|YP_003426686.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4] gi|288545911|gb|ADC49794.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L YI+G+G S +I + + + RV L E E+ +IR+A+ Sbjct: 1 MARVAGVDIPRDKRVVVSLTYIYGVGKTKSSEILAEAGVSEDTRVRDLTEEELGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 EA-HTVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|284042828|ref|YP_003393168.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684] gi|283947049|gb|ADB49793.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684] Length = 126 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP KRV L YI+GIG S ++ K+ I P+ V L E EV ++R I Sbjct: 1 MARIAGINIPLNKRVEIGLTYIYGIGRSRSNELLAKVGISPDTYVRDLTEDEVGKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR + N+KRLM++GCYRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 DS-LTVEGDLRRERSQNVKRLMEIGCYRGLRHRRGLPVRGQKTKTNARTRK 110 >gi|15603258|ref|NP_246332.1| 30S ribosomal protein S13 [Pasteurella multocida subsp. multocida str. Pm70] gi|32363393|sp|Q9CL51|RS13_PASMU RecName: Full=30S ribosomal protein S13 gi|12721768|gb|AAK03477.1| RpS13 [Pasteurella multocida subsp. multocida str. Pm70] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRAQAICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|222150469|ref|YP_002559622.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402] gi|254811153|sp|B9E9L5|RS13_MACCJ RecName: Full=30S ribosomal protein S13 gi|222119591|dbj|BAH16926.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG S+Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRVVIALTYIYGIGRTSAQKILAEANVSEDTRVRDLTEDELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V +NIKRLM++ YRG+RHRRGLP RGQ T NARTRK Sbjct: 61 D-GYKVEGDLRREVNLNIKRLMEIASYRGIRHRRGLPTRGQNTKNNARTRK 110 >gi|317050552|ref|YP_004111668.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5] gi|316945636|gb|ADU65112.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5] Length = 120 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P+ KRV L YI+G+G S+ I ++I +++V +L E EV +R+A+ Sbjct: 1 MARVAGVDLPKNKRVEIGLTYIYGVGRSRSRQILANVSIDMDKKVGELSEDEVNTLRKAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ Y VEGDLR+ V+++IKRL DLGCYRGLRHR GLPVRGQ T N+RTRK Sbjct: 61 EE-YDVEGDLRKNVSLDIKRLKDLGCYRGLRHRSGLPVRGQNTKNNSRTRK 110 >gi|229009644|ref|ZP_04166870.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048] gi|229131143|ref|ZP_04260055.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196] gi|229165123|ref|ZP_04292918.1| 30S ribosomal protein S13 [Bacillus cereus AH621] gi|228618386|gb|EEK75416.1| 30S ribosomal protein S13 [Bacillus cereus AH621] gi|228652356|gb|EEL08281.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196] gi|228751666|gb|EEM01466.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLSEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|300718683|ref|YP_003743486.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661] gi|299064519|emb|CAX61639.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICATTGIAENVKISELSEEQIDILRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|153952886|ref|YP_001393651.1| RpsM [Clostridium kluyveri DSM 555] gi|219853551|ref|YP_002470673.1| hypothetical protein CKR_0208 [Clostridium kluyveri NBRC 12016] gi|189040497|sp|A5N4S2|RS13_CLOK5 RecName: Full=30S ribosomal protein S13 gi|254811142|sp|B9DYD4|RS13_CLOK1 RecName: Full=30S ribosomal protein S13 gi|146345767|gb|EDK32303.1| RpsM [Clostridium kluyveri DSM 555] gi|219567275|dbj|BAH05259.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 123 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG +SQ I + + + RV L E EV +R I Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLPTSQKILKETGVNSDTRVKDLTEEEVNLLRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ ++EGDLRR VA+NIKRL+++G YRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 -KNLKIEGDLRREVALNIKRLIEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110 >gi|88812735|ref|ZP_01127981.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231] gi|88789973|gb|EAR21094.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG + IC I PE ++ +L E+E+ +R + Sbjct: 1 MARIAGVNIPANKHTAIALTSIYGIGRSCAAAICRATGIAPECKIQELTEAELEHLRGEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR VAM+IKRLMDLGCYRG+RHRRGL VRGQRT TNARTRK Sbjct: 61 GK-YVIEGDLRRQVAMDIKRLMDLGCYRGIRHRRGLSVRGQRTRTNARTRK 110 >gi|163938143|ref|YP_001643027.1| 30S ribosomal protein S13 [Bacillus weihenstephanensis KBAB4] gi|229053981|ref|ZP_04195415.1| 30S ribosomal protein S13 [Bacillus cereus AH603] gi|226712695|sp|A9VPA2|RS13_BACWK RecName: Full=30S ribosomal protein S13 gi|163860340|gb|ABY41399.1| ribosomal protein S13 [Bacillus weihenstephanensis KBAB4] gi|228721399|gb|EEL72920.1| 30S ribosomal protein S13 [Bacillus cereus AH603] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKIITEAGISSETRVRDLSEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|304438882|ref|ZP_07398805.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372548|gb|EFM26131.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 120 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG S +I + P+ RV L E+EV +IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIFGIGRSRSNEILKNAEVNPDTRVKDLTEAEVARIRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR VAMNIKRL ++ CYRG+RH RGLPVRGQ T NARTRK Sbjct: 61 DK-YHVEGDLRRDVAMNIKRLREIKCYRGIRHMRGLPVRGQNTKNNARTRK 110 >gi|52783997|ref|YP_089826.1| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|163119191|ref|YP_077426.2| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|319649090|ref|ZP_08003298.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2] gi|81386392|sp|Q65P81|RS13_BACLD RecName: Full=30S ribosomal protein S13 gi|52346499|gb|AAU39133.1| RpsM [Bacillus licheniformis ATCC 14580] gi|145902697|gb|AAU21788.2| ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|317388790|gb|EFV69609.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q I + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQILKEAGVSEDTRVRDLTEEELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|89076302|ref|ZP_01162643.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34] gi|90581700|ref|ZP_01237488.1| 30S ribosomal protein S13 [Vibrio angustum S14] gi|89048006|gb|EAR53595.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34] gi|90437115|gb|EAS62318.1| 30S ribosomal protein S13 [Vibrio angustum S14] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|227494570|ref|ZP_03924886.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436] gi|226832304|gb|EEH64687.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436] Length = 122 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E +++++R+ I Sbjct: 1 MARIAGVDLPREKRMEIALTYIYGVGRTRAAETLEATGVSPDLRVKDATEEDLVKLREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|291166854|gb|EFE28900.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG +S I I P+ R+ L E EV +R+AI Sbjct: 1 MARIAGIDLPREKRVEIGLTYIFGIGRPTSNKILKDTGINPDTRIKDLTEEEVNTLRKAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK Sbjct: 61 D-NYLVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRK 110 >gi|311029075|ref|ZP_07707165.1| 30S ribosomal protein S13 [Bacillus sp. m3-13] Length = 121 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L Y+ GIG +++ + + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDVPRDKRVVISLTYVFGIGRSTAEKVLAEAGVSEDTRVRDLTEEELGKIRDVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DK-IKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|91791561|ref|YP_561212.1| 30S ribosomal protein S13 [Shewanella denitrificans OS217] gi|122969076|sp|Q12ST7|RS13_SHEDO RecName: Full=30S ribosomal protein S13 gi|91713563|gb|ABE53489.1| SSU ribosomal protein S13P [Shewanella denitrificans OS217] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTAIAETAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YSVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|91205855|ref|YP_538210.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C] gi|157826785|ref|YP_001495849.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389] gi|122425381|sp|Q1RHP3|RS13_RICBR RecName: Full=30S ribosomal protein S13 gi|166231920|sp|A8GVD5|RS13_RICB8 RecName: Full=30S ribosomal protein S13 gi|91069399|gb|ABE05121.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C] gi|157802089|gb|ABV78812.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389] Length = 125 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G ++ IC K I +++V L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR V +NIK+ D+ Y+GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRK 111 >gi|325104844|ref|YP_004274498.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145] gi|324973692|gb|ADY52676.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145] Length = 125 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI+GIG K++Q+I + I +++V + + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIYGIGRKTAQNILTQAGISFDKKVQEWTDEELTAIRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG LR V +NIKRLMD+GCYRGLRHR+GLP+RGQRT N+RTRK Sbjct: 61 SESIKVEGQLRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111 >gi|160894731|ref|ZP_02075506.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50] gi|156863665|gb|EDO57096.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50] Length = 122 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SSQ I + + P+ R + L + EV +I + I Sbjct: 1 MARISGVDLPRDKRVEIGLTYVYGIGLASSQRILKEANVNPDTRCNDLTDDEVRRISEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR VA+NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK Sbjct: 61 NATQTVEGDLRREVALNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 111 >gi|94500970|ref|ZP_01307495.1| ribosomal protein S13 [Oceanobacter sp. RED65] gi|94426910|gb|EAT11893.1| ribosomal protein S13 [Oceanobacter sp. RED65] Length = 118 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++G+G +++ IC + I ++ L + ++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYVYGVGLPTAKQICKAVGIEESTKISDLSDEKLDELRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVSMNIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 [Oribacterium sinus F0268] gi|227842378|gb|EEJ52603.1| ribosomal protein S13 [Oribacterium sinus F0268] Length = 122 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + EV + I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAETGVNPDTRVKDLTDDEVKTLATYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 61 AEHQMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111 >gi|229592881|ref|YP_002875000.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25] gi|259494687|sp|C3K2V4|RS13_PSEFS RecName: Full=30S ribosomal protein S13 gi|229364747|emb|CAY52728.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25] gi|310941661|dbj|BAJ24184.1| 30S ribosomal protein S13 [Pseudomonas fluorescens] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAAKIKDLSDEQIELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|120597011|ref|YP_961585.1| 30S ribosomal protein S13 [Shewanella sp. W3-18-1] gi|146294819|ref|YP_001185243.1| 30S ribosomal protein S13 [Shewanella putrefaciens CN-32] gi|158706278|sp|A1RED6|RS13_SHESW RecName: Full=30S ribosomal protein S13 gi|166231925|sp|A4YBW1|RS13_SHEPC RecName: Full=30S ribosomal protein S13 gi|120557104|gb|ABM23031.1| SSU ribosomal protein S13P [Shewanella sp. W3-18-1] gi|145566509|gb|ABP77444.1| SSU ribosomal protein S13P [Shewanella putrefaciens CN-32] gi|319424602|gb|ADV52676.1| 30S ribosomal protein S13 [Shewanella putrefaciens 200] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|26987217|ref|NP_742642.1| 30S ribosomal protein S13 [Pseudomonas putida KT2440] gi|104779777|ref|YP_606275.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48] gi|148545761|ref|YP_001265863.1| 30S ribosomal protein S13 [Pseudomonas putida F1] gi|167031521|ref|YP_001666752.1| 30S ribosomal protein S13 [Pseudomonas putida GB-1] gi|32363292|sp|Q88QL3|RS13_PSEPK RecName: Full=30S ribosomal protein S13 gi|158706264|sp|Q1IFU4|RS13_PSEE4 RecName: Full=30S ribosomal protein S13 gi|166231917|sp|A5VXR9|RS13_PSEP1 RecName: Full=30S ribosomal protein S13 gi|189044288|sp|B0KK88|RS13_PSEPG RecName: Full=30S ribosomal protein S13 gi|24981856|gb|AAN66106.1|AE016239_1 ribosomal protein S13 [Pseudomonas putida KT2440] gi|95108764|emb|CAK13458.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48] gi|148509819|gb|ABQ76679.1| SSU ribosomal protein S13P [Pseudomonas putida F1] gi|166858009|gb|ABY96416.1| ribosomal protein S13 [Pseudomonas putida GB-1] gi|310941070|dbj|BAJ24409.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941100|dbj|BAJ24424.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941631|dbj|BAJ24169.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941991|dbj|BAJ24349.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|313496841|gb|ADR58207.1| RpsM [Pseudomonas putida BIRD-1] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|229077435|ref|ZP_04210086.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2] gi|228705885|gb|EEL58220.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2] Length = 127 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|229083455|ref|ZP_04215803.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44] gi|228699888|gb|EEL52525.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44] Length = 121 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGVSEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|94312225|ref|YP_585435.1| 30S ribosomal protein S13 [Cupriavidus metallidurans CH34] gi|194291000|ref|YP_002006907.1| 30S ribosomal protein s13 [Cupriavidus taiwanensis LMG 19424] gi|158706270|sp|Q1LI60|RS13_RALME RecName: Full=30S ribosomal protein S13 gi|226712725|sp|B3R7E6|RS13_CUPTR RecName: Full=30S ribosomal protein S13 gi|93356077|gb|ABF10166.1| 30S ribosomal subunit protein S13 [Cupriavidus metallidurans CH34] gi|193224835|emb|CAQ70846.1| 30S ribosomal subunit protein S13 [Cupriavidus taiwanensis LMG 19424] Length = 121 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+GIG ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGIGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163840860|ref|YP_001625265.1| 30S ribosomal protein S13 [Renibacterium salmoninarum ATCC 33209] gi|189044289|sp|A9WSR3|RS13_RENSM RecName: Full=30S ribosomal protein S13 gi|162954336|gb|ABY23851.1| SSU ribosomal protein S13P [Renibacterium salmoninarum ATCC 33209] Length = 125 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G + + I P+ RV L ++E++Q+R I Sbjct: 1 MARLAGVDLPREKRLEVALTYIYGVGKTRAHKTLAETGISPDVRVKDLSDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EVNYKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRK 111 >gi|146281192|ref|YP_001171345.1| 30S ribosomal protein S13 [Pseudomonas stutzeri A1501] gi|158706265|sp|A4VHQ2|RS13_PSEU5 RecName: Full=30S ribosomal protein S13 gi|145569397|gb|ABP78503.1| ribosomal protein S13 [Pseudomonas stutzeri A1501] gi|310941901|dbj|BAJ24304.1| 30S ribosomal protein S13 [Pseudomonas stutzeri] gi|327479345|gb|AEA82655.1| 30S ribosomal protein S13 [Pseudomonas stutzeri DSM 4166] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G +Q+IC + P ++ L + +V +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTRAQEICAATGVNPAAKIKDLSDEQVELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRRDVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|120553674|ref|YP_958025.1| 30S ribosomal protein S13 [Marinobacter aquaeolei VT8] gi|158706245|sp|A1TYL9|RS13_MARAV RecName: Full=30S ribosomal protein S13 gi|120323523|gb|ABM17838.1| SSU ribosomal protein S13P [Marinobacter aquaeolei VT8] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGKTTAQKLCDATGVKPDAKVKDLSDEQLEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVQMNIKRLKDLGCFRGLRHRHGLPVRGQRTKTNARTRK 110 >gi|317153935|ref|YP_004121983.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2] gi|316944186|gb|ADU63237.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2] Length = 123 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + I + + + ++ L EV IR I Sbjct: 1 MARIAGVDLPRNKRMDIALTYIYGIGRTMALQILDTVKVDWQKNSDDLSADEVNVIRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR + NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK Sbjct: 61 ENNHKVEGDLRRDITSNIKRLMDIGSYRGLRHRRGLPVRGQKTKTNARTRK 111 >gi|300779799|ref|ZP_07089655.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030] gi|300533909|gb|EFK54968.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030] Length = 122 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKELLEKTGISPDLRTDNLTDDQVAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENSWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|30018404|ref|NP_830035.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 14579] gi|30260326|ref|NP_842703.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames] gi|47525391|ref|YP_016740.1| 30S ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183169|ref|YP_026421.1| 30S ribosomal protein S13 [Bacillus anthracis str. Sterne] gi|49481683|ref|YP_034486.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145084|ref|YP_081745.1| 30S ribosomal protein S13 [Bacillus cereus E33L] gi|118475903|ref|YP_893054.1| 30S ribosomal protein S13 [Bacillus thuringiensis str. Al Hakam] gi|206972311|ref|ZP_03233258.1| 30S ribosomal protein S13 [Bacillus cereus AH1134] gi|218234072|ref|YP_002364984.1| 30S ribosomal protein S13 [Bacillus cereus B4264] gi|218901340|ref|YP_002449174.1| ribosomal protein S13 [Bacillus cereus AH820] gi|225862187|ref|YP_002747565.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102] gi|227812808|ref|YP_002812817.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684] gi|228912874|ref|ZP_04076521.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919085|ref|ZP_04082464.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228925388|ref|ZP_04088484.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931637|ref|ZP_04094543.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943940|ref|ZP_04106325.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950683|ref|ZP_04112817.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956576|ref|ZP_04118372.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228983390|ref|ZP_04143603.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229041040|ref|ZP_04189803.1| 30S ribosomal protein S13 [Bacillus cereus AH676] gi|229067900|ref|ZP_04201217.1| 30S ribosomal protein S13 [Bacillus cereus F65185] gi|229089266|ref|ZP_04220547.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42] gi|229107821|ref|ZP_04237457.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15] gi|229119797|ref|ZP_04249058.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201] gi|229125652|ref|ZP_04254684.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4] gi|229142941|ref|ZP_04271382.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24] gi|229148544|ref|ZP_04276800.1| 30S ribosomal protein S13 [Bacillus cereus m1550] gi|229153913|ref|ZP_04282043.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342] gi|229176735|ref|ZP_04304139.1| 30S ribosomal protein S13 [Bacillus cereus 172560W] gi|229182529|ref|ZP_04309780.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1] gi|229188420|ref|ZP_04315468.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876] gi|229602339|ref|YP_002864786.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248] gi|254686634|ref|ZP_05150493.1| 30S ribosomal protein S13 [Bacillus anthracis str. CNEVA-9066] gi|254726286|ref|ZP_05188068.1| 30S ribosomal protein S13 [Bacillus anthracis str. A1055] gi|254735291|ref|ZP_05192999.1| 30S ribosomal protein S13 [Bacillus anthracis str. Western North America USA6153] gi|254739483|ref|ZP_05197181.1| 30S ribosomal protein S13 [Bacillus anthracis str. Kruger B] gi|254751245|ref|ZP_05203283.1| 30S ribosomal protein S13 [Bacillus anthracis str. Vollum] gi|254756846|ref|ZP_05208874.1| 30S ribosomal protein S13 [Bacillus anthracis str. Australia 94] gi|296500968|ref|YP_003662668.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171] gi|300119552|ref|ZP_07057096.1| 30S ribosomal protein S13 [Bacillus cereus SJ1] gi|301051872|ref|YP_003790083.1| 30S ribosomal protein S13 [Bacillus anthracis CI] gi|49065839|sp|P62175|RS13_BACCR RecName: Full=30S ribosomal protein S13 gi|49065840|sp|P62176|RS13_BACAN RecName: Full=30S ribosomal protein S13 gi|81397477|sp|Q6HPN4|RS13_BACHK RecName: Full=30S ribosomal protein S13 gi|81689825|sp|Q63H66|RS13_BACCZ RecName: Full=30S ribosomal protein S13 gi|158706335|sp|A0R8K4|RS13_BACAH RecName: Full=30S ribosomal protein S13 gi|226712691|sp|B7JKE5|RS13_BACC0 RecName: Full=30S ribosomal protein S13 gi|226712693|sp|B7HJ73|RS13_BACC4 RecName: Full=30S ribosomal protein S13 gi|254811126|sp|C3P9T0|RS13_BACAA RecName: Full=30S ribosomal protein S13 gi|254811127|sp|C3LJW9|RS13_BACAC RecName: Full=30S ribosomal protein S13 gi|254811128|sp|C1ET64|RS13_BACC3 RecName: Full=30S ribosomal protein S13 gi|29893944|gb|AAP07236.1| SSU ribosomal protein S13P [Bacillus cereus ATCC 14579] gi|30253647|gb|AAP24189.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames] gi|47500539|gb|AAT29215.1| ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor'] gi|49177096|gb|AAT52472.1| ribosomal protein S13 [Bacillus anthracis str. Sterne] gi|49333239|gb|AAT63885.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978553|gb|AAU20103.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus cereus E33L] gi|118415128|gb|ABK83547.1| SSU ribosomal protein S13P [Bacillus thuringiensis str. Al Hakam] gi|206732885|gb|EDZ50060.1| 30S ribosomal protein S13 [Bacillus cereus AH1134] gi|218162029|gb|ACK62021.1| ribosomal protein S13 [Bacillus cereus B4264] gi|218535885|gb|ACK88283.1| ribosomal protein S13 [Bacillus cereus AH820] gi|225787084|gb|ACO27301.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102] gi|227003895|gb|ACP13638.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684] gi|228595094|gb|EEK52865.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876] gi|228600984|gb|EEK58553.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1] gi|228606778|gb|EEK64195.1| 30S ribosomal protein S13 [Bacillus cereus 172560W] gi|228629594|gb|EEK86291.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342] gi|228634960|gb|EEK91533.1| 30S ribosomal protein S13 [Bacillus cereus m1550] gi|228640562|gb|EEK96951.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24] gi|228657844|gb|EEL13650.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4] gi|228663698|gb|EEL19277.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201] gi|228675670|gb|EEL30878.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15] gi|228694105|gb|EEL47787.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42] gi|228715259|gb|EEL67118.1| 30S ribosomal protein S13 [Bacillus cereus F65185] gi|228727337|gb|EEL78531.1| 30S ribosomal protein S13 [Bacillus cereus AH676] gi|228776380|gb|EEM24733.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228803141|gb|EEM49963.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809034|gb|EEM55519.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815773|gb|EEM62009.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828065|gb|EEM73793.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834310|gb|EEM79851.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228840610|gb|EEM85872.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846810|gb|EEM91815.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266747|gb|ACQ48384.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248] gi|296322020|gb|ADH04948.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171] gi|298723024|gb|EFI63922.1| 30S ribosomal protein S13 [Bacillus cereus SJ1] gi|300374041|gb|ADK02945.1| 30S ribosomal protein S13 [Bacillus cereus biovar anthracis str. CI] Length = 121 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|114561358|ref|YP_748871.1| 30S ribosomal protein S13 [Shewanella frigidimarina NCIMB 400] gi|122301096|sp|Q089N2|RS13_SHEFN RecName: Full=30S ribosomal protein S13 gi|114332651|gb|ABI70033.1| SSU ribosomal protein S13P [Shewanella frigidimarina NCIMB 400] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTSIAEDAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|116624177|ref|YP_826333.1| 30S ribosomal protein S13 [Candidatus Solibacter usitatus Ellin6076] gi|122253107|sp|Q01WB7|RS13_SOLUE RecName: Full=30S ribosomal protein S13 gi|116227339|gb|ABJ86048.1| SSU ribosomal protein S13P [Candidatus Solibacter usitatus Ellin6076] Length = 128 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/122 (50%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P KR L YI+GIG S+ + ++ I ++++ L E E+ ++R + Sbjct: 1 MARLAGVDLPPGKRAEIGLTYIYGIGRTRSKSLLHRAGIDFDKKIRDLTEDEINKVRTIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ VEGDLR+ ++MNIKR +++G YRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 EEEGAVEGDLRKEISMNIKRHIEMGSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319442998|ref|ZP_07992154.1| 30S ribosomal protein S13 [Corynebacterium variabile DSM 44702] Length = 122 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + ++ K I P+ R L + +V ++ I Sbjct: 1 MARLAGVDLPRDKRMEVALTYIYGIGPARAAELLEKTGISPDLRSKDLTDEQVSALKDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTWKVEGDLRREVAADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|310940980|dbj|BAJ24364.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|30248440|ref|NP_840510.1| 30S ribosomal protein S13 [Nitrosomonas europaea ATCC 19718] gi|32363227|sp|P59755|RS13_NITEU RecName: Full=30S ribosomal protein S13 gi|30138326|emb|CAD84334.1| Ribosomal protein S13 [Nitrosomonas europaea ATCC 19718] Length = 119 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V AL I+GIG +++ IC+ L IPP ++ L + ++ ++R+++ Sbjct: 1 MARIAGVNLPSNKHVNIALTAIYGIGNTTARKICSDLQIPPFIKLKDLEDIKLDELRESV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR ++MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 SK-LIVEGDLRREISMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|241763532|ref|ZP_04761584.1| ribosomal protein S13 [Acidovorax delafieldii 2AN] gi|241367263|gb|EER61603.1| ribosomal protein S13 [Acidovorax delafieldii 2AN] Length = 121 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L +S++ +IR+ I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTRARKICEATGIAYSKKIKDLSDSDLEKIREQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|330953175|gb|EGH53435.1| 30S ribosomal protein S13 [Pseudomonas syringae Cit 7] Length = 118 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDL R + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLGREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|257054495|ref|YP_003132327.1| 30S ribosomal protein S13P [Saccharomonospora viridis DSM 43017] gi|256584367|gb|ACU95500.1| SSU ribosomal protein S13P [Saccharomonospora viridis DSM 43017] Length = 126 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+DI + P+ RV L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRLEIALTYIYGIGRTRSKDIIAATQLNPDVRVKDLGDDDLAKLREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++Y+VEGDLRR V +I+R +++GCY GLR RRGLPVRGQRT TNARTRK Sbjct: 61 EENYKVEGDLRREVNADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRK 111 >gi|224477196|ref|YP_002634802.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus TM300] gi|254811165|sp|B9DM53|RS13_STACT RecName: Full=30S ribosomal protein S13 gi|222421803|emb|CAL28617.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus TM300] Length = 121 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+G+G ++ I + + P+ RV L + E+ +IR+ + Sbjct: 1 MARIAGIDIPREKRVVISLTYIYGVGKSTAAKILEEANVSPDTRVKDLTDDELGRIRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DA-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|78776525|ref|YP_392840.1| 30S ribosomal protein S13 [Sulfurimonas denitrificans DSM 1251] gi|91207632|sp|Q30TS6|RS13_SULDN RecName: Full=30S ribosomal protein S13 gi|78497065|gb|ABB43605.1| SSU ribosomal protein S13P [Sulfurimonas denitrificans DSM 1251] Length = 120 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L Y++GIG +S+ I + I +RV++L E ++ I + I Sbjct: 1 MARISGVDLPKKKRIEYGLTYVYGIGLHASRKILDATGIDYNKRVYELNEDDIAAITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK Sbjct: 61 RASHVVEGDLRKQVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111 >gi|332181994|gb|AEE17682.1| 30S ribosomal protein S13 [Treponema brennaborense DSM 12168] Length = 121 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ +IC K I P+ ++ L + ++ +R I Sbjct: 1 MARIAGVDLPN-KHVNIALTYIYGIGRSSADEICKKTKINPDAMINDLSQDDLAALRTVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + +Y+VEG LR + +NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTR Sbjct: 60 DGEYKVEGRLRSEIGLNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTR 109 >gi|325272030|ref|ZP_08138473.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51] gi|310941811|dbj|BAJ24259.1| 30S ribosomal protein S13 [Pseudomonas fulva] gi|324102834|gb|EGC00238.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51] Length = 118 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICVDAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|302379821|ref|ZP_07268305.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3] gi|302312409|gb|EFK94406.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3] Length = 116 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR VAMNIKRL ++ CYRGLRH++GLPVRGQ T NARTRK Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGLRHKKGLPVRGQHTKNNARTRK 110 >gi|256830516|ref|YP_003159244.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028] gi|256579692|gb|ACU90828.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028] Length = 123 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG ++ I + I + L ++ +R+ + Sbjct: 1 MARLVGVDLPRNKRLDIALTYIYGIGRATALKILDATGIDWTKNSDDLTSDDINTLRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR + NIKRLMD+GCYRGLRHRRGLP RGQRTHTNARTRK Sbjct: 61 EASHKVEGDLRREIVANIKRLMDIGCYRGLRHRRGLPCRGQRTHTNARTRK 111 >gi|238921421|ref|YP_002934936.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146] gi|269140551|ref|YP_003297252.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202] gi|259494675|sp|C5BF29|RS13_EDWI9 RecName: Full=30S ribosomal protein S13 gi|238870990|gb|ACR70701.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146] gi|267986212|gb|ACY86041.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202] gi|304560337|gb|ADM43001.1| SSU ribosomal protein S13p (S18e) [Edwardsiella tarda FL6-60] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICAAAGIAENVKISELSEEQIETLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVTLSIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|297571897|ref|YP_003697671.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595] gi|296932244|gb|ADH93052.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595] Length = 124 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG +Q+ + P+ RV L E ++++++ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGLTRAQESLAATGVNPDTRVKDLTEDDLVKLKNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DENYKVEGDLRREIQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|293390663|ref|ZP_06634997.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951197|gb|EFE01316.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D7S-1] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 SK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|224531523|ref|ZP_03672155.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116] gi|224510988|gb|EEF81394.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116] Length = 125 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CN+ I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNRSNISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|71065081|ref|YP_263808.1| 30S ribosomal protein S13 [Psychrobacter arcticus 273-4] gi|91207720|sp|Q4FUD4|RS13_PSYA2 RecName: Full=30S ribosomal protein S13 gi|71038066|gb|AAZ18374.1| SSU ribosomal protein S13P [Psychrobacter arcticus 273-4] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q I + I P +V QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK Sbjct: 61 SE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110 >gi|310941871|dbj|BAJ24289.1| 30S ribosomal protein S13 [Pseudomonas straminea] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKICAATGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 61 AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110 >gi|300812373|ref|ZP_07092808.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496678|gb|EFK31765.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 116 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|111023122|ref|YP_706094.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1] gi|226365621|ref|YP_002783404.1| 30S ribosomal protein S13 [Rhodococcus opacus B4] gi|123045552|sp|Q0S3F0|RS13_RHOSR RecName: Full=30S ribosomal protein S13 gi|254811162|sp|C1B038|RS13_RHOOB RecName: Full=30S ribosomal protein S13 gi|110822652|gb|ABG97936.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1] gi|226244111|dbj|BAH54459.1| 30S ribosomal protein S13 [Rhodococcus opacus B4] Length = 124 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + + P+ R L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|73542841|ref|YP_297361.1| 30S ribosomal protein S13 [Ralstonia eutropha JMP134] gi|91207721|sp|Q46WG6|RS13_RALEJ RecName: Full=30S ribosomal protein S13 gi|72120254|gb|AAZ62517.1| SSU ribosomal protein S13P [Ralstonia eutropha JMP134] Length = 121 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+G+G ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163847947|ref|YP_001635991.1| 30S ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl] gi|222525827|ref|YP_002570298.1| 30S ribosomal protein S13 [Chloroflexus sp. Y-400-fl] gi|189040495|sp|A9WH90|RS13_CHLAA RecName: Full=30S ribosomal protein S13 gi|254811139|sp|B9LJF6|RS13_CHLSY RecName: Full=30S ribosomal protein S13 gi|163669236|gb|ABY35602.1| ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl] gi|222449706|gb|ACM53972.1| ribosomal protein S13 [Chloroflexus sp. Y-400-fl] Length = 127 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/100 (61%), Positives = 79/100 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ A+ YI+GIG + +I K + PERRV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRG Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRG 100 >gi|289209307|ref|YP_003461373.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix] gi|288944938|gb|ADC72637.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AG+NIP K V AL I+GIG ++ IC + PE +V L ++EV +R I Sbjct: 1 MARVAGINIPDQKHTVVALTAIYGIGPTRARQICEAAGVRPEIKVRDLTDAEVDALRAQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR ++MNIKRLMDLGCYRG+RHRRGLP+RGQ+T TNARTRK Sbjct: 61 DR-IPVEGDLRREISMNIKRLMDLGCYRGVRHRRGLPLRGQQTQTNARTRK 110 >gi|289550167|ref|YP_003471071.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis HKU09-01] gi|315659203|ref|ZP_07912067.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590] gi|289179699|gb|ADC86944.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis HKU09-01] gi|315495628|gb|EFU83959.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590] Length = 121 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGTSTAQKIVEQANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DS-FKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|330470147|ref|YP_004407890.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032] gi|328813118|gb|AEB47290.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032] Length = 126 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYEGIRHRRGLPVRGQRTRTNARTRK 111 >gi|262038712|ref|ZP_06012072.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264] gi|261747264|gb|EEY34743.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264] Length = 121 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG +S +I K + + +V L E +V +IR + Sbjct: 1 MARIAGVDIPRNKRVEISLTYIFGIGRSTSNEILEKAGVDKDIKVKDLTEEQVGKIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL+D+ YRGLRHR GLPVRGQ+T TNARTRK K +A+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKMAIAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|158317767|ref|YP_001510275.1| 30S ribosomal protein S13 [Frankia sp. EAN1pec] gi|226712739|sp|A8LB08|RS13_FRASN RecName: Full=30S ribosomal protein S13 gi|158113172|gb|ABW15369.1| ribosomal protein S13 [Frankia sp. EAN1pec] Length = 126 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S+D + P+ RV L + EV ++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATGVNPDTRVRDLTDDEVQKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|85057777|ref|YP_456693.1| 30S ribosomal protein S13 [Aster yellows witches'-broom phytoplasma AYWB] gi|123518126|sp|Q2NIX9|RS13_AYWBP RecName: Full=30S ribosomal protein S13 gi|84789882|gb|ABC65614.1| SSU ribosomal protein S13P [Aster yellows witches'-broom phytoplasma AYWB] Length = 126 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K S I N+L I RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELKIDQNIRVKNLTEQQLSALRIEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K K +A Sbjct: 61 TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAAIAG 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|262273357|ref|ZP_06051171.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886] gi|262222335|gb|EEY73646.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAESTKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|113869408|ref|YP_727897.1| 30S ribosomal protein S13 [Ralstonia eutropha H16] gi|123328830|sp|Q0K642|RS13_RALEH RecName: Full=30S ribosomal protein S13 gi|113528184|emb|CAJ94529.1| SSU ribosomal protein S13 [Ralstonia eutropha H16] Length = 121 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+G+G ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|298531063|ref|ZP_07018464.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans ASO3-1] gi|298509086|gb|EFI32991.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans ASO3-1] Length = 122 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ K++ +L YI+GIG ++ I + + R+ +L EV IR + Sbjct: 1 MARIAGVDLPKRKKIGISLTYIYGIGRTTALKILDASGVDWTRKTEELTSDEVNVIRGEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR + +IKRLMD+GCYRGLRHRR +PVRGQRTHTNAR RK Sbjct: 61 ENNYKVEGDLRREKSADIKRLMDIGCYRGLRHRRSMPVRGQRTHTNARIRK 111 >gi|172056165|ref|YP_001812625.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15] gi|226712737|sp|B1YGX5|RS13_EXIS2 RecName: Full=30S ribosomal protein S13 gi|171988686|gb|ACB59608.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15] Length = 121 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L YI+G+G ++Q + + I + R +L E ++ Q+R + Sbjct: 1 MARIAGVDIPREKRIVISLTYIYGVGKTTAQKVLKEAGISEDTRTRELTEEQLNQLRDGL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQ T N+RTRK Sbjct: 61 DK-VKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQNTKNNSRTRK 110 >gi|313888778|ref|ZP_07822439.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845147|gb|EFR32547.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 120 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SQ+I + + RV L E+E+ +IR+ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGKPRSQEILTAAGVDFDTRVKDLTEAELAKIREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK Sbjct: 61 DK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKMGLPVRGQKTKTNARTRK 110 >gi|16272741|ref|NP_438959.1| 30S ribosomal protein S13 [Haemophilus influenzae Rd KW20] gi|1173196|sp|P44380|RS13_HAEIN RecName: Full=30S ribosomal protein S13 gi|1573810|gb|AAC22458.1| ribosomal protein S13 (rpS13) [Haemophilus influenzae Rd KW20] Length = 122 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|325684743|gb|EGD26897.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 116 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|219849863|ref|YP_002464296.1| 30S ribosomal protein S13 [Chloroflexus aggregans DSM 9485] gi|254811138|sp|B8G6Q1|RS13_CHLAD RecName: Full=30S ribosomal protein S13 gi|219544122|gb|ACL25860.1| ribosomal protein S13 [Chloroflexus aggregans DSM 9485] Length = 126 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/100 (61%), Positives = 78/100 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ A+ YI+GIG + D+ K + P RRV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKKIEIAITYIYGIGRSNGMDVLRKANVDPNRRVRDLTEEEVGRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRG Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRG 100 >gi|91774658|ref|YP_544414.1| 30S ribosomal protein S13 [Methylobacillus flagellatus KT] gi|123380633|sp|Q1H4L4|RS13_METFK RecName: Full=30S ribosomal protein S13 gi|91708645|gb|ABE48573.1| SSU ribosomal protein S13P [Methylobacillus flagellatus KT] Length = 120 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G +++ IC + ++ L ++EV ++R + Sbjct: 1 MARIAGVNIPNHKHTEIALTSIYGVGRTTAKQICLAAGVSATAKIKDLNDAEVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + QVEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-LQVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|12045028|ref|NP_072838.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37] gi|255660324|ref|ZP_05405733.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37] gi|1350932|sp|P47421|RS13_MYCGE RecName: Full=30S ribosomal protein S13 gi|3844771|gb|AAC71394.1| ribosomal protein S13 [Mycoplasma genitalium G37] gi|166079035|gb|ABY79653.1| ribosomal protein S13 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 124 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KR+ AL YI GIG S++ I K I P++RV L E E++ IR A Sbjct: 1 MARILGIDIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EGDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK Sbjct: 60 ASGYKIEGDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRK 110 >gi|331004908|ref|ZP_08328324.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989] gi|330421295|gb|EGG95545.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG +++ I ++ I ++ +L E+++ +IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVYGIGSTTAKRILAEVGIAEATKISELSETDMDRIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AKE-TVEGDLRREVSMNIKRLMDLGCYRGIRHRRNLPLRGQRTKTNARTRK 110 >gi|217077307|ref|YP_002335025.1| 30S ribosomal protein S13 [Thermosipho africanus TCF52B] gi|226712795|sp|B7IHX0|RS13_THEAB RecName: Full=30S ribosomal protein S13 gi|217037162|gb|ACJ75684.1| ribosomal protein S13p/S18e [Thermosipho africanus TCF52B] Length = 122 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL YI+GIG ++ IC I P++RV +L + E+ +I I Sbjct: 1 MARIVGVEIPNDKKVEIALTYIYGIGRTRAKQICEATNIDPDKRVRELNDEEISKIATYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+++VEG+LR V NIKRL+D+GCYRG RH+ GLPVRGQ+T +NARTRK Sbjct: 61 QQNFKVEGELRTEVMQNIKRLIDIGCYRGFRHKLGLPVRGQKTKSNARTRK 111 >gi|24371851|ref|NP_715893.1| 30S ribosomal protein S13 [Shewanella oneidensis MR-1] gi|113968566|ref|YP_732359.1| 30S ribosomal protein S13 [Shewanella sp. MR-4] gi|114045729|ref|YP_736279.1| 30S ribosomal protein S13 [Shewanella sp. MR-7] gi|117918679|ref|YP_867871.1| 30S ribosomal protein S13 [Shewanella sp. ANA-3] gi|32363324|sp|Q8EK48|RS13_SHEON RecName: Full=30S ribosomal protein S13 gi|123030062|sp|Q0HNR5|RS13_SHESM RecName: Full=30S ribosomal protein S13 gi|123131836|sp|Q0I083|RS13_SHESR RecName: Full=30S ribosomal protein S13 gi|158706277|sp|A0KRP6|RS13_SHESA RecName: Full=30S ribosomal protein S13 gi|24345668|gb|AAN53338.1|AE015474_1 ribosomal protein S13 [Shewanella oneidensis MR-1] gi|113883250|gb|ABI37302.1| SSU ribosomal protein S13P [Shewanella sp. MR-4] gi|113887171|gb|ABI41222.1| SSU ribosomal protein S13P [Shewanella sp. MR-7] gi|117611011|gb|ABK46465.1| SSU ribosomal protein S13P [Shewanella sp. ANA-3] Length = 118 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|317494320|ref|ZP_07952734.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917570|gb|EFV38915.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 118 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|319893176|ref|YP_004150051.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius HKU10-03] gi|317162872|gb|ADV06415.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius HKU10-03] gi|323463776|gb|ADX75929.1| ribosomal protein S13 [Staphylococcus pseudintermedius ED99] Length = 121 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG S+Q I ++ + + RV L + E+ +IR+ + Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGIGKTSAQKILSEANVSEDTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPV GQ+T NARTRK Sbjct: 61 DG-YKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVNGQKTKNNARTRK 110 >gi|329298512|ref|ZP_08255848.1| 30S ribosomal protein S13 [Plautia stali symbiont] Length = 118 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NI K V AL I GIG S+ IC + I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINISDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRRKITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|42779216|ref|NP_976463.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10987] gi|152973981|ref|YP_001373498.1| 30S ribosomal protein S13 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|217957710|ref|YP_002336254.1| 30S ribosomal protein S13 [Bacillus cereus AH187] gi|222093905|ref|YP_002527955.1| 30S ribosomal protein s13 [Bacillus cereus Q1] gi|229136981|ref|ZP_04265608.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26] gi|229194525|ref|ZP_04321328.1| 30S ribosomal protein S13 [Bacillus cereus m1293] gi|81411360|sp|Q73F71|RS13_BACC1 RecName: Full=30S ribosomal protein S13 gi|189040490|sp|A7GK45|RS13_BACCN RecName: Full=30S ribosomal protein S13 gi|226712694|sp|B7HQW9|RS13_BACC7 RecName: Full=30S ribosomal protein S13 gi|254811129|sp|B9IZL9|RS13_BACCQ RecName: Full=30S ribosomal protein S13 gi|42735131|gb|AAS39071.1| ribosomal protein S13 [Bacillus cereus ATCC 10987] gi|152022733|gb|ABS20503.1| ribosomal protein S13 [Bacillus cytotoxicus NVH 391-98] gi|217063520|gb|ACJ77770.1| ribosomal protein S13 [Bacillus cereus AH187] gi|221237953|gb|ACM10663.1| ribosomal protein S13 [Bacillus cereus Q1] gi|228588991|gb|EEK47006.1| 30S ribosomal protein S13 [Bacillus cereus m1293] gi|228646519|gb|EEL02726.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26] gi|324324126|gb|ADY19386.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 121 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|237749537|ref|ZP_04580017.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13] gi|229380899|gb|EEO30990.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13] Length = 121 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + +V L I GIG +++IC + P ++V L ++++ ++R I Sbjct: 1 MARIAGVNIPNHQHIVIGLTAIFGIGRPRAEEICAATGVDPTKKVKDLDDNDLEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|153854995|ref|ZP_01996208.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814] gi|149752492|gb|EDM62423.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814] Length = 127 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDDDVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 66 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 116 >gi|93005336|ref|YP_579773.1| 30S ribosomal protein S13 [Psychrobacter cryohalolentis K5] gi|122415888|sp|Q1QDG4|RS13_PSYCK RecName: Full=30S ribosomal protein S13 gi|92393014|gb|ABE74289.1| SSU ribosomal protein S13P [Psychrobacter cryohalolentis K5] Length = 118 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q I + I P +V QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK Sbjct: 61 AE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110 >gi|239825718|ref|YP_002948342.1| 30S ribosomal protein S13 [Geobacillus sp. WCH70] gi|259494681|sp|C5D3U2|RS13_GEOSW RecName: Full=30S ribosomal protein S13 gi|239806011|gb|ACS23076.1| ribosomal protein S13 [Geobacillus sp. WCH70] Length = 121 Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 85/111 (76%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRL+++GCYRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 GR-LKVEGDLRREVSLNIKRLIEIGCYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|257454068|ref|ZP_05619342.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60] gi|257448546|gb|EEV23515.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60] Length = 118 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + +L YI GIG ++ I + I P ++ +L ++++ +R + Sbjct: 1 MARIAGVNIPDNKHAIISLTYIFGIGRTTAAKILEAVNIAPTTKISELNDTQLDAVRTQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y EGDLRR ++MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK Sbjct: 61 AE-YATEGDLRREISMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRK 110 >gi|300742032|ref|ZP_07072053.1| 30S ribosomal protein S13 [Rothia dentocariosa M567] gi|311111946|ref|YP_003983168.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931] gi|300381217|gb|EFJ77779.1| 30S ribosomal protein S13 [Rothia dentocariosa M567] gi|310943440|gb|ADP39734.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931] Length = 153 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + + P+ RV L + E++ +R I Sbjct: 32 MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 91 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 92 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 142 >gi|225709440|gb|ACO10566.1| 30S ribosomal protein S13 [Caligus rogercresseyi] Length = 125 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR V L YI+GIG SS+ I + I +V + + ++ IRQ + Sbjct: 1 MARIAGVDLPKNKRGVIGLTYIYGIGLTSSKKILVEAEIDESVKVREWSDKDIKSIRQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y VEG LR + +NIKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK Sbjct: 61 ADSYTVEGQLRTEIQLNIKRLMDIACYRGLRHRKGLPLRGQRTQTNARTRK 111 >gi|148377784|ref|YP_001256660.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2] gi|291320471|ref|YP_003515735.1| 30S ribosomal protein S13 [Mycoplasma agalactiae] gi|313678390|ref|YP_004056130.1| 30S ribosomal protein S13 [Mycoplasma bovis PG45] gi|226712766|sp|A5IYW1|RS13_MYCAP RecName: Full=30S ribosomal protein S13 gi|148291830|emb|CAL59220.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2] gi|290752806|emb|CBH40781.1| 30S ribosomal protein S13 [Mycoplasma agalactiae] gi|312950177|gb|ADR24772.1| ribosomal protein S13 [Mycoplasma bovis PG45] Length = 123 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG S+Q+IC K I RV L E+++ IR+ I Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGRTSAQEICAKAKIDENIRVKDLSEAQLSAIRE-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T +NARTRK Sbjct: 60 AKEYVTEGDLRREVSLNIKRLMEVKCYRGIRHRKGLPVRGQSTKSNARTRK 110 >gi|85713164|ref|ZP_01044196.1| Ribosomal protein S13 [Idiomarina baltica OS145] gi|85693034|gb|EAQ31000.1| Ribosomal protein S13 [Idiomarina baltica OS145] Length = 118 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG S IC I + ++ L E ++ +R+A+ Sbjct: 1 MARIAGINVPDNKHAVIALTAIYGIGRTRSSAICEAAGIAEDTQIGTLSEEKLDVLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|104773566|ref|YP_618546.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513563|ref|YP_812469.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275667|sp|Q04BZ1|RS13_LACDB RecName: Full=30S ribosomal protein S13 gi|123077333|sp|Q1GBJ4|RS13_LACDA RecName: Full=30S ribosomal protein S13 gi|103422647|emb|CAI97255.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092878|gb|ABJ58031.1| SSU ribosomal protein S13P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125198|gb|ADY84528.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 116 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|218135256|ref|ZP_03464060.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC 43243] gi|217990641|gb|EEC56652.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC 43243] Length = 123 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I + + P+ RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILAEAQVNPDTRVRDLTDEEVAKIRDVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 E D VEGDLRR +AMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART Sbjct: 61 ENDNILVEGDLRRDIAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNART 110 >gi|85060234|ref|YP_455936.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans'] gi|123518717|sp|Q2NQP4|RS13_SODGM RecName: Full=30S ribosomal protein S13 gi|84780754|dbj|BAE75531.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans'] Length = 118 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQHICAATGIAEHVKISELSEEQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 TK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|312140892|ref|YP_004008228.1| 30S ribosomal protein s13 rpsm [Rhodococcus equi 103S] gi|325675470|ref|ZP_08155154.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707] gi|311890231|emb|CBH49549.1| 30S ribosomal protein S13 RpsM [Rhodococcus equi 103S] gi|325553441|gb|EGD23119.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707] Length = 122 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG +S++I + P+ R L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTTSKEILAATGVNPDLRSKDLTDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EESVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|239636209|ref|ZP_04677213.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603] gi|239598225|gb|EEQ80718.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603] gi|330685162|gb|EGG96826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU121] Length = 121 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|167973083|ref|ZP_02555360.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974840|ref|ZP_02557117.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167975997|ref|ZP_02558274.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988496|ref|ZP_02570167.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362009|ref|ZP_02695188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867601|ref|ZP_03079603.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273653|ref|ZP_03206188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554322|ref|YP_002284654.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550772|ref|ZP_03771721.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551259|ref|ZP_03772205.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226712802|sp|B5ZB64|RS13_UREU1 RecName: Full=30S ribosomal protein S13 gi|171903351|gb|EDT49640.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209077|gb|EDU06120.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018818|gb|EDU56858.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997752|gb|EDU66849.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659696|gb|EDX53076.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660658|gb|EDX53913.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249681|gb|EDY74462.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541823|gb|ACI60052.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379074|gb|EEH01439.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379926|gb|EEH02288.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 132 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/118 (57%), Positives = 83/118 (70%), Gaps = 7/118 (5%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57 MARI GV+IP KRVV +L YI GIG +SQ I I RV+ L + ++ +IR Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQKILKLANIDENIRVNDLADEQIAEIRRVA 60 Query: 58 ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +A + Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRK 118 >gi|313904926|ref|ZP_07838297.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6] gi|313470183|gb|EFR65514.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6] Length = 123 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/112 (58%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S + + + P+ RV L + EV + AI Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSTKLLAQAGVNPDTRVRDLTDDEVKSLTNAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ VEGDLRR +AMNIKRL ++GCYRG RHR GLPVRGQ+T TNARTRK Sbjct: 61 EELQVTVEGDLRREIAMNIKRLQEIGCYRGKRHRVGLPVRGQKTKTNARTRK 112 >gi|225020481|ref|ZP_03709673.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii ATCC 33806] gi|305679948|ref|ZP_07402758.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266] gi|224946870|gb|EEG28079.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii ATCC 33806] gi|305660568|gb|EFM50065.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266] Length = 122 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLKETGISPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|161897604|ref|YP_948629.2| 30S ribosomal protein S13 [Arthrobacter aurescens TC1] gi|158706372|sp|A1R8R7|RS13_ARTAT RecName: Full=30S ribosomal protein S13 Length = 125 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L ++E++Q+R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111 >gi|283796528|ref|ZP_06345681.1| 30S ribosomal protein S13 [Clostridium sp. M62/1] gi|291075942|gb|EFE13306.1| 30S ribosomal protein S13 [Clostridium sp. M62/1] gi|295092571|emb|CBK78678.1| 30S ribosomal protein S13 [Clostridium cf. saccharolyticum K10] Length = 122 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASSNRILAEAGVNPDTRVKDLTDDEVKKLAAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK Sbjct: 61 ADTQVVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111 >gi|308178108|ref|YP_003917514.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117] gi|307745571|emb|CBT76543.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117] Length = 124 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ I P+ RV L + +++Q+R + Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETIAATGISPDIRVKDLTDEQLVQLRDFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR V +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK Sbjct: 61 EGTYKVEGDLRREVQADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRK 111 >gi|111220571|ref|YP_711365.1| 30S ribosomal protein S13 [Frankia alni ACN14a] gi|123143523|sp|Q0RRP6|RS13_FRAAA RecName: Full=30S ribosomal protein S13 gi|111148103|emb|CAJ59771.1| 30S ribosomal subunit protein S13 [Frankia alni ACN14a] Length = 126 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S++ + P+ RV L E E++++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRTRSRETLAATGVNPDTRVRDLSEDEIVRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|310941751|dbj|BAJ24229.1| 30S ribosomal protein S13 [Pseudomonas azotoformans] gi|310941961|dbj|BAJ24334.1| 30S ribosomal protein S13 [Pseudomonas fluorescens] Length = 118 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVAGVNPAAKIKDLSDEQIELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|306835267|ref|ZP_07468299.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726] gi|304568860|gb|EFM44393.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726] Length = 122 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + +V +R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGSWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 111 >gi|227509954|ref|ZP_03940003.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512887|ref|ZP_03942936.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577] gi|227523015|ref|ZP_03953064.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290] gi|227083887|gb|EEI19199.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577] gi|227089833|gb|EEI25145.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290] gi|227190560|gb|EEI70627.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 121 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG +S+ I + + + RV L + +IR AI Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIFGIGTSTSEKILAQAGVSEDVRVRDLTPDQEDKIR-AI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK GV R Sbjct: 60 VSDLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKATAGVGR 119 Query: 121 KR 122 ++ Sbjct: 120 RK 121 >gi|257126745|ref|YP_003164859.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b] gi|260891352|ref|ZP_05902615.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254] gi|257050684|gb|ACV39868.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b] gi|260858735|gb|EEX73235.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254] Length = 121 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG +S I I + RV L E +V ++R A+ Sbjct: 1 MARIAGVDIPRNKRVEVSLTYIFGIGRSTSNKILGATGIDRDTRVKDLTEEQVAKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL+D+ YRGLRHR GLPVRGQ+T TNARTRK + +A+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVRMAIAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|227894544|ref|ZP_04012349.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047] gi|227863703|gb|EEJ71124.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047] Length = 116 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|259047531|ref|ZP_05737932.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175] gi|259035722|gb|EEW36977.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175] Length = 121 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +S+ I + + RV +L E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGITTSKQILAAANVNEDTRVRELTNDELDRIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|157690925|ref|YP_001485387.1| 30S ribosomal protein S13 [Bacillus pumilus SAFR-032] gi|194017484|ref|ZP_03056095.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061] gi|166991599|sp|A8F9B0|RS13_BACP2 RecName: Full=30S ribosomal protein S13 gi|157679683|gb|ABV60827.1| ribosomal protein S13 [Bacillus pumilus SAFR-032] gi|194010756|gb|EDW20327.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061] Length = 121 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|296113776|ref|YP_003627714.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4] gi|295921470|gb|ADG61821.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4] gi|326562121|gb|EGE12449.1| 30S ribosomal protein S13 [Moraxella catarrhalis 7169] gi|326564514|gb|EGE14740.1| 30S ribosomal protein S13 [Moraxella catarrhalis 46P47B1] gi|326565697|gb|EGE15860.1| 30S ribosomal protein S13 [Moraxella catarrhalis 12P80B1] gi|326566266|gb|EGE16418.1| 30S ribosomal protein S13 [Moraxella catarrhalis 103P14B1] gi|326567082|gb|EGE17204.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC1] gi|326568346|gb|EGE18426.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC7] gi|326572247|gb|EGE22242.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC8] gi|326574589|gb|EGE24529.1| 30S ribosomal protein S13 [Moraxella catarrhalis O35E] gi|326574845|gb|EGE24775.1| 30S ribosomal protein S13 [Moraxella catarrhalis 101P30B1] gi|326576169|gb|EGE26084.1| 30S ribosomal protein S13 [Moraxella catarrhalis CO72] Length = 118 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +++ I + I ++ L +S++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTTAKQILAAVGIEETTKIGSLDDSQLDAVRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR V+MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK Sbjct: 61 -ANYTVEGDLRREVSMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRK 110 >gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320] gi|194684577|emb|CAR46425.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320] Length = 118 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|30918554|sp|P15757|RS13_BACST RecName: Full=30S ribosomal protein S13; AltName: Full=BS14 Length = 120 Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 2/111 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQ-ILKEAGVSEDTRVRDLTEEELGRIREIV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK Sbjct: 60 GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 109 >gi|302869945|ref|YP_003838582.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029] gi|302572804|gb|ADL49006.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029] Length = 126 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++RV L + E++++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTKTNARTRK 111 >gi|296137042|ref|YP_003644284.1| 30S ribosomal protein S13 [Thiomonas intermedia K12] gi|294341219|emb|CAZ89620.1| 30S ribosomal subunit protein S13 [Thiomonas sp. 3As] gi|295797164|gb|ADG31954.1| 30S ribosomal protein S13 [Thiomonas intermedia K12] Length = 121 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++ IC+ +P +R+ L ++++ ++R+AI Sbjct: 1 MARIAGINIPPHQHSEIGLTAIYGIGRTTARAICDASGVPYNKRIKDLSDADLEKVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK KG + Sbjct: 61 GK-LTIEGDLRREISVNIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGSITL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|238061097|ref|ZP_04605806.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149] gi|237882908|gb|EEP71736.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149] Length = 126 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRK 111 >gi|170718271|ref|YP_001785289.1| 30S ribosomal protein S13 [Haemophilus somnus 2336] gi|168826400|gb|ACA31771.1| ribosomal protein S13 [Haemophilus somnus 2336] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|330447015|ref|ZP_08310665.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491206|dbj|GAA05162.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|251793848|ref|YP_003008580.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700] gi|247535247|gb|ACS98493.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICASAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|255326869|ref|ZP_05367945.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296] gi|283457574|ref|YP_003362157.1| 30S ribosomal protein S13 [Rothia mucilaginosa DY-18] gi|255296086|gb|EET75427.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296] gi|283133572|dbj|BAI64337.1| ribosomal protein S13 [Rothia mucilaginosa DY-18] Length = 122 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + + P+ RV L + E++ +R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|166031633|ref|ZP_02234462.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC 27755] gi|166028610|gb|EDR47367.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC 27755] Length = 139 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 18 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAQAGVNPDIRCRDLTDDDVKKISAVI 77 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK Sbjct: 78 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 128 >gi|315501406|ref|YP_004080293.1| 30S ribosomal protein s13 [Micromonospora sp. L5] gi|315408025|gb|ADU06142.1| 30S ribosomal protein S13 [Micromonospora sp. L5] Length = 126 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++RV L + E++++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRK 111 >gi|313891541|ref|ZP_07825151.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E] gi|329121853|ref|ZP_08250468.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965] gi|313120000|gb|EFR43182.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E] gi|327467791|gb|EGF13283.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965] Length = 125 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ RV L E +V +IR A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTLSKKILAETGVSPDTRVRDLNEDDVAKIRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK Sbjct: 61 GE-YKVEGDLRREESLNIKRLVEIGSYRGRRHRLGLPTRGQRTKTNARTRK 110 >gi|145640898|ref|ZP_01796480.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|145274412|gb|EDK14276.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.4-21] Length = 122 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|313884421|ref|ZP_07818182.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8] gi|312620205|gb|EFR31633.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8] Length = 120 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG K++Q+I + + + RV L E+ +IRQ I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKKTAQNILAEANVSEDTRVKDLTNEELDRIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR + M+IKRL ++G YRGLRHRRGLPVRGQ T NARTRK Sbjct: 61 DG-IKVEGDLRRDIRMDIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110 >gi|113460230|ref|YP_718288.1| 30S ribosomal protein S13 [Haemophilus somnus 129PT] gi|123031100|sp|Q0I140|RS13_HAES1 RecName: Full=30S ribosomal protein S13 gi|112822273|gb|ABI24362.1| SSU ribosomal protein S13P [Haemophilus somnus 129PT] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|306821594|ref|ZP_07455192.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550339|gb|EFM38332.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 122 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ L YI GIG ++S I I R+ L E +V +R+ I Sbjct: 1 MARIAGVDLPRDKRVIIGLTYIFGIGKQTSAKILATTGIDESIRIKDLSEEQVNLLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDL+R +++NIKRL D+ CYRGLRH +GLPVRGQ+T TNARTRK Sbjct: 61 DNNYTVEGDLKREISLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNARTRK 111 >gi|228989343|ref|ZP_04149334.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442] gi|228995526|ref|ZP_04155194.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17] gi|229003151|ref|ZP_04160997.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4] gi|228758114|gb|EEM07313.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4] gi|228764255|gb|EEM13134.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17] gi|228770421|gb|EEM18994.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442] Length = 121 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK Sbjct: 61 DR-VKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110 >gi|152978163|ref|YP_001343792.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z] gi|150839886|gb|ABR73857.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQTICAAAGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|68249395|ref|YP_248507.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP] gi|145628306|ref|ZP_01784107.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21] gi|145630546|ref|ZP_01786326.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|145632158|ref|ZP_01787893.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655] gi|145634789|ref|ZP_01790497.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA] gi|145638399|ref|ZP_01794009.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII] gi|148826556|ref|YP_001291309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE] gi|148827988|ref|YP_001292741.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG] gi|229844667|ref|ZP_04464806.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1] gi|229845850|ref|ZP_04465962.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1] gi|260579891|ref|ZP_05847721.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW] gi|260581616|ref|ZP_05849413.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127] gi|319775266|ref|YP_004137754.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047] gi|319897706|ref|YP_004135903.1| 30S ribosomal subunit protein s13 [Haemophilus influenzae F3031] gi|81336178|sp|Q4QMA0|RS13_HAEI8 RecName: Full=30S ribosomal protein S13 gi|158706235|sp|A5UDS5|RS13_HAEIE RecName: Full=30S ribosomal protein S13 gi|158706236|sp|A5UHV2|RS13_HAEIG RecName: Full=30S ribosomal protein S13 gi|68057594|gb|AAX87847.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP] gi|144980081|gb|EDJ89740.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21] gi|144983936|gb|EDJ91378.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|144987065|gb|EDJ93595.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655] gi|145267955|gb|EDK07951.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA] gi|145272728|gb|EDK12635.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII] gi|148716716|gb|ABQ98926.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE] gi|148719230|gb|ABR00358.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG] gi|229810854|gb|EEP46571.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1] gi|229812381|gb|EEP48071.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1] gi|260093175|gb|EEW77108.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW] gi|260095209|gb|EEW79100.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127] gi|301169518|emb|CBW29119.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae 10810] gi|309751539|gb|ADO81523.1| 30S ribosomal protein S13 [Haemophilus influenzae R2866] gi|309973709|gb|ADO96910.1| 30S ribosomal protein S13 [Haemophilus influenzae R2846] gi|317433212|emb|CBY81587.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3031] gi|317449857|emb|CBY86068.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047] Length = 118 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|126176333|ref|YP_001052482.1| 30S ribosomal protein S13 [Shewanella baltica OS155] gi|152998771|ref|YP_001364452.1| 30S ribosomal protein S13 [Shewanella baltica OS185] gi|160873347|ref|YP_001552663.1| 30S ribosomal protein S13 [Shewanella baltica OS195] gi|217975179|ref|YP_002359930.1| 30S ribosomal protein S13 [Shewanella baltica OS223] gi|304412786|ref|ZP_07394388.1| 30S ribosomal protein S13 [Shewanella baltica OS183] gi|307307450|ref|ZP_07587185.1| 30S ribosomal protein S13 [Shewanella baltica BA175] gi|166231923|sp|A3DA50|RS13_SHEB5 RecName: Full=30S ribosomal protein S13 gi|166231924|sp|A6WHV0|RS13_SHEB8 RecName: Full=30S ribosomal protein S13 gi|189044294|sp|A9KWC3|RS13_SHEB9 RecName: Full=30S ribosomal protein S13 gi|254811164|sp|B8EBI3|RS13_SHEB2 RecName: Full=30S ribosomal protein S13 gi|125999538|gb|ABN63613.1| SSU ribosomal protein S13P [Shewanella baltica OS155] gi|151363389|gb|ABS06389.1| ribosomal protein S13 [Shewanella baltica OS185] gi|160858869|gb|ABX47403.1| ribosomal protein S13 [Shewanella baltica OS195] gi|217500314|gb|ACK48507.1| ribosomal protein S13 [Shewanella baltica OS223] gi|304348866|gb|EFM13282.1| 30S ribosomal protein S13 [Shewanella baltica OS183] gi|306910238|gb|EFN40671.1| 30S ribosomal protein S13 [Shewanella baltica BA175] gi|315265575|gb|ADT92428.1| 30S ribosomal protein S13 [Shewanella baltica OS678] Length = 118 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|327438301|dbj|BAK14666.1| ribosomal protein S13 [Solibacillus silvestris StLB046] Length = 121 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +SQ + I RV L E ++ QIR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKTTSQKVLAGAGIDENTRVKDLTEDQLNQIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+ EGDLRR V++NIKRLM++ RG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-YKTEGDLRREVSLNIKRLMEIASNRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|226305367|ref|YP_002765325.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4] gi|229489477|ref|ZP_04383340.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121] gi|259494688|sp|C0ZW51|RS13_RHOE4 RecName: Full=30S ribosomal protein S13 gi|226184482|dbj|BAH32586.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4] gi|229323574|gb|EEN89332.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121] Length = 124 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 84/111 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KR+ AL YI+GIG S++I + + P+ R L + ++ ++R+ I Sbjct: 1 MARLSGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|330432102|gb|AEC17161.1| 30S ribosomal protein S13 [Gallibacterium anatis UMN179] Length = 118 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC+ + I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRAQHICDAVGIAGSVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|111115329|ref|YP_709947.1| 30S ribosomal protein S13 [Borrelia afzelii PKo] gi|122956352|sp|Q0SN07|RS13_BORAP RecName: Full=30S ribosomal protein S13 gi|110890603|gb|ABH01771.1| ribosomal protein S13 [Borrelia afzelii PKo] Length = 125 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK I + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISSSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111 >gi|78484661|ref|YP_390586.1| 30S ribosomal protein S13 [Thiomicrospira crunogena XCL-2] gi|91207630|sp|Q31IW1|RS13_THICR RecName: Full=30S ribosomal protein S13 gi|78362947|gb|ABB40912.1| SSU ribosomal protein S13P [Thiomicrospira crunogena XCL-2] Length = 118 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +V L I+G+G ++Q IC + I P +V +L E ++ +R + Sbjct: 1 MARIAGVNIPVNKHIVIGLRSIYGVGQTTAQKICADVNIDPTTKVRELTEEQLEALRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++EGDLRR V MNIKRLMD+GCYRG+RHRR LP+RGQRT NARTRK Sbjct: 61 TK-FKIEGDLRRDVTMNIKRLMDMGCYRGIRHRRSLPLRGQRTKNNARTRK 110 >gi|297537553|ref|YP_003673322.1| 30S ribosomal protein S13 [Methylotenera sp. 301] gi|297256900|gb|ADI28745.1| 30S ribosomal protein S13 [Methylotenera sp. 301] Length = 120 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I GIG ++Q IC + ++ L +++V ++R + Sbjct: 1 MARIAGVNIPNNKHADVALTAIFGIGRVTAQKICAAAGVLATTKMKDLNDADVDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AKE-KVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110 >gi|261867276|ref|YP_003255198.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412608|gb|ACX81979.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D11S-1] gi|301155352|emb|CBW14818.1| 30S ribosomal subunit protein S13 [Haemophilus parainfluenzae T3T1] Length = 118 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|260102379|ref|ZP_05752616.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075] gi|260083823|gb|EEW67943.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075] gi|323465846|gb|ADX69533.1| 30S ribosomal protein S13 [Lactobacillus helveticus H10] gi|328463388|gb|EGF35061.1| 30S ribosomal protein S13 [Lactobacillus helveticus MTCC 5463] Length = 116 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|70725827|ref|YP_252741.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435] gi|82581615|sp|Q4L890|RS13_STAHJ RecName: Full=30S ribosomal protein S13 gi|68446551|dbj|BAE04135.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435] Length = 121 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|269218965|ref|ZP_06162819.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212076|gb|EEZ78416.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. F0332] Length = 123 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI+GIG S + I P+ RV L E +++ +++ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIYGIGRTRSAETLAATGISPDVRVRDLTEDQLVALKKHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DENYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|315037554|ref|YP_004031122.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112] gi|325956027|ref|YP_004286637.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC] gi|312275687|gb|ADQ58327.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112] gi|325332592|gb|ADZ06500.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC] gi|327182850|gb|AEA31297.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1118] Length = 116 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDTTAKKICADAGVSEDVRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|167945793|ref|ZP_02532867.1| 30S ribosomal protein S13 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 118 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + AL I+G+G + IC I P ++ +L E+++ IR + Sbjct: 1 MARIAGVNIPDRKHAIIALTSIYGVGRTRAAGICEATGIAPSTKILELSEAQLEAIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGC RG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMNIKRLMDLGCNRGIRHRRGLPLRGQRTKTNARTRK 110 >gi|160941045|ref|ZP_02088383.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC BAA-613] gi|158435994|gb|EDP13761.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC BAA-613] Length = 122 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 77/109 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASSNRILTAAGVNPDTRVKDLTDDEVKKLANTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART Sbjct: 61 AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109 >gi|161506896|ref|YP_001576850.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571] gi|172048386|sp|A8YXM8|RS13_LACH4 RecName: Full=30S ribosomal protein S13 gi|160347885|gb|ABX26559.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571] Length = 116 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGNATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|13507928|ref|NP_109877.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae M129] gi|2500457|sp|Q50297|RS13_MYCPN RecName: Full=30S ribosomal protein S13 gi|1215699|gb|AAC43692.1| RpsM [Mycoplasma pneumoniae] gi|1674347|gb|AAB96290.1| ribosomal protein S13 [Mycoplasma pneumoniae M129] gi|301633191|gb|ADK86745.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae FH] Length = 124 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KR+ AL YI GIG SQ I + I P++RV L E E + IR + Sbjct: 1 MARILGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFVAIRN-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EGDLRR +A+NIK L ++G +RGLRHR+ LPVRGQRT TNARTRK Sbjct: 60 ASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRTNARTRK 110 >gi|15639203|ref|NP_218650.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025444|ref|YP_001933216.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14] gi|6094154|sp|O83240|RS13_TREPA RecName: Full=30S ribosomal protein S13 gi|226712800|sp|B2S2F8|RS13_TREPS RecName: Full=30S ribosomal protein S13 gi|3322479|gb|AAC65199.1| ribosomal protein S13 (rpsM) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018019|gb|ACD70637.1| ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14] gi|291059615|gb|ADD72350.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str. Chicago] Length = 121 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GI S++ IC K I ++ L + E+ +R I Sbjct: 1 MARIAGVDLPN-KHVSVALTYIYGISRSSARTICEKARISSACLINDLSQDELAVVRAII 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK Sbjct: 60 DREYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRK 110 >gi|13357815|ref|NP_078089.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167971971|ref|ZP_02554248.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282409|ref|ZP_02690076.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|168308562|ref|ZP_02691237.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|170762081|ref|YP_001752338.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|32363424|sp|Q9PQN6|RS13_UREPA RecName: Full=30S ribosomal protein S13 gi|189044304|sp|B1AIP4|RS13_UREP2 RecName: Full=30S ribosomal protein S13 gi|11276601|pir||H82917 ribosomal protein S13 UU255 [imported] - Ureaplasma urealyticum gi|6899225|gb|AAF30664.1|AE002122_33 ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827658|gb|ACA32920.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902711|gb|EDT49000.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675722|gb|EDT87627.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700675|gb|EDU18957.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 132 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 68/118 (57%), Positives = 82/118 (69%), Gaps = 7/118 (5%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57 MARI GV+IP KRVV +L YI GIG +SQ I I RV L + ++ +IR Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60 Query: 58 ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +A + Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRK 118 >gi|256831851|ref|YP_003160578.1| 30S ribosomal protein S13 [Jonesia denitrificans DSM 20603] gi|256685382|gb|ACV08275.1| ribosomal protein S13 [Jonesia denitrificans DSM 20603] Length = 124 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+G+G +Q I P+ RV L ++E++ +R + Sbjct: 1 MARLIGVDLPRDKRVEVALTYIYGVGRTRAQQTLEATGISPDVRVKDLGDTELVALRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|37528522|ref|NP_931867.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp. laumondii TTO1] gi|253991667|ref|YP_003043023.1| 30S ribosomal protein S13 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|81418034|sp|Q7MYH2|RS13_PHOLL RecName: Full=30S ribosomal protein S13 gi|36787960|emb|CAE17077.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp. laumondii TTO1] gi|253783117|emb|CAQ86282.1| 30s ribosomal subunit protein s13 [Photorhabdus asymbiotica] Length = 118 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAEHVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|212697277|ref|ZP_03305405.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM 7454] gi|325848813|ref|ZP_08170323.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675726|gb|EEB35333.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM 7454] gi|325480457|gb|EGC83519.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 113 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG S+Q+I K I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY +EGDLRR V+MNI+ L ++ CYRGLRH++GLPVRGQ T NARTRK Sbjct: 61 D-DYTIEGDLRREVSMNIRNLREINCYRGLRHKKGLPVRGQNTKNNARTRK 110 >gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577841|ref|YP_002236301.1| ribosomal protein S13 [Klebsiella pneumoniae 342] gi|238896795|ref|YP_002921540.1| 30S ribosomal protein S13 [Klebsiella pneumoniae NTUH-K2044] gi|288933288|ref|YP_003437347.1| 30S ribosomal protein S13 [Klebsiella variicola At-22] gi|166231913|sp|A6TEV1|RS13_KLEP7 RecName: Full=30S ribosomal protein S13 gi|226712749|sp|B5XNB4|RS13_KLEP3 RecName: Full=30S ribosomal protein S13 gi|150957055|gb|ABR79085.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566899|gb|ACI08675.1| ribosomal protein S13 [Klebsiella pneumoniae 342] gi|238549122|dbj|BAH65473.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888017|gb|ADC56335.1| 30S ribosomal protein S13 [Klebsiella variicola At-22] Length = 118 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC + I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|254785101|ref|YP_003072529.1| 30S ribosomal protein S13 [Teredinibacter turnerae T7901] gi|259494692|sp|C5BQ83|RS13_TERTT RecName: Full=30S ribosomal protein S13 gi|237684688|gb|ACR11952.1| ribosomal protein S13 [Teredinibacter turnerae T7901] Length = 118 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y+ GIG +++ IC + ++ L ++++ +IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVFGIGKTTAKQICAATGVAESTKISALDDAKMDEIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK Sbjct: 61 AK-HTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRK 110 >gi|239623372|ref|ZP_04666403.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522338|gb|EEQ62204.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 122 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 78/109 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKKLATII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART Sbjct: 61 AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109 >gi|121609263|ref|YP_997070.1| 30S ribosomal protein S13 [Verminephrobacter eiseniae EF01-2] gi|158706293|sp|A1WK95|RS13_VEREI RecName: Full=30S ribosomal protein S13 gi|121553903|gb|ABM58052.1| SSU ribosomal protein S13P [Verminephrobacter eiseniae EF01-2] Length = 121 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC+ I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRNRARKICDASGIAYSKKIKDLTDGDLEKIRVQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ + +EGDLRR MNIKRLMD+GCYRG RHRRGLPVRGQRT TNARTRK KG A Sbjct: 61 EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|29831494|ref|NP_826128.1| 30S ribosomal protein S13 [Streptomyces avermitilis MA-4680] gi|32363228|sp|P59756|RS13_STRAW RecName: Full=30S ribosomal protein S13 gi|29608610|dbj|BAC72663.1| putative ribosomal protein S13 [Streptomyces avermitilis MA-4680] Length = 126 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + + P RV L E E+++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQKTLAETGVNPNTRVRDLSEEELVRIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++ EGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNFKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|282898336|ref|ZP_06306327.1| Ribosomal protein S13 [Raphidiopsis brookii D9] gi|281196867|gb|EFA71772.1| Ribosomal protein S13 [Raphidiopsis brookii D9] Length = 126 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/101 (60%), Positives = 75/101 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + SQDI + P+ RV L ++++ +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 101 >gi|119029440|gb|ABL59937.1| 30S ribosomal protein S13 [uncultured bacterium] Length = 119 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 69/116 (59%), Positives = 81/116 (69%), Gaps = 3/116 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVNIP K V L I+GIG S+ IC + P+ +V L E E+ +IR I Sbjct: 1 MARIVGVNIPVKKHVEIGLTSIYGIGRVSASKICQVAGVNPQTKVGSLTEEELDKIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + Y EGDLRR VAMN+KRL+++G YRGLRHRRGLPVRGQRT TNARTRK GKG Sbjct: 61 NK-YTTEGDLRREVAMNVKRLIEIGAYRGLRHRRGLPVRGQRTKTNARTRK--GKG 113 >gi|33152932|ref|NP_874285.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP] gi|71153725|sp|Q7VKF5|RS13_HAEDU RecName: Full=30S ribosomal protein S13 gi|33149157|gb|AAP96674.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP] Length = 118 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICVATGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 SK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|229917333|ref|YP_002885979.1| ribosomal protein S13 [Exiguobacterium sp. AT1b] gi|259494678|sp|C4KZM1|RS13_EXISA RecName: Full=30S ribosomal protein S13 gi|229468762|gb|ACQ70534.1| ribosomal protein S13 [Exiguobacterium sp. AT1b] Length = 121 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L YI+GIG +Q+I + E R L E E+ +IR+AI Sbjct: 1 MARIAGVDIPREKRIVISLTYIYGIGKTKAQEILKAANVSEETRTRDLTEDELNRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ T N+RTRK Sbjct: 61 D-GIKVEGDLRREVSLNIKRLIEIGAYRGIRHRRSLPVRGQNTKNNSRTRK 110 >gi|223042524|ref|ZP_03612573.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14] gi|242371873|ref|ZP_04817447.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1] gi|314934274|ref|ZP_07841633.1| 30S ribosomal protein S13 [Staphylococcus caprae C87] gi|222444187|gb|EEE50283.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14] gi|242350380|gb|EES41981.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1] gi|313652204|gb|EFS15967.1| 30S ribosomal protein S13 [Staphylococcus caprae C87] Length = 121 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|153871950|ref|ZP_02000983.1| Ribosomal protein S13 [Beggiatoa sp. PS] gi|152071586|gb|EDN69019.1| Ribosomal protein S13 [Beggiatoa sp. PS] Length = 118 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+ K + L I+GIG K ++ IC +I P ++ L + + +R + Sbjct: 1 MARIAGINLSGHKHTIIGLTSIYGIGRKLAEKICEATSIDPSMKIKDLSDKNLETLRHEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR VAMNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-YDVEGDLRREVAMNIKRLMDLGCYRGMRHRRGLPLRGQRTRTNARTRK 110 >gi|300362366|ref|ZP_07058542.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03] gi|300353357|gb|EFJ69229.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03] Length = 115 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC I + R + L + ++R + Sbjct: 1 MARIAGVDLPRNKRVVVALTYIYGIGESTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|288919687|ref|ZP_06414014.1| ribosomal protein S13 [Frankia sp. EUN1f] gi|288348876|gb|EFC83126.1| ribosomal protein S13 [Frankia sp. EUN1f] Length = 126 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S++ + P+ RV L + EV ++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSKETLAATGVNPDTRVRDLTDEEVQKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|90416838|ref|ZP_01224767.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207] gi|90331185|gb|EAS46429.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207] Length = 118 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y+ GIG +++ IC + I + ++ L E+++ +R A+ Sbjct: 1 MARIAGVNIPDNKHAVISLTYVFGIGRPTARKICADVGIAEDTKIAALDEAQLDLLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GTN-EVEGDLRRENSMNIKRLMDLGCYRGLRHRRNLPVRGQRTKTNARTRK 110 >gi|311070789|ref|YP_003975712.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942] gi|310871306|gb|ADP34781.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942] Length = 121 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|59710866|ref|YP_203642.1| 30S ribosomal protein S13 [Vibrio fischeri ES114] gi|197333946|ref|YP_002155018.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11] gi|75354725|sp|Q5E892|RS13_VIBF1 RecName: Full=30S ribosomal protein S13 gi|59478967|gb|AAW84754.1| 30S ribosomal subunit protein S13 [Vibrio fischeri ES114] gi|197315436|gb|ACH64883.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11] Length = 118 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L + ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELNDEQIDILRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|255324776|ref|ZP_05365890.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum SK141] gi|311740033|ref|ZP_07713867.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC 33035] gi|255298251|gb|EET77554.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum SK141] gi|311305106|gb|EFQ81175.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC 33035] Length = 122 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 111 >gi|329118618|ref|ZP_08247322.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200] gi|327465353|gb|EGF11634.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200] Length = 120 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGNSRAKLICEMTGIIPSTKVKDLDESQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRK 110 >gi|317505826|ref|ZP_07963671.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974] gi|316255908|gb|EFV15133.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974] Length = 124 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + P+ R L + +V +R+ I Sbjct: 1 MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDGDVAVLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|58336653|ref|YP_193238.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM] gi|227903211|ref|ZP_04021016.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796] gi|75358065|sp|Q5FM67|RS13_LACAC RecName: Full=30S ribosomal protein S13 gi|58253970|gb|AAV42207.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM] gi|227869016|gb|EEJ76437.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796] Length = 116 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|296282605|ref|ZP_06860603.1| 30S ribosomal protein S13 [Citromicrobium bathyomarinum JL354] Length = 108 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/105 (60%), Positives = 77/105 (73%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YIHGIG + +I +KL I + RV L + EV++IR+ I++++ VEGDLRR AMN Sbjct: 4 ALTYIHGIGRTKAVEIADKLGIDHKTRVQDLTDEEVLRIRETIDEEHTVEGDLRRQTAMN 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 IKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K +K+ Sbjct: 64 IKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGKKK 108 >gi|126666791|ref|ZP_01737768.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17] gi|126628836|gb|EAZ99456.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17] Length = 118 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHVVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLTDEQLESLRTDV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK Sbjct: 61 IKG-SVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110 >gi|145636642|ref|ZP_01792309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH] gi|145270168|gb|EDK10104.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH] Length = 118 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICVAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|221307954|ref|ZP_03589801.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|221312275|ref|ZP_03594080.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317209|ref|ZP_03598503.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321472|ref|ZP_03602766.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767034|ref|NP_388022.2| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|321313813|ref|YP_004206100.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5] gi|1173195|sp|P20282|RS13_BACSU RecName: Full=30S ribosomal protein S13; AltName: Full=BS14 gi|1044989|gb|AAB06824.1| ribosomal protein S13 [Bacillus subtilis] gi|225184661|emb|CAB11917.2| ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|291482513|dbj|BAI83588.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. natto BEST195] gi|320020087|gb|ADV95073.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5] Length = 121 Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|39938711|ref|NP_950477.1| 30S ribosomal protein S13 [Onion yellows phytoplasma OY-M] gi|81402506|sp|Q6YQZ7|RS13_ONYPE RecName: Full=30S ribosomal protein S13 gi|39721820|dbj|BAD04310.1| ribosomal protein S13 [Onion yellows phytoplasma OY-M] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K S I N+L I RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELNIDQNIRVKNLTEQQLSALRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K Sbjct: 61 TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVK 110 >gi|119358167|ref|YP_912811.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides DSM 266] gi|158706222|sp|A1BJ10|RS13_CHLPD RecName: Full=30S ribosomal protein S13 gi|119355516|gb|ABL66387.1| SSU ribosomal protein S13P [Chlorobium phaeobacteroides DSM 266] Length = 125 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S++ I + I PER++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTSAKSILQRAGIAPERKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 DYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110 >gi|228474843|ref|ZP_04059574.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119] gi|314935855|ref|ZP_07843207.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis C80] gi|228271506|gb|EEK12874.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119] gi|313656420|gb|EFS20160.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis C80] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DG-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|154684659|ref|YP_001419820.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens FZB42] gi|296333138|ref|ZP_06875592.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672841|ref|YP_003864512.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str. W23] gi|308172032|ref|YP_003918737.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7] gi|166231898|sp|A7Z0R3|RS13_BACA2 RecName: Full=30S ribosomal protein S13 gi|154350510|gb|ABS72589.1| RpsM [Bacillus amyloliquefaciens FZB42] gi|296149754|gb|EFG90649.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411084|gb|ADM36202.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str. W23] gi|307604896|emb|CBI41267.1| ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7] gi|328551842|gb|AEB22334.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens TA208] gi|328910099|gb|AEB61695.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens LL3] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|160902231|ref|YP_001567812.1| ribosomal protein S13 [Petrotoga mobilis SJ95] gi|189044285|sp|A9BFZ3|RS13_PETMO RecName: Full=30S ribosomal protein S13 gi|160359875|gb|ABX31489.1| ribosomal protein S13 [Petrotoga mobilis SJ95] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K + L YI+GIG K++ DI N L I P +R +L + E+ ++ I Sbjct: 1 MARILGVEVPDNKALFVGLTYIYGIGRKTALDILNNLEIDPNKRAKELTDDEISRLSHHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y+VEG+LR+ + NIKRL+D+G YRG RH+ GLPVRGQ+TH+NARTRK Sbjct: 61 NENYKVEGELRQEINKNIKRLIDIGSYRGKRHKAGLPVRGQKTHSNARTRK 111 >gi|199598856|ref|ZP_03212267.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001] gi|229552731|ref|ZP_04441456.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1] gi|258509458|ref|YP_003172209.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG] gi|258540656|ref|YP_003175155.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus Lc 705] gi|199590268|gb|EDY98363.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001] gi|229313937|gb|EEN79910.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1] gi|257149385|emb|CAR88358.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus GG] gi|257152332|emb|CAR91304.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus Lc 705] gi|259650737|dbj|BAI42899.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|142461|gb|AAA22215.1| ribosomal protein S13 [Bacillus subtilis] Length = 121 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGTYRGIRHRRGLPVRGQNSKNNARTRK 110 >gi|189347679|ref|YP_001944208.1| 30S ribosomal protein S13 [Chlorobium limicola DSM 245] gi|226712711|sp|B3EGW6|RS13_CHLL2 RecName: Full=30S ribosomal protein S13 gi|189341826|gb|ACD91229.1| ribosomal protein S13 [Chlorobium limicola DSM 245] Length = 125 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 62/109 (56%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I PER++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRTSAENILQRAGIAPERKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 DYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110 >gi|229821595|ref|YP_002883121.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333] gi|259494668|sp|C5C0G3|RS13_BEUC1 RecName: Full=30S ribosomal protein S13 gi|229567508|gb|ACQ81359.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333] Length = 126 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G + D I P+ RV L ++E++ +R + Sbjct: 1 MARLVGVDLPRDKRLEVALTYIYGVGRTRAADTLKATGISPDLRVKDLGDAEIVALRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYKIEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|119950852|gb|ABM09763.1| ribosomal protein S13p/S18e [Arthrobacter aurescens TC1] Length = 164 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L ++E++Q+R I Sbjct: 40 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 99 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK Sbjct: 100 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 150 >gi|310659477|ref|YP_003937198.1| 30S ribosomal protein S13 [Clostridium sticklandii DSM 519] gi|308826255|emb|CBH22293.1| 30S ribosomal subunit protein S13 [Clostridium sticklandii] Length = 122 Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ L YI GIG +S I + I R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPREKRVIIGLTYIFGIGKNTSAQILSATGINESTRIKDLTEEEVNLLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK Sbjct: 61 D-NYNVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRK 110 >gi|117619798|ref|YP_854864.1| 30S ribosomal protein S13 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|145300913|ref|YP_001143754.1| 30S ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida A449] gi|330827904|ref|YP_004390856.1| 30S ribosomal protein S13 [Aeromonas veronii B565] gi|158706212|sp|A0KF42|RS13_AERHH RecName: Full=30S ribosomal protein S13 gi|158706213|sp|A4SSY4|RS13_AERS4 RecName: Full=30S ribosomal protein S13 gi|117561205|gb|ABK38153.1| ribosomal protein S13p/S18e [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|142853685|gb|ABO92006.1| ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida A449] gi|328803040|gb|AEB48239.1| 30S ribosomal protein S13 [Aeromonas veronii B565] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ IC I ++ L E+++ +R+ + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGRTRSKAICAAAGIAENVKIKDLDEAQIESLREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRRQISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|42526301|ref|NP_971399.1| 30S ribosomal protein S13 [Treponema denticola ATCC 35405] gi|81570369|sp|Q73PL0|RS13_TREDE RecName: Full=30S ribosomal protein S13 gi|41816413|gb|AAS11280.1| ribosomal protein S13 [Treponema denticola ATCC 35405] gi|325473244|gb|EGC76439.1| 30S ribosomal protein S13 [Treponema denticola F0402] Length = 121 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V +L YI+GI S+ IC + P ++++ L E+E+ IR+ I Sbjct: 1 MARIAGVDLPN-KHVNVSLTYIYGISTSSANKICEATKVDPMKKMNDLDEAELAAIREVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 +++Y+VEG LR VA+NIKRL D+GCYRG RHR+GLPVRGQRT TNARTR Sbjct: 60 DREYKVEGRLRTEVALNIKRLQDIGCYRGQRHRKGLPVRGQRTRTNARTR 109 >gi|262370556|ref|ZP_06063881.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046] gi|262314356|gb|EEY95398.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILAAVGIAPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|237653973|ref|YP_002890287.1| 30S ribosomal protein S13 [Thauera sp. MZ1T] gi|237625220|gb|ACR01910.1| ribosomal protein S13 [Thauera sp. MZ1T] Length = 120 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ I ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGIVRSVKIKDLTESDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110 >gi|123444076|ref|YP_001008046.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238752669|ref|ZP_04614140.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380] gi|238754194|ref|ZP_04615552.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473] gi|238758782|ref|ZP_04619956.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236] gi|238783186|ref|ZP_04627212.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970] gi|238788890|ref|ZP_04632680.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641] gi|238792957|ref|ZP_04636587.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909] gi|238797221|ref|ZP_04640722.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969] gi|332163239|ref|YP_004299816.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|158706295|sp|A1JS04|RS13_YERE8 RecName: Full=30S ribosomal protein S13 gi|122091037|emb|CAL13920.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238703079|gb|EEP95622.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236] gi|238707690|gb|EEQ00050.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473] gi|238709096|gb|EEQ01343.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380] gi|238715982|gb|EEQ07968.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970] gi|238718858|gb|EEQ10673.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969] gi|238722917|gb|EEQ14567.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641] gi|238727811|gb|EEQ19335.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909] gi|318607723|emb|CBY29221.1| SSU ribosomal protein S13p (S18e) [Yersinia enterocolitica subsp. palearctica Y11] gi|325667469|gb|ADZ44113.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861832|emb|CBX72003.1| 30S ribosomal protein S13 [Yersinia enterocolitica W22703] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|290958126|ref|YP_003489308.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22] gi|260647652|emb|CBG70757.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22] Length = 126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ+ + P+ RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEVALTYVFGIGRTLSQETLAATGVNPDTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|145596409|ref|YP_001160706.1| 30S ribosomal protein S13 [Salinispora tropica CNB-440] gi|189044293|sp|A4XBM1|RS13_SALTO RecName: Full=30S ribosomal protein S13 gi|145305746|gb|ABP56328.1| SSU ribosomal protein S13P [Salinispora tropica CNB-440] Length = 126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK Sbjct: 61 ETNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRK 111 >gi|261415796|ref|YP_003249479.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372252|gb|ACX74997.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328112|gb|ADL27313.1| ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 122 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ K V L I+G+G ++ +C +L I ++ L E E +IR + Sbjct: 1 MARIAGVDLPKNKTVEYGLTAIYGVGLFTANKVCAQLGIDKNKKCDDLTEEEQGKIRHLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y VEG LR V +NIKRL D+GCYRG+RHR+GLPVRGQR+ TNARTRK Sbjct: 61 EDEYSVEGQLRAEVTLNIKRLQDIGCYRGIRHRKGLPVRGQRSRTNARTRK 111 >gi|148652259|ref|YP_001279352.1| 30S ribosomal protein S13 [Psychrobacter sp. PRwf-1] gi|172048488|sp|A5WCL1|RS13_PSYWF RecName: Full=30S ribosomal protein S13 gi|148571343|gb|ABQ93402.1| SSU ribosomal protein S13P [Psychrobacter sp. PRwf-1] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +++ I + + I P ++ QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTTAKKILDTVGIAPTTKISQLDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK Sbjct: 61 -GNYMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110 >gi|322831094|ref|YP_004211121.1| 30S ribosomal protein S13 [Rahnella sp. Y9602] gi|321166295|gb|ADW71994.1| 30S ribosomal protein S13 [Rahnella sp. Y9602] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQSICAASGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FIVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|289641141|ref|ZP_06473309.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata] gi|289509082|gb|EFD30013.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata] Length = 126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S + + P+ RV L + E++++R+ I Sbjct: 1 MARLSGVDLPRDKRVEIALTYIFGIGRSRSLETLAATGVNPDTRVQDLTDEEIVRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDL R V +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DANYRVEGDLHREVRQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|297201754|ref|ZP_06919151.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083] gi|197710871|gb|EDY54905.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083] Length = 126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + I P RV L E E++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEVALTYVFGIGRTLSQLTLAETGINPNTRVRDLSEEELVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNLKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|119899683|ref|YP_934896.1| 30S ribosomal protein S13 [Azoarcus sp. BH72] gi|158706334|sp|A1KB04|RS13_AZOSB RecName: Full=30S ribosomal protein S13 gi|119672096|emb|CAL96010.1| 30S ribosomal protein S13 [Azoarcus sp. BH72] Length = 120 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ + ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGVVRSAKIKDLTESDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 GR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110 >gi|320540704|ref|ZP_08040322.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson] gi|320029234|gb|EFW11295.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson] Length = 107 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNAR Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNAR 107 >gi|262377290|ref|ZP_06070514.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145] gi|262307743|gb|EEY88882.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +S+ I I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTSKAILAAAGIAPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|171060596|ref|YP_001792945.1| 30S ribosomal protein S13 [Leptothrix cholodnii SP-6] gi|226712756|sp|B1Y8B4|RS13_LEPCP RecName: Full=30S ribosomal protein S13 gi|170778041|gb|ACB36180.1| ribosomal protein S13 [Leptothrix cholodnii SP-6] Length = 121 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+G+G ++Q IC I ++V L +S++ +IR+ + Sbjct: 1 MARIAGINIPPHKHAEIGLTSIYGVGRTTAQKICEACGIAYNKKVKDLDDSDLEKIREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TN+RTRK KG A Sbjct: 61 GR-LTIEGDLRREISINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNSRTRKGPKKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|308048013|ref|YP_003911579.1| 30S ribosomal protein S13P [Ferrimonas balearica DSM 9799] gi|307630203|gb|ADN74505.1| SSU ribosomal protein S13P [Ferrimonas balearica DSM 9799] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC + I + + L E+ + ++R+ + Sbjct: 1 MARIAGINIPEHKHAVVALTAIFGIGQTRAKAICVEAGIAEDVKFKDLDEATIDKVREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + VEGDLRR ++MNIKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GQ-FTVEGDLRREISMNIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|256844453|ref|ZP_05549939.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN] gi|262047175|ref|ZP_06020133.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US] gi|293380400|ref|ZP_06626471.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1] gi|295692183|ref|YP_003600793.1| 30S ribosomal protein s13 [Lactobacillus crispatus ST1] gi|256613531|gb|EEU18734.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN] gi|260572420|gb|EEX28982.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US] gi|290923083|gb|EFE00015.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1] gi|295030289|emb|CBL49768.1| 30S ribosomal protein S13 [Lactobacillus crispatus ST1] Length = 116 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|256544530|ref|ZP_05471903.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170] gi|256399855|gb|EEU13459.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170] Length = 113 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG S+Q+I K I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY +EGDLRR V+MNI+ L ++ CYRG+RH+RGLPVRGQ T NARTRK Sbjct: 61 D-DYTIEGDLRREVSMNIRNLREINCYRGIRHKRGLPVRGQNTKNNARTRK 110 >gi|303234802|ref|ZP_07321428.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4] gi|302494143|gb|EFL53923.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4] Length = 116 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110 >gi|167767779|ref|ZP_02439832.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1] gi|317497070|ref|ZP_07955397.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710518|gb|EDS21097.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1] gi|291558880|emb|CBL37680.1| 30S ribosomal protein S13 [butyrate-producing bacterium SSC/2] gi|316895615|gb|EFV17770.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA] Length = 122 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S++ I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLSSAKRILAEANVDPDTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR +A+NIKRL ++GCYRG RHR+GLP RGQ+T TNARTRK Sbjct: 61 NDTQVVEGDLRREIALNIKRLKEIGCYRGKRHRQGLPCRGQKTKTNARTRK 111 >gi|134096299|ref|YP_001101374.1| 30S ribosomal protein S13 [Herminiimonas arsenicoxydans] gi|158706238|sp|A4G9R6|RS13_HERAR RecName: Full=30S ribosomal protein S13 gi|133740202|emb|CAL63253.1| 30S ribosomal subunit protein S13 [Herminiimonas arsenicoxydans] Length = 121 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG +Q IC+ + ++V L +SE+ ++R I Sbjct: 1 MARIAGVNVPNHQHTVIGLTAIYGIGRPRAQKICDATGVLTTKKVKDLDDSELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK Sbjct: 61 AK-FIVEGDLRREISMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRK 110 >gi|159039808|ref|YP_001539061.1| 30S ribosomal protein S13 [Salinispora arenicola CNS-205] gi|189044292|sp|A8M503|RS13_SALAI RecName: Full=30S ribosomal protein S13 gi|157918643|gb|ABW00071.1| ribosomal protein S13 [Salinispora arenicola CNS-205] Length = 126 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRK 111 >gi|198282661|ref|YP_002218982.1| 30S ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667353|ref|YP_002424854.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226712683|sp|B7J4A1|RS13_ACIF2 RecName: Full=30S ribosomal protein S13 gi|226712684|sp|B5EM96|RS13_ACIF5 RecName: Full=30S ribosomal protein S13 gi|198247182|gb|ACH82775.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519566|gb|ACK80152.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 118 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/116 (57%), Positives = 82/116 (70%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K++ AL YI+GIG ++ + + I + RV + E E+ +IR + Sbjct: 1 MARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRVKDISEPELERIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK K Sbjct: 61 AK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKS 115 >gi|169823876|ref|YP_001691487.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328] gi|226712738|sp|B0RZT3|RS13_FINM2 RecName: Full=30S ribosomal protein S13 gi|167830681|dbj|BAG07597.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328] Length = 116 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110 >gi|56460994|ref|YP_156275.1| 30S ribosomal protein S13 [Idiomarina loihiensis L2TR] gi|81362955|sp|Q5QXV5|RS13_IDILO RecName: Full=30S ribosomal protein S13 gi|56180004|gb|AAV82726.1| Ribosomal protein S13 [Idiomarina loihiensis L2TR] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+G+G SQ I I + ++ L E ++ +R A+ Sbjct: 1 MARIAGINVPDNKHAVIALTAIYGVGRTRSQQILAATGIAEDTKIGSLSEDKLDALRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK Sbjct: 61 SK-FAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|209693945|ref|YP_002261873.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238] gi|208007896|emb|CAQ78026.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L + ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKISELNDEQIDILRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|42518453|ref|NP_964383.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533] gi|116628986|ref|YP_814158.1| 30S ribosomal protein S13 [Lactobacillus gasseri ATCC 33323] gi|227888829|ref|ZP_04006634.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200] gi|238853459|ref|ZP_04643837.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4] gi|268318875|ref|YP_003292531.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785] gi|282852673|ref|ZP_06262015.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1] gi|311111216|ref|ZP_07712613.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22] gi|81668269|sp|Q74L66|RS13_LACJO RecName: Full=30S ribosomal protein S13 gi|122274016|sp|Q046A2|RS13_LACGA RecName: Full=30S ribosomal protein S13 gi|41582738|gb|AAS08349.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533] gi|116094568|gb|ABJ59720.1| SSU ribosomal protein S13P [Lactobacillus gasseri ATCC 33323] gi|227850666|gb|EEJ60752.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200] gi|238833899|gb|EEQ26158.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4] gi|262397250|emb|CAX66264.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785] gi|282556415|gb|EFB62035.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1] gi|311066370|gb|EFQ46710.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22] gi|329666716|gb|AEB92664.1| 30S ribosomal protein S13 [Lactobacillus johnsonii DPC 6026] Length = 115 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC I + R + L + ++R + Sbjct: 1 MARIAGVDLPRNKRVVVALTYIYGIGEPTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|269122556|ref|YP_003310733.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386] gi|268616434|gb|ACZ10802.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386] Length = 121 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG ++ I K + +V L E +V QIR + Sbjct: 1 MARIAGVDIPRNKRVEISLTYIFGIGRSTANKILEKANVDKNIKVKDLSEEQVGQIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +++EG+LR+ + +NIKRLMD+ YRGLRHR GLPVRGQ+T TNARTRK K VA+ Sbjct: 61 DE-FKIEGELRKEIRLNIKRLMDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKAAVAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 [Enterobacter sp. 638] gi|145320239|gb|ABP62386.1| SSU ribosomal protein S13P [Enterobacter sp. 638] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|71278025|ref|YP_267373.1| 30S ribosomal protein S13 [Colwellia psychrerythraea 34H] gi|91207696|sp|Q488Z1|RS13_COLP3 RecName: Full=30S ribosomal protein S13 gi|71143765|gb|AAZ24238.1| ribosomal protein S13 [Colwellia psychrerythraea 34H] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I+GIG ++ IC I ++ +L E+++ +R + Sbjct: 1 MARIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAESTKISELDEAKIDLLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 DK-FTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|329893621|ref|ZP_08269755.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088] gi|328923548|gb|EGG30860.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++++C I + ++ L E+++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGKTKAKELCAATNIAEDTKIGDLSEAQMDELRGKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK Sbjct: 61 GE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRK 110 >gi|313123133|ref|YP_004033392.1| 30S ribosomal protein s13 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279696|gb|ADQ60415.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 116 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++++IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|260584440|ref|ZP_05852187.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633] gi|260157958|gb|EEW93027.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633] Length = 121 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +S+ + + + RV L E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGVTTSKQVLAAANVSEDTRVRDLSNDELDRIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|227487077|ref|ZP_03917393.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541759|ref|ZP_03971808.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51866] gi|227093151|gb|EEI28463.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182465|gb|EEI63437.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51866] Length = 122 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAKKLLEETGISPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 EASWKVEGDLRRQVAADIRRKIEIGCYQGMRHRRGLPVHGQRTKTNARTRK 111 >gi|227115250|ref|ZP_03828906.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328927|ref|ZP_03832951.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690161|ref|YP_003019351.1| ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494686|sp|C6DFS6|RS13_PECCP RecName: Full=30S ribosomal protein S13 gi|251756739|gb|ACT14815.1| ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 118 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|326803056|ref|YP_004320874.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a] gi|326650287|gb|AEA00470.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a] Length = 121 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG +++ IC + + RV L E+ ++R+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKATAEKICEACDVDQDTRVRDLTNDELDRLRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ +VEGDLRR + M+IKRL ++G YRG+RHRRGLPVRGQ T NARTRK GK G+A Sbjct: 61 DK-IKVEGDLRRDINMDIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRK--GKRGLA 116 >gi|161485633|ref|YP_925063.2| 30S ribosomal protein S13 [Nocardioides sp. JS614] gi|158706369|sp|A1SNJ1|RS13_NOCSJ RecName: Full=30S ribosomal protein S13 Length = 124 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +Q + + P+ RVHQL + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++++EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 111 >gi|269469223|gb|EEZ80754.1| ribosomal protein S13 [uncultured SUP05 cluster bacterium] Length = 117 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG ++ IC +L I P + +L E ++ IR A+ Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAKAICAELKIDPATKTAELSEDQLELIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++VEGDLRR VAM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK Sbjct: 61 AK-FEVEGDLRRQVAMDIKRLKDLGCYRGIRHRKSLPLRGQRTKTNARTRK 110 >gi|297588216|ref|ZP_06946860.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516] gi|297574905|gb|EFH93625.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516] Length = 116 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRTEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110 >gi|110833280|ref|YP_692139.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2] gi|123050727|sp|Q0VSI1|RS13_ALCBS RecName: Full=30S ribosomal protein S13 gi|110646391|emb|CAL15867.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++ IC I +V +L ++ IR + Sbjct: 1 MARIAGVNIPENKHTVISLTYIFGIGRTRAESICATTGIEQTAKVRELTGEQLDAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRK 110 >gi|119946249|ref|YP_943929.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37] gi|119947104|ref|YP_944784.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37] gi|158706266|sp|A1SXW5|RS13_PSYIN RecName: Full=30S ribosomal protein S13 gi|119864853|gb|ABM04330.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37] gi|119865708|gb|ABM05185.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I GIG SQ IC I ++ L E+++ +R + Sbjct: 1 MARIAGINVPDHKHAVIALTAIFGIGKTRSQIICAASGIAESTKLKDLDETQIEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK Sbjct: 61 AT-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRK 110 >gi|213964843|ref|ZP_03393042.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46] gi|213952379|gb|EEB63762.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + ++ K I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARANELLEKTGISPDLRTDALTDEQVAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|325068057|ref|ZP_08126730.1| 30S ribosomal protein S13 [Actinomyces oris K20] Length = 124 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I Sbjct: 1 MARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK Sbjct: 61 DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 111 >gi|19551796|ref|NP_599798.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|62389451|ref|YP_224853.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|145294732|ref|YP_001137553.1| 30S ribosomal protein S13 [Corynebacterium glutamicum R] gi|32363343|sp|Q8NSV6|RS13_CORGL RecName: Full=30S ribosomal protein S13 gi|158706225|sp|A4QBQ4|RS13_CORGB RecName: Full=30S ribosomal protein S13 gi|21323326|dbj|BAB97954.1| Ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|41324785|emb|CAF19267.1| RIBOSOMAL PROTEIN S13 [Corynebacterium glutamicum ATCC 13032] gi|140844652|dbj|BAF53651.1| hypothetical protein [Corynebacterium glutamicum R] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLEETGISPDLRTDNLTDEQIAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 111 >gi|291549396|emb|CBL25658.1| 30S ribosomal protein S13 [Ruminococcus torques L2-14] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 78/109 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++ I + P+ RV L EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSAERILKDAGVNPDTRVRDLTSEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 61 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 109 >gi|38233155|ref|NP_938922.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae NCTC 13129] gi|81401847|sp|Q6NJ66|RS13_CORDI RecName: Full=30S ribosomal protein S13 gi|38199414|emb|CAE49057.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLEETGISPDLRTDNLTDEQVSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|313683418|ref|YP_004061156.1| SSU ribosomal protein s13p [Sulfuricurvum kujiense DSM 16994] gi|313156278|gb|ADR34956.1| SSU ribosomal protein S13P [Sulfuricurvum kujiense DSM 16994] Length = 123 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/112 (56%), Positives = 79/112 (70%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +S+ I + + +RV +L E E I + I Sbjct: 1 MARIAGVDLPKKKRLEYALTYIYGIGLHTSRKILDATGLDYNKRVFELSEDEAATIAKEI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK Sbjct: 61 RSSGIAVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 112 >gi|238763712|ref|ZP_04624671.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638] gi|238698014|gb|EEP90772.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|253998038|ref|YP_003050101.1| 30S ribosomal protein S13 [Methylovorus sp. SIP3-4] gi|253984717|gb|ACT49574.1| ribosomal protein S13 [Methylovorus sp. SIP3-4] Length = 120 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G +++ IC + ++ L ++EV ++R + Sbjct: 1 MARIAGVNIPNHKHTEIALTSIYGVGRNTAKQICLAAGVAGTAKIKDLNDAEVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRTKTNARTRK 110 >gi|328478179|gb|EGF48022.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus MTCC 5462] Length = 126 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|172040038|ref|YP_001799752.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109] gi|226712722|sp|B1VEX9|RS13_CORU7 RecName: Full=30S ribosomal protein S13 gi|171851342|emb|CAQ04318.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLSDEQLAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENNWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|227530229|ref|ZP_03960278.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540] gi|227349904|gb|EEJ40195.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540] Length = 121 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +Q I + + RV L + QIR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNTRAQKILKDAGVSEDIRVRDLTPEQEEQIRTQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q YQVEGDLRR V +NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DQ-YQVEGDLRREVTLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|297582475|ref|YP_003698255.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10] gi|297140932|gb|ADH97689.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10] Length = 121 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L Y+ GIG + I + + RV L E E+ +IR+ + Sbjct: 1 MARVAGVDIPRDKRVVVSLTYVFGIGRSKAAQILTEAGVSENTRVRDLTEDELAKIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 D-GVKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|302205541|gb|ADL09883.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis C231] gi|308275777|gb|ADO25676.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis I19] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|300932969|ref|ZP_07148225.1| 30S ribosomal protein S13 [Corynebacterium resistens DSM 45100] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|11467401|ref|NP_043258.1| ribosomal protein S13 [Cyanophora paradoxa] gi|1350871|sp|P48137|RR13_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S13 gi|1016202|gb|AAA81289.1| ribosomal protein S13 [Cyanophora paradoxa] Length = 126 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/101 (59%), Positives = 76/101 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I +K+ + P+ RV L ++ + Q+R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSKEILSKIELDPDTRVRDLPDNAIAQLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E DYQVEGDLRR +MNIKRL D+GCYRG RHR LPVRGQ Sbjct: 61 ETDYQVEGDLRRFESMNIKRLADIGCYRGRRHRLNLPVRGQ 101 >gi|27468717|ref|NP_765354.1| 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228] gi|57867677|ref|YP_189370.1| 30S ribosomal protein S13 [Staphylococcus epidermidis RP62A] gi|242243971|ref|ZP_04798414.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144] gi|251812071|ref|ZP_04826544.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060] gi|282875366|ref|ZP_06284239.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135] gi|293368457|ref|ZP_06615081.1| ribosomal protein S13/S18 [Staphylococcus epidermidis M23864:W2(grey)] gi|32363310|sp|Q8CRI3|RS13_STAES RecName: Full=30S ribosomal protein S13 gi|81673639|sp|Q5HM23|RS13_STAEQ RecName: Full=30S ribosomal protein S13 gi|27316265|gb|AAO05440.1|AE016750_45 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228] gi|57638335|gb|AAW55123.1| ribosomal protein S13/S18 [Staphylococcus epidermidis RP62A] gi|242232604|gb|EES34916.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144] gi|251804405|gb|EES57062.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060] gi|281296131|gb|EFA88652.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135] gi|291317415|gb|EFE57837.1| ribosomal protein S13/S18 [Staphylococcus epidermidis M23864:W2(grey)] gi|319400601|gb|EFV88826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis FRI909] gi|329731229|gb|EGG67599.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU144] gi|329736494|gb|EGG72762.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU028] gi|329737063|gb|EGG73318.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU045] Length = 121 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK Sbjct: 61 DG-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110 >gi|242278681|ref|YP_002990810.1| 30S ribosomal protein S13 [Desulfovibrio salexigens DSM 2638] gi|259494672|sp|C6C1A8|RS13_DESAD RecName: Full=30S ribosomal protein S13 gi|242121575|gb|ACS79271.1| ribosomal protein S13 [Desulfovibrio salexigens DSM 2638] Length = 123 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+G+G ++ I + + I + L +V IR+ + Sbjct: 1 MARIAGVDLPKNKRLDIALTYIYGVGRTTALKILDTVGIDWTLKTDDLSGEQVNTIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR +IKRLMD+GCYRGLRHRRGLPVRGQ + TNARTRK + ++R Sbjct: 61 EDNYKVEGDLRRDQIADIKRLMDIGCYRGLRHRRGLPVRGQSSKTNARTRKGPRRSVMSR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83648830|ref|YP_437265.1| 30S ribosomal protein S13 [Hahella chejuensis KCTC 2396] gi|123530605|sp|Q2S934|RS13_HAHCH RecName: Full=30S ribosomal protein S13 gi|83636873|gb|ABC32840.1| Ribosomal protein S13 [Hahella chejuensis KCTC 2396] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI+GIG +S+ +C + I P+ +V L E ++ +R I Sbjct: 1 MARIAGVNIPDNKHTEVSLTYIYGIGRTTSRGLCERTGISPQAKVKDLSEEQLDVLRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V MNIKRL DLGCYRGLRHR LPVRGQRT TNARTRK Sbjct: 61 AK-MVVEGDLRREVQMNIKRLKDLGCYRGLRHRHSLPVRGQRTKTNARTRK 110 >gi|255319793|ref|ZP_05360998.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82] gi|262380326|ref|ZP_06073480.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164] gi|255303112|gb|EET82324.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82] gi|262297772|gb|EEY85687.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAAGITPTVKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|120402444|ref|YP_952273.1| 30S ribosomal protein S13 [Mycobacterium vanbaalenii PYR-1] gi|158706254|sp|A1T517|RS13_MYCVP RecName: Full=30S ribosomal protein S13 gi|119955262|gb|ABM12267.1| SSU ribosomal protein S13P [Mycobacterium vanbaalenii PYR-1] Length = 124 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG SQ+I I + R L + +V Q+R I Sbjct: 1 MARLMGVDLPRDKRMEIALTYIYGIGRTRSQEILEATGISRDMRTKDLTDDQVTQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|251787993|ref|YP_003002714.1| 30S ribosomal protein S13 [Dickeya zeae Ech1591] gi|271502224|ref|YP_003335250.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586] gi|307132817|ref|YP_003884833.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937] gi|247536614|gb|ACT05235.1| ribosomal protein S13 [Dickeya zeae Ech1591] gi|270345779|gb|ACZ78544.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586] gi|306530346|gb|ADN00277.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRSKSICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|269128488|ref|YP_003301858.1| 30S ribosomal protein S13 [Thermomonospora curvata DSM 43183] gi|268313446|gb|ACY99820.1| ribosomal protein S13 [Thermomonospora curvata DSM 43183] Length = 126 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/110 (53%), Positives = 83/110 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + + + + RVHQL + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEVALTYIYGIGRTRALETLRQTGVNGDLRVHQLGDEELVKLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y+VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|325135171|gb|EGC57797.1| ribosomal protein S13p/S18e [Neisseria meningitidis M13399] Length = 120 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P+ + L E+++ +R I Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|311693292|gb|ADP96165.1| ribosomal protein S13, bacterial-type [marine bacterium HP15] Length = 118 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHAVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLSDEQLEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK Sbjct: 61 GK-VSVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110 >gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] gi|262183874|ref|ZP_06043295.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] gi|254811143|sp|C3PL35|RS13_CORA7 RecName: Full=30S ribosomal protein S13 gi|227453286|gb|ACP32039.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] Length = 122 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAKELLEKTGISPDLRTDNLDDDQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 111 >gi|21674974|ref|NP_663039.1| 30S ribosomal protein S13 [Chlorobium tepidum TLS] gi|32363337|sp|Q8KAJ5|RS13_CHLTE RecName: Full=30S ribosomal protein S13 gi|21648206|gb|AAM73381.1| ribosomal protein S13 [Chlorobium tepidum TLS] Length = 125 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 79/109 (72%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL Y++GIG S+++I K + P++++ +L + E IR+ I Sbjct: 2 RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEG+ R ++IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110 >gi|156932258|ref|YP_001436174.1| 30S ribosomal protein S13 [Cronobacter sakazakii ATCC BAA-894] gi|260599618|ref|YP_003212189.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032] gi|156530512|gb|ABU75338.1| hypothetical protein ESA_00029 [Cronobacter sakazakii ATCC BAA-894] gi|260218795|emb|CBA34143.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032] Length = 118 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAVGFAEDVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|300857806|ref|YP_003782789.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis FRC41] gi|300685260|gb|ADK28182.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis FRC41] Length = 142 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 21 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 80 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 81 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 131 >gi|182436602|ref|YP_001824321.1| 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777224|ref|ZP_08236489.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1] gi|226712788|sp|B1W3Y2|RS13_STRGG RecName: Full=30S ribosomal protein S13 gi|178465118|dbj|BAG19638.1| putative 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657557|gb|EGE42403.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1] Length = 126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR V NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|167957549|ref|ZP_02544623.1| 30S ribosomal protein S13 [candidate division TM7 single-cell isolate TM7c] Length = 128 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP K+V +L YI+GIG K ++DI I P RV L E+E +IR I Sbjct: 1 MARISGVVIPSEKQVQISLTYIYGIGPKYARDILAAAKIEPTTRVKDLTEAEEQKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y EGDL+R V NIKRL D+ YRGLRH+ GLPVRGQRT TNARTRK Sbjct: 61 DNNYTTEGDLQRLVTNNIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRK 111 >gi|302330096|gb|ADL20290.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis 1002] Length = 143 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 22 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 81 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 82 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 132 >gi|238855092|ref|ZP_04645420.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3] gi|256852060|ref|ZP_05557447.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN] gi|260661371|ref|ZP_05862284.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN] gi|260664877|ref|ZP_05865728.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US] gi|297205065|ref|ZP_06922461.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16] gi|313472573|ref|ZP_07813062.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153] gi|238832336|gb|EEQ24645.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3] gi|239530013|gb|EEQ69014.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153] gi|256615472|gb|EEU20662.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN] gi|260547826|gb|EEX23803.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN] gi|260561360|gb|EEX27333.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US] gi|297149643|gb|EFH29940.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16] Length = 116 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPREKRIVVALTYIYGIGEPTAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR ++MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREISMNIKRLVDIGSYRGVRHRRGLPVRGQNTKNNARTRK 110 >gi|170769485|ref|ZP_02903938.1| ribosomal protein S13p [Escherichia albertii TW07627] gi|331674804|ref|ZP_08375561.1| 30S ribosomal protein S13 [Escherichia coli TA280] gi|170121542|gb|EDS90473.1| ribosomal protein S13p [Escherichia albertii TW07627] gi|331067713|gb|EGI39111.1| 30S ribosomal protein S13 [Escherichia coli TA280] Length = 118 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|282899973|ref|ZP_06307934.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505] gi|281195243|gb|EFA70179.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505] Length = 145 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/101 (59%), Positives = 75/101 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAGV++PR KRV L YI+GIG + SQDI + P+ RV L ++++ +R I Sbjct: 20 VARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 79 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQ Sbjct: 80 ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 120 >gi|116266144|gb|ABJ91310.1| 30S ribosomal protein S13 [Porphyra yezoensis] Length = 126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + + L + +V+ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT NARTR+ GK VA Sbjct: 61 ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRINARTRRG-GKKTVAG 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|109897336|ref|YP_660591.1| 30S ribosomal protein S13 [Pseudoalteromonas atlantica T6c] gi|122972199|sp|Q15X51|RS13_PSEA6 RecName: Full=30S ribosomal protein S13 gi|109699617|gb|ABG39537.1| SSU ribosomal protein S13P [Pseudoalteromonas atlantica T6c] gi|332175077|gb|AEE24331.1| 30S ribosomal protein S13 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 118 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I G+G +Q IC + ++ L E+++ ++R + Sbjct: 1 MARIAGINIPEHKHTVIALTAIFGVGSTRAQSICEAAGVAETTKIKDLDEAQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|309789646|ref|ZP_07684227.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6] gi|308228382|gb|EFO82029.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6] Length = 126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/101 (59%), Positives = 78/101 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ ++ YI GIG + D+ K + PE RV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKKIEISIRYIFGIGPSNGLDVLRKANVNPETRVRDLTEEEVGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQ Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQ 101 >gi|121592835|ref|YP_984731.1| 30S ribosomal protein S13 [Acidovorax sp. JS42] gi|222109615|ref|YP_002551879.1| 30S ribosomal protein s13 [Acidovorax ebreus TPSY] gi|319764617|ref|YP_004128554.1| 30S ribosomal protein s13 [Alicycliphilus denitrificans BC] gi|330826874|ref|YP_004390177.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601] gi|158706210|sp|A1W330|RS13_ACISJ RecName: Full=30S ribosomal protein S13 gi|254811148|sp|B9MBV9|RS13_DIAST RecName: Full=30S ribosomal protein S13 gi|120604915|gb|ABM40655.1| SSU ribosomal protein S13P [Acidovorax sp. JS42] gi|221729059|gb|ACM31879.1| ribosomal protein S13 [Acidovorax ebreus TPSY] gi|317119178|gb|ADV01667.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans BC] gi|329312246|gb|AEB86661.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601] Length = 121 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG ++ IC I ++V +L ++++ +IR I Sbjct: 1 MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|82701922|ref|YP_411488.1| 30S ribosomal protein S13 [Nitrosospira multiformis ATCC 25196] gi|91207708|sp|Q2YAX5|RS13_NITMU RecName: Full=30S ribosomal protein S13 gi|82409987|gb|ABB74096.1| SSU ribosomal protein S13P [Nitrosospira multiformis ATCC 25196] Length = 125 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I+GIG +++IC I ++ + ++E+ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIYGIGRARAREICEAAGINVSTKMKDVTDAEMDKLRDNV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110 >gi|291613259|ref|YP_003523416.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1] gi|291583371|gb|ADE11029.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1] Length = 121 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I+GIG +Q IC I +V + +S++ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIYGIGRTRAQQICAAAGIVTSTKVKDISDSDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLP RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREISMNIKRLMDLGCYRGLRHRRGLPCRGQRTRTNARTRK 110 >gi|227879266|ref|ZP_03997136.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01] gi|256849159|ref|ZP_05554592.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US] gi|227861160|gb|EEJ68809.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01] gi|256713935|gb|EEU28923.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US] Length = 116 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICAYAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|322436521|ref|YP_004218733.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9] gi|321164248|gb|ADW69953.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9] Length = 126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V L YI+GIG + I I P +V L E ++ IRQ I Sbjct: 1 MARIAGVDVPNNKQVRIGLTYIYGIGDSRAAKILTAADIDPIAKVGTLDEDQLNAIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EKQGMIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|331703692|ref|YP_004400379.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256384359|gb|ACU78929.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str. GM12] gi|256385191|gb|ACU79760.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455858|gb|ADH22093.1| 30S ribosomal protein S13 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802247|emb|CBW54401.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 121 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K Sbjct: 61 SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110 >gi|50086193|ref|YP_047703.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1] gi|81392282|sp|Q6F7T4|RS13_ACIAD RecName: Full=30S ribosomal protein S13 gi|49532169|emb|CAG69881.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1] Length = 118 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G +++ I + I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKSILAAVGIGPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|294630918|ref|ZP_06709478.1| 30S ribosomal protein S13 [Streptomyces sp. e14] gi|292834251|gb|EFF92600.1| 30S ribosomal protein S13 [Streptomyces sp. e14] Length = 126 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLAATGVDPNTRVRDLTEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|295398312|ref|ZP_06808354.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563] gi|294973451|gb|EFG49236.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563] Length = 121 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V AL YI+GIG +SQ I + I + RV L E+ ++R A+ Sbjct: 1 MARIAGVDIPREKRIVIALTYIYGIGKTTSQKILAQAEISEDTRVRDLTNDELDRLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR A++IKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DT-IKVEGDLRRERALDIKRLQEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|145225549|ref|YP_001136227.1| 30S ribosomal protein S13 [Mycobacterium gilvum PYR-GCK] gi|315445901|ref|YP_004078780.1| 30S ribosomal protein S13P [Mycobacterium sp. Spyr1] gi|189044282|sp|A4TEI2|RS13_MYCGI RecName: Full=30S ribosomal protein S13 gi|145218035|gb|ABP47439.1| SSU ribosomal protein S13P [Mycobacterium gilvum PYR-GCK] gi|315264204|gb|ADU00946.1| SSU ribosomal protein S13P [Mycobacterium sp. Spyr1] Length = 124 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G SQ+I I ++R L + +V Q+R I Sbjct: 1 MARLMGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGISRDQRTKDLTDDQVSQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|68536851|ref|YP_251556.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411] gi|260579209|ref|ZP_05847099.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734] gi|91207697|sp|Q4JTB9|RS13_CORJK RecName: Full=30S ribosomal protein S13 gi|68264450|emb|CAI37938.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411] gi|258602695|gb|EEW15982.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734] Length = 122 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ENTWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|22127882|ref|NP_671305.1| 30S ribosomal protein S13 [Yersinia pestis KIM 10] gi|45440089|ref|NP_991628.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str. 91001] gi|51597966|ref|YP_072157.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953] gi|108809233|ref|YP_653149.1| 30S ribosomal protein S13 [Yersinia pestis Antiqua] gi|108813998|ref|YP_649765.1| 30S ribosomal protein S13 [Yersinia pestis Nepal516] gi|145597472|ref|YP_001161547.1| 30S ribosomal protein S13 [Yersinia pestis Pestoides F] gi|150260721|ref|ZP_01917449.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125] gi|153948869|ref|YP_001402841.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758] gi|162419404|ref|YP_001605194.1| 30S ribosomal protein S13 [Yersinia pestis Angola] gi|165927875|ref|ZP_02223707.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. F1991016] gi|165940335|ref|ZP_02228856.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. IP275] gi|166010483|ref|ZP_02231381.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213241|ref|ZP_02239276.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. B42003004] gi|167398509|ref|ZP_02304033.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418694|ref|ZP_02310447.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425710|ref|ZP_02317463.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022566|ref|YP_001719071.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis YPIII] gi|186897162|ref|YP_001874274.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+] gi|218927437|ref|YP_002345312.1| 30S ribosomal protein S13 [Yersinia pestis CO92] gi|229836287|ref|ZP_04456454.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A] gi|229840089|ref|ZP_04460248.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842171|ref|ZP_04462326.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. India 195] gi|229904529|ref|ZP_04519640.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516] gi|270488253|ref|ZP_06205327.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27] gi|294502306|ref|YP_003566368.1| 30S ribosomal protein S13 [Yersinia pestis Z176003] gi|32363373|sp|Q8ZJ90|RS13_YERPE RecName: Full=30S ribosomal protein S13 gi|81638250|sp|Q664U3|RS13_YERPS RecName: Full=30S ribosomal protein S13 gi|123072596|sp|Q1C2W8|RS13_YERPA RecName: Full=30S ribosomal protein S13 gi|123246110|sp|Q1CCW5|RS13_YERPN RecName: Full=30S ribosomal protein S13 gi|158706296|sp|A4TH12|RS13_YERPP RecName: Full=30S ribosomal protein S13 gi|166991605|sp|A7FNL3|RS13_YERP3 RecName: Full=30S ribosomal protein S13 gi|226712809|sp|B2K515|RS13_YERPB RecName: Full=30S ribosomal protein S13 gi|226712810|sp|A9R915|RS13_YERPG RecName: Full=30S ribosomal protein S13 gi|226712811|sp|B1JIY3|RS13_YERPY RecName: Full=30S ribosomal protein S13 gi|21961018|gb|AAM87556.1|AE014003_14 30S ribosomal subunit protein S13 [Yersinia pestis KIM 10] gi|45434944|gb|AAS60505.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str. 91001] gi|51591248|emb|CAH22914.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953] gi|108777646|gb|ABG20165.1| SSU ribosomal protein S13P [Yersinia pestis Nepal516] gi|108781146|gb|ABG15204.1| SSU ribosomal protein S13P [Yersinia pestis Antiqua] gi|115346048|emb|CAL18914.1| 30S ribosomal protein S13 [Yersinia pestis CO92] gi|145209168|gb|ABP38575.1| SSU ribosomal protein S13P [Yersinia pestis Pestoides F] gi|149290129|gb|EDM40206.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125] gi|152960364|gb|ABS47825.1| ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758] gi|162352219|gb|ABX86167.1| ribosomal protein S13 [Yersinia pestis Angola] gi|165911725|gb|EDR30381.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. IP275] gi|165920151|gb|EDR37452.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990573|gb|EDR42874.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205539|gb|EDR50019.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962688|gb|EDR58709.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051013|gb|EDR62421.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055400|gb|EDR65194.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749100|gb|ACA66618.1| ribosomal protein S13 [Yersinia pseudotuberculosis YPIII] gi|186700188|gb|ACC90817.1| ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+] gi|229678647|gb|EEO74752.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516] gi|229690481|gb|EEO82535.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. India 195] gi|229696455|gb|EEO86502.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706355|gb|EEO92362.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A] gi|262360386|gb|ACY57107.1| 30S ribosomal protein S13 [Yersinia pestis D106004] gi|262364337|gb|ACY60894.1| 30S ribosomal protein S13 [Yersinia pestis D182038] gi|270336757|gb|EFA47534.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27] gi|294352765|gb|ADE63106.1| 30S ribosomal protein S13 [Yersinia pestis Z176003] gi|320013364|gb|ADV96935.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 118 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAEHVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|108798082|ref|YP_638279.1| 30S ribosomal protein S13 [Mycobacterium sp. MCS] gi|119867178|ref|YP_937130.1| 30S ribosomal protein S13 [Mycobacterium sp. KMS] gi|126433742|ref|YP_001069433.1| 30S ribosomal protein S13 [Mycobacterium sp. JLS] gi|123179360|sp|Q1BD11|RS13_MYCSS RecName: Full=30S ribosomal protein S13 gi|158706250|sp|A3PVL5|RS13_MYCSJ RecName: Full=30S ribosomal protein S13 gi|158706251|sp|A1UBY2|RS13_MYCSK RecName: Full=30S ribosomal protein S13 gi|108768501|gb|ABG07223.1| SSU ribosomal protein S13P [Mycobacterium sp. MCS] gi|119693267|gb|ABL90340.1| SSU ribosomal protein S13P [Mycobacterium sp. KMS] gi|126233542|gb|ABN96942.1| SSU ribosomal protein S13P [Mycobacterium sp. JLS] Length = 124 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G SQ+I I + R L + +V Q+R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGIDRDLRTKDLTDDQVTQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|149376662|ref|ZP_01894421.1| 30S ribosomal protein S13 [Marinobacter algicola DG893] gi|149359035|gb|EDM47500.1| 30S ribosomal protein S13 [Marinobacter algicola DG893] Length = 118 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHAVISLTYIFGVGKTAAQKLCDATGVKPDVKVKDLSDEQLESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK Sbjct: 61 GK-LAVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110 >gi|116671488|ref|YP_832421.1| 30S ribosomal protein S13 [Arthrobacter sp. FB24] gi|158706333|sp|A0JZ51|RS13_ARTS2 RecName: Full=30S ribosomal protein S13 gi|116611597|gb|ABK04321.1| SSU ribosomal protein S13P [Arthrobacter sp. FB24] Length = 125 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L +++++++R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111 >gi|119538759|gb|ABL83376.1| SSU ribosomal protein S13P [Nocardioides sp. JS614] Length = 140 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +Q + + P+ RVHQL + E++++R I Sbjct: 17 MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++++EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK Sbjct: 77 EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 127 >gi|220913402|ref|YP_002488711.1| 30S ribosomal protein S13 [Arthrobacter chlorophenolicus A6] gi|325964134|ref|YP_004242040.1| 30S ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3] gi|254811125|sp|B8HCX6|RS13_ARTCA RecName: Full=30S ribosomal protein S13 gi|219860280|gb|ACL40622.1| ribosomal protein S13 [Arthrobacter chlorophenolicus A6] gi|323470221|gb|ADX73906.1| SSU ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3] Length = 124 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L +++++++R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111 >gi|239943602|ref|ZP_04695539.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] gi|239990055|ref|ZP_04710719.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 11379] gi|291447069|ref|ZP_06586459.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] gi|291350016|gb|EFE76920.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] Length = 126 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAATGVNPNTRVRDLAEEDLVKIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR V NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|54307563|ref|YP_128583.1| 30S ribosomal protein S13 [Photobacterium profundum SS9] gi|81615623|sp|Q6LV94|RS13_PHOPR RecName: Full=30S ribosomal protein S13 gi|46911983|emb|CAG18781.1| putative ribosomal protein S13 [Photobacterium profundum SS9] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ + + I ++ +L E ++ +R+ + Sbjct: 1 MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLREGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|189183973|ref|YP_001937758.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda] gi|226712771|sp|B3CT27|RS13_ORITI RecName: Full=30S ribosomal protein S13 gi|189180744|dbj|BAG40524.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda] Length = 125 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+ VN+P KRV+ L YI+GIG ++Q IC ++ + ++V L E++ +R I Sbjct: 1 MARISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR + +NIK+ D+ CY GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRK 111 >gi|53803438|ref|YP_114766.1| 30S ribosomal protein S13 [Methylococcus capsulatus str. Bath] gi|81681371|sp|Q605D4|RS13_METCA RecName: Full=30S ribosomal protein S13 gi|53757199|gb|AAU91490.1| ribosomal protein S13 [Methylococcus capsulatus str. Bath] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V+ +L I+GIG + IC I +++V +L + +V ++R + Sbjct: 1 MARIAGVNIPDHKHVLISLTAIYGIGRTRAGLICKNAGIETDKKVRELSDEQVERLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR VAMNIKRLMDLG YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVAMNIKRLMDLGSYRGMRHRRGLPVRGQRTRTNARTRK 110 >gi|261823210|ref|YP_003261316.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163] gi|261607223|gb|ACX89709.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|15676092|ref|NP_273223.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58] gi|59802138|ref|YP_208850.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090] gi|121634039|ref|YP_974284.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18] gi|161870897|ref|YP_001600072.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442] gi|218767145|ref|YP_002341657.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491] gi|239997948|ref|ZP_04717872.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|240015074|ref|ZP_04721987.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI18] gi|240017523|ref|ZP_04724063.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA6140] gi|240081666|ref|ZP_04726209.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|240113944|ref|ZP_04728434.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|240116678|ref|ZP_04730740.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|240118900|ref|ZP_04732962.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|240122146|ref|ZP_04735108.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID24-1] gi|240124438|ref|ZP_04737394.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|240124693|ref|ZP_04737579.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|240129114|ref|ZP_04741775.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|254494699|ref|ZP_05107870.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291] gi|254805791|ref|YP_003084012.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14] gi|260439563|ref|ZP_05793379.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|268593798|ref|ZP_06127965.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|268597763|ref|ZP_06131930.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|268600008|ref|ZP_06134175.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|268602345|ref|ZP_06136512.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|268604609|ref|ZP_06138776.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|268683066|ref|ZP_06149928.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|268683267|ref|ZP_06150129.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|268687496|ref|ZP_06154358.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|291042799|ref|ZP_06568540.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|293398180|ref|ZP_06642385.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62] gi|296313387|ref|ZP_06863328.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768] gi|304388965|ref|ZP_07371012.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091] gi|54039350|sp|P66386|RS13_NEIMB RecName: Full=30S ribosomal protein S13 gi|54042122|sp|P66385|RS13_NEIMA RecName: Full=30S ribosomal protein S13 gi|75355451|sp|Q5F5U9|RS13_NEIG1 RecName: Full=30S ribosomal protein S13 gi|158706255|sp|A1KRJ6|RS13_NEIMF RecName: Full=30S ribosomal protein S13 gi|189044283|sp|A9M3U3|RS13_NEIM0 RecName: Full=30S ribosomal protein S13 gi|7225383|gb|AAF40622.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58] gi|59719033|gb|AAW90438.1| putative 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090] gi|120865745|emb|CAM09474.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18] gi|121051153|emb|CAM07424.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491] gi|161596450|gb|ABX74110.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442] gi|226513739|gb|EEH63084.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291] gi|254669333|emb|CBA08378.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14] gi|254670760|emb|CBA07029.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha153] gi|254672690|emb|CBA06582.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha275] gi|261391701|emb|CAX49150.1| 30S ribosomal protein S13 [Neisseria meningitidis 8013] gi|268547187|gb|EEZ42605.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|268551551|gb|EEZ46570.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|268584139|gb|EEZ48815.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|268586476|gb|EEZ51152.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|268588740|gb|EEZ53416.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|268623350|gb|EEZ55750.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|268623551|gb|EEZ55951.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|268627780|gb|EEZ60180.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|291013233|gb|EFE05199.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|291611443|gb|EFF40513.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62] gi|296840097|gb|EFH24035.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768] gi|304337099|gb|EFM03286.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091] gi|308388381|gb|ADO30701.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha710] gi|319411351|emb|CBY91762.1| 30S ribosomal protein S13 [Neisseria meningitidis WUE 2594] gi|325129084|gb|EGC51933.1| ribosomal protein S13p/S18e [Neisseria meningitidis N1568] gi|325131055|gb|EGC53779.1| ribosomal protein S13p/S18e [Neisseria meningitidis OX99.30304] gi|325133077|gb|EGC55749.1| ribosomal protein S13p/S18e [Neisseria meningitidis M6190] gi|325137223|gb|EGC59818.1| ribosomal protein S13p/S18e [Neisseria meningitidis M0579] gi|325139055|gb|EGC61601.1| ribosomal protein S13p/S18e [Neisseria meningitidis ES14902] gi|325141178|gb|EGC63678.1| ribosomal protein S13p/S18e [Neisseria meningitidis CU385] gi|325143255|gb|EGC65594.1| ribosomal protein S13p/S18e [Neisseria meningitidis 961-5945] gi|325145362|gb|EGC67639.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240013] gi|325197452|gb|ADY92908.1| ribosomal protein S13p/S18e [Neisseria meningitidis G2136] gi|325199378|gb|ADY94833.1| ribosomal protein S13p/S18e [Neisseria meningitidis H44/76] gi|325203000|gb|ADY98454.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240149] gi|325203285|gb|ADY98738.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240355] gi|325205258|gb|ADZ00711.1| ribosomal protein S13p/S18e [Neisseria meningitidis M04-240196] gi|325207202|gb|ADZ02654.1| hypothetical protein NMBNZ0533_0169 [Neisseria meningitidis NZ-05/33] Length = 120 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P+ + L E+++ +R + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|89093593|ref|ZP_01166541.1| ribosomal protein S13 [Oceanospirillum sp. MED92] gi|89082283|gb|EAR61507.1| ribosomal protein S13 [Oceanospirillum sp. MED92] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+GIG ++ DI I P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGIGRTTASDILEACGIAPSTKIADLSDEQLDIVRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGC+RG+RHRR LPVRGQR+ TNARTRK Sbjct: 61 AK-FTVEGDLRREISMSIKRLMDLGCFRGIRHRRNLPVRGQRSKTNARTRK 110 >gi|315640138|ref|ZP_07895260.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952] gi|315484115|gb|EFU74589.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952] Length = 121 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR I Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNDQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR + +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREINLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|16801818|ref|NP_472086.1| 30S ribosomal protein S13 [Listeria innocua Clip11262] gi|16804646|ref|NP_466131.1| 30S ribosomal protein S13 [Listeria monocytogenes EGD-e] gi|46908780|ref|YP_015169.1| 30S ribosomal protein S13 [Listeria monocytogenes str. 4b F2365] gi|47093974|ref|ZP_00231708.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858] gi|47097179|ref|ZP_00234744.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854] gi|217966193|ref|YP_002351871.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23] gi|224499281|ref|ZP_03667630.1| 30S ribosomal protein S13 [Listeria monocytogenes Finland 1988] gi|224503598|ref|ZP_03671905.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL R2-561] gi|226225154|ref|YP_002759261.1| ribosomal protein S13 [Listeria monocytogenes Clip81459] gi|254825031|ref|ZP_05230032.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194] gi|254829057|ref|ZP_05233744.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165] gi|254830961|ref|ZP_05235616.1| 30S ribosomal protein S13 [Listeria monocytogenes 10403S] gi|254854187|ref|ZP_05243535.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503] gi|254899941|ref|ZP_05259865.1| 30S ribosomal protein S13 [Listeria monocytogenes J0161] gi|254912853|ref|ZP_05262865.1| ribosomal protein S13 [Listeria monocytogenes J2818] gi|254931122|ref|ZP_05264481.1| ribosomal protein S13 [Listeria monocytogenes HPB2262] gi|254937233|ref|ZP_05268930.1| ribosomal protein S13 [Listeria monocytogenes F6900] gi|254992728|ref|ZP_05274918.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-064] gi|255027533|ref|ZP_05299519.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-003] gi|255028409|ref|ZP_05300360.1| 30S ribosomal protein S13 [Listeria monocytogenes LO28] gi|255520567|ref|ZP_05387804.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-175] gi|284800506|ref|YP_003412371.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578] gi|284993692|ref|YP_003415460.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923] gi|290891793|ref|ZP_06554790.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071] gi|300763641|ref|ZP_07073639.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017] gi|315283815|ref|ZP_07871884.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120] gi|54039349|sp|P66384|RS13_LISIN RecName: Full=30S ribosomal protein S13 gi|54042121|sp|P66383|RS13_LISMO RecName: Full=30S ribosomal protein S13 gi|67461446|sp|Q71WH0|RS13_LISMF RecName: Full=30S ribosomal protein S13 gi|254811152|sp|B8DB32|RS13_LISMH RecName: Full=30S ribosomal protein S13 gi|259494684|sp|C1KZF7|RS13_LISMC RecName: Full=30S ribosomal protein S13 gi|16412096|emb|CAD00686.1| ribosomal protein S13 [Listeria monocytogenes EGD-e] gi|16415293|emb|CAC97983.1| ribosomal protein S13 [Listeria innocua Clip11262] gi|46882053|gb|AAT05346.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. F2365] gi|47014438|gb|EAL05406.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854] gi|47017635|gb|EAL08434.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858] gi|217335463|gb|ACK41257.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23] gi|225877616|emb|CAS06330.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601466|gb|EEW14791.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165] gi|258607579|gb|EEW20187.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503] gi|258609838|gb|EEW22446.1| ribosomal protein S13 [Listeria monocytogenes F6900] gi|284056068|gb|ADB67009.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578] gi|284059159|gb|ADB70098.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923] gi|290558387|gb|EFD91904.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071] gi|293582670|gb|EFF94702.1| ribosomal protein S13 [Listeria monocytogenes HPB2262] gi|293590851|gb|EFF99185.1| ribosomal protein S13 [Listeria monocytogenes J2818] gi|293594273|gb|EFG02034.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194] gi|300515918|gb|EFK42967.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017] gi|307572197|emb|CAR85376.1| rpsM [Listeria monocytogenes L99] gi|313606575|gb|EFR83376.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-208] gi|313612542|gb|EFR86615.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120] gi|313616944|gb|EFR89579.1| 30S ribosomal protein S13 [Listeria innocua FSL S4-378] gi|313622248|gb|EFR92761.1| 30S ribosomal protein S13 [Listeria innocua FSL J1-023] gi|328468092|gb|EGF39098.1| 30S ribosomal protein S13 [Listeria monocytogenes 1816] gi|328469780|gb|EGF40697.1| 30S ribosomal protein S13 [Listeria monocytogenes 220] Length = 121 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/122 (50%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG ++++++ + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|283788066|ref|YP_003367931.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168] gi|282951520|emb|CBG91219.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|313673443|ref|YP_004051554.1| SSU ribosomal protein s13p [Calditerrivibrio nitroreducens DSM 19672] gi|312940199|gb|ADR19391.1| SSU ribosomal protein S13P [Calditerrivibrio nitroreducens DSM 19672] Length = 122 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 58/122 (47%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP K++ L YI+GIG ++ I ++L + +++ L E E+ IR+ I Sbjct: 1 MARVAGVDIPNNKKLEIGLTYIYGIGRSTANRIIDELNLDRNKKIGDLTEQEISSIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119 +++ +VEGDLR+ +A+NIKRL+++ CYRG RH+ G+PVRGQ+T +NARTR+ GK G+ Sbjct: 61 DENLKVEGDLRKDIALNIKRLIEINCYRGYRHKNGMPVRGQKTRSNARTRRGLAGKRGIK 120 Query: 120 RK 121 RK Sbjct: 121 RK 122 >gi|197303836|ref|ZP_03168872.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC 29176] gi|197297129|gb|EDY31693.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC 29176] Length = 127 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 77/109 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L EV +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSADRILKDAGVNPDTRVRDLTSEEVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 66 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114 >gi|257870541|ref|ZP_05650194.1| ribosomal protein S13 [Enterococcus gallinarum EG2] gi|257804705|gb|EEV33527.1| ribosomal protein S13 [Enterococcus gallinarum EG2] Length = 121 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] gi|241320007|gb|EER56388.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] Length = 120 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPSTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|119478110|ref|ZP_01618189.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143] gi|119448816|gb|EAW30059.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+GIG S++ +C + + ++ L E ++ +R I Sbjct: 1 MARIAGVNIPDHKHAVISLTYIYGIGRPSAKQLCAATGVAEDIKIGALNEEQLDSLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRL+DLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-MSVEGDLRRQVSMNIKRLLDLGCYRGLRHRRNLPLRGQRTKTNARTRK 110 >gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933] gi|15833417|ref|NP_312190.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. Sakai] gi|16131177|ref|NP_417757.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|24114576|ref|NP_709086.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 301] gi|26249884|ref|NP_755924.1| 30S ribosomal protein S13 [Escherichia coli CFT073] gi|30065401|ref|NP_839572.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 2457T] gi|74313817|ref|YP_312236.1| 30S ribosomal protein S13 [Shigella sonnei Ss046] gi|82545661|ref|YP_409608.1| 30S ribosomal protein S13 [Shigella boydii Sb227] gi|82778594|ref|YP_404943.1| 30S ribosomal protein S13 [Shigella dysenteriae Sd197] gi|89110712|ref|AP_004492.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. W3110] gi|91212726|ref|YP_542712.1| 30S ribosomal protein S13 [Escherichia coli UTI89] gi|110643537|ref|YP_671267.1| 30S ribosomal protein S13 [Escherichia coli 536] gi|110807146|ref|YP_690666.1| 30S ribosomal protein S13 [Shigella flexneri 5 str. 8401] gi|117625580|ref|YP_858903.1| 30S ribosomal protein S13 [Escherichia coli APEC O1] gi|157156782|ref|YP_001464766.1| 30S ribosomal protein S13 [Escherichia coli E24377A] gi|157162772|ref|YP_001460090.1| 30S ribosomal protein S13 [Escherichia coli HS] gi|168752252|ref|ZP_02777274.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113] gi|168758526|ref|ZP_02783533.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401] gi|168764981|ref|ZP_02789988.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501] gi|168769160|ref|ZP_02794167.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486] gi|168777843|ref|ZP_02802850.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196] gi|168783866|ref|ZP_02808873.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076] gi|168786188|ref|ZP_02811195.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869] gi|168802727|ref|ZP_02827734.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508] gi|170018466|ref|YP_001723420.1| 30S ribosomal protein S13 [Escherichia coli ATCC 8739] gi|170082818|ref|YP_001732138.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. DH10B] gi|170683249|ref|YP_001745560.1| 30S ribosomal protein S13 [Escherichia coli SMS-3-5] gi|187730609|ref|YP_001881983.1| 30S ribosomal protein S13 [Shigella boydii CDC 3083-94] gi|188496196|ref|ZP_03003466.1| ribosomal protein S13p [Escherichia coli 53638] gi|191169310|ref|ZP_03031059.1| ribosomal protein S13p [Escherichia coli B7A] gi|191174461|ref|ZP_03035962.1| ribosomal protein S13p [Escherichia coli F11] gi|193066496|ref|ZP_03047540.1| ribosomal protein S13p [Escherichia coli E22] gi|193071552|ref|ZP_03052461.1| ribosomal protein S13p [Escherichia coli E110019] gi|194430277|ref|ZP_03062772.1| ribosomal protein S13p [Escherichia coli B171] gi|194435062|ref|ZP_03067300.1| ribosomal protein S13p [Shigella dysenteriae 1012] gi|194440008|ref|ZP_03072066.1| ribosomal protein S13p [Escherichia coli 101-1] gi|195939846|ref|ZP_03085228.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC4024] gi|208809664|ref|ZP_03252001.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206] gi|208814033|ref|ZP_03255362.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045] gi|208818664|ref|ZP_03258984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042] gi|209398653|ref|YP_002272754.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115] gi|209920764|ref|YP_002294848.1| 30S ribosomal protein S13 [Escherichia coli SE11] gi|215488598|ref|YP_002331029.1| 30S ribosomal protein S13 [Escherichia coli O127:H6 str. E2348/69] gi|217325692|ref|ZP_03441776.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588] gi|218550574|ref|YP_002384365.1| 30S ribosomal protein S13 [Escherichia fergusonii ATCC 35469] gi|218555856|ref|YP_002388769.1| 30S ribosomal protein S13 [Escherichia coli IAI1] gi|218560360|ref|YP_002393273.1| 30S ribosomal protein S13 [Escherichia coli S88] gi|218691585|ref|YP_002399797.1| 30S ribosomal protein S13 [Escherichia coli ED1a] gi|218696991|ref|YP_002404658.1| 30S ribosomal protein S13 [Escherichia coli 55989] gi|218702061|ref|YP_002409690.1| 30S ribosomal protein S13 [Escherichia coli IAI39] gi|218706906|ref|YP_002414425.1| 30S ribosomal protein S13 [Escherichia coli UMN026] gi|237703028|ref|ZP_04533509.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA] gi|238902389|ref|YP_002928185.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952] gi|253771878|ref|YP_003034709.1| 30S ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038459|ref|ZP_04872515.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43] gi|254163226|ref|YP_003046334.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606] gi|254795235|ref|YP_003080072.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. TW14359] gi|256020657|ref|ZP_05434522.1| 30S ribosomal protein S13 [Shigella sp. D9] gi|256025974|ref|ZP_05439839.1| 30S ribosomal protein S13 [Escherichia sp. 4_1_40B] gi|260846096|ref|YP_003223874.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str. 12009] gi|260857419|ref|YP_003231310.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str. 11368] gi|260870041|ref|YP_003236443.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str. 11128] gi|261224603|ref|ZP_05938884.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. FRIK2000] gi|261254503|ref|ZP_05947036.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. FRIK966] gi|291284656|ref|YP_003501474.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615] gi|293406895|ref|ZP_06650819.1| rps13 [Escherichia coli FVEC1412] gi|293412717|ref|ZP_06655385.1| 30S ribosomal protein S13 [Escherichia coli B354] gi|297516786|ref|ZP_06935172.1| 30S ribosomal protein S13 [Escherichia coli OP50] gi|298382636|ref|ZP_06992231.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302] gi|306816359|ref|ZP_07450497.1| 30S ribosomal protein S13 [Escherichia coli NC101] gi|307139981|ref|ZP_07499337.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|307315123|ref|ZP_07594706.1| 30S ribosomal protein S13 [Escherichia coli W] gi|309785620|ref|ZP_07680251.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617] gi|312968377|ref|ZP_07782587.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75] gi|312972441|ref|ZP_07786615.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70] gi|331643994|ref|ZP_08345123.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|331649095|ref|ZP_08350181.1| 30S ribosomal protein S13 [Escherichia coli M605] gi|331654891|ref|ZP_08355890.1| 30S ribosomal protein S13 [Escherichia coli M718] gi|331659588|ref|ZP_08360526.1| 30S ribosomal protein S13 [Escherichia coli TA206] gi|331664911|ref|ZP_08365812.1| 30S ribosomal protein S13 [Escherichia coli TA143] gi|331670127|ref|ZP_08370966.1| 30S ribosomal protein S13 [Escherichia coli TA271] gi|331679367|ref|ZP_08380037.1| 30S ribosomal protein S13 [Escherichia coli H591] gi|331684940|ref|ZP_08385526.1| 30S ribosomal protein S13 [Escherichia coli H299] gi|67472364|sp|P0A7S9|RS13_ECOLI RecName: Full=30S ribosomal protein S13 gi|67472365|sp|P0A7T0|RS13_ECOL6 RecName: Full=30S ribosomal protein S13 gi|67472366|sp|P0A7T1|RS13_ECO57 RecName: Full=30S ribosomal protein S13 gi|67472367|sp|P0A7T2|RS13_SHIFL RecName: Full=30S ribosomal protein S13 gi|91207724|sp|Q31VX8|RS13_SHIBS RecName: Full=30S ribosomal protein S13 gi|91207725|sp|Q32B53|RS13_SHIDS RecName: Full=30S ribosomal protein S13 gi|91207726|sp|Q3YWW1|RS13_SHISS RecName: Full=30S ribosomal protein S13 gi|122422201|sp|Q1R633|RS13_ECOUT RecName: Full=30S ribosomal protein S13 gi|122957162|sp|Q0T004|RS13_SHIF8 RecName: Full=30S ribosomal protein S13 gi|123343548|sp|Q0TCG3|RS13_ECOL5 RecName: Full=30S ribosomal protein S13 gi|158706229|sp|A1AGI9|RS13_ECOK1 RecName: Full=30S ribosomal protein S13 gi|116666560|pdb|1VS5|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666612|pdb|1VS7|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032356|pdb|3E1A|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032413|pdb|3E1C|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097334|pdb|3I1M|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097386|pdb|3I1O|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097438|pdb|3I1Q|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097492|pdb|3I1S|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097546|pdb|3I1Z|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097601|pdb|3I21|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560319|pdb|3KC4|M Chain M, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|305677712|pdb|3IYX|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures Fitted Into The Cryo-Em Map Of E.Coli 70s Ribosome (Emd-1056) gi|305677717|pdb|3IYY|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures Fitted Into The Cryo-Em Map Of Efg.Gdpnp-Bound E.Coli 70s Ribosome(Emd-1363) gi|308198699|pdb|3OR9|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198720|pdb|3ORA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634291|pdb|3IZV|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634316|pdb|3IZW|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|12517927|gb|AAG58419.1|AE005556_12 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. EDL933] gi|26110312|gb|AAN82498.1|AE016767_258 30S ribosomal protein S13 [Escherichia coli CFT073] gi|581217|emb|CAA26392.1| unnamed protein product [Escherichia coli] gi|606230|gb|AAA58093.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|1789693|gb|AAC76323.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|13363636|dbj|BAB37586.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. Sakai] gi|24053772|gb|AAN44793.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 301] gi|30043663|gb|AAP19383.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 2457T] gi|73857294|gb|AAZ90001.1| 30S ribosomal subunit protein S13 [Shigella sonnei Ss046] gi|81242742|gb|ABB63452.1| 30S ribosomal subunit protein S13 [Shigella dysenteriae Sd197] gi|81247072|gb|ABB67780.1| 30S ribosomal subunit protein S13 [Shigella boydii Sb227] gi|85676743|dbj|BAE77993.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K12 substr. W3110] gi|91074300|gb|ABE09181.1| 30S ribosomal subunit protein S13 [Escherichia coli UTI89] gi|110345129|gb|ABG71366.1| 30S ribosomal protein S13 [Escherichia coli 536] gi|110616694|gb|ABF05361.1| 30S ribosomal subunit protein S13 [Shigella flexneri 5 str. 8401] gi|115514704|gb|ABJ02779.1| 30S ribosomal subunit protein S13 [Escherichia coli APEC O1] gi|157068452|gb|ABV07707.1| ribosomal protein S13p [Escherichia coli HS] gi|157078812|gb|ABV18520.1| ribosomal protein S13p [Escherichia coli E24377A] gi|169753394|gb|ACA76093.1| ribosomal protein S13 [Escherichia coli ATCC 8739] gi|169890653|gb|ACB04360.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. DH10B] gi|170520967|gb|ACB19145.1| ribosomal protein S13p [Escherichia coli SMS-3-5] gi|187427601|gb|ACD06875.1| ribosomal protein S13p [Shigella boydii CDC 3083-94] gi|187767000|gb|EDU30844.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196] gi|188013862|gb|EDU51984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113] gi|188491395|gb|EDU66498.1| ribosomal protein S13p [Escherichia coli 53638] gi|188998874|gb|EDU67860.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076] gi|189354683|gb|EDU73102.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401] gi|189361860|gb|EDU80279.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486] gi|189365118|gb|EDU83534.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501] gi|189373930|gb|EDU92346.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869] gi|189375354|gb|EDU93770.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508] gi|190900665|gb|EDV60465.1| ribosomal protein S13p [Escherichia coli B7A] gi|190905269|gb|EDV64907.1| ribosomal protein S13p [Escherichia coli F11] gi|192925877|gb|EDV80527.1| ribosomal protein S13p [Escherichia coli E22] gi|192955140|gb|EDV85634.1| ribosomal protein S13p [Escherichia coli E110019] gi|194411666|gb|EDX27993.1| ribosomal protein S13p [Escherichia coli B171] gi|194416669|gb|EDX32800.1| ribosomal protein S13p [Shigella dysenteriae 1012] gi|194421060|gb|EDX37089.1| ribosomal protein S13p [Escherichia coli 101-1] gi|208729465|gb|EDZ79066.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206] gi|208735310|gb|EDZ83997.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045] gi|208738787|gb|EDZ86469.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042] gi|209160053|gb|ACI37486.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115] gi|209757258|gb|ACI76941.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757260|gb|ACI76942.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757262|gb|ACI76943.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757264|gb|ACI76944.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757266|gb|ACI76945.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209914023|dbj|BAG79097.1| 30S ribosomal protein S13 [Escherichia coli SE11] gi|215266670|emb|CAS11109.1| 30S ribosomal subunit protein S13 [Escherichia coli O127:H6 str. E2348/69] gi|217321913|gb|EEC30337.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588] gi|218353723|emb|CAV00002.1| 30S ribosomal subunit protein S13 [Escherichia coli 55989] gi|218358115|emb|CAQ90762.1| 30S ribosomal subunit protein S13 [Escherichia fergusonii ATCC 35469] gi|218362624|emb|CAR00250.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI1] gi|218367129|emb|CAR04903.1| 30S ribosomal subunit protein S13 [Escherichia coli S88] gi|218372047|emb|CAR19907.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI39] gi|218429149|emb|CAR10101.2| 30S ribosomal subunit protein S13 [Escherichia coli ED1a] gi|218434003|emb|CAR14920.1| 30S ribosomal subunit protein S13 [Escherichia coli UMN026] gi|222035007|emb|CAP77750.1| 30S ribosomal protein S13 [Escherichia coli LF82] gi|226838965|gb|EEH70988.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43] gi|226902292|gb|EEH88551.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA] gi|238859787|gb|ACR61785.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952] gi|242378825|emb|CAQ33617.1| 30S ribosomal subunit protein S13, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322922|gb|ACT27524.1| ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975127|gb|ACT40798.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606] gi|253979283|gb|ACT44953.1| 30S ribosomal protein S13 [Escherichia coli BL21(DE3)] gi|254594635|gb|ACT73996.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. TW14359] gi|257756068|dbj|BAI27570.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str. 11368] gi|257761243|dbj|BAI32740.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str. 12009] gi|257766397|dbj|BAI37892.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str. 11128] gi|260447683|gb|ACX38105.1| short-chain dehydrogenase/reductase SDR [Escherichia coli DH1] gi|281180333|dbj|BAI56663.1| 30S ribosomal protein S13 [Escherichia coli SE15] gi|281602663|gb|ADA75647.1| 30S ribosomal protein S13 [Shigella flexneri 2002017] gi|284923304|emb|CBG36398.1| 30S ribosomal subunit protein S13 [Escherichia coli 042] gi|290764529|gb|ADD58490.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615] gi|291425706|gb|EFE98740.1| rps13 [Escherichia coli FVEC1412] gi|291468364|gb|EFF10857.1| 30S ribosomal protein S13 [Escherichia coli B354] gi|294492834|gb|ADE91590.1| ribosomal protein S13p [Escherichia coli IHE3034] gi|298276472|gb|EFI17990.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302] gi|305850755|gb|EFM51212.1| 30S ribosomal protein S13 [Escherichia coli NC101] gi|306905472|gb|EFN36007.1| 30S ribosomal protein S13 [Escherichia coli W] gi|307555386|gb|ADN48161.1| 30S ribosomal subunit protein S13 [Escherichia coli ABU 83972] gi|307628333|gb|ADN72637.1| 30S ribosomal protein S13 [Escherichia coli UM146] gi|308926740|gb|EFP72216.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617] gi|309703710|emb|CBJ03051.1| 30S ribosomal subunit protein S13 [Escherichia coli ETEC H10407] gi|310334818|gb|EFQ01023.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70] gi|312287202|gb|EFR15112.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75] gi|312947849|gb|ADR28676.1| 30S ribosomal protein S13 [Escherichia coli O83:H1 str. NRG 857C] gi|313647392|gb|EFS11844.1| ribosomal S13/S18 family protein [Shigella flexneri 2a str. 2457T] gi|315062590|gb|ADT76917.1| 30S ribosomal subunit protein S13 [Escherichia coli W] gi|315137873|dbj|BAJ45032.1| 30S ribosomal protein S13 [Escherichia coli DH1] gi|315617100|gb|EFU97710.1| ribosomal S13/S18 family protein [Escherichia coli 3431] gi|320173942|gb|EFW49118.1| 30S ribosomal protein S13 [Shigella dysenteriae CDC 74-1112] gi|320182704|gb|EFW57590.1| 30S ribosomal protein S13 [Shigella boydii ATCC 9905] gi|320187019|gb|EFW61731.1| 30S ribosomal protein S13 [Shigella flexneri CDC 796-83] gi|320191668|gb|EFW66318.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC1212] gi|320195390|gb|EFW70017.1| 30S ribosomal protein S13 [Escherichia coli WV_060327] gi|320199485|gb|EFW74075.1| 30S ribosomal protein S13 [Escherichia coli EC4100B] gi|320639603|gb|EFX09197.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. G5101] gi|320645101|gb|EFX14117.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. 493-89] gi|320650412|gb|EFX18878.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. H 2687] gi|320655937|gb|EFX23857.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661389|gb|EFX28804.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. USDA 5905] gi|320666411|gb|EFX33394.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. LSU-61] gi|323154136|gb|EFZ40339.1| ribosomal S13/S18 family protein [Escherichia coli EPECa14] gi|323162977|gb|EFZ48812.1| ribosomal protein S13/S18 family protein [Escherichia coli E128010] gi|323164862|gb|EFZ50653.1| ribosomal S13/S18 family protein [Shigella sonnei 53G] gi|323173934|gb|EFZ59562.1| ribosomal protein S13/S18 family protein [Escherichia coli LT-68] gi|323179166|gb|EFZ64740.1| ribosomal protein S13/S18 family protein [Escherichia coli 1180] gi|323182776|gb|EFZ68177.1| ribosomal protein S13/S18 family protein [Escherichia coli 1357] gi|323189097|gb|EFZ74381.1| ribosomal protein S13/S18 family protein [Escherichia coli RN587/1] gi|323376823|gb|ADX49091.1| 30S ribosomal protein S13 [Escherichia coli KO11] gi|323934503|gb|EGB30911.1| 30S ribosomal protein S13 [Escherichia coli E1520] gi|323939280|gb|EGB35492.1| 30S ribosomal protein S13 [Escherichia coli E482] gi|323944281|gb|EGB40357.1| 30S ribosomal protein S13 [Escherichia coli H120] gi|323950212|gb|EGB46094.1| 30S ribosomal protein S13 [Escherichia coli H252] gi|323954579|gb|EGB50362.1| 30S ribosomal protein S13 [Escherichia coli H263] gi|323959551|gb|EGB55204.1| 30S ribosomal protein S13 [Escherichia coli H489] gi|323966260|gb|EGB61695.1| 30S ribosomal protein S13 [Escherichia coli M863] gi|323970102|gb|EGB65376.1| 30S ribosomal protein S13 [Escherichia coli TA007] gi|323974749|gb|EGB69862.1| 30S ribosomal protein S13 [Escherichia coli TW10509] gi|324111977|gb|EGC05956.1| 30S ribosomal protein S13 [Escherichia fergusonii B253] gi|324116312|gb|EGC10232.1| 30S ribosomal protein S13 [Escherichia coli E1167] gi|325498867|gb|EGC96726.1| 30S ribosomal protein S13 [Escherichia fergusonii ECD227] gi|326342546|gb|EGD66320.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1044] gi|326344533|gb|EGD68282.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1125] gi|327250946|gb|EGE62639.1| ribosomal protein S13/S18 family protein [Escherichia coli STEC_7v] gi|330909342|gb|EGH37856.1| SSU ribosomal protein S13p (S18e) [Escherichia coli AA86] gi|331036288|gb|EGI08514.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|331041593|gb|EGI13737.1| 30S ribosomal protein S13 [Escherichia coli M605] gi|331046906|gb|EGI18984.1| 30S ribosomal protein S13 [Escherichia coli M718] gi|331052803|gb|EGI24836.1| 30S ribosomal protein S13 [Escherichia coli TA206] gi|331057421|gb|EGI29407.1| 30S ribosomal protein S13 [Escherichia coli TA143] gi|331062189|gb|EGI34109.1| 30S ribosomal protein S13 [Escherichia coli TA271] gi|331072539|gb|EGI43864.1| 30S ribosomal protein S13 [Escherichia coli H591] gi|331077311|gb|EGI48523.1| 30S ribosomal protein S13 [Escherichia coli H299] gi|332085447|gb|EGI90613.1| ribosomal protein S13/S18 family protein [Shigella boydii 5216-82] gi|332086267|gb|EGI91423.1| ribosomal protein S13/S18 family protein [Shigella dysenteriae 155-74] gi|332090433|gb|EGI95531.1| ribosomal protein S13/S18 family protein [Shigella boydii 3594-74] gi|332104205|gb|EGJ07551.1| ribosomal protein S13p [Shigella sp. D9] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|50122929|ref|YP_052096.1| 30S ribosomal protein S13 [Pectobacterium atrosepticum SCRI1043] gi|81643772|sp|Q6CZZ2|RS13_ERWCT RecName: Full=30S ribosomal protein S13 gi|49613455|emb|CAG76906.1| 30S ribosomal subunit protein S13 [Pectobacterium atrosepticum SCRI1043] Length = 118 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATEIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|256380570|ref|YP_003104230.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827] gi|255924873|gb|ACU40384.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827] Length = 126 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ I P+ RV L + ++ ++R I Sbjct: 1 MARLAGVDLPREKRLEIALTYIFGIGRTRSKELLKATEISPDLRVKDLGDDDLAKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ +++EGDLRR + +I+R M++GCY GLRHRR LPVRGQRT TNARTRK Sbjct: 61 EEHFKLEGDLRREIQADIRRKMEIGCYEGLRHRRNLPVRGQRTKTNARTRK 111 >gi|254281884|ref|ZP_04956852.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B] gi|219678087|gb|EED34436.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B] Length = 118 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++ +C + +V L E ++ Q+R + Sbjct: 1 MARIAGVNIPDHKHAVVSLTYIYGVGRTQAKKLCAVTGVDEATKVADLNEGQLDQLRSLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 SE-MTIEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRK 110 >gi|270291110|ref|ZP_06197333.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4] gi|304385390|ref|ZP_07367735.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284] gi|270280506|gb|EFA26341.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4] gi|304328597|gb|EFL95818.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284] Length = 121 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNTTAQKILKDADVSEDVRVRDLTADQEDKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|257866552|ref|ZP_05646205.1| ribosomal protein S13 [Enterococcus casseliflavus EC30] gi|257872932|ref|ZP_05652585.1| ribosomal protein S13 [Enterococcus casseliflavus EC10] gi|257876156|ref|ZP_05655809.1| ribosomal protein S13 [Enterococcus casseliflavus EC20] gi|325567353|ref|ZP_08144020.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755] gi|257800510|gb|EEV29538.1| ribosomal protein S13 [Enterococcus casseliflavus EC30] gi|257807096|gb|EEV35918.1| ribosomal protein S13 [Enterococcus casseliflavus EC10] gi|257810322|gb|EEV39142.1| ribosomal protein S13 [Enterococcus casseliflavus EC20] gi|325158786|gb|EGC70932.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755] Length = 121 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILADAGVSEEVRVRDLTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116873974|ref|YP_850755.1| 30S ribosomal protein S13 [Listeria welshimeri serovar 6b str. SLCC5334] gi|123464194|sp|A0ALU4|RS13_LISW6 RecName: Full=30S ribosomal protein S13 gi|116742852|emb|CAK21976.1| ribosomal protein S13 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 121 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 61/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ ++ + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASEVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|282882509|ref|ZP_06291130.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B] gi|300814677|ref|ZP_07094928.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297651|gb|EFA90126.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B] gi|300511296|gb|EFK38545.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 120 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/111 (60%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG SQ I + + RV L E+E+ +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRSRSQKILKDADVNFDTRVKDLTEAELGRIRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK Sbjct: 61 -QKYHVEGDLRRDVAMNIKRLREINCYRGRRHKAGLPVRGQKTKTNARTRK 110 >gi|156743924|ref|YP_001434053.1| 30S ribosomal protein S13 [Roseiflexus castenholzii DSM 13941] gi|189044291|sp|A7NR39|RS13_ROSCS RecName: Full=30S ribosomal protein S13 gi|156235252|gb|ABU60035.1| ribosomal protein S13 [Roseiflexus castenholzii DSM 13941] Length = 127 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/100 (59%), Positives = 75/100 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + A+ YI GIG + D+ K + P RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRNKTIEIAITYIFGIGRSNGADVLRKANVNPATRVRDLTEEEVSRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+GLPVRG Sbjct: 61 EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGLPVRG 100 >gi|16766707|ref|NP_462322.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56415337|ref|YP_152412.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|157148873|ref|YP_001456192.1| 30S ribosomal protein S13 [Citrobacter koseri ATCC BAA-895] gi|168264700|ref|ZP_02686673.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168468024|ref|ZP_02701861.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445617|ref|YP_002042669.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449228|ref|YP_002047442.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471891|ref|ZP_03077875.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738391|ref|YP_002116361.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251517|ref|YP_002148338.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265972|ref|ZP_03166046.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364267|ref|YP_002143904.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245668|ref|YP_002217381.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386749|ref|ZP_03213361.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354954|ref|YP_002228755.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858660|ref|YP_002245311.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913867|ref|ZP_04657704.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25009167|sp|Q8ZLM1|RS13_SALTY RecName: Full=30S ribosomal protein S13 gi|81361068|sp|Q5PK07|RS13_SALPA RecName: Full=30S ribosomal protein S13 gi|16421974|gb|AAL22281.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129594|gb|AAV79100.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|157086078|gb|ABV15756.1| hypothetical protein CKO_04711 [Citrobacter koseri ATCC BAA-895] gi|194404280|gb|ACF64502.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407532|gb|ACF67751.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458255|gb|EDX47094.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713893|gb|ACF93114.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628910|gb|EDX48320.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095744|emb|CAR61314.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215220|gb|ACH52617.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244227|gb|EDY26847.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940184|gb|ACH77517.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603847|gb|EDZ02392.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274735|emb|CAR39791.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205346873|gb|EDZ33504.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710463|emb|CAR34821.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248575|emb|CBG26413.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995627|gb|ACY90512.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159961|emb|CBW19480.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914441|dbj|BAJ38415.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087863|emb|CBY97626.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615041|gb|EFY11965.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617328|gb|EFY14229.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625550|gb|EFY22375.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626392|gb|EFY23201.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632096|gb|EFY28849.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635025|gb|EFY31748.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643274|gb|EFY39841.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646642|gb|EFY43149.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649988|gb|EFY46407.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652705|gb|EFY49045.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659538|gb|EFY55782.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665520|gb|EFY61707.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670414|gb|EFY66553.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670487|gb|EFY66621.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675063|gb|EFY71146.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681600|gb|EFY77629.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685944|gb|EFY81933.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716409|gb|EFZ07980.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131776|gb|ADX19206.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195814|gb|EFZ80987.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196430|gb|EFZ81581.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202331|gb|EFZ87376.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207320|gb|EFZ92270.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211244|gb|EFZ96089.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216047|gb|EGA00778.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223462|gb|EGA07790.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226808|gb|EGA10998.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231830|gb|EGA15940.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233217|gb|EGA17312.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237284|gb|EGA21349.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245519|gb|EGA29518.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249025|gb|EGA32947.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250648|gb|EGA34529.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256877|gb|EGA40591.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263026|gb|EGA46573.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266026|gb|EGA49521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272783|gb|EGA56186.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630103|gb|EGE36446.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 118 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|332040530|gb|EGI76906.1| 30S ribosomal protein S13 [Hylemonella gracilis ATCC 19624] Length = 121 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC IP ++V L +++ +IR I Sbjct: 1 MARIAGINIPPHQHTEIGLTAIFGIGRTRARKICVACGIPFSKKVKDLTDADQEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG+RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGMRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|212704606|ref|ZP_03312734.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098] gi|212672005|gb|EEB32488.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098] Length = 108 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 60/105 (57%), Positives = 78/105 (74%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG ++ I + + ER + L EV +IR+ +EQ+Y+VEGDLRR ++ N Sbjct: 4 ALTYIYGIGRATALQILSTTGVNWERNIDDLSADEVNEIRKELEQNYKVEGDLRREISTN 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 IKRLMD+GC+RGLRHRRGLPV GQRTHTNARTRK +G V +K+ Sbjct: 64 IKRLMDIGCFRGLRHRRGLPVHGQRTHTNARTRKGPRRGVVGKKK 108 >gi|268316432|ref|YP_003290151.1| 30S ribosomal protein S13 [Rhodothermus marinus DSM 4252] gi|262333966|gb|ACY47763.1| ribosomal protein S13 [Rhodothermus marinus DSM 4252] Length = 126 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+IP KR AL I+GIG +++I +++ + P R E + +IR+ I Sbjct: 1 MPRIAGVDIPLHKRGEIALTAIYGIGKSRAKEILSRVGLDPNTRPKDWTEEQTREIRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EQ+Y VEG LR + MNIKRLMD+GCYRG+RHR GLPVRGQRT TNARTRK Sbjct: 61 EQEYVVEGQLRAEIQMNIKRLMDIGCYRGIRHRLGLPVRGQRTRTNARTRK 111 >gi|269796229|ref|YP_003315684.1| 30S ribosomal protein S13P [Sanguibacter keddieii DSM 10542] gi|269098414|gb|ACZ22850.1| SSU ribosomal protein S13P [Sanguibacter keddieii DSM 10542] Length = 124 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G +Q I P+ RV L ++E++ +R + Sbjct: 1 MARLIGVDLPRDKRLEVALTYIFGVGRTRAQQTLAATGISPDVRVKDLGDAELVSLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|193214823|ref|YP_001996022.1| 30S ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110] gi|226712715|sp|B3QYE7|RS13_CHLT3 RecName: Full=30S ribosomal protein S13 gi|193088300|gb|ACF13575.1| ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110] Length = 125 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGV++PR K VV L Y++GIG +++ I K +P +++V ++ + E +IR + Sbjct: 2 RIAGVDLPRNKHVVIGLTYVYGIGRTTAKKILAKAGVPEDKKVSEVTDDEANEIRTIVTN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG R + IKRLMD+GCYRGLRHRRGLP RGQRT TNARTRK Sbjct: 62 EYKVEGQARSEQQLAIKRLMDIGCYRGLRHRRGLPARGQRTRTNARTRK 110 >gi|165977218|ref|YP_001652811.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|167855328|ref|ZP_02478096.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755] gi|190151136|ref|YP_001969661.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|219871574|ref|YP_002475949.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165] gi|223042025|ref|ZP_03612206.1| 30S ribosomal protein S13 [Actinobacillus minor 202] gi|240948153|ref|ZP_04752556.1| 30S ribosomal protein S13 [Actinobacillus minor NM305] gi|254362775|ref|ZP_04978857.1| ribosomal protein S13 [Mannheimia haemolytica PHL213] gi|261492714|ref|ZP_05989262.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495671|ref|ZP_05992117.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. OVINE] gi|303250034|ref|ZP_07336236.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253208|ref|ZP_07339357.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246711|ref|ZP_07528781.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248852|ref|ZP_07530865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251080|ref|ZP_07533004.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253466|ref|ZP_07535337.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255696|ref|ZP_07537500.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257880|ref|ZP_07539636.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260148|ref|ZP_07541858.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262276|ref|ZP_07543925.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264485|ref|ZP_07546070.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|153094404|gb|EDN75253.1| ribosomal protein S13 [Mannheimia haemolytica PHL213] gi|165877319|gb|ABY70367.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|167853586|gb|EDS24832.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755] gi|189916267|gb|ACE62519.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|219691778|gb|ACL33001.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165] gi|223017187|gb|EEF15618.1| 30S ribosomal protein S13 [Actinobacillus minor 202] gi|240297506|gb|EER48013.1| 30S ribosomal protein S13 [Actinobacillus minor NM305] gi|261308778|gb|EEY10035.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311567|gb|EEY12722.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|302647890|gb|EFL78097.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651097|gb|EFL81251.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852411|gb|EFM84646.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854779|gb|EFM86969.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856910|gb|EFM89042.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859145|gb|EFM91187.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861373|gb|EFM93363.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863610|gb|EFM95537.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865794|gb|EFM97672.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868039|gb|EFM99866.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870182|gb|EFN01941.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 118 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|312199995|ref|YP_004020056.1| 30S ribosomal protein S13 [Frankia sp. EuI1c] gi|311231331|gb|ADP84186.1| 30S ribosomal protein S13 [Frankia sp. EuI1c] Length = 126 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV L YI GIG +++ + P+ RV L E EVI++R+ I Sbjct: 1 MARLSGVDLPREKRVEIGLTYIFGIGRTRAKETLVATGVNPDTRVRDLSEDEVIRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDL+R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK Sbjct: 61 DGHYRVEGDLQREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111 >gi|313889578|ref|ZP_07823223.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026] gi|313122087|gb|EFR45181.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026] Length = 121 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +SQ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|255067436|ref|ZP_05319291.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256] gi|261380581|ref|ZP_05985154.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703] gi|319639571|ref|ZP_07994318.1| 30S ribosomal protein S13 [Neisseria mucosa C102] gi|255048231|gb|EET43695.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256] gi|284796549|gb|EFC51896.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703] gi|317399142|gb|EFV79816.1| 30S ribosomal protein S13 [Neisseria mucosa C102] Length = 120 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|311277747|ref|YP_003939978.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1] gi|308746942|gb|ADO46694.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1] Length = 118 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|90414978|ref|ZP_01222940.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK] gi|90323917|gb|EAS40517.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK] Length = 118 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ + + I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|320533219|ref|ZP_08033933.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str. F0337] gi|326773988|ref|ZP_08233270.1| 30S ribosomal protein S13 [Actinomyces viscosus C505] gi|320134569|gb|EFW26803.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str. F0337] gi|326636127|gb|EGE37031.1| 30S ribosomal protein S13 [Actinomyces viscosus C505] Length = 136 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I Sbjct: 13 VARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 72 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK Sbjct: 73 DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 123 >gi|167748454|ref|ZP_02420581.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662] gi|317472013|ref|ZP_07931345.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA] gi|167652446|gb|EDR96575.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662] gi|316900417|gb|EFV22399.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA] Length = 122 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 79/109 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS+ I ++ + P+ RV L + EV +I + I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILSEANVNPDTRVRDLTDDEVRRISEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + VEGDLRR +A+NIKRL ++G YRG RHR+GLP RGQ+T TNART Sbjct: 61 SESQTVEGDLRREIALNIKRLKEIGSYRGKRHRQGLPCRGQKTKTNART 109 >gi|254302863|ref|ZP_04970221.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323055|gb|EDK88305.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 118 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|42561248|ref|NP_975699.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400483|sp|Q6MSP7|RS13_MYCMS RecName: Full=30S ribosomal protein S13 gi|42492746|emb|CAE77341.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321045|gb|ADK69688.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 121 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+ EG LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K Sbjct: 61 SK-YKTEGKLRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110 >gi|145588264|ref|YP_001154861.1| 30S ribosomal protein S13 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189044286|sp|A4SUY3|RS13_POLSQ RecName: Full=30S ribosomal protein S13 gi|145046670|gb|ABP33297.1| SSU ribosomal protein S13P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 121 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I GIG + IC + +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIFGIGTTRANKICQTTGVAIDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V M+IKRLMDLGCYRG+RHR+GLPVRGQRT TNARTRK K GV Sbjct: 61 GK-FITEGDLRREVTMSIKRLMDLGCYRGVRHRKGLPVRGQRTKTNARTRKGPRKSGVQL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|149371652|ref|ZP_01891068.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49] gi|149355279|gb|EDM43839.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49] Length = 124 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG S+ I K + +++V++ + E+ IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGNSRSKAILEKAGVSEDKKVNEWNDEEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 -GSFTIEGELRSEVQLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110 >gi|148284193|ref|YP_001248283.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong] gi|158706339|sp|A5CCJ1|RS13_ORITB RecName: Full=30S ribosomal protein S13 gi|146739632|emb|CAM79421.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong] Length = 125 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+RI+ VN+P KRV+ L YI+GIG ++Q IC ++ + ++V L E++ +R I Sbjct: 1 MSRISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Y+VEGDLRR + +NIK+ D+ CY GLRH R LPVRGQ TH+NARTRK Sbjct: 61 ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRK 111 >gi|16762865|ref|NP_458482.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144352|ref|NP_807694.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052886|ref|ZP_03345764.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425773|ref|ZP_03358523.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580695|ref|ZP_03362521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213856917|ref|ZP_03384157.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824203|ref|ZP_06543798.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25009165|sp|Q8Z1X6|RS13_SALTI RecName: Full=30S ribosomal protein S13 gi|25294720|pir||AG1008 30S ribosomal chain protein S13 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505172|emb|CAD09168.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139990|gb|AAO71554.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 118 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|311896538|dbj|BAJ28946.1| putative ribosomal protein S13 [Kitasatospora setae KM-6054] Length = 126 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KR+ AL Y++GIG +Q + + + RV + E +++++++ + Sbjct: 1 MARLSGVDLPREKRIEIALTYVYGIGKTRAQLALAETGVSGDIRVRDISEDDLVKLQKFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++VEGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRTHTNARTRK Sbjct: 61 DANFEVEGDLRRQVAADIRRKVEIGCYEGLRHRRGLPVRGQRTHTNARTRK 111 >gi|148655313|ref|YP_001275518.1| 30S ribosomal protein S13 [Roseiflexus sp. RS-1] gi|166231922|sp|A5USG5|RS13_ROSS1 RecName: Full=30S ribosomal protein S13 gi|148567423|gb|ABQ89568.1| SSU ribosomal protein S13P [Roseiflexus sp. RS-1] Length = 127 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 58/100 (58%), Positives = 76/100 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ A+ YI GIG + ++ K + P RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIAITYIFGIGRSNGAEVLRKANVNPATRVRDLTEEEVSRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+G+PVRG Sbjct: 61 EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGMPVRG 100 >gi|83319525|ref|YP_424636.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|313665553|ref|YP_004047424.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50] gi|91207706|sp|Q2SRH7|RS13_MYCCT RecName: Full=30S ribosomal protein S13 gi|83283411|gb|ABC01343.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|312950018|gb|ADR24614.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50] Length = 121 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISIEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K Sbjct: 61 SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110 >gi|34499618|ref|NP_903833.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472] gi|81654192|sp|Q7NQH4|RS13_CHRVO RecName: Full=30S ribosomal protein S13 gi|34105469|gb|AAQ61824.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472] Length = 120 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP V L I G+G +Q IC ++ P +V L E+E+ +R + Sbjct: 1 MARIAGVNIPNHAHAVIGLQAIFGVGQTRAQQICAAASVNPSTKVKDLTEAEMEALRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|298370569|ref|ZP_06981884.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314] gi|298281179|gb|EFI22669.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314] Length = 120 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVNIP VV L I+GIG ++ IC I P +V L E+++ +R+ + Sbjct: 1 MARISGVNIPNNAHVVIGLQAIYGIGTTRAKLICEAAKIAPSIKVKDLDENQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|294497009|ref|YP_003560709.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551] gi|295702374|ref|YP_003595449.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319] gi|294346946|gb|ADE67275.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551] gi|294800033|gb|ADF37099.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319] Length = 121 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG +++ + + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRPTAEKVLAEAGVSEDTRVRDLTEEELGKIRDIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ + NARTRK Sbjct: 61 DS-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRSLPVRGQNSKNNARTRK 110 >gi|227497206|ref|ZP_03927454.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434] gi|226833337|gb|EEH65720.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434] Length = 124 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++ +R I Sbjct: 1 MARISGVDLPREKRVEVALTYIFGIGRTRAHETLAATGVNPDTRVKDLSEDELVLLRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK Sbjct: 61 DANYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 111 >gi|193211875|ref|YP_001997828.1| 30S ribosomal protein S13 [Chlorobaculum parvum NCIB 8327] gi|226712712|sp|B3QR95|RS13_CHLP8 RecName: Full=30S ribosomal protein S13 gi|193085352|gb|ACF10628.1| ribosomal protein S13 [Chlorobaculum parvum NCIB 8327] Length = 125 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL Y++GIG S+++I K + P++++ +L + E IR+ I Sbjct: 2 RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEG+ R ++IKRLMD+GCYRGLRHRR LP RGQRT TNARTRK Sbjct: 62 EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPARGQRTRTNARTRK 110 >gi|224585213|ref|YP_002639012.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469741|gb|ACN47571.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 118 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKIRELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110 >gi|331088681|ref|ZP_08337591.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA] gi|330407204|gb|EGG86707.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA] Length = 122 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 76/109 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 61 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 109 >gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] gi|262066973|ref|ZP_06026585.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693] gi|294782960|ref|ZP_06748286.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA] gi|229421965|gb|EEO37012.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] gi|291379321|gb|EFE86839.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693] gi|294481601|gb|EFG29376.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA] Length = 118 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|225076417|ref|ZP_03719616.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens NRL30031/H210] gi|224952265|gb|EEG33474.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens NRL30031/H210] Length = 120 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E ++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEDQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|320094555|ref|ZP_08026321.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. F0338] gi|319978470|gb|EFW10047.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. F0338] Length = 124 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E E++++R I Sbjct: 1 MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR V +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|22297647|ref|NP_680894.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1] gi|32363319|sp|Q8DML1|RS13_THEEB RecName: Full=30S ribosomal protein S13 gi|22293824|dbj|BAC07656.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1] Length = 126 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K + P+ R L ++++ +R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTRSKEILAKTGVNPDTRTRDLTDADIAALRAAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 ++ YQVEGDLRR AMNIKRLMD+GCYRG RHR GLPVRGQ Sbjct: 61 DE-YQVEGDLRRLEAMNIKRLMDIGCYRGRRHRLGLPVRGQ 100 >gi|154507839|ref|ZP_02043481.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC 17982] gi|293190234|ref|ZP_06608730.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309] gi|315605924|ref|ZP_07880955.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. F0310] gi|153797473|gb|EDN79893.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC 17982] gi|292821050|gb|EFF80003.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309] gi|315312206|gb|EFU60292.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. F0310] Length = 132 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E E++++R I Sbjct: 9 MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 68 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR V +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 69 EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRK 119 >gi|326332224|ref|ZP_08198504.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1] gi|325949930|gb|EGD41990.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1] Length = 125 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+GIG +SQ + + P RVH L E E++++R I Sbjct: 1 MARLQGVDLPRDKRVEIALTYIYGIGRTTSQKLLEATGVNPNTRVHALAEDELVKLRDEI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E Q Q EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EAQGIQTEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 112 >gi|229815746|ref|ZP_04446071.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM 13280] gi|229808662|gb|EEP44439.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM 13280] Length = 124 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR L YI+GIG ++ +C L I R+ L E ++ IR I Sbjct: 1 MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q+ VEGDLRR + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DQNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 112 >gi|295093658|emb|CBK82749.1| 30S ribosomal protein S13 [Coprococcus sp. ART55/1] Length = 122 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SSQ I + + P+ R L + EV ++ + I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR + NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK Sbjct: 61 KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 111 >gi|254429054|ref|ZP_05042761.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881] gi|196195223|gb|EDX90182.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881] Length = 118 Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG + IC I +V +L ++ IR + Sbjct: 1 MARIAGVNIPENKHTVISLTYIFGIGRTRAASICVATGIEQTAKVRELTGEQLDAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRK 110 >gi|328675429|gb|AEB28104.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida 3523] Length = 118 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E +V +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEDQVESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110 >gi|260549818|ref|ZP_05824034.1| ribosomal protein S13 [Acinetobacter sp. RUH2624] gi|293610846|ref|ZP_06693146.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024] gi|260407068|gb|EEX00545.1| ribosomal protein S13 [Acinetobacter sp. RUH2624] gi|292827190|gb|EFF85555.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024] Length = 118 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|153816226|ref|ZP_01968894.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756] gi|317501798|ref|ZP_07959984.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA] gi|145846409|gb|EDK23327.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756] gi|316896831|gb|EFV18916.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 127 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 76/109 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L EV +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 66 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114 >gi|262280203|ref|ZP_06057987.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202] gi|262257981|gb|EEY76715.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202] Length = 118 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILTAVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|56707500|ref|YP_169396.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis SCHU S4] gi|89255692|ref|YP_513053.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica LVS] gi|110669971|ref|YP_666528.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC198] gi|115314192|ref|YP_762915.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica OSU18] gi|118496874|ref|YP_897924.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida U112] gi|134302564|ref|YP_001122534.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501640|ref|YP_001427705.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010991|ref|ZP_02275922.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. holarctica FSC200] gi|187932121|ref|YP_001892106.1| 30S ribosomal protein S13 [Francisella tularensis subsp. mediasiatica FSC147] gi|194324096|ref|ZP_03057870.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida FTE] gi|208780322|ref|ZP_03247663.1| ribosomal protein S13p/S18e [Francisella novicida FTG] gi|224456563|ref|ZP_03665036.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis MA00-2987] gi|254367073|ref|ZP_04983108.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica 257] gi|254368643|ref|ZP_04984658.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FSC022] gi|254370811|ref|ZP_04986816.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC033] gi|254372231|ref|ZP_04987722.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida GA99-3549] gi|254373713|ref|ZP_04989196.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548] gi|254874320|ref|ZP_05247030.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp. tularensis MA00-2987] gi|290953191|ref|ZP_06557812.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica URFT1] gi|295313559|ref|ZP_06804148.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica URFT1] gi|81597922|sp|Q5NHU6|RS13_FRATT RecName: Full=30S ribosomal protein S13 gi|122325770|sp|Q0BNQ6|RS13_FRATO RecName: Full=30S ribosomal protein S13 gi|122501252|sp|Q2A5E8|RS13_FRATH RecName: Full=30S ribosomal protein S13 gi|123169579|sp|Q14J98|RS13_FRAT1 RecName: Full=30S ribosomal protein S13 gi|158706231|sp|A0Q4K5|RS13_FRATN RecName: Full=30S ribosomal protein S13 gi|158706232|sp|A4IZR2|RS13_FRATW RecName: Full=30S ribosomal protein S13 gi|166231912|sp|A7N9U6|RS13_FRATF RecName: Full=30S ribosomal protein S13 gi|226712740|sp|B2SDW3|RS13_FRATM RecName: Full=30S ribosomal protein S13 gi|56603992|emb|CAG44980.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis SCHU S4] gi|89143523|emb|CAJ78699.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica LVS] gi|110320304|emb|CAL08363.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC198] gi|115129091|gb|ABI82278.1| ribosomal protein S13 [Francisella tularensis subsp. holarctica OSU18] gi|118422780|gb|ABK89170.1| 30S ribosomal protein S13 [Francisella novicida U112] gi|134050341|gb|ABO47412.1| ribosomal protein S13 [Francisella tularensis subsp. tularensis WY96-3418] gi|134252898|gb|EBA51992.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica 257] gi|151569054|gb|EDN34708.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC033] gi|151569960|gb|EDN35614.1| 30S ribosomal protein S13 [Francisella novicida GA99-3549] gi|151571434|gb|EDN37088.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548] gi|156252243|gb|ABU60749.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121551|gb|EDO65736.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FSC022] gi|187713030|gb|ACD31327.1| 30S ribosomal protein S13 [Francisella tularensis subsp. mediasiatica FSC147] gi|194321543|gb|EDX19027.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida FTE] gi|208743690|gb|EDZ89993.1| ribosomal protein S13p/S18e [Francisella novicida FTG] gi|254840319|gb|EET18755.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp. tularensis MA00-2987] gi|282158644|gb|ADA78035.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis NE061598] gi|328676343|gb|AEB27213.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida Fx1] Length = 118 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E +V +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEEQVESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110 >gi|56477616|ref|YP_159205.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1] gi|81357336|sp|Q5P310|RS13_AZOSE RecName: Full=30S ribosomal protein S13 gi|56313659|emb|CAI08304.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1] Length = 120 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ + ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAANVVRSVKMKDLTESDMERLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK Sbjct: 61 AK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110 >gi|163816002|ref|ZP_02207372.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759] gi|158448812|gb|EDP25807.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759] Length = 140 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SSQ I + + P+ R L + EV ++ + I Sbjct: 19 MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 78 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR + NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK Sbjct: 79 KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 129 >gi|189485109|ref|YP_001956050.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226712801|sp|B1GZA7|RS13_UNCTG RecName: Full=30S ribosomal protein S13 gi|170287068|dbj|BAG13589.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 130 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AG+++P KR+ AL YI+GIG S +I +L++ P +RV L E EV +I I Sbjct: 1 MARVAGIDLPNNKRLDIALRYIYGIGPAISDEIIKELSLNPAKRVKDLTEEEVGRINNLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V NIKRL+++ YRGLRHRR LPVRGQRT TNARTR+ Sbjct: 61 TKNLKVEGDLRREVQSNIKRLIEIRSYRGLRHRRNLPVRGQRTKTNARTRR 111 >gi|69247193|ref|ZP_00604255.1| Ribosomal protein S13 [Enterococcus faecium DO] gi|227550743|ref|ZP_03980792.1| ribosomal protein S13 [Enterococcus faecium TX1330] gi|257878748|ref|ZP_05658401.1| ribosomal protein S13 [Enterococcus faecium 1,230,933] gi|257881390|ref|ZP_05661043.1| ribosomal protein S13 [Enterococcus faecium 1,231,502] gi|257885657|ref|ZP_05665310.1| ribosomal protein S13 [Enterococcus faecium 1,231,501] gi|257887998|ref|ZP_05667651.1| ribosomal protein S13 [Enterococcus faecium 1,141,733] gi|257890607|ref|ZP_05670260.1| ribosomal protein S13 [Enterococcus faecium 1,231,410] gi|257893198|ref|ZP_05672851.1| ribosomal protein S13 [Enterococcus faecium 1,231,408] gi|257896383|ref|ZP_05676036.1| ribosomal protein S13 [Enterococcus faecium Com12] gi|257899358|ref|ZP_05679011.1| ribosomal protein S13 [Enterococcus faecium Com15] gi|258615187|ref|ZP_05712957.1| 30S ribosomal protein S13 [Enterococcus faecium DO] gi|260558311|ref|ZP_05830507.1| ribosomal protein S13 [Enterococcus faecium C68] gi|261207016|ref|ZP_05921705.1| ribosomal protein S13 [Enterococcus faecium TC 6] gi|289565349|ref|ZP_06445799.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF] gi|293379469|ref|ZP_06625613.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1] gi|293553902|ref|ZP_06674508.1| 30S ribosomal protein S13 [Enterococcus faecium E1039] gi|293562970|ref|ZP_06677437.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162] gi|293567908|ref|ZP_06679249.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071] gi|293570707|ref|ZP_06681757.1| ribosomal protein S13p/S18e [Enterococcus faecium E980] gi|294615370|ref|ZP_06695243.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636] gi|294618296|ref|ZP_06697877.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679] gi|294621102|ref|ZP_06700293.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317] gi|314937632|ref|ZP_07844958.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04] gi|314942869|ref|ZP_07849682.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C] gi|314947995|ref|ZP_07851399.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082] gi|314950912|ref|ZP_07853981.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A] gi|314991440|ref|ZP_07856917.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B] gi|314995039|ref|ZP_07860159.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01] gi|68194958|gb|EAN09426.1| Ribosomal protein S13 [Enterococcus faecium DO] gi|227180204|gb|EEI61176.1| ribosomal protein S13 [Enterococcus faecium TX1330] gi|257812976|gb|EEV41734.1| ribosomal protein S13 [Enterococcus faecium 1,230,933] gi|257817048|gb|EEV44376.1| ribosomal protein S13 [Enterococcus faecium 1,231,502] gi|257821513|gb|EEV48643.1| ribosomal protein S13 [Enterococcus faecium 1,231,501] gi|257824052|gb|EEV50984.1| ribosomal protein S13 [Enterococcus faecium 1,141,733] gi|257826967|gb|EEV53593.1| ribosomal protein S13 [Enterococcus faecium 1,231,410] gi|257829577|gb|EEV56184.1| ribosomal protein S13 [Enterococcus faecium 1,231,408] gi|257832948|gb|EEV59369.1| ribosomal protein S13 [Enterococcus faecium Com12] gi|257837270|gb|EEV62344.1| ribosomal protein S13 [Enterococcus faecium Com15] gi|260075485|gb|EEW63791.1| ribosomal protein S13 [Enterococcus faecium C68] gi|260078644|gb|EEW66346.1| ribosomal protein S13 [Enterococcus faecium TC 6] gi|289162839|gb|EFD10689.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF] gi|291589493|gb|EFF21300.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071] gi|291591744|gb|EFF23380.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636] gi|291595390|gb|EFF26702.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679] gi|291599338|gb|EFF30364.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317] gi|291601954|gb|EFF32200.1| 30S ribosomal protein S13 [Enterococcus faecium E1039] gi|291605096|gb|EFF34563.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162] gi|291609179|gb|EFF38451.1| ribosomal protein S13p/S18e [Enterococcus faecium E980] gi|292641992|gb|EFF60158.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1] gi|313590765|gb|EFR69610.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01] gi|313593920|gb|EFR72765.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B] gi|313596921|gb|EFR75766.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A] gi|313598341|gb|EFR77186.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C] gi|313643009|gb|EFS07589.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04] gi|313645593|gb|EFS10173.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082] Length = 121 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + RV +L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKILADAGVSEDVRVRELTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|171778399|ref|ZP_02919578.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282930|gb|EDT48354.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 121 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|32034697|ref|ZP_00134835.1| COG0099: Ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209245|ref|YP_001054470.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae L20] gi|158706211|sp|A3N379|RS13_ACTP2 RecName: Full=30S ribosomal protein S13 gi|126098037|gb|ABN74865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 118 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAVTGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|239980031|ref|ZP_04702555.1| 30S ribosomal protein S13 [Streptomyces albus J1074] gi|291451888|ref|ZP_06591278.1| 30S ribosomal protein S13 [Streptomyces albus J1074] gi|291354837|gb|EFE81739.1| 30S ribosomal protein S13 [Streptomyces albus J1074] Length = 126 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLEATGVDPNARVRDLSEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|289435874|ref|YP_003465746.1| hypothetical protein lse_2513 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172118|emb|CBH28664.1| rpsM [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313631792|gb|EFR98972.1| 30S ribosomal protein S13 [Listeria seeligeri FSL N1-067] gi|313636144|gb|EFS02007.1| 30S ribosomal protein S13 [Listeria seeligeri FSL S4-171] Length = 121 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 83/111 (74%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRK 110 >gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978] gi|169632372|ref|YP_001706108.1| 30S ribosomal protein S13 [Acinetobacter baumannii SDF] gi|169794616|ref|YP_001712409.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE] gi|184159576|ref|YP_001847915.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU] gi|213158813|ref|YP_002320811.1| ribosomal protein S13 [Acinetobacter baumannii AB0057] gi|215482205|ref|YP_002324387.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii AB307-0294] gi|239503212|ref|ZP_04662522.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB900] gi|260557049|ref|ZP_05829266.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606] gi|262373499|ref|ZP_06066777.1| 30S ribosomal protein S13 [Acinetobacter junii SH205] gi|294839725|ref|ZP_06784408.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013113] gi|294842675|ref|ZP_06787358.1| 30S ribosomal protein S13 [Acinetobacter sp. 6014059] gi|294860403|ref|ZP_06798172.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013150] gi|301345032|ref|ZP_07225773.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB056] gi|301512037|ref|ZP_07237274.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB058] gi|301595206|ref|ZP_07240214.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB059] gi|158706208|sp|A3M962|RS13_ACIBT RecName: Full=30S ribosomal protein S13 gi|226712678|sp|B7GW24|RS13_ACIB3 RecName: Full=30S ribosomal protein S13 gi|226712679|sp|B7IA17|RS13_ACIB5 RecName: Full=30S ribosomal protein S13 gi|226712680|sp|B2HZ86|RS13_ACIBC RecName: Full=30S ribosomal protein S13 gi|226712681|sp|B0VQU0|RS13_ACIBS RecName: Full=30S ribosomal protein S13 gi|226712682|sp|B0V6U4|RS13_ACIBY RecName: Full=30S ribosomal protein S13 gi|126388958|gb|ABO13456.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978] gi|169147543|emb|CAM85404.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE] gi|169151164|emb|CAO99836.1| 30S ribosomal protein S13 [Acinetobacter baumannii] gi|183211170|gb|ACC58568.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU] gi|213057973|gb|ACJ42875.1| ribosomal protein S13 [Acinetobacter baumannii AB0057] gi|213988532|gb|ACJ58831.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii AB307-0294] gi|260409655|gb|EEX02956.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606] gi|262311252|gb|EEY92338.1| 30S ribosomal protein S13 [Acinetobacter junii SH205] gi|322509486|gb|ADX04940.1| 30S ribosomal protein S13 [Acinetobacter baumannii 1656-2] gi|323519507|gb|ADX93888.1| 30S ribosomal protein S13 [Acinetobacter baumannii TCDC-AB0715] gi|325123582|gb|ADY83105.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus PHEA-2] Length = 118 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|167626785|ref|YP_001677285.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667365|ref|ZP_04754943.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875915|ref|ZP_05248625.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189044265|sp|B0U0W8|RS13_FRAP2 RecName: Full=30S ribosomal protein S13 gi|158523429|gb|ABW70827.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596786|gb|ABZ86784.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841936|gb|EET20350.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 118 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E ++ +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQSCKVDPTVKIKDLSEEQIETLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110 >gi|15674311|ref|NP_268484.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS] gi|19745265|ref|NP_606401.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232] gi|21909600|ref|NP_663868.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315] gi|28894978|ref|NP_801328.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1] gi|50913463|ref|YP_059435.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10394] gi|71902733|ref|YP_279536.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS6180] gi|71909882|ref|YP_281432.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS5005] gi|94987699|ref|YP_595800.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS9429] gi|94989580|ref|YP_597680.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10270] gi|94991568|ref|YP_599667.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS2096] gi|94993468|ref|YP_601566.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10750] gi|139472951|ref|YP_001127666.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo] gi|209558651|ref|YP_002285123.1| 30S ribosomal protein S13 [Streptococcus pyogenes NZ131] gi|306828237|ref|ZP_07461497.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782] gi|54039355|sp|P66395|RS13_STRP3 RecName: Full=30S ribosomal protein S13 gi|54039356|sp|P66396|RS13_STRP8 RecName: Full=30S ribosomal protein S13 gi|54042126|sp|P66394|RS13_STRP1 RecName: Full=30S ribosomal protein S13 gi|73917915|sp|Q5XEB1|RS13_STRP6 RecName: Full=30S ribosomal protein S13 gi|91207628|sp|Q48VS5|RS13_STRPM RecName: Full=30S ribosomal protein S13 gi|158706280|sp|Q1JE35|RS13_STRPB RecName: Full=30S ribosomal protein S13 gi|158706281|sp|Q1JNZ3|RS13_STRPC RecName: Full=30S ribosomal protein S13 gi|158706282|sp|Q1JJ37|RS13_STRPD RecName: Full=30S ribosomal protein S13 gi|158706283|sp|Q1J8Y9|RS13_STRPF RecName: Full=30S ribosomal protein S13 gi|158706284|sp|A2RC38|RS13_STRPG RecName: Full=30S ribosomal protein S13 gi|226712793|sp|B5XJ60|RS13_STRPZ RecName: Full=30S ribosomal protein S13 gi|13621392|gb|AAK33206.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS] gi|19747360|gb|AAL96900.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232] gi|21903781|gb|AAM78671.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315] gi|28810223|dbj|BAC63161.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1] gi|50902537|gb|AAT86252.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10394] gi|71801828|gb|AAX71181.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS6180] gi|71852664|gb|AAZ50687.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS5005] gi|94541207|gb|ABF31256.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS9429] gi|94543088|gb|ABF33136.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10270] gi|94545076|gb|ABF35123.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS2096] gi|94546976|gb|ABF37022.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10750] gi|134271197|emb|CAM29410.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo] gi|209539852|gb|ACI60428.1| SSU ribosomal protein S13p (S18e) [Streptococcus pyogenes NZ131] gi|304429548|gb|EFM32597.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782] Length = 121 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|329945755|ref|ZP_08293442.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528203|gb|EGF55181.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str. F0386] Length = 136 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I Sbjct: 13 VARISGVDLPREKRVEVALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVRLRTHI 72 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK Sbjct: 73 DGSYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 123 >gi|124268604|ref|YP_001022608.1| 30S ribosomal protein S13 [Methylibium petroleiphilum PM1] gi|158706441|sp|A2SLD4|RS13_METPP RecName: Full=30S ribosomal protein S13 gi|124261379|gb|ABM96373.1| SSU ribosomal protein S13P [Methylibium petroleiphilum PM1] Length = 121 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++Q IC+ I ++++ L + ++ +IR+ + Sbjct: 1 MARIAGINIPPQKHAEIGLTAIYGIGRTTAQKICDSCGIARDKKIKDLTDGDLEKIREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +NIKRLMDLGCYRG RHRRGLP+RGQRT TNARTRK K A Sbjct: 61 GR-MTIEGDLRRETTINIKRLMDLGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKSAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|326383229|ref|ZP_08204917.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395] gi|326197979|gb|EGD55165.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395] Length = 122 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G +S++I + + R L +++V ++R+ I Sbjct: 1 MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILAATGLSADLRAKDLTDADVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|225387213|ref|ZP_03756977.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme DSM 15981] gi|225046692|gb|EEG56938.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme DSM 15981] Length = 122 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSANRILTEAGVNPDTRVKDLTDDEVKKLATII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 VEGDLRR +A+NIKRL ++GCYRG+RHR+ LPVRGQ+T TNART Sbjct: 61 ADTQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109 >gi|315304919|ref|ZP_07875023.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596] gi|313626710|gb|EFR95739.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596] Length = 121 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|222152289|ref|YP_002561464.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J] gi|254811169|sp|B9DSX4|RS13_STRU0 RecName: Full=30S ribosomal protein S13 gi|222113100|emb|CAR40482.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J] Length = 121 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|31544834|ref|NP_853412.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)] gi|26399325|sp|Q9RDV8|RS13_MYCGA RecName: Full=30S ribosomal protein S13 gi|6601580|gb|AAF19041.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum] gi|31541680|gb|AAP56980.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)] gi|284930908|gb|ADC30847.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(high)] gi|284931664|gb|ADC31602.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. F] Length = 124 Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KRV +L YI+GIG +Q+I K I +RV L + E+ IR ++ Sbjct: 1 MARILGIDIPNNKRVEISLTYIYGIGKPRAQEILRKAKIDFNKRVKDLSDEELALIR-SV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EGDLRR VA+NIKRLM++G Y GLRHRRGLPVRGQRT +NARTRK Sbjct: 60 ASTYVLEGDLRRDVALNIKRLMEVGSYAGLRHRRGLPVRGQRTKSNARTRK 110 >gi|329116762|ref|ZP_08245479.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020] gi|326907167|gb|EGE54081.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020] Length = 121 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y+ GIG +SQ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVFGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|319948698|ref|ZP_08022819.1| 30S ribosomal protein S13 [Dietzia cinnamea P4] gi|319437600|gb|EFV92599.1| 30S ribosomal protein S13 [Dietzia cinnamea P4] Length = 122 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S +I + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILERTGISPDLRTKDLTDEQLTVLRDDI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREIQGDIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|154505144|ref|ZP_02041882.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149] gi|153794623|gb|EDN77043.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149] Length = 159 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 79/109 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L + +V +I + I Sbjct: 38 MARIAGVDLPRDKRVEIGLTYIYGIGKTSAIRILADAGVDPDTRVRDLTQDDVKKISEVI 97 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART Sbjct: 98 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 146 >gi|116493139|ref|YP_804874.1| 30S ribosomal protein S13 [Pediococcus pentosaceus ATCC 25745] gi|122265397|sp|Q03EE0|RS13_PEDPA RecName: Full=30S ribosomal protein S13 gi|116103289|gb|ABJ68432.1| SSU ribosomal protein S13P [Pediococcus pentosaceus ATCC 25745] Length = 121 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILKDAEVSEDIRVRDLTADQEDKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 D-NYLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|88854652|ref|ZP_01129318.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1] gi|88815813|gb|EAR25669.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1] Length = 124 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + I E RVH L + ++I +R I Sbjct: 1 MARLAGVDIPRDKRVEVALTYIYGVGRTRALKTLADTQISGEIRVHDLTDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++QVEGDLRR VA +I+R +++G Y+G+RHR+GLPV GQRT TNARTRK Sbjct: 61 EGNFQVEGDLRREVAADIRRKVEIGSYQGIRHRKGLPVHGQRTKTNARTRK 111 >gi|261364877|ref|ZP_05977760.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996] gi|288566925|gb|EFC88485.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996] Length = 120 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPITKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|90962382|ref|YP_536298.1| 30S ribosomal protein S13 [Lactobacillus salivarius UCC118] gi|227891568|ref|ZP_04009373.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741] gi|301300217|ref|ZP_07206429.1| 30S ribosomal protein S13 [Lactobacillus salivarius ACS-116-V-Col5a] gi|122448614|sp|Q1WSB4|RS13_LACS1 RecName: Full=30S ribosomal protein S13 gi|90821576|gb|ABE00215.1| SSU ribosomal protein S13P [Lactobacillus salivarius UCC118] gi|227866715|gb|EEJ74136.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741] gi|300852158|gb|EFK79830.1| 30S ribosomal protein S13 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 121 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV L YI+GIG ++Q I ++ + + RV L + +IR + Sbjct: 1 MARIAGVDLPRNKRVVIGLTYIYGIGNSTAQKILSEAGVSEDVRVRDLTADQEDKIRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V++NIKRL ++G YRGLRHRR LPVRGQ T NARTRK Sbjct: 61 DK-YKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPVRGQNTKNNARTRK 110 >gi|19704621|ref|NP_604183.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329032|ref|ZP_06871538.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|32363351|sp|Q8RE41|RS13_FUSNN RecName: Full=30S ribosomal protein S13 gi|19714921|gb|AAL95482.1| SSU ribosomal protein S13P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153836|gb|EFG94648.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 118 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEINKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|299768688|ref|YP_003730714.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1] gi|298698776|gb|ADI89341.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1] Length = 118 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|226953893|ref|ZP_03824357.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244] gi|294651612|ref|ZP_06728916.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194] gi|226835376|gb|EEH67759.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244] gi|292822461|gb|EFF81360.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194] Length = 118 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGIAGTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|161485990|ref|NP_737179.2| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] gi|32363329|sp|Q8FS35|RS13_COREF RecName: Full=30S ribosomal protein S13 Length = 122 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + + P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|312866513|ref|ZP_07726730.1| 30S ribosomal protein S13 [Streptococcus downei F0415] gi|311097944|gb|EFQ56171.1| 30S ribosomal protein S13 [Streptococcus downei F0415] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K VV +L YI+GIG +SQ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKHVVISLTYIYGIGLATSQKILAAAGVAEDIRVKDLTTDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 D-NIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|119502945|ref|ZP_01625030.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080] gi|119461291|gb|EAW42381.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080] Length = 118 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP K + +L YI+G+G ++ + + I + +V +L E E+ Q+R + Sbjct: 1 MARLAGVNIPDNKHALVSLTYIYGVGRTQARRLLDATGISYQTKVGELSEGELDQLR-GL 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK Sbjct: 60 LNELTVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRK 110 >gi|320548031|ref|ZP_08042311.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812] gi|320447273|gb|EFW88036.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|227876169|ref|ZP_03994285.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243] gi|269976924|ref|ZP_06183898.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1] gi|306819444|ref|ZP_07453151.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239] gi|307701694|ref|ZP_07638710.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16] gi|227843130|gb|EEJ53323.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243] gi|269934755|gb|EEZ91315.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1] gi|304647736|gb|EFM45054.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239] gi|307613197|gb|EFN92450.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16] Length = 124 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +++ + P+ RV L E E+I++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIYGIGRTRAKETLESTGVSPDTRVKDLTEDELIKLRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNARTRK Sbjct: 61 QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARTRK 111 >gi|226939209|ref|YP_002794280.1| RpsM [Laribacter hongkongensis HLHK9] gi|254811151|sp|C1DAU0|RS13_LARHH RecName: Full=30S ribosomal protein S13 gi|226714133|gb|ACO73271.1| RpsM [Laribacter hongkongensis HLHK9] Length = 120 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + + L I+GIG ++ IC+ I +V L ++E+ ++R I Sbjct: 1 MARIAGVNIPNHQHIWVGLQAIYGIGATRAKVICSAAGIEISTKVKDLTDAEMEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EGDLRR V MNIKRLMDLGCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-FTIEGDLRREVTMNIKRLMDLGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|328958705|ref|YP_004376091.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4] gi|328675029|gb|AEB31075.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG ++Q + + E RV L ++ IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T NARTRK K R Sbjct: 61 DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSIAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|293375414|ref|ZP_06621695.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909] gi|325844404|ref|ZP_08168131.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1] gi|292645967|gb|EFF63996.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909] gi|325489078|gb|EGC91462.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG ++Q I + + RV L E E+ +IR + Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGIGKPTAQQILAAAGVSEDTRVRDLTEDELNRIRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR +++NIKRLM++ +RG+RHRR LPVRGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREISLNIKRLMEIASFRGVRHRRSLPVRGQNTKNNARTRK 110 >gi|288925691|ref|ZP_06419623.1| 30S ribosomal protein S13 [Prevotella buccae D17] gi|315606480|ref|ZP_07881495.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574] gi|288337629|gb|EFC75983.1| 30S ribosomal protein S13 [Prevotella buccae D17] gi|315251886|gb|EFU31860.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574] Length = 126 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|282858351|ref|ZP_06267531.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010] gi|282588799|gb|EFB93924.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010] Length = 126 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|261338255|ref|ZP_05966139.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093] gi|270276909|gb|EFA22763.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093] Length = 125 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNDKRIEIALTYIFGVGRTRAKETLAATGINPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 ESNYKIEGDLRREIDADIRRKIQINCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|218245118|ref|YP_002370489.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8801] gi|257058143|ref|YP_003136031.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8802] gi|226712727|sp|B7K226|RS13_CYAP8 RecName: Full=30S ribosomal protein S13 gi|218165596|gb|ACK64333.1| ribosomal protein S13 [Cyanothece sp. PCC 8801] gi|256588309|gb|ACU99195.1| ribosomal protein S13 [Cyanothece sp. PCC 8802] Length = 127 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 72/101 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y+ GIG SQ+I + + P+ RV L + EV +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYLFGIGLSRSQEILAETGVNPDTRVRDLTDEEVANLRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 [Enterococcus faecalis V583] gi|227520016|ref|ZP_03950065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104] gi|227555877|ref|ZP_03985924.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22] gi|229546940|ref|ZP_04435665.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322] gi|229550529|ref|ZP_04439254.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200] gi|255971733|ref|ZP_05422319.1| ribosomal protein S13 [Enterococcus faecalis T1] gi|255974733|ref|ZP_05425319.1| ribosomal protein S13 [Enterococcus faecalis T2] gi|256618356|ref|ZP_05475202.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200] gi|256762028|ref|ZP_05502608.1| ribosomal protein S13 [Enterococcus faecalis T3] gi|256855187|ref|ZP_05560548.1| ribosomal protein S13 [Enterococcus faecalis T8] gi|256956838|ref|ZP_05561009.1| ribosomal protein S13 [Enterococcus faecalis DS5] gi|256960645|ref|ZP_05564816.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96] gi|256964156|ref|ZP_05568327.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704] gi|257078508|ref|ZP_05572869.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1] gi|257081521|ref|ZP_05575882.1| ribosomal protein S13 [Enterococcus faecalis E1Sol] gi|257084169|ref|ZP_05578530.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1] gi|257087996|ref|ZP_05582357.1| ribosomal protein S13 [Enterococcus faecalis D6] gi|257088673|ref|ZP_05583034.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188] gi|257417599|ref|ZP_05594593.1| ribosomal protein S13 [Enterococcus faecalis AR01/DG] gi|257418675|ref|ZP_05595669.1| 30S ribosomal protein S13 [Enterococcus faecalis T11] gi|257421523|ref|ZP_05598513.1| 30S ribosomal protein S13 [Enterococcus faecalis X98] gi|293382734|ref|ZP_06628659.1| 30S ribosomal protein S13 [Enterococcus faecalis R712] gi|293388083|ref|ZP_06632611.1| 30S ribosomal protein S13 [Enterococcus faecalis S613] gi|294781075|ref|ZP_06746426.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1] gi|300862068|ref|ZP_07108148.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11] gi|307269111|ref|ZP_07550472.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248] gi|307274195|ref|ZP_07555403.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855] gi|307276420|ref|ZP_07557543.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134] gi|307278630|ref|ZP_07559700.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860] gi|307286990|ref|ZP_07567065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109] gi|307291669|ref|ZP_07571544.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411] gi|312901098|ref|ZP_07760386.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470] gi|312904660|ref|ZP_07763815.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635] gi|312908629|ref|ZP_07767571.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512] gi|312909223|ref|ZP_07768080.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516] gi|312952631|ref|ZP_07771495.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102] gi|32363226|sp|P59754|RS13_ENTFA RecName: Full=30S ribosomal protein S13 gi|29342333|gb|AAO80099.1| ribosomal protein S13 [Enterococcus faecalis V583] gi|227072564|gb|EEI10527.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104] gi|227175044|gb|EEI56016.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22] gi|229304248|gb|EEN70244.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200] gi|229307868|gb|EEN73855.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322] gi|255962751|gb|EET95227.1| ribosomal protein S13 [Enterococcus faecalis T1] gi|255967605|gb|EET98227.1| ribosomal protein S13 [Enterococcus faecalis T2] gi|256597883|gb|EEU17059.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200] gi|256683279|gb|EEU22974.1| ribosomal protein S13 [Enterococcus faecalis T3] gi|256709700|gb|EEU24747.1| ribosomal protein S13 [Enterococcus faecalis T8] gi|256947334|gb|EEU63966.1| ribosomal protein S13 [Enterococcus faecalis DS5] gi|256951141|gb|EEU67773.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96] gi|256954652|gb|EEU71284.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704] gi|256986538|gb|EEU73840.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1] gi|256989551|gb|EEU76853.1| ribosomal protein S13 [Enterococcus faecalis E1Sol] gi|256992199|gb|EEU79501.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1] gi|256996026|gb|EEU83328.1| ribosomal protein S13 [Enterococcus faecalis D6] gi|256997485|gb|EEU84005.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188] gi|257159427|gb|EEU89387.1| ribosomal protein S13 [Enterococcus faecalis ARO1/DG] gi|257160503|gb|EEU90463.1| 30S ribosomal protein S13 [Enterococcus faecalis T11] gi|257163347|gb|EEU93307.1| 30S ribosomal protein S13 [Enterococcus faecalis X98] gi|291079894|gb|EFE17258.1| 30S ribosomal protein S13 [Enterococcus faecalis R712] gi|291082534|gb|EFE19497.1| 30S ribosomal protein S13 [Enterococcus faecalis S613] gi|294451878|gb|EFG20329.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1] gi|295112522|emb|CBL31159.1| SSU ribosomal protein S13P [Enterococcus sp. 7L76] gi|300848593|gb|EFK76350.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11] gi|306497288|gb|EFM66830.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411] gi|306501936|gb|EFM71225.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109] gi|306504690|gb|EFM73890.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860] gi|306506900|gb|EFM76047.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134] gi|306509157|gb|EFM78219.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855] gi|306514591|gb|EFM83145.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248] gi|310625416|gb|EFQ08699.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512] gi|310629419|gb|EFQ12702.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102] gi|310632012|gb|EFQ15295.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635] gi|311290465|gb|EFQ69021.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516] gi|311291770|gb|EFQ70326.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470] gi|315026811|gb|EFT38743.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2137] gi|315028852|gb|EFT40784.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4000] gi|315031163|gb|EFT43095.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0017] gi|315035991|gb|EFT47923.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0027] gi|315147147|gb|EFT91163.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4244] gi|315151095|gb|EFT95111.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0012] gi|315153585|gb|EFT97601.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0031] gi|315156235|gb|EFU00252.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0043] gi|315158620|gb|EFU02637.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0312] gi|315160751|gb|EFU04768.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0645] gi|315165878|gb|EFU09895.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1302] gi|315168124|gb|EFU12141.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1341] gi|315171436|gb|EFU15453.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1342] gi|315172670|gb|EFU16687.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1346] gi|315573538|gb|EFU85729.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309B] gi|315579350|gb|EFU91541.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0630] gi|315582114|gb|EFU94305.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309A] gi|323479446|gb|ADX78885.1| 30S ribosomal protein S13 [Enterococcus faecalis 62] gi|327534028|gb|AEA92862.1| 30S ribosomal protein S13 [Enterococcus faecalis OG1RF] gi|329577725|gb|EGG59151.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1467] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ + + + + RV L + IR I Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRK 110 >gi|152964682|ref|YP_001360466.1| 30S ribosomal protein S13 [Kineococcus radiotolerans SRS30216] gi|189044279|sp|A6W5W3|RS13_KINRD RecName: Full=30S ribosomal protein S13 gi|151359199|gb|ABS02202.1| ribosomal protein S13 [Kineococcus radiotolerans SRS30216] Length = 126 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G +++ + P+ RV L + +++ +R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRAKETLAATGVSPDLRVRDLSDDDLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYRVEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|254391368|ref|ZP_05006571.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|294814492|ref|ZP_06773135.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|326442881|ref|ZP_08217615.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|197705058|gb|EDY50870.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|294327091|gb|EFG08734.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] Length = 126 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG +Q+ + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLAQETLAATGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|302543336|ref|ZP_07295678.1| 30S ribosomal protein S13 [Streptomyces hygroscopicus ATCC 53653] gi|302460954|gb|EFL24047.1| 30S ribosomal protein S13 [Streptomyces himastatinicus ATCC 53653] Length = 126 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|322388378|ref|ZP_08061981.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779] gi|322391222|ref|ZP_08064694.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780] gi|321140691|gb|EFX36193.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779] gi|321145975|gb|EFX41364.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780] Length = 121 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +SQ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGVSEDIRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|323344660|ref|ZP_08084884.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269] gi|323093930|gb|EFZ36507.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269] Length = 126 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWNDDQAAKIREIISA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|237742281|ref|ZP_04572762.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13] gi|256845560|ref|ZP_05551018.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2] gi|294785151|ref|ZP_06750439.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27] gi|229429929|gb|EEO40141.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13] gi|256719119|gb|EEU32674.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2] gi|294486865|gb|EFG34227.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27] Length = 118 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + + + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVK 110 >gi|257095018|ref|YP_003168659.1| 30S ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047542|gb|ACV36730.1| ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 120 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + AL I+GIG +Q IC+ + ++ L E+E+ ++R I Sbjct: 1 MARIAGVNLPNHQHAEIALTAIYGIGRPRAQKICDAAGVTRSTKMKDLTEAELERLRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 61 GK-LSVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPSRGQRTRTNARTRK 110 >gi|116495923|ref|YP_807657.1| 30S ribosomal protein S13 [Lactobacillus casei ATCC 334] gi|191639405|ref|YP_001988571.1| 30S ribosomal protein S13 [Lactobacillus casei BL23] gi|227533983|ref|ZP_03964032.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630328|ref|ZP_04673359.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067480|ref|YP_003789503.1| 30S ribosomal protein L13 [Lactobacillus casei str. Zhang] gi|122262677|sp|Q035A7|RS13_LACC3 RecName: Full=30S ribosomal protein S13 gi|226712751|sp|B3WAJ4|RS13_LACCB RecName: Full=30S ribosomal protein S13 gi|116106073|gb|ABJ71215.1| SSU ribosomal protein S13P [Lactobacillus casei ATCC 334] gi|190713707|emb|CAQ67713.1| 30S ribosomal protein S13 [Lactobacillus casei BL23] gi|227188360|gb|EEI68427.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527940|gb|EEQ66941.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439887|gb|ADK19653.1| Ribosomal protein S13 [Lactobacillus casei str. Zhang] gi|327383493|gb|AEA54969.1| hypothetical protein LC2W_2639 [Lactobacillus casei LC2W] gi|327386686|gb|AEA58160.1| hypothetical protein LCBD_2666 [Lactobacillus casei BD-II] Length = 121 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKNAGVPENVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DS-VKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|295135679|ref|YP_003586355.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87] gi|294983694|gb|ADF54159.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87] Length = 124 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q+I + + ++V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAQEILAEAKVDESKKVSDWNDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y +EG+LR V M+IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 -GNYTIEGELRTEVQMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|305665114|ref|YP_003861401.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170] gi|88709866|gb|EAR02098.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170] Length = 124 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG S++I +K + + +V + E+ +IR+A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRSKEILDKAQVSEDTKVSDWNDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 AL-YTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|297159622|gb|ADI09334.1| 30S ribosomal protein S13 [Streptomyces bingchenggensis BCW-1] Length = 126 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPRDKRVEVALTYVFGIGRTLAQQTLATTGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|224510714|pdb|3FIH|M Chain M, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662229|pdb|2WWL|M Chain M, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387998|pdb|3OFP|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320056|pdb|3OFB|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320160|pdb|3OFY|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113645|pdb|3OAR|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 113 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109 >gi|171462902|ref|YP_001797015.1| ribosomal protein S13 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226712774|sp|B1XSS4|RS13_POLNS RecName: Full=30S ribosomal protein S13 gi|171192440|gb|ACB43401.1| ribosomal protein S13 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 121 Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I GIG + IC + +++V L+++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIFGIGTTRAHQICKTTGVAIDKKVKDLIDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V M+IKRLMDLGCYRG+RHR+ LPVRGQRT TNARTRK K GV Sbjct: 61 GK-FVTEGDLRREVTMSIKRLMDLGCYRGVRHRKDLPVRGQRTKTNARTRKGPRKSGVQL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|238916289|ref|YP_002929806.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC 27750] gi|259494676|sp|C4Z2V4|RS13_EUBE2 RecName: Full=30S ribosomal protein S13 gi|238871649|gb|ACR71359.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC 27750] Length = 124 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 2/111 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG + I + + P+ RV L + EV +I + I Sbjct: 1 MARISGVDLPREKRIEIGLTYVYGIGRVRASKILEEAGVNPDTRVKDLTDEEVAKIAKVI 60 Query: 61 EQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + D + VEGDLRR VAMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART Sbjct: 61 DADPEHLVEGDLRREVAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNART 111 >gi|237736195|ref|ZP_04566676.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817] gi|229421748|gb|EEO36795.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817] Length = 118 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR AI Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILTEAGINFDTRVKDLTEEEVNKIR-AI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 60 VETIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|298491420|ref|YP_003721597.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708] gi|298233338|gb|ADI64474.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708] Length = 126 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L YI+GIG SQ+I + P+ RV L ++++ +R I Sbjct: 1 MARISGVDLPRDKRIEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLNDADIAALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 101 >gi|326799152|ref|YP_004316971.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21] gi|326549916|gb|ADZ78301.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21] Length = 125 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR V L YI+GIG +++ I + I + +V + + ++ IR I Sbjct: 1 MARIAGIDLPRNKRGVIGLTYIYGIGPSTAKSILAEAGIDEDTKVQEWTDDQLTAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEG LR V +NIKRLMD+GCYRGLRHR+GLP+RGQRT N+RTRK Sbjct: 61 NDRVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111 >gi|194246757|ref|YP_002004396.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali] gi|254811160|sp|B3R015|RS13_PHYMT RecName: Full=30S ribosomal protein S13 gi|193807114|emb|CAP18552.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali] Length = 127 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/113 (59%), Positives = 78/113 (69%), Gaps = 2/113 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL-AIPPERRVHQLVESEVIQIRQA 59 MARIAGV IP KRVV AL YI GIG K +Q+I + L I +V L E +I IR Sbjct: 1 MARIAGVEIPSNKRVVIALTYIRGIGIKKAQNILSDLKEIDINTKVEDLKEQHLIAIRNK 60 Query: 60 IEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+ +Y VEGDL+R VA+NIKRLM+ G YRGLRHR+GLP RGQ T NART K Sbjct: 61 IQNGNYLVEGDLKREVALNIKRLMENGSYRGLRHRKGLPSRGQNTRNNARTIK 113 >gi|215432431|ref|ZP_03430350.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] gi|289755593|ref|ZP_06514971.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] gi|289696180|gb|EFD63609.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] Length = 124 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E D +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK Sbjct: 61 EADLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111 >gi|294669846|ref|ZP_06734905.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308239|gb|EFE49482.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 120 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I +V L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKLICAATGIEGSTKVKDLDENQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q Y+VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 LQ-YEVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRK 110 >gi|282860836|ref|ZP_06269902.1| ribosomal protein S13 [Streptomyces sp. ACTE] gi|282564572|gb|EFB70108.1| ribosomal protein S13 [Streptomyces sp. ACTE] Length = 126 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILATTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|45644718|gb|AAS73106.1| predicted ribosomal protein S13 [uncultured marine gamma proteobacterium EBAC20E09] Length = 118 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L +I GIG K++Q+IC L I +++ L E E+ IR AI Sbjct: 1 MARIAGVNIPENKHVEISLTHIFGIGRKTAQNICIDLKIDYTKKISDLSEEEIESIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR ++ NIKRL DL YRG+RHRR LP RGQ T NARTRK Sbjct: 61 -GNYVVEGDLRRNISTNIKRLQDLASYRGIRHRRKLPTRGQNTKNNARTRK 110 >gi|317125843|ref|YP_004099955.1| 30S ribosomal protein S13P [Intrasporangium calvum DSM 43043] gi|315589931|gb|ADU49228.1| SSU ribosomal protein S13P [Intrasporangium calvum DSM 43043] Length = 124 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G S++ + P+ RV L ++E++ +R + Sbjct: 1 MARLVGVDLPRDKRVEVALTYIFGVGRTRSKEALAATGVSPDTRVKDLGDAELVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNYRLEGDLRREVQSDIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|326793580|ref|YP_004311400.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1] gi|326544344|gb|ADZ89564.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1] Length = 118 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRSICAATGVAETAKIGSLSDEVLDQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK Sbjct: 61 -ANYTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRK 110 >gi|288803957|ref|ZP_06409380.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18] gi|302345098|ref|YP_003813451.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845] gi|288333590|gb|EFC72042.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18] gi|302149822|gb|ADK96084.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845] Length = 126 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|210631177|ref|ZP_03296788.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279] gi|210160144|gb|EEA91115.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279] Length = 124 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR L YI+GIG ++ +C L I R+ L E ++ IR I Sbjct: 1 MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK Sbjct: 61 DKNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 112 >gi|261378063|ref|ZP_05982636.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685] gi|269145513|gb|EEZ71931.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685] Length = 120 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|33357890|pdb|1P6G|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357967|pdb|1P87|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754051|pdb|2AVY|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754107|pdb|2AW7|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138065|pdb|2I2P|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138136|pdb|2I2U|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836035|pdb|2QOU|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836092|pdb|2QOW|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836139|pdb|2QOY|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836196|pdb|2QP0|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429710|pdb|2QAL|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429762|pdb|2QAN|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429820|pdb|2QB9|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429872|pdb|2QBB|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429924|pdb|2QBD|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429976|pdb|2QBF|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430030|pdb|2QBH|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430083|pdb|2QBJ|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431383|pdb|2Z4K|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431436|pdb|2Z4M|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988800|pdb|2VHO|M Chain M, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988821|pdb|2VHP|M Chain M, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107290|pdb|3DF1|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107342|pdb|3DF3|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|329666004|pdb|3J00|M Chain M, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 117 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109 >gi|332076678|gb|EGI87140.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17545] Length = 129 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|119484811|ref|ZP_01619293.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106] gi|119457629|gb|EAW38753.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106] Length = 127 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L ++EV +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILKETGVNPDTRVKDLSDAEVAALRTLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + YQVEGDLRR AMNIKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QGQYQVEGDLRRWEAMNIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|313206372|ref|YP_004045549.1| SSU ribosomal protein s13p [Riemerella anatipestifer DSM 15868] gi|312445688|gb|ADQ82043.1| SSU ribosomal protein S13P [Riemerella anatipestifer DSM 15868] gi|315023687|gb|EFT36691.1| SSU ribosomal protein S13p (S18e) [Riemerella anatipestifer RA-YM] gi|325336182|gb|ADZ12456.1| Ribosomal protein S13 [Riemerella anatipestifer RA-GD] Length = 125 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI+GIG ++ +I I +++V++ + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIYGIGKSTASEILKNAGISEDKKVNEWNDDELAAIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SENIKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111 >gi|308387977|pdb|3OFO|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320035|pdb|3OFA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320139|pdb|3OFX|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113624|pdb|3OAQ|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome Length = 114 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109 >gi|282878781|ref|ZP_06287549.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310] gi|317503957|ref|ZP_07961965.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606] gi|281299172|gb|EFA91573.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310] gi|315664983|gb|EFV04642.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606] Length = 126 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|297564063|ref|YP_003683036.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848512|gb|ADH70530.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 126 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/110 (53%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI GIG + + + RV++L E +++++R+ I Sbjct: 1 MARIEGVDLPRDKRVEIALTYIFGIGRTRALETLKSTGVDGNTRVYELTEEDLVKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 +YQVEGDLRR V +I+R M++G Y+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 GSNYQVEGDLRREVQGDIRRKMEIGSYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 [Streptococcus suis 05ZYH33] gi|146319944|ref|YP_001199655.1| 30S ribosomal protein S13 [Streptococcus suis 98HAH33] gi|223933082|ref|ZP_03625075.1| ribosomal protein S13 [Streptococcus suis 89/1591] gi|253751013|ref|YP_003024154.1| 30S ribosomal protein S13 [Streptococcus suis SC84] gi|253752913|ref|YP_003026053.1| 30S ribosomal protein S13 [Streptococcus suis P1/7] gi|253754738|ref|YP_003027878.1| 30S ribosomal protein S13 [Streptococcus suis BM407] gi|330831944|ref|YP_004400769.1| 30S ribosomal protein S13 [Streptococcus suis ST3] gi|158706285|sp|A4VYR6|RS13_STRS2 RecName: Full=30S ribosomal protein S13 gi|158706287|sp|A4VSH6|RS13_STRSY RecName: Full=30S ribosomal protein S13 gi|145688559|gb|ABP89065.1| Ribosomal protein S13 [Streptococcus suis 05ZYH33] gi|145690750|gb|ABP91255.1| Ribosomal protein S13 [Streptococcus suis 98HAH33] gi|223898269|gb|EEF64637.1| ribosomal protein S13 [Streptococcus suis 89/1591] gi|251815302|emb|CAZ50870.1| 30S ribosomal protein S13 [Streptococcus suis SC84] gi|251817202|emb|CAZ54925.1| 30S ribosomal protein S13 [Streptococcus suis BM407] gi|251819158|emb|CAR44290.1| 30S ribosomal protein S13 [Streptococcus suis P1/7] gi|292557555|gb|ADE30556.1| ribosomal protein S13 [Streptococcus suis GZ1] gi|319757264|gb|ADV69206.1| 30S ribosomal protein S13 [Streptococcus suis JS14] gi|329306167|gb|AEB80583.1| 30S ribosomal protein S13 [Streptococcus suis ST3] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|54022801|ref|YP_117043.1| 30S ribosomal protein S13 [Nocardia farcinica IFM 10152] gi|81375955|sp|Q5Z1L2|RS13_NOCFA RecName: Full=30S ribosomal protein S13 gi|54014309|dbj|BAD55679.1| putative ribosomal protein S13 [Nocardia farcinica IFM 10152] Length = 123 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/112 (52%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S++I + P+ R L + ++ ++R I Sbjct: 1 MARLMGVDLPREKRMEIALTYIYGIGRTRSKEILEATGVSPDLRSKDLSDDDLTKLRDYI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EASEFKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 112 >gi|282880977|ref|ZP_06289668.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1] gi|281305200|gb|EFA97269.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRDLKVSEWTDDQAASIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|299138170|ref|ZP_07031350.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8] gi|298600100|gb|EFI56258.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+ AL YI+GIG + I I P ++ L E ++ IRQ I Sbjct: 1 MARIAGVDLPGNKQARIALTYIYGIGDPRALRILTAAGIDPLAKMGTLDEDQLNAIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EKEGGIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|186477564|ref|YP_001859034.1| 30S ribosomal protein S13 [Burkholderia phymatum STM815] gi|209521363|ref|ZP_03270076.1| ribosomal protein S13 [Burkholderia sp. H160] gi|295677909|ref|YP_003606433.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002] gi|226712708|sp|B2JI42|RS13_BURP8 RecName: Full=30S ribosomal protein S13 gi|184194023|gb|ACC71988.1| ribosomal protein S13 [Burkholderia phymatum STM815] gi|209498183|gb|EDZ98325.1| ribosomal protein S13 [Burkholderia sp. H160] gi|295437752|gb|ADG16922.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+GIG S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|146298138|ref|YP_001192729.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101] gi|189040502|sp|A5FN18|RS13_FLAJO RecName: Full=30S ribosomal protein S13 gi|146152556|gb|ABQ03410.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101] Length = 124 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + +I K + +++V + E+ IR A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGLGKSRAIEILEKAQVSQDKKVQDWNDDEIGAIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SF-YKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|307565118|ref|ZP_07627626.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A] gi|307346149|gb|EFN91478.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDEQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|54778766|gb|AAV39600.1| ribosomal protein S13 [synthetic construct] Length = 145 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 26 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 85 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 86 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 134 >gi|284040597|ref|YP_003390527.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74] gi|283819890|gb|ADB41728.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74] Length = 125 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR AL YI GIG ++ I I +++ + + E +R AI Sbjct: 1 MARIAGVDIPDKKRGEIALTYIFGIGRSRAKKILTDAGISVDKKASEWSDEEASAVRNAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG LR V ++IKRLMD+GCYRGLRHR+GLPVRGQ T N+RTRK Sbjct: 61 SNEYKVEGQLRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQHTKNNSRTRK 111 >gi|259502554|ref|ZP_05745456.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041] gi|259169506|gb|EEW54001.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVVGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|251781542|ref|YP_002995843.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390170|dbj|BAH80629.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322410882|gb|EFY01790.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323126335|gb|ADX23632.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|120609323|ref|YP_969001.1| 30S ribosomal protein S13 [Acidovorax citrulli AAC00-1] gi|326315412|ref|YP_004233084.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC 19860] gi|158706206|sp|A1TJT9|RS13_ACIAC RecName: Full=30S ribosomal protein S13 gi|120587787|gb|ABM31227.1| SSU ribosomal protein S13P [Acidovorax citrulli AAC00-1] gi|323372248|gb|ADX44517.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEACGIAYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163790170|ref|ZP_02184604.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7] gi|159874661|gb|EDP68731.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV+ +L YI+GIG ++Q + + E RV L ++ IR I Sbjct: 1 MARIAGVDIPRDKRVIISLTYIYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSITGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116667422|pdb|2GY9|M Chain M, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667474|pdb|2GYB|M Chain M, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 Length = 115 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109 >gi|298207750|ref|YP_003715929.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559] gi|83850388|gb|EAP88256.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559] Length = 124 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q++ + +++V + E+ +IRQ + Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEVLKNANVSEDKKVSDWNDEEISRIRQQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + +EG+LR V+++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GQ-FTIEGELRTEVSLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|227543599|ref|ZP_03973648.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A] gi|300909372|ref|ZP_07126833.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112] gi|154705526|gb|ABS84189.1| ribosomal protein S13p [Lactobacillus reuteri] gi|227186439|gb|EEI66510.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A] gi|300893237|gb|EFK86596.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVVGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|300775036|ref|ZP_07084899.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910] gi|300506851|gb|EFK37986.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910] Length = 125 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI+G+G +S +I I +++V++ + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIYGVGRSTSSEILKAAGISEDKKVNEWNDDELAAIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SENVKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111 >gi|75906936|ref|YP_321232.1| 30S ribosomal protein S13 [Anabaena variabilis ATCC 29413] gi|91207688|sp|Q3MF99|RS13_ANAVT RecName: Full=30S ribosomal protein S13 gi|75700661|gb|ABA20337.1| SSU ribosomal protein S13P [Anabaena variabilis ATCC 29413] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ+I + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLSDADVAALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQ 101 >gi|302558969|ref|ZP_07311311.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000] gi|302476587|gb|EFL39680.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ I P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGIDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|166367997|ref|YP_001660270.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843] gi|189044281|sp|B0JY40|RS13_MICAN RecName: Full=30S ribosomal protein S13 gi|159027083|emb|CAO89268.1| rpsM [Microcystis aeruginosa PCC 7806] gi|166090370|dbj|BAG05078.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843] Length = 127 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++G+G SQ++ + + P+ RV L + +V +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR AMNIKRL D+G YRG RHR GLPVRGQ Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQ 101 >gi|331702056|ref|YP_004399015.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929] gi|329129399|gb|AEB73952.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929] Length = 120 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG ++Q + K + + RV L + +IR+ + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIFGIGNTTAQKVLAKAGVSEDVRVRDLTPDQEDKIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 -GDLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|320009077|gb|ADW03927.1| 30S ribosomal protein S13 [Streptomyces flavogriseus ATCC 33331] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAAAGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|237744172|ref|ZP_04574653.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1] gi|256027713|ref|ZP_05441547.1| 30S ribosomal protein S13 [Fusobacterium sp. D11] gi|260494242|ref|ZP_05814373.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33] gi|289765672|ref|ZP_06525050.1| SSU ribosomal protein S13P [Fusobacterium sp. D11] gi|229431401|gb|EEO41613.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1] gi|260198388|gb|EEW95904.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33] gi|289717227|gb|EFD81239.1| SSU ribosomal protein S13P [Fusobacterium sp. D11] Length = 118 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + + + RV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVK 110 >gi|56751895|ref|YP_172596.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|81301020|ref|YP_401228.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 7942] gi|3122786|sp|O24708|RS13_SYNP6 RecName: Full=30S ribosomal protein S13 gi|123556372|sp|Q31L28|RS13_SYNE7 RecName: Full=30S ribosomal protein S13 gi|2446911|dbj|BAA22470.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|56686854|dbj|BAD80076.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|81169901|gb|ABB58241.1| SSU ribosomal protein S13P [Synechococcus elongatus PCC 7942] Length = 125 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +++I K + P+ R+ L +SEV +RQ + Sbjct: 1 MARIAGVDLPRDKRAEIGLTYIYGIGPTRAKEILAKTGVSPDTRIKDLNDSEVAALRQVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E DYQVEGDLRR AM+IKRLMD+G RG RHR GLPVRGQ Sbjct: 61 ENDYQVEGDLRRLEAMSIKRLMDIGTVRGRRHRAGLPVRGQ 101 >gi|288801122|ref|ZP_06406578.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str. F0039] gi|288332056|gb|EFC70538.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str. F0039] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRK 112 >gi|21223106|ref|NP_628885.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)] gi|256785798|ref|ZP_05524229.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] gi|289769690|ref|ZP_06529068.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] gi|6226063|sp|O86773|RS13_STRCO RecName: Full=30S ribosomal protein S13 gi|3449239|emb|CAA20383.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)] gi|289699889|gb|EFD67318.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] Length = 126 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|23492405|dbj|BAC17379.1| putative 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] Length = 142 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + + P+ R L + ++ +R I Sbjct: 21 MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 80 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 81 EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 131 >gi|15900170|ref|NP_344774.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TIGR4] gi|15902257|ref|NP_357807.1| 30S ribosomal protein S13 [Streptococcus pneumoniae R6] gi|111658778|ref|ZP_01409409.1| hypothetical protein SpneT_02000075 [Streptococcus pneumoniae TIGR4] gi|116516047|ref|YP_815735.1| 30S ribosomal protein S13 [Streptococcus pneumoniae D39] gi|148983633|ref|ZP_01816952.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71] gi|148987971|ref|ZP_01819434.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73] gi|148992811|ref|ZP_01822454.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68] gi|148996656|ref|ZP_01824374.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70] gi|149005985|ref|ZP_01829714.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74] gi|149011104|ref|ZP_01832409.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75] gi|149017924|ref|ZP_01834383.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72] gi|168483871|ref|ZP_02708823.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00] gi|168485999|ref|ZP_02710507.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00] gi|168489711|ref|ZP_02713910.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195] gi|168492188|ref|ZP_02716331.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04] gi|168493928|ref|ZP_02718071.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06] gi|168576339|ref|ZP_02722222.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016] gi|169833118|ref|YP_001693765.1| 30S ribosomal protein S13 [Streptococcus pneumoniae Hungary19A-6] gi|182683211|ref|YP_001834958.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14] gi|221231136|ref|YP_002510288.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669] gi|225853839|ref|YP_002735351.1| 30S ribosomal protein S13 [Streptococcus pneumoniae JJA] gi|225855998|ref|YP_002737509.1| 30S ribosomal protein S13 [Streptococcus pneumoniae P1031] gi|225858087|ref|YP_002739597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae 70585] gi|237649699|ref|ZP_04523951.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974] gi|237821397|ref|ZP_04597242.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974M2] gi|270292024|ref|ZP_06198239.1| ribosomal protein S13 [Streptococcus sp. M143] gi|289168708|ref|YP_003446977.1| 30S ribosomal protein S13 [Streptococcus mitis B6] gi|293364324|ref|ZP_06611050.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|298230390|ref|ZP_06964071.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298256011|ref|ZP_06979597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502047|ref|YP_003723987.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A] gi|303255071|ref|ZP_07341147.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455] gi|303259285|ref|ZP_07345263.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293] gi|303261040|ref|ZP_07346989.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292] gi|303263368|ref|ZP_07349291.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397] gi|303265533|ref|ZP_07351433.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457] gi|303267909|ref|ZP_07353711.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458] gi|306825963|ref|ZP_07459299.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828806|ref|ZP_07461998.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249] gi|307066911|ref|YP_003875877.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200] gi|307126452|ref|YP_003878483.1| 30S ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B] gi|307702709|ref|ZP_07639661.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|307704088|ref|ZP_07641017.1| 30S ribosomal protein S13 [Streptococcus mitis SK597] gi|307708083|ref|ZP_07644551.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261] gi|307709934|ref|ZP_07646381.1| 30S ribosomal protein S13 [Streptococcus mitis SK564] gi|307711032|ref|ZP_07647454.1| 30S ribosomal protein S13 [Streptococcus mitis SK321] gi|315612355|ref|ZP_07887268.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296] gi|322375016|ref|ZP_08049530.1| 30S ribosomal protein S13 [Streptococcus sp. C300] gi|322377207|ref|ZP_08051699.1| 30S ribosomal protein S13 [Streptococcus sp. M334] gi|331267111|ref|YP_004326741.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5] gi|54039354|sp|P66393|RS13_STRR6 RecName: Full=30S ribosomal protein S13 gi|54042125|sp|P66392|RS13_STRPN RecName: Full=30S ribosomal protein S13 gi|122279379|sp|Q04ML3|RS13_STRP2 RecName: Full=30S ribosomal protein S13 gi|226712791|sp|B1I8M2|RS13_STRPI RecName: Full=30S ribosomal protein S13 gi|226712792|sp|B2IS65|RS13_STRPS RecName: Full=30S ribosomal protein S13 gi|254811167|sp|C1CAN6|RS13_STRP7 RecName: Full=30S ribosomal protein S13 gi|254811168|sp|B8ZKQ3|RS13_STRPJ RecName: Full=30S ribosomal protein S13 gi|254811170|sp|C1CC30|RS13_STRZJ RecName: Full=30S ribosomal protein S13 gi|254811171|sp|C1CIC1|RS13_STRZP RecName: Full=30S ribosomal protein S13 gi|14971703|gb|AAK74414.1| ribosomal protein S13 [Streptococcus pneumoniae TIGR4] gi|15457758|gb|AAK99017.1| 30S Ribosomal protein S13 [Streptococcus pneumoniae R6] gi|116076623|gb|ABJ54343.1| ribosomal protein S13 [Streptococcus pneumoniae D39] gi|147757231|gb|EDK64270.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70] gi|147762341|gb|EDK69302.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74] gi|147764740|gb|EDK71670.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75] gi|147923780|gb|EDK74892.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71] gi|147926435|gb|EDK77508.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73] gi|147928537|gb|EDK79552.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68] gi|147931488|gb|EDK82466.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72] gi|168995620|gb|ACA36232.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae Hungary19A-6] gi|172042881|gb|EDT50927.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00] gi|182628545|gb|ACB89493.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14] gi|183570892|gb|EDT91420.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00] gi|183571844|gb|EDT92372.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195] gi|183573602|gb|EDT94130.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04] gi|183576250|gb|EDT96778.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06] gi|183577820|gb|EDT98348.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016] gi|220673596|emb|CAR68082.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669] gi|225720993|gb|ACO16847.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 70585] gi|225723327|gb|ACO19180.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae JJA] gi|225725374|gb|ACO21226.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae P1031] gi|270279552|gb|EFA25394.1| ribosomal protein S13 [Streptococcus sp. M143] gi|288908275|emb|CBJ23117.1| 30S ribosomal protein S13 [Streptococcus mitis B6] gi|291317170|gb|EFE57597.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|298237642|gb|ADI68773.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A] gi|301793505|emb|CBW35878.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV104] gi|301799381|emb|CBW31916.1| 30S ribosomal protein S13 [Streptococcus pneumoniae OXC141] gi|301801176|emb|CBW33849.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV200] gi|302597901|gb|EFL64971.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455] gi|302637877|gb|EFL68363.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292] gi|302639703|gb|EFL70160.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293] gi|302642605|gb|EFL72950.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458] gi|302644973|gb|EFL75220.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457] gi|302647141|gb|EFL77365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397] gi|304428984|gb|EFM32072.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249] gi|304431679|gb|EFM34659.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408448|gb|ADM83875.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200] gi|306483514|gb|ADM90383.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B] gi|307615868|gb|EFN95073.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261] gi|307616994|gb|EFN96172.1| 30S ribosomal protein S13 [Streptococcus mitis SK321] gi|307619305|gb|EFN98434.1| 30S ribosomal protein S13 [Streptococcus mitis SK564] gi|307622378|gb|EFO01386.1| 30S ribosomal protein S13 [Streptococcus mitis SK597] gi|307623825|gb|EFO02810.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|315315336|gb|EFU63375.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296] gi|321280516|gb|EFX57555.1| 30S ribosomal protein S13 [Streptococcus sp. C300] gi|321281920|gb|EFX58928.1| 30S ribosomal protein S13 [Streptococcus sp. M334] gi|326683783|emb|CBZ01401.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5] gi|327390651|gb|EGE88991.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA04375] gi|332075898|gb|EGI86365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17570] gi|332077534|gb|EGI87995.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA41301] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|148544672|ref|YP_001272042.1| 30S ribosomal protein S13 [Lactobacillus reuteri DSM 20016] gi|184154025|ref|YP_001842366.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112] gi|227363795|ref|ZP_03847902.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3] gi|325683006|ref|ZP_08162522.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A] gi|166991600|sp|A5VLI1|RS13_LACRD RecName: Full=30S ribosomal protein S13 gi|226712753|sp|B2G8V4|RS13_LACRJ RecName: Full=30S ribosomal protein S13 gi|148531706|gb|ABQ83705.1| SSU ribosomal protein S13P [Lactobacillus reuteri DSM 20016] gi|183225369|dbj|BAG25886.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112] gi|227071152|gb|EEI09468.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3] gi|324977356|gb|EGC14307.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A] Length = 121 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|312870485|ref|ZP_07730604.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3] gi|311093947|gb|EFQ52272.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3] Length = 121 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|300867113|ref|ZP_07111779.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506] gi|300334868|emb|CBN56945.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506] Length = 127 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S +I + + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSHEILSATGVNPDTRVKDLSDADVTALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR +MNIKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 ETNYQVEGDLRRLESMNIKRLMDIGTYRGRRHRLGLPVRGQ 101 >gi|17231685|ref|NP_488233.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120] gi|32363371|sp|Q8YPK1|RS13_ANASP RecName: Full=30S ribosomal protein S13 gi|17133328|dbj|BAB75892.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120] Length = 126 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ+I + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEIIAATGVNPDTRVKDLSDADVAALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQ 101 >gi|121603257|ref|YP_980586.1| 30S ribosomal protein S13 [Polaromonas naphthalenivorans CJ2] gi|158706258|sp|A1VJ37|RS13_POLNA RecName: Full=30S ribosomal protein S13 gi|120592226|gb|ABM35665.1| SSU ribosomal protein S13P [Polaromonas naphthalenivorans CJ2] Length = 121 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L +S++ +IR I Sbjct: 1 MARIAGINIPPQKHAEIGLTAIFGIGRTRARKICEACEIDYAKKIKDLTDSDLEKIRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|322386330|ref|ZP_08059960.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100] gi|321269554|gb|EFX52484.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100] Length = 121 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|260592741|ref|ZP_05858199.1| 30S ribosomal protein S13 [Prevotella veroralis F0319] gi|260535272|gb|EEX17889.1| 30S ribosomal protein S13 [Prevotella veroralis F0319] Length = 146 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 24 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 83 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 84 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 132 >gi|84515658|ref|ZP_01003019.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53] gi|84510100|gb|EAQ06556.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53] Length = 104 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/104 (57%), Positives = 73/104 (70%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 + YI GIG ++ IC I RRV+ L ++E++ IR+ I+ + VEGDLRR MNI Sbjct: 1 MTYITGIGPAIAEQICEATNIDRARRVNDLSDAEILTIREFIDANLTVEGDLRRETQMNI 60 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K+ Sbjct: 61 KRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKKK 104 >gi|323527579|ref|YP_004229732.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001] gi|323384581|gb|ADX56672.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+G+G S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|150025384|ref|YP_001296210.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86] gi|158706230|sp|A6GZ76|RS13_FLAPJ RecName: Full=30S ribosomal protein S13 gi|149771925|emb|CAL43399.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86] Length = 124 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + ++ K + +++V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGVGRSRAIEVLEKAQVSQDKKVQDWNDDEIGGIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SF-YKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|194466929|ref|ZP_03072916.1| ribosomal protein S13 [Lactobacillus reuteri 100-23] gi|194453965|gb|EDX42862.1| ribosomal protein S13 [Lactobacillus reuteri 100-23] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|189501187|ref|YP_001960657.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides BS1] gi|226712713|sp|B3EP37|RS13_CHLPB RecName: Full=30S ribosomal protein S13 gi|189496628|gb|ACE05176.1| ribosomal protein S13 [Chlorobium phaeobacteroides BS1] Length = 125 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +I+GIG S+++I ++ I P R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHIYGIGKTSAKNILERVGIDPARKISELNDEEAHSIREVIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DY VEG R +++KRLMD+GCYRGLRHRR LP RGQ T TNARTRK Sbjct: 62 DYIVEGQARGEQQLSVKRLMDIGCYRGLRHRRSLPARGQNTQTNARTRK 110 >gi|264680563|ref|YP_003280473.1| ribosomal protein S13 [Comamonas testosteroni CNB-2] gi|299532873|ref|ZP_07046260.1| 30S ribosomal protein S13 [Comamonas testosteroni S44] gi|262211079|gb|ACY35177.1| ribosomal protein S13 [Comamonas testosteroni CNB-2] gi|298719097|gb|EFI60067.1| 30S ribosomal protein S13 [Comamonas testosteroni S44] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG +++ IC I ++V L ++++ +IR + Sbjct: 1 MARIAGINIPPHKHAEIGLTAIYGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 NP-MTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|308190156|ref|YP_003923087.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER] gi|319777460|ref|YP_004137111.1| 30S ribosomal protein s13 [Mycoplasma fermentans M64] gi|238810273|dbj|BAH70063.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624898|gb|ADN69203.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER] gi|318038535|gb|ADV34734.1| 30S ribosomal protein S13 [Mycoplasma fermentans M64] Length = 123 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG +Q+IC K I RV L E ++ IR+ + Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGRTRAQEICAKAKIDENLRVKDLSEEQLSAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y EGDLRR ++NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK Sbjct: 60 AKEYTTEGDLRRETSLNIKRLMEIKCYRGIRHRKGLPVRGQCTQKNARTRK 110 >gi|115350345|ref|YP_772184.1| 30S ribosomal protein S13 [Burkholderia ambifaria AMMD] gi|134294466|ref|YP_001118201.1| 30S ribosomal protein S13 [Burkholderia vietnamiensis G4] gi|170700717|ref|ZP_02891712.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10] gi|171318371|ref|ZP_02907529.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5] gi|172059364|ref|YP_001807016.1| 30S ribosomal protein S13 [Burkholderia ambifaria MC40-6] gi|122324243|sp|Q0BJ23|RS13_BURCM RecName: Full=30S ribosomal protein S13 gi|166231903|sp|A4JAR3|RS13_BURVG RecName: Full=30S ribosomal protein S13 gi|226712704|sp|B1YRQ2|RS13_BURA4 RecName: Full=30S ribosomal protein S13 gi|115280333|gb|ABI85850.1| SSU ribosomal protein S13P [Burkholderia ambifaria AMMD] gi|134137623|gb|ABO53366.1| SSU ribosomal protein S13P [Burkholderia vietnamiensis G4] gi|170134387|gb|EDT02720.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10] gi|171096449|gb|EDT41348.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5] gi|171991881|gb|ACB62800.1| ribosomal protein S13 [Burkholderia ambifaria MC40-6] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG S+ IC+ + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICSAAGVEFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|195977232|ref|YP_002122476.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867689|ref|YP_002743637.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus] gi|225869560|ref|YP_002745507.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047] gi|226712787|sp|B4U524|RS13_STREM RecName: Full=30S ribosomal protein S13 gi|254811166|sp|C0M7C5|RS13_STRE4 RecName: Full=30S ribosomal protein S13 gi|259494691|sp|C0ME29|RS13_STRS7 RecName: Full=30S ribosomal protein S13 gi|195973937|gb|ACG61463.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225698964|emb|CAW92011.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047] gi|225700965|emb|CAW97686.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|307154820|ref|YP_003890204.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822] gi|306985048|gb|ADN16929.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822] Length = 127 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG SQ+I + + P+ RV L + + +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSQEILAETGVNPDTRVKDLSDEDTAALRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR +MNIKRL+D+G YRG RHR+GLPVRGQ Sbjct: 61 ETNYQIEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQ 101 >gi|288904297|ref|YP_003429518.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34] gi|306830326|ref|ZP_07463497.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306832571|ref|ZP_07465711.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338] gi|325977276|ref|YP_004286992.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731022|emb|CBI12566.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34] gi|304425329|gb|EFM28455.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338] gi|304427573|gb|EFM30674.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177204|emb|CBZ47248.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|281423815|ref|ZP_06254728.1| 30S ribosomal protein S13 [Prevotella oris F0302] gi|299141171|ref|ZP_07034308.1| 30S ribosomal protein S13 [Prevotella oris C735] gi|281402042|gb|EFB32873.1| 30S ribosomal protein S13 [Prevotella oris F0302] gi|298577131|gb|EFI49000.1| 30S ribosomal protein S13 [Prevotella oris C735] Length = 126 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|110598110|ref|ZP_01386388.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031] gi|110340242|gb|EAT58739.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031] Length = 125 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I P+R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRVSAENILQRAGIAPDRKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 SYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTSTNARTRK 110 >gi|329938207|ref|ZP_08287658.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045] gi|329302696|gb|EGG46586.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045] Length = 126 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|307328055|ref|ZP_07607236.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113] gi|306886360|gb|EFN17365.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113] Length = 126 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLGEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|145219085|ref|YP_001129794.1| 30S ribosomal protein S13 [Prosthecochloris vibrioformis DSM 265] gi|189044287|sp|A4SCT3|RS13_PROVI RecName: Full=30S ribosomal protein S13 gi|145205249|gb|ABP36292.1| SSU ribosomal protein S13P [Chlorobium phaeovibrioides DSM 265] Length = 125 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG +++ I + I P+R++ L ++E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTTAKTILQRTGIAPDRKISDLNDAEAHSIRELIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG R ++IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK Sbjct: 62 EYKVEGQARGEQQLSIKRLMDVGCYRGLRHRRSLPVRGQNTQTNARTRK 110 >gi|322374069|ref|ZP_08048603.1| 30S ribosomal protein S13 [Streptococcus sp. C150] gi|321277035|gb|EFX54106.1| 30S ribosomal protein S13 [Streptococcus sp. C150] Length = 121 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLTTSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|126658011|ref|ZP_01729163.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110] gi|126620649|gb|EAZ91366.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110] Length = 127 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SQ+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILEETGVNPDTRVRDLSDEDVAKLRACI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|304384299|ref|ZP_07366710.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973] gi|304334615|gb|EFM00897.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973] Length = 126 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + + +IR I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIRGIISA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRTEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311] gi|55823797|ref|YP_142238.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066] gi|116628574|ref|YP_821193.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMD-9] gi|228478087|ref|ZP_04062698.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126] gi|312862416|ref|ZP_07722659.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396] gi|322515891|ref|ZP_08068833.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124] gi|81558873|sp|Q5LXT5|RS13_STRT1 RecName: Full=30S ribosomal protein S13 gi|81560060|sp|Q5M2D7|RS13_STRT2 RecName: Full=30S ribosomal protein S13 gi|122266832|sp|Q03IH5|RS13_STRTD RecName: Full=30S ribosomal protein S13 gi|55737866|gb|AAV61508.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311] gi|55739782|gb|AAV63423.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066] gi|116101851|gb|ABJ66997.1| SSU ribosomal protein S13P [Streptococcus thermophilus LMD-9] gi|228250267|gb|EEK09520.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126] gi|311102059|gb|EFQ60259.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396] gi|312279235|gb|ADQ63892.1| 30S ribosomal protein S13 [Streptococcus thermophilus ND03] gi|322125678|gb|EFX97005.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124] Length = 121 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|239929489|ref|ZP_04686442.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] gi|291437814|ref|ZP_06577204.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] gi|291340709|gb|EFE67665.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|329956726|ref|ZP_08297299.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056] gi|328524098|gb|EGF51174.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056] Length = 126 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8] gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1] gi|170289158|ref|YP_001739396.1| ribosomal protein S13 [Thermotoga sp. RQ2] gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10] gi|6831659|sp|Q9X1I5|RS13_THEMA RecName: Full=30S ribosomal protein S13 gi|166231929|sp|A5IMA8|RS13_THEP1 RecName: Full=30S ribosomal protein S13 gi|226712798|sp|B1LBL5|RS13_THESQ RecName: Full=30S ribosomal protein S13 gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8] gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1] gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2] gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10] Length = 125 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+V AL YI+GIG S +I I PE+RV L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++VEG+LR V NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK Sbjct: 61 QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRK 111 >gi|22536267|ref|NP_687118.1| 30S ribosomal protein S13 [Streptococcus agalactiae 2603V/R] gi|25010157|ref|NP_734552.1| 30S ribosomal protein S13 [Streptococcus agalactiae NEM316] gi|76788115|ref|YP_328807.1| 30S ribosomal protein S13 [Streptococcus agalactiae A909] gi|76798217|ref|ZP_00780467.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21] gi|77406112|ref|ZP_00783186.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B] gi|77412629|ref|ZP_00788908.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111] gi|54039353|sp|P66391|RS13_STRA5 RecName: Full=30S ribosomal protein S13 gi|54042124|sp|P66390|RS13_STRA3 RecName: Full=30S ribosomal protein S13 gi|91207627|sp|Q3K3U6|RS13_STRA1 RecName: Full=30S ribosomal protein S13 gi|22533088|gb|AAM98990.1|AE014195_9 ribosomal protein S13 [Streptococcus agalactiae 2603V/R] gi|23094508|emb|CAD45727.1| ribosomal protein S13 [Streptococcus agalactiae NEM316] gi|76563172|gb|ABA45756.1| ribosomal protein S13 [Streptococcus agalactiae A909] gi|76586426|gb|EAO62934.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21] gi|77161321|gb|EAO72353.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111] gi|77175293|gb|EAO78088.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B] gi|319743971|gb|EFV96351.1| 30S ribosomal protein S13 [Streptococcus agalactiae ATCC 13813] Length = 121 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|50955542|ref|YP_062830.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07] gi|81390583|sp|Q6AD19|RS13_LEIXX RecName: Full=30S ribosomal protein S13 gi|50952024|gb|AAT89725.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 124 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + I E RV L + +++ +R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGRTRALQTLRETEISGEIRVKDLTDEQLVSLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR VA +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK Sbjct: 61 EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRK 111 >gi|209527120|ref|ZP_03275634.1| ribosomal protein S13 [Arthrospira maxima CS-328] gi|209492460|gb|EDZ92801.1| ribosomal protein S13 [Arthrospira maxima CS-328] Length = 127 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLTDADVAALRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +YQVEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|260061920|ref|YP_003195000.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501] gi|88786053|gb|EAR17222.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501] Length = 124 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +++I K + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAKEILEKAKVDEDTKVSDWSDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GE-FTIEGELRSETQINIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|254412272|ref|ZP_05026047.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420] gi|196181238|gb|EDX76227.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420] Length = 127 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA V++PR KR+ L YI+GIG S++I K + P+ RV L +++V +R + Sbjct: 1 MARIASVDLPRDKRIEIGLTYIYGIGLSRSKEILAKTGVNPDIRVKDLSDADVATLRSVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E DYQVEGDLRR AMNIKRL+D+G YRG RHR+GLPVRGQ Sbjct: 61 EGDYQVEGDLRRWEAMNIKRLVDIGTYRGRRHRQGLPVRGQ 101 >gi|71905984|ref|YP_283571.1| 30S ribosomal protein S13 [Dechloromonas aromatica RCB] gi|91207698|sp|Q47J80|RS13_DECAR RecName: Full=30S ribosomal protein S13 gi|71845605|gb|AAZ45101.1| SSU ribosomal protein S13P [Dechloromonas aromatica RCB] Length = 120 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I GIG +Q IC+ + ++ L +S++ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIFGIGRTRAQKICDAAGVGRNVKMKDLSDSDMDRLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRK 110 >gi|148244351|ref|YP_001219045.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA] gi|158706294|sp|A5CXI6|RS13_VESOH RecName: Full=30S ribosomal protein S13 gi|146326178|dbj|BAF61321.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA] Length = 117 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG +++IC L + P +V + E+++ IR I Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAREICITLKLDPVTKVANITENQLELIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +AM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRRQLAMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRK 110 >gi|87122793|ref|ZP_01078666.1| 30S ribosomal protein S13 [Marinomonas sp. MED121] gi|86161958|gb|EAQ63250.1| 30S ribosomal protein S13 [Marinomonas sp. MED121] Length = 118 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICASTGVAESAKIGSLSDEVLDQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++M+IKRLMD+GC+RG+RHRR LPVRGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRRELSMSIKRLMDMGCHRGIRHRRSLPVRGQRTKTNARTRK 110 >gi|294674747|ref|YP_003575363.1| 30S ribosomal protein S13 [Prevotella ruminicola 23] gi|294473837|gb|ADE83226.1| ribosomal protein S13 [Prevotella ruminicola 23] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V++ + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|24380345|ref|NP_722300.1| 30S ribosomal protein S13 [Streptococcus mutans UA159] gi|290581266|ref|YP_003485658.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025] gi|315222795|ref|ZP_07864681.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211] gi|319940037|ref|ZP_08014391.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV] gi|32363320|sp|Q8DS35|RS13_STRMU RecName: Full=30S ribosomal protein S13 gi|24378363|gb|AAN59606.1|AE015023_7 30S ribosomal protein S13 [Streptococcus mutans UA159] gi|254998165|dbj|BAH88766.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025] gi|315188098|gb|EFU21827.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211] gi|319810751|gb|EFW07078.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV] Length = 121 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|256847787|ref|ZP_05553232.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN] gi|256715476|gb|EEU30452.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN] Length = 121 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNSTAQKILADAGVSEDVRVRDLTPDQEEKIRSQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 E-NIKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|302553567|ref|ZP_07305909.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM 40736] gi|302471185|gb|EFL34278.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM 40736] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111 >gi|291562747|emb|CBL41563.1| 30S ribosomal protein S13 [butyrate-producing bacterium SS3/4] Length = 122 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + P+ RV L + EV I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASADRILAAAGVNPDTRVKDLTDDEVKNIAAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR +A+NIKRL ++GCYRG+RHR+ LP RGQ+T TNART K Sbjct: 61 AETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPCRGQKTKTNARTCK 111 >gi|261400074|ref|ZP_05986199.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970] gi|313667463|ref|YP_004047747.1| 30S ribosomal protein S13 [Neisseria lactamica ST-640] gi|269210299|gb|EEZ76754.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970] gi|309379137|emb|CBX22268.1| 30S ribosomal protein S13 [Neisseria lactamica Y92-1009] gi|313004925|emb|CBN86351.1| 30S ribosomal protein S13 [Neisseria lactamica 020-06] Length = 120 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V + I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGIQAIYGIGAARAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110 >gi|297192678|ref|ZP_06910076.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC 25486] gi|197721667|gb|EDY65575.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC 25486] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + Q EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLQTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|295838429|ref|ZP_06825362.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74] gi|302519634|ref|ZP_07271976.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78] gi|318058103|ref|ZP_07976826.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actG] gi|318076044|ref|ZP_07983376.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actF] gi|197695773|gb|EDY42706.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74] gi|302428529|gb|EFL00345.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL Y+ GIG S+ + P RV L E ++++IR+ + Sbjct: 1 MARLEGVDLPREKRVEVALTYVFGIGRTLSKQTLAATGVDPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + Q EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 DANIQTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111 >gi|53715442|ref|YP_101434.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46] gi|60683414|ref|YP_213558.1| 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343] gi|253566694|ref|ZP_04844147.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5] gi|255011670|ref|ZP_05283796.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] gi|265767572|ref|ZP_06095238.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16] gi|313149506|ref|ZP_07811699.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] gi|81313534|sp|Q5L8D3|RS13_BACFN RecName: Full=30S ribosomal protein S13 gi|81381130|sp|Q64NN2|RS13_BACFR RecName: Full=30S ribosomal protein S13 gi|52218307|dbj|BAD50900.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46] gi|60494848|emb|CAH09655.1| putative 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343] gi|251944866|gb|EES85341.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5] gi|263252877|gb|EEZ24389.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16] gi|301164899|emb|CBW24460.1| putative 30S ribosomal protein S13 [Bacteroides fragilis 638R] gi|313138273|gb|EFR55633.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|325269511|ref|ZP_08136127.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608] gi|325856026|ref|ZP_08171915.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A] gi|327313214|ref|YP_004328651.1| 30S ribosomal protein S13 [Prevotella denticola F0289] gi|324988130|gb|EGC20097.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608] gi|325483698|gb|EGC86662.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A] gi|326945033|gb|AEA20918.1| 30S ribosomal protein S13 [Prevotella denticola F0289] Length = 146 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 24 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREIIGA 83 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 84 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 132 >gi|261880858|ref|ZP_06007285.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361] gi|270332365|gb|EFA43151.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361] Length = 126 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V++ + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWSDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V M+IKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQMSIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|328949255|ref|YP_004366592.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489] gi|328449579|gb|AEB15295.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489] Length = 122 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL Y++GIG S+ IC + P ++ L E ++ ++R+ I Sbjct: 1 MARIAGVDLPN-KHVNIALTYVYGIGRSSANKICEATNVDPHAHLNDLSEDDLTKLRKYI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++++ EG LR + +NIKRLMD+G YRGLRHR+GLP RGQRT TN+RTRK Sbjct: 60 DENFKTEGRLRSEIGLNIKRLMDIGSYRGLRHRKGLPCRGQRTRTNSRTRK 110 >gi|313677143|ref|YP_004055139.1| SSU ribosomal protein s13p [Marivirga tractuosa DSM 4126] gi|312943841|gb|ADR23031.1| SSU ribosomal protein S13P [Marivirga tractuosa DSM 4126] Length = 125 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IP KR V +L YI G+G SS I + +++V + E IR I Sbjct: 1 MARVSGVDIPDNKRGVISLTYIFGLGKSSSAKILEMAGVDADKKVSDWTDDEANSIRTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++++ EG L+ V M+IKRL+D+GCYRGLRHR+GLP+RGQRT N+RTRK Sbjct: 61 SENFKTEGVLKSEVQMSIKRLLDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111 >gi|88704354|ref|ZP_01102068.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71] gi|88701405|gb|EAQ98510.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71] Length = 118 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++ IC + RV L E ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICEASGVEESARVGDLSEDQLDVLRNKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRK 110 >gi|91785442|ref|YP_560648.1| 30S ribosomal protein S13 [Burkholderia xenovorans LB400] gi|170695704|ref|ZP_02886846.1| ribosomal protein S13 [Burkholderia graminis C4D1M] gi|296163298|ref|ZP_06846059.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1] gi|307731232|ref|YP_003908456.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003] gi|123358403|sp|Q13TJ3|RS13_BURXL RecName: Full=30S ribosomal protein S13 gi|91689396|gb|ABE32596.1| SSU ribosomal protein S13P [Burkholderia xenovorans LB400] gi|170139309|gb|EDT07495.1| ribosomal protein S13 [Burkholderia graminis C4D1M] gi|295886437|gb|EFG66294.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1] gi|307585767|gb|ADN59165.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003] Length = 121 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+GIG S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|160896492|ref|YP_001562074.1| 30S ribosomal protein S13 [Delftia acidovorans SPH-1] gi|226712728|sp|A9BRX2|RS13_DELAS RecName: Full=30S ribosomal protein S13 gi|160362076|gb|ABX33689.1| ribosomal protein S13 [Delftia acidovorans SPH-1] Length = 121 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++ IC I +++ +L + ++ +IR + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIYGIGRTTARKICEAAGIAYSKKIKELTDGDLEKIRDQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 -TSLTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|117927540|ref|YP_872091.1| 30S ribosomal protein S13 [Acidothermus cellulolyticus 11B] gi|158706209|sp|A0LRP5|RS13_ACIC1 RecName: Full=30S ribosomal protein S13 gi|117648003|gb|ABK52105.1| SSU ribosomal protein S13P [Acidothermus cellulolyticus 11B] Length = 126 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 85/111 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I P+ RV L + +++++R+ I Sbjct: 1 MARLVGVDLPRDKRLEVALTYIYGIGRTRALETLAATGISPDLRVRDLTDDDLLKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRTHTNARTRK Sbjct: 61 EANYRVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTHTNARTRK 111 >gi|221126765|ref|XP_002165015.1| PREDICTED: similar to 30S ribosomal protein S13 [Hydra magnipapillata] gi|260222206|emb|CBA31537.1| 30S ribosomal protein S13 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 121 Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I ++V L +S++ +IR I Sbjct: 1 MARIAGINIPPHQHSEIGLTAIFGIGRTRARKICEACGIAYSKKVKDLTDSDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110 >gi|281422228|ref|ZP_06253227.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205] gi|281403733|gb|EFB34413.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205] Length = 126 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWSDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|270307865|ref|YP_003329923.1| ribosomal protein S13 [Dehalococcoides sp. VS] gi|270153757|gb|ACZ61595.1| ribosomal protein S13 [Dehalococcoides sp. VS] Length = 129 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLAQAGVDKAIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+ LPVRGQRT TNARTR+ Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRR 111 >gi|221133737|ref|ZP_03560042.1| 30S ribosomal protein S13 [Glaciecola sp. HTCC2999] Length = 118 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I GIG ++ IC + ++ L E+ + ++R + Sbjct: 1 MARIAGINIPEHKHTVIAIQAIFGIGATRAKSICASAGVAESTKIKDLDETTIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|172038950|ref|YP_001805451.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142] gi|254811144|sp|B1WQT3|RS13_CYAA5 RecName: Full=30S ribosomal protein S13 gi|171700404|gb|ACB53385.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142] Length = 127 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SQ+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILAETGVNPDTRVRDLSDEDVAKLRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|319900948|ref|YP_004160676.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108] gi|319415979|gb|ADV43090.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108] Length = 126 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|86141163|ref|ZP_01059709.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217] gi|85831722|gb|EAQ50177.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217] Length = 124 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q I + + +V++ + ++ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAQKILAQADVDENLKVNEWDDDQIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR V+M+IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GS-YKIEGELRSEVSMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|77414587|ref|ZP_00790730.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515] gi|77159385|gb|EAO70553.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515] Length = 110 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|309812450|ref|ZP_07706205.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185] gi|308433755|gb|EFP57632.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185] Length = 124 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV L YI G+G +Q+ + P+ RV L E E++++R + Sbjct: 1 MARLIGVDLPREKRVEVGLTYIFGVGRTRAQETLAATGVNPDTRVRDLTEEELVKLRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EGDLRR +A +I+R +++G Y GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EASFRLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVHGQRTKTNARTRK 111 >gi|301628939|ref|XP_002943606.1| PREDICTED: 30S ribosomal protein S13-like [Xenopus (Silurana) tropicalis] Length = 121 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIYGIGRTRARKICEACGIEYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AR-LTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|184200287|ref|YP_001854494.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201] gi|226712750|sp|B2GJ18|RS13_KOCRD RecName: Full=30S ribosomal protein S13 gi|183580517|dbj|BAG28988.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201] Length = 122 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G + + I + RV L + +++++R I Sbjct: 1 MARLAGVDLPREKRLEVALTYIYGVGRTRALETLEATGISGDVRVKDLTDPQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|221064826|ref|ZP_03540931.1| ribosomal protein S13 [Comamonas testosteroni KF-1] gi|220709849|gb|EED65217.1| ribosomal protein S13 [Comamonas testosteroni KF-1] Length = 121 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG +++ IC I ++V L ++++ +IR + Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 NP-MTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|86132567|ref|ZP_01051160.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134] gi|85816809|gb|EAQ37994.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134] Length = 124 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG +Q+I + +++V + E+ +IR A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRAQEILATANVSEDKKVSDWDDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110 >gi|15828062|ref|NP_302325.1| 30S ribosomal protein S13 [Mycobacterium leprae TN] gi|221230539|ref|YP_002503955.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923] gi|7388130|sp|Q9X7A1|RS13_MYCLE RecName: Full=30S ribosomal protein S13 gi|254811158|sp|B8ZSH9|RS13_MYCLB RecName: Full=30S ribosomal protein S13 gi|4539115|emb|CAB39836.1| putative 30S ribosomal protein S13 [Mycobacterium leprae] gi|13093615|emb|CAC30915.1| 30S ribosomal protein S13 [Mycobacterium leprae] gi|219933646|emb|CAR72057.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923] Length = 124 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIYGIGRTRANEILEATGIERDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R M++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKMEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|149179435|ref|ZP_01857989.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797] gi|148841746|gb|EDL56155.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797] Length = 128 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K V +L Y++GIG ++ DIC+KL I P+ + L + E+ +I + Sbjct: 1 MPRILGVDIPNEKPVYVSLTYLYGIGKVTALDICHKLNINPQLKAKDLTDDELSRIVNML 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEG LRR +I RL D+ YRG+RHRRGLPVRGQ T TNARTRK GK VA Sbjct: 61 DTDYSVEGQLRRATTQDIARLRDIQSYRGIRHRRGLPVRGQNTQTNARTRKG-GKKTVAG 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|303256472|ref|ZP_07342486.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47] gi|331000666|ref|ZP_08324319.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT 11859] gi|302859963|gb|EFL83040.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47] gi|329570878|gb|EGG52589.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT 11859] Length = 121 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++I + + ++V L ++E+ +IR AI Sbjct: 1 MARIAGINIPPNQHAEIGLTAIYGIGRPRAREILEAVGVEKTKKVKDLTDAELERIRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR + ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK K GVA Sbjct: 61 SK-LTVEGDLRREIQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPKKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|189465441|ref|ZP_03014226.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM 17393] gi|224537840|ref|ZP_03678379.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus DSM 14838] gi|189437715|gb|EDV06700.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM 17393] gi|224520526|gb|EEF89631.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus DSM 14838] Length = 126 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEVALTYIYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|157149729|ref|YP_001451211.1| 30S ribosomal protein S13 [Streptococcus gordonii str. Challis substr. CH1] gi|262283558|ref|ZP_06061323.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA] gi|189044302|sp|A8AZK1|RS13_STRGC RecName: Full=30S ribosomal protein S13 gi|157074523|gb|ABV09206.1| ribosomal protein S13p/S18e [Streptococcus gordonii str. Challis substr. CH1] gi|262260615|gb|EEY79316.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA] Length = 121 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDVRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|325916508|ref|ZP_08178777.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937] gi|325537297|gb|EGD09024.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937] Length = 134 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 17 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 77 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 126 >gi|309799082|ref|ZP_07693335.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302] gi|308117317|gb|EFO54740.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302] Length = 121 Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGISEDVRVRDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|224023642|ref|ZP_03642008.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM 18228] gi|224016864|gb|EEF74876.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM 18228] Length = 126 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112 >gi|254516932|ref|ZP_05128990.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3] gi|219674437|gb|EED30805.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3] Length = 118 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++ IC + RV L E ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICAASGVEESARVGDLSEDQLDVLRNKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRK 110 >gi|325921502|ref|ZP_08183357.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865] gi|325548049|gb|EGD19048.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865] Length = 123 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 6 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 66 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 115 >gi|297621701|ref|YP_003709838.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044] gi|297377002|gb|ADI38832.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044] Length = 122 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 57/110 (51%), Positives = 76/110 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G +IP KR++ +L YI+GIG +++I KL + P R L E ++ +I + Sbjct: 1 MPRVIGTDIPDNKRLIISLTYIYGIGPFKAKEIIEKLQLDPNMRARGLTEDDIAKINTLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + DY VEGDLRR V NIKRL+ + CYRG+RHR GLPVRGQRT +NARTR Sbjct: 61 QNDYIVEGDLRRQVQNNIKRLISINCYRGIRHRSGLPVRGQRTQSNARTR 110 >gi|21241758|ref|NP_641340.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str. 306] gi|66769621|ref|YP_244383.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. 8004] gi|78046576|ref|YP_362751.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84625023|ref|YP_452395.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879273|ref|YP_202200.6| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331] gi|166710853|ref|ZP_02242060.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575511|ref|YP_001912440.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188992833|ref|YP_001904843.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. B100] gi|289665158|ref|ZP_06486739.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669365|ref|ZP_06490440.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294627859|ref|ZP_06706438.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664164|ref|ZP_06729550.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325925366|ref|ZP_08186768.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118] gi|32363342|sp|Q8NKX3|RS13_XANAC RecName: Full=30S ribosomal protein S13 gi|81304424|sp|Q4URG0|RS13_XANC8 RecName: Full=30S ribosomal protein S13 gi|91207633|sp|Q3BWW2|RS13_XANC5 RecName: Full=30S ribosomal protein S13 gi|91207634|sp|Q5GWV6|RS13_XANOR RecName: Full=30S ribosomal protein S13 gi|123521159|sp|Q2P006|RS13_XANOM RecName: Full=30S ribosomal protein S13 gi|226712804|sp|B0RU61|RS13_XANCB RecName: Full=30S ribosomal protein S13 gi|226712805|sp|B2SQT1|RS13_XANOP RecName: Full=30S ribosomal protein S13 gi|18378766|gb|AAD00322.2| ribosomal protein S13 [Xanthomonas campestris pv. campestris] gi|21107130|gb|AAM35876.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str. 306] gi|66574953|gb|AAY50363.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. 8004] gi|78035006|emb|CAJ22651.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84368963|dbj|BAE70121.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|167734593|emb|CAP52803.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris] gi|188519963|gb|ACD57908.1| ribosomal protein S13p/S18e [Xanthomonas oryzae pv. oryzae PXO99A] gi|292597773|gb|EFF41931.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606067|gb|EFF49332.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544244|gb|EGD15625.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118] Length = 118 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|120437152|ref|YP_862838.1| 30S ribosomal protein S13 [Gramella forsetii KT0803] gi|158706234|sp|A0M576|RS13_GRAFK RecName: Full=30S ribosomal protein S13 gi|117579302|emb|CAL67771.1| 30S ribosomal protein S13 [Gramella forsetii KT0803] Length = 124 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q+I + + ++V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEILAQAKVDESKKVSDWDDDEIGKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + +EG+LR V ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GQ-FTIEGELRTEVQISIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|218440645|ref|YP_002378974.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7424] gi|226712726|sp|B7KI09|RS13_CYAP7 RecName: Full=30S ribosomal protein S13 gi|218173373|gb|ACK72106.1| ribosomal protein S13 [Cyanothece sp. PCC 7424] Length = 127 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG S++I + P+ RV L + + + +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSKEILANTGVNPDTRVKDLSDEDALALRSYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR MNIKRL+D+G YRG RHR+GLPVRGQ Sbjct: 61 EANYQIEGDLRRWETMNIKRLVDIGTYRGRRHRQGLPVRGQ 101 >gi|152998249|ref|YP_001343084.1| 30S ribosomal protein S13 [Marinomonas sp. MWYL1] gi|189044280|sp|A6W370|RS13_MARMS RecName: Full=30S ribosomal protein S13 gi|150839173|gb|ABR73149.1| ribosomal protein S13 [Marinomonas sp. MWYL1] Length = 118 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICAATGVAETAKIGSLSDDVLDELRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK Sbjct: 61 AK-YTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRK 110 >gi|256420683|ref|YP_003121336.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588] gi|256035591|gb|ACU59135.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588] Length = 126 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI GIG ++Q I K I ++V + E IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQYILEKSGIDFNKKVKDWNDDEQAAIRNVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEG LR V MNIKRL+D+ CYRGLRHR+GLP+RGQRT TN+RTRK Sbjct: 61 NGEFKVEGQLRSEVQMNIKRLLDIACYRGLRHRKGLPLRGQRTRTNSRTRK 111 >gi|119511157|ref|ZP_01630274.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414] gi|119464145|gb|EAW45065.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414] Length = 126 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/101 (58%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S +I + P+ RV L ++EV +R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYIYGIGLTRSLEILAATGVNPDTRVKDLSDAEVAALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR AM+IKRL+D+GCYRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLEAMSIKRLVDIGCYRGRRHRMGLPVRGQ 101 >gi|29348113|ref|NP_811616.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482] gi|153805980|ref|ZP_01958648.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185] gi|160883041|ref|ZP_02064044.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483] gi|237717423|ref|ZP_04547904.1| 30S ribosomal protein S13 [Bacteroides sp. D1] gi|237718719|ref|ZP_04549200.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4] gi|253569615|ref|ZP_04847025.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6] gi|255690027|ref|ZP_05413702.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565] gi|260175440|ref|ZP_05761852.1| 30S ribosomal protein S13 [Bacteroides sp. D2] gi|262406188|ref|ZP_06082738.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22] gi|293372096|ref|ZP_06618487.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f] gi|294644081|ref|ZP_06721858.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a] gi|294806541|ref|ZP_06765380.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b] gi|298386203|ref|ZP_06995760.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14] gi|298483088|ref|ZP_07001269.1| 30S ribosomal protein S13 [Bacteroides sp. D22] gi|299144600|ref|ZP_07037668.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23] gi|315923669|ref|ZP_07919909.1| 30S ribosomal protein S13 [Bacteroides sp. D2] gi|32363309|sp|Q8A499|RS13_BACTN RecName: Full=30S ribosomal protein S13 gi|29340016|gb|AAO77810.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482] gi|149130657|gb|EDM21863.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185] gi|156111513|gb|EDO13258.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483] gi|229443406|gb|EEO49197.1| 30S ribosomal protein S13 [Bacteroides sp. D1] gi|229451851|gb|EEO57642.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4] gi|251841634|gb|EES69715.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6] gi|260624634|gb|EEX47505.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565] gi|262357063|gb|EEZ06153.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22] gi|292632888|gb|EFF51475.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f] gi|292640605|gb|EFF58846.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a] gi|294446236|gb|EFG14864.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b] gi|295085405|emb|CBK66928.1| SSU ribosomal protein S13P [Bacteroides xylanisolvens XB1A] gi|298261431|gb|EFI04298.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14] gi|298270832|gb|EFI12412.1| 30S ribosomal protein S13 [Bacteroides sp. D22] gi|298515091|gb|EFI38972.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23] gi|313697544|gb|EFS34379.1| 30S ribosomal protein S13 [Bacteroides sp. D2] Length = 126 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|187925593|ref|YP_001897235.1| 30S ribosomal protein S13 [Burkholderia phytofirmans PsJN] gi|226712709|sp|B2T728|RS13_BURPP RecName: Full=30S ribosomal protein S13 gi|187716787|gb|ACD18011.1| ribosomal protein S13 [Burkholderia phytofirmans PsJN] Length = 121 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+G+G S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|259500916|ref|ZP_05743818.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335] gi|302190631|ref|ZP_07266885.1| 30S ribosomal protein S13 [Lactobacillus iners AB-1] gi|309803620|ref|ZP_07697710.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d] gi|309804981|ref|ZP_07699039.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c] gi|309806699|ref|ZP_07700694.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b] gi|309808456|ref|ZP_07702355.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a] gi|309809065|ref|ZP_07702938.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D] gi|312871219|ref|ZP_07731317.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a] gi|312872776|ref|ZP_07732841.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1] gi|312874098|ref|ZP_07734133.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d] gi|312874881|ref|ZP_07734900.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b] gi|315654002|ref|ZP_07906918.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195] gi|325912347|ref|ZP_08174743.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D] gi|325913206|ref|ZP_08175575.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B] gi|329920624|ref|ZP_08277311.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G] gi|259167610|gb|EEW52105.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335] gi|308164218|gb|EFO66475.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d] gi|308165741|gb|EFO67966.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c] gi|308166879|gb|EFO69063.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b] gi|308168284|gb|EFO70403.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a] gi|308170510|gb|EFO72530.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D] gi|311089626|gb|EFQ48051.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b] gi|311090438|gb|EFQ48847.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d] gi|311091818|gb|EFQ50197.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1] gi|311093233|gb|EFQ51579.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a] gi|315488698|gb|EFU78344.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195] gi|325475818|gb|EGC78988.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D] gi|325477470|gb|EGC80613.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B] gi|328935882|gb|EGG32342.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G] Length = 116 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEPTAKVICEAAGVSEDVRTSDLTPEQQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ ++VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-FRVEGDLRREVNLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|284053324|ref|ZP_06383534.1| 30S ribosomal protein S13 [Arthrospira platensis str. Paraca] gi|291567806|dbj|BAI90078.1| 30S ribosomal protein S13 [Arthrospira platensis NIES-39] Length = 127 Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLSDADVAALRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +YQVEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|319760351|ref|YP_004124289.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF] gi|318039065|gb|ADV33615.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF] Length = 119 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GVN+P K V AL I+GIG +++IC + I R++QL E + ++R I Sbjct: 1 MVRIVGVNVPDRKHAVIALMSIYGIGKSLAKEICLNVGIDLHVRINQLSEENIDKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR + +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 SK-YVIEGDLRREINLNIKRLIDLGTYRGLRHRRSLPVRGQRTRTNARTRK 110 >gi|163783359|ref|ZP_02178352.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1] gi|159881467|gb|EDP74978.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1] Length = 105 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 60/105 (57%), Positives = 77/105 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG ++IC I +RV +L E+ +R+ I Sbjct: 1 MARIAGVDLPDNKRLEIALTYIYGIGKTRVREICESTGIDCRKRVGELSPEELNTLRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 ++ Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T T Sbjct: 61 DEHYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRT 105 >gi|160888375|ref|ZP_02069378.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492] gi|167764349|ref|ZP_02436474.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC 43183] gi|218131303|ref|ZP_03460107.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697] gi|270294728|ref|ZP_06200929.1| 30S ribosomal protein S13 [Bacteroides sp. D20] gi|317476333|ref|ZP_07935582.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA] gi|317477728|ref|ZP_07936921.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36] gi|156862052|gb|EDO55483.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492] gi|167697754|gb|EDS14333.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC 43183] gi|217986520|gb|EEC52856.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697] gi|270273975|gb|EFA19836.1| 30S ribosomal protein S13 [Bacteroides sp. D20] gi|316906073|gb|EFV27834.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36] gi|316907359|gb|EFV29064.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA] Length = 126 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|73748341|ref|YP_307580.1| 30S ribosomal protein S13 [Dehalococcoides sp. CBDB1] gi|147669121|ref|YP_001213939.1| 30S ribosomal protein S13 [Dehalococcoides sp. BAV1] gi|289432389|ref|YP_003462262.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT] gi|91207700|sp|Q3ZZP9|RS13_DEHSC RecName: Full=30S ribosomal protein S13 gi|189040501|sp|A5FRW9|RS13_DEHSB RecName: Full=30S ribosomal protein S13 gi|73660057|emb|CAI82664.1| ribosomal protein S13 [Dehalococcoides sp. CBDB1] gi|146270069|gb|ABQ17061.1| SSU ribosomal protein S13P [Dehalococcoides sp. BAV1] gi|288946109|gb|ADC73806.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT] Length = 129 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+ LPVRGQRT TNARTR+ Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRR 111 >gi|170780764|ref|YP_001709096.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. sepedonicus] gi|169155332|emb|CAQ00435.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. sepedonicus] Length = 124 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G SS I RV L + ++I +R I Sbjct: 1 MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKNIRVKDLSDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK Sbjct: 61 EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRK 111 >gi|15610596|ref|NP_217977.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Rv] gi|15843055|ref|NP_338092.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CDC1551] gi|31794636|ref|NP_857129.1| 30S ribosomal protein S13 [Mycobacterium bovis AF2122/97] gi|121639380|ref|YP_979604.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663325|ref|YP_001284848.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|148824670|ref|YP_001289424.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis F11] gi|167966773|ref|ZP_02549050.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|215405499|ref|ZP_03417680.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|215413374|ref|ZP_03422058.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|215428967|ref|ZP_03426886.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T92] gi|218755238|ref|ZP_03534034.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis GM 1503] gi|224991876|ref|YP_002646565.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172] gi|253800505|ref|YP_003033506.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 1435] gi|254234052|ref|ZP_04927377.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C] gi|254366061|ref|ZP_04982106.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. Haarlem] gi|254552563|ref|ZP_05143010.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188515|ref|ZP_05765989.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CPHL_A] gi|260202643|ref|ZP_05770134.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|260206831|ref|ZP_05774322.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis K85] gi|289445060|ref|ZP_06434804.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|289449164|ref|ZP_06438908.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A] gi|289555731|ref|ZP_06444941.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605] gi|289576196|ref|ZP_06456423.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85] gi|289747293|ref|ZP_06506671.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|289752184|ref|ZP_06511562.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92] gi|289763642|ref|ZP_06523020.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503] gi|294995766|ref|ZP_06801457.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 210] gi|297636119|ref|ZP_06953899.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN 4207] gi|297733119|ref|ZP_06962237.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN R506] gi|298526944|ref|ZP_07014353.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|306777808|ref|ZP_07416145.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001] gi|306782526|ref|ZP_07420863.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002] gi|306786345|ref|ZP_07424667.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003] gi|306790714|ref|ZP_07429036.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004] gi|306795243|ref|ZP_07433545.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005] gi|306799432|ref|ZP_07437734.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006] gi|306805279|ref|ZP_07441947.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008] gi|306809464|ref|ZP_07446132.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007] gi|306969572|ref|ZP_07482233.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009] gi|306973926|ref|ZP_07486587.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010] gi|307081635|ref|ZP_07490805.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011] gi|307086241|ref|ZP_07495354.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012] gi|313660450|ref|ZP_07817330.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN V2475] gi|6094153|sp|O06327|RS13_MYCTU RecName: Full=30S ribosomal protein S13 gi|38605717|sp|P45813|RS13_MYCBO RecName: Full=30S ribosomal protein S13 gi|158706248|sp|A1KPE6|RS13_MYCBP RecName: Full=30S ribosomal protein S13 gi|158706252|sp|A5U8D6|RS13_MYCTA RecName: Full=30S ribosomal protein S13 gi|254811157|sp|C1AHR8|RS13_MYCBT RecName: Full=30S ribosomal protein S13 gi|2104383|emb|CAB08726.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium tuberculosis H37Rv] gi|13883399|gb|AAK47906.1| ribosomal protein S13 [Mycobacterium tuberculosis CDC1551] gi|31620233|emb|CAD95676.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium bovis AF2122/97] gi|121495028|emb|CAL73514.1| Probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599581|gb|EAY58685.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C] gi|134151574|gb|EBA43619.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. Haarlem] gi|148507477|gb|ABQ75286.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|148723197|gb|ABR07822.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis F11] gi|224774991|dbj|BAH27797.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172] gi|253322008|gb|ACT26611.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 1435] gi|289417979|gb|EFD15219.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|289422122|gb|EFD19323.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A] gi|289440363|gb|EFD22856.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605] gi|289540627|gb|EFD45205.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85] gi|289687821|gb|EFD55309.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|289692771|gb|EFD60200.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92] gi|289711148|gb|EFD75164.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503] gi|298496738|gb|EFI32032.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|308213892|gb|EFO73291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001] gi|308324843|gb|EFP13694.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002] gi|308329097|gb|EFP17948.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003] gi|308332905|gb|EFP21756.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004] gi|308336565|gb|EFP25416.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005] gi|308340440|gb|EFP29291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006] gi|308344304|gb|EFP33155.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007] gi|308348195|gb|EFP37046.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008] gi|308352919|gb|EFP41770.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009] gi|308356762|gb|EFP45613.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010] gi|308360707|gb|EFP49558.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011] gi|308364322|gb|EFP53173.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012] gi|323717944|gb|EGB27133.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CDC1551A] gi|326905306|gb|EGE52239.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis W-148] gi|328460236|gb|AEB05659.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 4207] Length = 124 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111 >gi|148273770|ref|YP_001223331.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831700|emb|CAN02669.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 124 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G SS I + RV L + ++I +R I Sbjct: 1 MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKDIRVKDLSDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRK 111 >gi|269955460|ref|YP_003325249.1| 30S ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894] gi|269304141|gb|ACZ29691.1| ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894] Length = 124 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+G+G + I P+ RV L +++++ +R + Sbjct: 1 MARLIGVDLPREKRVEIALTYIYGVGRTRASQTLEATGISPDVRVKDLDDAQLVALRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGSFKLEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359] gi|254811172|sp|B9K8B1|RS13_THENN RecName: Full=30S ribosomal protein S13 gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359] Length = 125 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+V AL YI+GIG S +I + P++RV +L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGVDPDKRVGELTDEEISKITKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++VEG+LR V NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK Sbjct: 61 QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRK 111 >gi|58427778|gb|AAW76815.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 134 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 17 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 77 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 126 >gi|16329919|ref|NP_440647.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803] gi|2500458|sp|P73299|RS13_SYNY3 RecName: Full=30S ribosomal protein S13 gi|1652405|dbj|BAA17327.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803] Length = 127 Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 75/101 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG S +I + + P+ RV L + + +++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSHEILDATGVSPDVRVKDLSDEDALKLRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++Y++EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 DENYEIEGDLRRWEAMNIKRLGDIGTYRGRRHRQGLPVRGQ 101 >gi|161523452|ref|YP_001578464.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|167587749|ref|ZP_02380137.1| ribosomal protein S13 [Burkholderia ubonensis Bu] gi|189351775|ref|YP_001947403.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|206558664|ref|YP_002229424.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315] gi|221201588|ref|ZP_03574626.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M] gi|221207337|ref|ZP_03580347.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2] gi|221213475|ref|ZP_03586450.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1] gi|254253497|ref|ZP_04946815.1| Ribosomal protein S13 [Burkholderia dolosa AUO158] gi|226712706|sp|B4E5E3|RS13_BURCJ RecName: Full=30S ribosomal protein S13 gi|226712707|sp|A9ADL6|RS13_BURM1 RecName: Full=30S ribosomal protein S13 gi|124896106|gb|EAY69986.1| Ribosomal protein S13 [Burkholderia dolosa AUO158] gi|160340881|gb|ABX13967.1| ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|189335797|dbj|BAG44867.1| small subunit ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|198034701|emb|CAR50568.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315] gi|221166927|gb|EED99398.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1] gi|221172925|gb|EEE05362.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2] gi|221178404|gb|EEE10813.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M] gi|325529701|gb|EGD06564.1| 30S ribosomal protein S13 [Burkholderia sp. TJI49] Length = 121 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG S+ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|253581363|ref|ZP_04858589.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725] gi|251836727|gb|EES65261.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725] Length = 118 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|113476557|ref|YP_722618.1| 30S ribosomal protein S13 [Trichodesmium erythraeum IMS101] gi|123056506|sp|Q110C9|RS13_TRIEI RecName: Full=30S ribosomal protein S13 gi|110167605|gb|ABG52145.1| SSU ribosomal protein S13P [Trichodesmium erythraeum IMS101] Length = 127 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SQ+I + + P+ RV L +++V IR + Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGLSRSQEILAETDVNPDTRVKDLSDADVAAIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +Y+VEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QNNYEVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|257470857|ref|ZP_05634947.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185] gi|317065060|ref|ZP_07929545.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185] gi|313690736|gb|EFS27571.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185] Length = 118 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR AI Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIR-AI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 60 VETVKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|260909774|ref|ZP_05916468.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str. F0295] gi|288929316|ref|ZP_06423161.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str. F0108] gi|260636199|gb|EEX54195.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str. F0295] gi|288329418|gb|EFC68004.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str. F0108] Length = 126 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|67923560|ref|ZP_00517033.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501] gi|67854586|gb|EAM49872.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501] Length = 127 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 75/101 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG +Q+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRAQEILAETGVNPDTRVRDLSDEDVAKLRGCI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E++YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 EENYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|189460707|ref|ZP_03009492.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136] gi|198273980|ref|ZP_03206512.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135] gi|189432666|gb|EDV01651.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136] gi|198273058|gb|EDY97327.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135] Length = 126 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112 >gi|110639512|ref|YP_679721.1| 30S ribosomal protein S13 [Cytophaga hutchinsonii ATCC 33406] gi|122966555|sp|Q11QD5|RS13_CYTH3 RecName: Full=30S ribosomal protein S13 gi|110282193|gb|ABG60379.1| SSU ribosomal protein S13P [Cytophaga hutchinsonii ATCC 33406] Length = 125 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IP KR +L YI+GIG S+Q I K + +++V + + E +R I Sbjct: 1 MARISGVDIPDNKRGEVSLTYIYGIGRNSAQSILTKAGVNWDKKVSEWNDDEANAVRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ EG L+ V ++IKRLMD+GCYRGLRHR+GLPVRGQRT N RTRK Sbjct: 61 ASEHKTEGALKSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQRTKNNCRTRK 111 >gi|78186092|ref|YP_374135.1| 30S ribosomal protein S13 [Chlorobium luteolum DSM 273] gi|91207712|sp|Q3B6D9|RS13_PELLD RecName: Full=30S ribosomal protein S13 gi|78165994|gb|ABB23092.1| SSU ribosomal protein S13P [Chlorobium luteolum DSM 273] Length = 125 Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG +++ I + I P+R++ L ++E IR+ + + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGNTTAKTILKRAGIAPDRKISDLNDAEAHAIRELVAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG R + IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK Sbjct: 62 EYKVEGQARGEQQLAIKRLMDIGCYRGLRHRRSLPVRGQNTQTNARTRK 110 >gi|258648135|ref|ZP_05735604.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259] gi|260852016|gb|EEX71885.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259] Length = 126 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/109 (54%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRGIKVSDWTDDQAGKIREIISN 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRGEIQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112 >gi|285017341|ref|YP_003375052.1| 30s ribosomal protein s13 [Xanthomonas albilineans GPE PC73] gi|283472559|emb|CBA15064.1| probable 30s ribosomal protein s13 [Xanthomonas albilineans] Length = 118 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEAAGVTSTTKIRDLSEPEIERLRLEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|315145360|gb|EFT89376.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2141] Length = 121 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG +IPR KRVV +L YI+GIG +++ + + + + RV L + IR I Sbjct: 1 MARIAGGDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T NARTRK Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRK 110 >gi|150003365|ref|YP_001298109.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482] gi|254881346|ref|ZP_05254056.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA] gi|294777843|ref|ZP_06743287.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510] gi|319640347|ref|ZP_07995072.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A] gi|158706336|sp|A6KYH3|RS13_BACV8 RecName: Full=30S ribosomal protein S13 gi|149931789|gb|ABR38487.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482] gi|254834139|gb|EET14448.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA] gi|294448297|gb|EFG16853.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510] gi|317388122|gb|EFV68976.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A] Length = 126 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|149279640|ref|ZP_01885769.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39] gi|149229676|gb|EDM35066.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39] Length = 125 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KR L YI GIG ++Q I + I ++V + E+ IR I Sbjct: 1 MARISGIDLPRNKRGEIGLTYIFGIGRSTAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT N+RTRK Sbjct: 61 NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111 >gi|57234754|ref|YP_181243.1| 30S ribosomal protein S13 [Dehalococcoides ethenogenes 195] gi|91207699|sp|Q3Z956|RS13_DEHE1 RecName: Full=30S ribosomal protein S13 gi|57225202|gb|AAW40259.1| ribosomal protein S13 [Dehalococcoides ethenogenes 195] Length = 129 Score = 119 bits (299), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKAIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++Y+VEGDLR+ +A+NIKRL+D+GCYRG RH+ LPVRGQRT TNARTR+ Sbjct: 61 DKEYRVEGDLRKEIALNIKRLIDIGCYRGNRHKHNLPVRGQRTKTNARTRR 111 >gi|296875381|ref|ZP_06899455.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912] gi|312867026|ref|ZP_07727237.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405] gi|319945812|ref|ZP_08020062.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641] gi|322390683|ref|ZP_08064197.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903] gi|296433574|gb|EFH19347.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912] gi|311097508|gb|EFQ55741.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405] gi|319747877|gb|EFW00121.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641] gi|321142656|gb|EFX38120.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903] Length = 121 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGVSEDIRVRDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|303237462|ref|ZP_07324027.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN] gi|302482282|gb|EFL45312.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQEKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEG+LR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGELRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|118411078|ref|YP_874473.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum] gi|125987678|sp|A0T0J8|RR13_PHATC RecName: Full=30S ribosomal protein S13, chloroplastic gi|116739825|gb|ABK20696.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum] Length = 123 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YIHGIG S++ I I PE R L E + +RQ + Sbjct: 1 MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|254383147|ref|ZP_04998501.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1] gi|194342046|gb|EDX23012.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 81/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ G+G S++I + P+ RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGVGRTRSKEILAATGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREIQADIRRKVEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|239618240|ref|YP_002941562.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1] gi|259494683|sp|C5CGH7|RS13_KOSOT RecName: Full=30S ribosomal protein S13 gi|239507071|gb|ACR80558.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1] Length = 121 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL YI+GIG +++I I ++RV L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKTFVALTYIYGIGPARAKEILKNTNIDGDKRVKDLTDEEISRISKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEG+LR+ V NIKRL+++GCYRG+RH+ GLPVRGQ+TH+NARTRK Sbjct: 61 TDHYKVEGELRQEVERNIKRLIEIGCYRGIRHKIGLPVRGQKTHSNARTRK 111 >gi|194335469|ref|YP_002017263.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1] gi|226712772|sp|B4SBX1|RS13_PELPB RecName: Full=30S ribosomal protein S13 gi|194307946|gb|ACF42646.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1] Length = 125 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/109 (55%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S++ I + I P R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRASAESILQRAGIAPNRKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 QYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110 >gi|190572965|ref|YP_001970810.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a] gi|254521260|ref|ZP_05133315.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14] gi|226712790|sp|B2FQK5|RS13_STRMK RecName: Full=30S ribosomal protein S13 gi|190010887|emb|CAQ44496.1| putative 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a] gi|219718851|gb|EED37376.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14] Length = 118 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|194334837|ref|YP_002016697.1| 30S ribosomal protein S13 [Prosthecochloris aestuarii DSM 271] gi|226712776|sp|B4S5A4|RS13_PROA2 RecName: Full=30S ribosomal protein S13 gi|194312655|gb|ACF47050.1| ribosomal protein S13 [Prosthecochloris aestuarii DSM 271] Length = 125 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 78/109 (71%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I P +++ ++ + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTSARNILERAGIDPAKKIAEMSDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 EYKVEGQARGLQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110 >gi|299830397|ref|YP_003734612.1| ribosomal protein S13 [Kryptoperidinium foliaceum] gi|297385099|gb|ADI40397.1| ribosomal protein S13 [Kryptoperidinium foliaceum] Length = 123 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ AL YIHGIG +++ I I E RV+ L + + +RQ I Sbjct: 1 MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKQIIETADIDSEVRVYDLTTEQTVALRQTI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 EESDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|319787904|ref|YP_004147379.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1] gi|317466416|gb|ADV28148.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1] Length = 118 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPTHKHVWVGLQSIYGIGRTRSKKVCEAANVATTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YIVEGDLRREVGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|291280124|ref|YP_003496959.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1] gi|290754826|dbj|BAI81203.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1] Length = 122 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V L YI GIG +++ I + I +R+ +L E E+ IR+ I Sbjct: 1 MARIAGVDVPNNKKVEIGLTYIFGIGRSTAKKIVEETGIDSNKRIGELSEQEISSIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119 + + +VEG+LR+ + +NIKRLM++ CYRG RH+ +P RGQ+T +NARTR+ GK G+ Sbjct: 61 DSNLKVEGELRKEIGLNIKRLMEINCYRGYRHKNNMPCRGQKTRSNARTRRGLAGKRGIK 120 Query: 120 RK 121 RK Sbjct: 121 RK 122 >gi|183601968|ref|ZP_02963337.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis HN019] gi|241190457|ref|YP_002967851.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195863|ref|YP_002969418.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218853|gb|EDT89495.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis HN019] gi|240248849|gb|ACS45789.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250417|gb|ACS47356.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793444|gb|ADG32979.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis V9] Length = 125 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R + + Y+G+RHR+GLPVRGQRT TNARTRK Sbjct: 61 ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRK 111 >gi|89902967|ref|YP_525438.1| 30S ribosomal protein S13 [Rhodoferax ferrireducens T118] gi|122478014|sp|Q21QP6|RS13_RHOFD RecName: Full=30S ribosomal protein S13 gi|89347704|gb|ABD71907.1| SSU ribosomal protein S13P [Rhodoferax ferrireducens T118] Length = 121 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I G+G ++ IC+ I ++V L + E+ +IR + Sbjct: 1 MARIAGINIPPQQHSEIGLTAIFGVGRNRARKICDACGIAYSKKVKDLTDLELEKIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110 >gi|78064947|ref|YP_367716.1| 30S ribosomal protein S13 [Burkholderia sp. 383] gi|107024280|ref|YP_622607.1| 30S ribosomal protein S13 [Burkholderia cenocepacia AU 1054] gi|116688395|ref|YP_834018.1| 30S ribosomal protein S13 [Burkholderia cenocepacia HI2424] gi|170731705|ref|YP_001763652.1| 30S ribosomal protein S13 [Burkholderia cenocepacia MC0-3] gi|254246580|ref|ZP_04939901.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184] gi|91207692|sp|Q39KE4|RS13_BURS3 RecName: Full=30S ribosomal protein S13 gi|123371102|sp|Q1BRX1|RS13_BURCA RecName: Full=30S ribosomal protein S13 gi|158706217|sp|A0K3P8|RS13_BURCH RecName: Full=30S ribosomal protein S13 gi|226712705|sp|B1JU45|RS13_BURCC RecName: Full=30S ribosomal protein S13 gi|77965692|gb|ABB07072.1| SSU ribosomal protein S13P [Burkholderia sp. 383] gi|105894469|gb|ABF77634.1| SSU ribosomal protein S13P [Burkholderia cenocepacia AU 1054] gi|116646484|gb|ABK07125.1| SSU ribosomal protein S13P [Burkholderia cenocepacia HI2424] gi|124871356|gb|EAY63072.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184] gi|169814947|gb|ACA89530.1| ribosomal protein S13 [Burkholderia cenocepacia MC0-3] Length = 121 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G S+ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|325280944|ref|YP_004253486.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712] gi|324312753|gb|ADY33306.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712] Length = 125 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR AL YI+GIG S++ I ++ I + +V + ++ +R+ I Sbjct: 1 MARIVGVDLPSNKRGEIALTYIYGIGRSSARAILSEAGIDYDLKVKDWNDDQLGAVRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG+LR +V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 GTEYKVEGELRSSVQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 111 >gi|126662241|ref|ZP_01733240.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38] gi|126625620|gb|EAZ96309.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38] Length = 124 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR + AL YI GIG ++DI K + +++V + E+ IR A+ Sbjct: 1 MARIAGVDIPKQKRGIIALTYIFGIGKSRAKDILAKAQVSEDKKVQDWNDDEIGAIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SY-FKIEGELRSEIQLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|239996315|ref|ZP_04716839.1| 30S ribosomal protein S13 [Alteromonas macleodii ATCC 27126] gi|332142184|ref|YP_004427922.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep ecotype'] gi|226712686|sp|B4RT50|RS13_ALTMD RecName: Full=30S ribosomal protein S13 gi|327552206|gb|AEA98924.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep ecotype'] Length = 118 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I+G+G ++ IC + ++ +L E+ + ++R + Sbjct: 1 MARIAGINIPEHKHAVIAIQAIYGVGPTRAKSICAGAGVAENTKIKELDEATIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110 >gi|118473987|ref|YP_885903.1| 30S ribosomal protein S13 [Mycobacterium smegmatis str. MC2 155] gi|158706249|sp|A0QSL5|RS13_MYCS2 RecName: Full=30S ribosomal protein S13 gi|118175274|gb|ABK76170.1| ribosomal protein S13p/S18e [Mycobacterium smegmatis str. MC2 155] Length = 124 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S +I I R L + +V +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSNEILAATGIDKNMRTKDLTDDQVTVLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|284992849|ref|YP_003411403.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160] gi|284066094|gb|ADB77032.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 83/111 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG +++ + P+ RV L + +++++R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIYGIGKTHAKETLAATGVSPDLRVRDLGDEDLLRLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K Sbjct: 61 DEHFRVEGDLRREVAADIRRKVEIGCYQGLRHRRGLPVHGQRTRTNARSSK 111 >gi|219682880|ref|YP_002469263.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis AD011] gi|219620530|gb|ACL28687.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis AD011] gi|289178181|gb|ADC85427.1| SSU ribosomal protein S13P [Bifidobacterium animalis subsp. lactis BB-12] Length = 136 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 12 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R + + Y+G+RHR+GLPVRGQRT TNARTRK Sbjct: 72 ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRK 122 >gi|329962290|ref|ZP_08300296.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057] gi|328530398|gb|EGF57275.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILEKAGVDKDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|331699148|ref|YP_004335387.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190] gi|326953837|gb|AEA27534.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S +I N I + R L + ++ +R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILNATGISKDLRSKDLSDEDLTALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNAR RK Sbjct: 61 EANFRVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARGRK 111 >gi|255536131|ref|YP_003096502.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium 3519-10] gi|255342327|gb|ACU08440.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium 3519-10] Length = 125 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR V L YI+GIG +S +I I +++V++ + E+ IR I Sbjct: 1 MARISGIDLPKNKRGVIGLTYIYGIGRSTSSEILKAAGISEDKKVNEWNDDELALIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +VEG+LR +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 TENIKVEGELRSETQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111 >gi|77361713|ref|YP_341288.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis TAC125] gi|119472061|ref|ZP_01614319.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7] gi|91207718|sp|Q3IJK6|RS13_PSEHT RecName: Full=30S ribosomal protein S13 gi|76876624|emb|CAI87846.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas haloplanktis TAC125] gi|119445196|gb|EAW26488.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7] Length = 118 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILAATGIAETTKIGELSDETLDVLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|325299108|ref|YP_004259025.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170] gi|324318661|gb|ADY36552.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170] Length = 126 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112 >gi|167564393|ref|ZP_02357309.1| 30S ribosomal protein S13 [Burkholderia oklahomensis EO147] gi|167571540|ref|ZP_02364414.1| 30S ribosomal protein S13 [Burkholderia oklahomensis C6786] Length = 121 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICAASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO] gi|166991604|sp|A8F4T6|RS13_THELT RecName: Full=30S ribosomal protein S13 gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO] Length = 128 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL Y++G+G + +I I P++RV L + EV +I + I Sbjct: 1 MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEG+LR + NIKRL+D+GCYRG RH+ GLPVRGQRT +NARTRK Sbjct: 61 QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRK 111 >gi|194364555|ref|YP_002027165.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia R551-3] gi|226712789|sp|B4SLH2|RS13_STRM5 RecName: Full=30S ribosomal protein S13 gi|194347359|gb|ACF50482.1| ribosomal protein S13 [Stenotrophomonas maltophilia R551-3] Length = 118 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|294155441|ref|YP_003559825.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145] gi|291600534|gb|ADE20030.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145] Length = 122 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRVV +L YI+GIG ++ IC + I + RV L E E+ +IR+ + Sbjct: 1 MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKINEDSRVKSLSEEELSRIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK Sbjct: 60 AKKFTTEGDLRREVNLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRK 110 >gi|300728419|ref|ZP_07061781.1| ribosomal protein S13p/S18e [Prevotella bryantii B14] gi|299774338|gb|EFI70968.1| ribosomal protein S13p/S18e [Prevotella bryantii B14] Length = 126 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI GIG SS I ++ + + +V + + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDQAGVNRDLKVSEWTDEQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++VEGDLR ++MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 GFKVEGDLRSEISMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRK 112 >gi|315127934|ref|YP_004069937.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913] gi|315016448|gb|ADT69786.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913] Length = 118 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R+A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDETLDVLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|124003685|ref|ZP_01688533.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134] gi|123990740|gb|EAY30207.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134] Length = 125 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR +L YI+GIG +++ I + I ++V + E +IR I Sbjct: 1 MARLAGVDIPDKKRGEVSLTYIYGIGLSTARTILERAGIDRNKKVIDWTDEESNEIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG L+ V ++IKRLMD+GCYRG+RHR+GLP+RGQ+T N+RTRK Sbjct: 61 SSEYKVEGALKSEVQLSIKRLMDIGCYRGIRHRKGLPLRGQKTKNNSRTRK 111 >gi|311748490|ref|ZP_07722275.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1] gi|126577007|gb|EAZ81255.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1] Length = 125 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR L YI GIG S++ I +K I +++ + + E IR I Sbjct: 1 MARIAGVDIPDNKRGEIGLTYIFGIGRSSAKAILSKAGISFDKKAGEWDDDESTAIRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++++ EG L+ + +NIKRLMD+GCYRGLRHR+GLPVRGQ T NARTRK Sbjct: 61 AEEFRTEGVLKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQHTKNNARTRK 111 >gi|298345437|ref|YP_003718124.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063] gi|304390993|ref|ZP_07372945.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655843|ref|ZP_07908741.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333] gi|315656231|ref|ZP_07909122.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235498|gb|ADI66630.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063] gi|304325876|gb|EFL93122.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315489907|gb|EFU79534.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333] gi|315493233|gb|EFU82833.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 124 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + + P+ RV L E E+I +R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIYGIGRTRATETLAATGVSPDTRVKDLTEDELIALRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNAR+RK Sbjct: 61 QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARSRK 111 >gi|125717010|ref|YP_001034143.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK36] gi|323350963|ref|ZP_08086621.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66] gi|158706286|sp|A3CK88|RS13_STRSV RecName: Full=30S ribosomal protein S13 gi|125496927|gb|ABN43593.1| 30S ribosomal protein S13, putative [Streptococcus sanguinis SK36] gi|322122945|gb|EFX94651.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66] gi|324989979|gb|EGC21920.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK353] gi|324991838|gb|EGC23763.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK405] gi|324996272|gb|EGC28180.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK678] gi|325686428|gb|EGD28458.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK72] gi|325689208|gb|EGD31214.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK115] gi|325695787|gb|EGD37684.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK150] gi|325697999|gb|EGD39882.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK160] gi|327458454|gb|EGF04810.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1] gi|327463699|gb|EGF10015.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1057] gi|327467358|gb|EGF12858.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK330] gi|327471719|gb|EGF17160.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK408] gi|327490440|gb|EGF22222.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1058] gi|328945194|gb|EGG39348.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1087] Length = 121 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTIEQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|294790436|ref|ZP_06755594.1| 30S ribosomal protein S13 [Scardovia inopinata F0304] gi|294458333|gb|EFG26686.1| 30S ribosomal protein S13 [Scardovia inopinata F0304] Length = 123 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 1 MARLAGVDIPNEKRIEVALTYIFGVGRTRAKETLEATGISPDIRVKDLTDEQLIQLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK Sbjct: 61 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 111 >gi|163752894|ref|ZP_02160018.1| 30S ribosomal protein S13 [Kordia algicida OT-1] gi|161326626|gb|EDP97951.1| 30S ribosomal protein S13 [Kordia algicida OT-1] Length = 124 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G ++++ + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKHKRGVIALTYIFGVGRSRAKEVLATAKVSEDTKVSDWTDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GT-YTIEGELRTEVQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|332170582|gb|AEE19837.1| 30S ribosomal protein S13 [Krokinobacter diaphorus 4H-3-7-5] Length = 124 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG +++I + +++V + E+ +IR A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRAEEILAAANVSEDKKVSDWDDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110 >gi|186684488|ref|YP_001867684.1| 30S ribosomal protein S13 [Nostoc punctiforme PCC 73102] gi|226712769|sp|B2ITN3|RS13_NOSP7 RecName: Full=30S ribosomal protein S13 gi|186466940|gb|ACC82741.1| ribosomal protein S13 [Nostoc punctiforme PCC 73102] Length = 126 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 73/101 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +Q+I + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRAQEIIAATGVNPDTRVKDLSDADVTALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQVEGDLRR ++NIKRL+D+G YRG RHR GLPVRGQ Sbjct: 61 ESNYQVEGDLRRLESLNIKRLVDIGTYRGRRHRMGLPVRGQ 101 >gi|293364084|ref|ZP_06610820.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2] gi|292552574|gb|EFF41348.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2] Length = 122 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRVV +L YI+GIG ++ IC + I RV L E ++ +IR+ Sbjct: 1 MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKIDENARVKSLSEEQLSKIREVA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q + EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 KQ-FTTEGDLRREVTLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRK 110 >gi|302536276|ref|ZP_07288618.1| 30S ribosomal protein S13 [Streptomyces sp. C] gi|302445171|gb|EFL16987.1| 30S ribosomal protein S13 [Streptomyces sp. C] Length = 126 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + + EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111 >gi|212695282|ref|ZP_03303410.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855] gi|237711698|ref|ZP_04542179.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA] gi|237725861|ref|ZP_04556342.1| 30S ribosomal protein S13 [Bacteroides sp. D4] gi|265753117|ref|ZP_06088686.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA] gi|212662192|gb|EEB22766.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855] gi|229435669|gb|EEO45746.1| 30S ribosomal protein S13 [Bacteroides dorei 5_1_36/D4] gi|229454393|gb|EEO60114.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA] gi|263236303|gb|EEZ21798.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA] Length = 126 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAARIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112 >gi|296454846|ref|YP_003661990.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301] gi|296184278|gb|ADH01160.1| ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301] Length = 125 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRTKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|224827039|ref|ZP_03700136.1| ribosomal protein S13 [Lutiella nitroferrum 2002] gi|224600705|gb|EEG06891.1| ribosomal protein S13 [Lutiella nitroferrum 2002] Length = 120 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP V L I+GIG +Q IC + +V L ++E+ ++R+ + Sbjct: 1 MARIAGVNIPNHAHAVIGLQAIYGIGQTRAQQICAAAGVVTSTKVKDLTDAEMDKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + M+IKRLMD+G YRG+RHRRGLP RGQRT TNARTRK Sbjct: 61 AK-FTVEGDLRREITMSIKRLMDMGSYRGMRHRRGLPCRGQRTRTNARTRK 110 >gi|324999249|ref|ZP_08120361.1| 30S ribosomal protein S13 [Pseudonocardia sp. P1] Length = 126 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI G+G S++I AI + R L + +V ++R I Sbjct: 1 MARVAGVDLPREKRMEIALTYIFGVGRARSKEILEATAISADLRSKDLTDEDVTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ QVEGDLRR + +I+R +++G Y+G+RHRRGLPVRGQRT TNAR RK Sbjct: 61 EEHLQVEGDLRREIQADIRRKIEIGSYQGIRHRRGLPVRGQRTKTNARGRK 111 >gi|312889343|ref|ZP_07748897.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603] gi|311298220|gb|EFQ75335.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603] Length = 125 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI GIG ++QDI + I +V + ++ IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQDILTEAGIDFNTKVQDWTDEQLTSIRGII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG LR V +NIKRLMD+GCYRG RHR+GLP+RGQRT N+RTRK Sbjct: 61 NERIKVEGALRSEVQLNIKRLMDIGCYRGTRHRKGLPLRGQRTKNNSRTRK 111 >gi|255530538|ref|YP_003090910.1| 30S ribosomal protein S13 [Pedobacter heparinus DSM 2366] gi|255343522|gb|ACU02848.1| ribosomal protein S13 [Pedobacter heparinus DSM 2366] Length = 125 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KR L YI G+G ++Q I + I ++V + E+ IR I Sbjct: 1 MARISGIDLPRNKRGEIGLTYIFGVGRATAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT N+RTRK Sbjct: 61 NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111 >gi|225011669|ref|ZP_03702107.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A] gi|225004172|gb|EEG42144.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A] Length = 124 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IP+ KR V AL YI GIG +Q I + ++V + + E +IR+ + Sbjct: 1 MARISGVDIPKQKRGVIALTYIFGIGKSRAQSILETAKVDENKKVSEWSDDETGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 -GSFKIEGELRSEVQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|240167780|ref|ZP_04746439.1| 30S ribosomal protein S13 [Mycobacterium kansasii ATCC 12478] Length = 124 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIYGIGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + ++EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|311744781|ref|ZP_07718577.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272] gi|311311898|gb|EFQ81819.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272] Length = 122 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL Y+ GIG + + I P RVH L +S+++ +R I Sbjct: 1 MARLVGVDLPREKRIEIALTYVFGIGRTRATETLAATGIDPHTRVHALDDSQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E YQVEGDLRR V +I+R M++G Y+G RHR LPVRGQRT TNARTRK Sbjct: 61 EAHYQVEGDLRREVTADIRRKMEIGSYQGRRHRAHLPVRGQRTKTNARTRK 111 >gi|261367777|ref|ZP_05980660.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] gi|282570575|gb|EFB76110.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] Length = 123 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L Y++GIG ++ +I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRIQVGLTYVYGIGQSTADEILAGTGINPDTRVKDLTSDEEAKIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ VEGDLRR VA++IKRL ++ CYRG+RHR+GLP RGQRT TNART K Sbjct: 61 DKNNIMVEGDLRRNVALDIKRLTEIQCYRGVRHRKGLPCRGQRTKTNARTCK 112 >gi|71894586|ref|YP_278694.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53] gi|91207707|sp|Q4A5I8|RS13_MYCS5 RecName: Full=30S ribosomal protein S13 gi|71851374|gb|AAZ43983.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53] Length = 122 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG + +IC K + + +L E+++ ++R+ + Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGKSLASEICKKANVDENTKTAELTEAQLSKLRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y EGDLRR V +NIKR M++ CYRG+RHR+GLPVRGQ T NARTRK Sbjct: 60 AKAYTTEGDLRREVTLNIKRYMEIKCYRGIRHRKGLPVRGQSTQKNARTRK 110 >gi|83814971|ref|YP_445189.1| 30S ribosomal protein S13 [Salinibacter ruber DSM 13855] gi|294507073|ref|YP_003571131.1| 30S ribosomal protein S13 [Salinibacter ruber M8] gi|123529118|sp|Q2S3P2|RS13_SALRD RecName: Full=30S ribosomal protein S13 gi|83756365|gb|ABC44478.1| ribosomal protein S13p/S18e [Salinibacter ruber DSM 13855] gi|294343401|emb|CBH24179.1| 30S ribosomal protein S13 [Salinibacter ruber M8] Length = 127 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV++P KR AL I+G+G + +I K + ++R + ESE ++R+ I Sbjct: 1 MPRIEGVDVPDDKRGEIALTDIYGVGQSRASEILEKAEVSVDKRPREWTESETKRVRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+DY VEG LR V MNIKRL ++GCYRG RHR GLPV GQRT TNARTRK Sbjct: 61 EEDYTVEGQLRTEVQMNIKRLKEIGCYRGKRHREGLPVNGQRTRTNARTRK 111 >gi|23466154|ref|NP_696757.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705] gi|46190440|ref|ZP_00121530.2| COG0099: Ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|189440593|ref|YP_001955674.1| 30S ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|227546500|ref|ZP_03976549.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621034|ref|ZP_04664065.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133898|ref|YP_004001237.1| rpsm [Bifidobacterium longum subsp. longum BBMN68] gi|317483426|ref|ZP_07942416.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA] gi|322689905|ref|YP_004209639.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 157F] gi|322691846|ref|YP_004221416.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM 1217] gi|32363330|sp|Q8G3Z5|RS13_BIFLO RecName: Full=30S ribosomal protein S13 gi|226712697|sp|B3DQD8|RS13_BIFLD RecName: Full=30S ribosomal protein S13 gi|23326891|gb|AAN25393.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705] gi|189429028|gb|ACD99176.1| Ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|227213049|gb|EEI80928.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516135|gb|EEQ56002.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516447|emb|CBK70063.1| SSU ribosomal protein S13P [Bifidobacterium longum subsp. longum F8] gi|311773192|gb|ADQ02680.1| RpsM [Bifidobacterium longum subsp. longum BBMN68] gi|316915112|gb|EFV36544.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA] gi|320456702|dbj|BAJ67324.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM 1217] gi|320461241|dbj|BAJ71861.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 157F] Length = 125 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|53720798|ref|YP_109784.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243] gi|53723831|ref|YP_104143.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 23344] gi|76808694|ref|YP_335117.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710b] gi|121599064|ref|YP_994433.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1] gi|124383459|ref|YP_001027918.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229] gi|126441434|ref|YP_001060727.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668] gi|126450605|ref|YP_001083013.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247] gi|126452378|ref|YP_001068011.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a] gi|134283124|ref|ZP_01769825.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305] gi|167001676|ref|ZP_02267468.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20] gi|167721554|ref|ZP_02404790.1| 30S ribosomal protein S13 [Burkholderia pseudomallei DM98] gi|167740528|ref|ZP_02413302.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 14] gi|167817733|ref|ZP_02449413.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 91] gi|167826130|ref|ZP_02457601.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 9] gi|167838189|ref|ZP_02465048.1| 30S ribosomal protein S13 [Burkholderia thailandensis MSMB43] gi|167847642|ref|ZP_02473150.1| 30S ribosomal protein S13 [Burkholderia pseudomallei B7210] gi|167896214|ref|ZP_02483616.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 7894] gi|167904596|ref|ZP_02491801.1| 30S ribosomal protein S13 [Burkholderia pseudomallei NCTC 13177] gi|167912861|ref|ZP_02499952.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 112] gi|167920820|ref|ZP_02507911.1| 30S ribosomal protein S13 [Burkholderia pseudomallei BCC215] gi|217424717|ref|ZP_03456214.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576] gi|226198266|ref|ZP_03793837.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9] gi|237814122|ref|YP_002898573.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346] gi|238562961|ref|ZP_00439643.2| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4] gi|242316204|ref|ZP_04815220.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b] gi|254175202|ref|ZP_04881863.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399] gi|254180362|ref|ZP_04886960.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655] gi|254190325|ref|ZP_04896833.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237] gi|254198511|ref|ZP_04904932.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13] gi|254201216|ref|ZP_04907580.1| 30S ribosomal protein S13 [Burkholderia mallei FMH] gi|254206557|ref|ZP_04912908.1| 30S ribosomal protein S13 [Burkholderia mallei JHU] gi|254261560|ref|ZP_04952614.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a] gi|254300599|ref|ZP_04968044.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e] gi|254357095|ref|ZP_04973369.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280] gi|81378947|sp|Q63Q34|RS13_BURPS RecName: Full=30S ribosomal protein S13 gi|81604188|sp|Q62GM8|RS13_BURMA RecName: Full=30S ribosomal protein S13 gi|91207691|sp|Q3JMT6|RS13_BURP1 RecName: Full=30S ribosomal protein S13 gi|158706218|sp|A3P090|RS13_BURP0 RecName: Full=30S ribosomal protein S13 gi|166231899|sp|A3MRX7|RS13_BURM7 RecName: Full=30S ribosomal protein S13 gi|166231900|sp|A2S7J9|RS13_BURM9 RecName: Full=30S ribosomal protein S13 gi|166231901|sp|A1V880|RS13_BURMS RecName: Full=30S ribosomal protein S13 gi|166231902|sp|A3NEF6|RS13_BURP6 RecName: Full=30S ribosomal protein S13 gi|52211212|emb|CAH37201.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243] gi|52427254|gb|AAU47847.1| ribosomal protein S13 [Burkholderia mallei ATCC 23344] gi|76578147|gb|ABA47622.1| ribosomal protein S13p/S18e [Burkholderia pseudomallei 1710b] gi|121227874|gb|ABM50392.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1] gi|124291479|gb|ABN00748.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229] gi|126220927|gb|ABN84433.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668] gi|126226020|gb|ABN89560.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a] gi|126243475|gb|ABO06568.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247] gi|134245319|gb|EBA45412.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305] gi|147747110|gb|EDK54186.1| 30S ribosomal protein S13 [Burkholderia mallei FMH] gi|147752099|gb|EDK59165.1| 30S ribosomal protein S13 [Burkholderia mallei JHU] gi|148026159|gb|EDK84244.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280] gi|157810485|gb|EDO87655.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e] gi|157938001|gb|EDO93671.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237] gi|160696247|gb|EDP86217.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399] gi|169655251|gb|EDS87944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13] gi|184210901|gb|EDU07944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655] gi|217392173|gb|EEC32198.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576] gi|225929786|gb|EEH25802.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9] gi|237506633|gb|ACQ98951.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346] gi|238521645|gb|EEP85095.1| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4] gi|242139443|gb|EES25845.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b] gi|243062573|gb|EES44759.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20] gi|254220249|gb|EET09633.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a] Length = 121 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110 >gi|296141065|ref|YP_003648308.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162] gi|296029199|gb|ADG79969.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162] Length = 123 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/112 (51%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + +I + P+ R L + ++ ++R I Sbjct: 1 MARLMGVDLPREKRMEIALTYIYGIGRTRATEILTATGVSPDLRSKDLSDEDLTKLRDFI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E DY+VEGDLRR V +I+R +++ CY+G+RHRRGLPVRGQRT TNARTRK Sbjct: 61 EGTDYKVEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVRGQRTKTNARTRK 112 >gi|154494403|ref|ZP_02033723.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC 43184] gi|218262264|ref|ZP_03476787.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii DSM 18315] gi|154085847|gb|EDN84892.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC 43184] gi|218223487|gb|EEC96137.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii DSM 18315] Length = 126 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG +S+ I +K I + +V + + ++R+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSASKSILDKAGIDRDIKVKDWTDDQAAKVREVIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRK 112 >gi|325287071|ref|YP_004262861.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489] gi|324322525|gb|ADY29990.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489] Length = 124 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I K + + +V + E+ +IR A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGRSRAKEILAKAQVSEDTKVSDWNDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EG+LR + ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SE-FTIEGELRSEIQLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|332037271|gb|EGI73726.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis ANT/505] Length = 118 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDEILDVLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|81429354|ref|YP_396355.1| 30S ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K] gi|91207704|sp|Q38UT5|RS13_LACSS RecName: Full=30S ribosomal protein S13 gi|78610997|emb|CAI56049.1| 30S Ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K] Length = 121 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI GIG ++ + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRDKQIVIALTYIFGIGNTTAVKVLADAGVPTDVRTRDLTPDQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DT-VKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRK 110 >gi|170077664|ref|YP_001734302.1| ribosomal protein S13 [Synechococcus sp. PCC 7002] gi|226712794|sp|B1XJI6|RS13_SYNP2 RecName: Full=30S ribosomal protein S13 gi|169885333|gb|ACA99046.1| ribosomal protein S13 [Synechococcus sp. PCC 7002] Length = 125 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL Y++GIG +Q+I + P+ RV L + + +++R + Sbjct: 1 MARIAGVDLPRDKRIEIALTYVYGIGLSRAQEIIANTGVNPDTRVRDLSDEDALKLRSYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +YQVEGDLRR +MNIKRL+D+G YRG RHR+GLPVRGQ Sbjct: 61 TDNYQVEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQ 101 >gi|83720972|ref|YP_443549.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264] gi|167582600|ref|ZP_02375474.1| 30S ribosomal protein S13 [Burkholderia thailandensis TXDOH] gi|167620714|ref|ZP_02389345.1| 30S ribosomal protein S13 [Burkholderia thailandensis Bt4] gi|257137665|ref|ZP_05585927.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264] gi|123536224|sp|Q2SU50|RS13_BURTA RecName: Full=30S ribosomal protein S13 gi|83654797|gb|ABC38860.1| ribosomal protein S13p/S18e [Burkholderia thailandensis E264] Length = 121 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|116334245|ref|YP_795772.1| 30S ribosomal protein S13 [Lactobacillus brevis ATCC 367] gi|122269073|sp|Q03PY1|RS13_LACBA RecName: Full=30S ribosomal protein S13 gi|116099592|gb|ABJ64741.1| SSU ribosomal protein S13P [Lactobacillus brevis ATCC 367] Length = 121 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++PR KR+ L YI GIG ++ I +P + RV L + ++R + Sbjct: 1 MPRIAGVDLPRDKRIAYGLTYIFGIGINTAHKIVADAGVPEDVRVRDLTPDQEDKVRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y+VEGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-YKVEGDLRREVSLNIKNLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|34849415|gb|AAP58914.1| ribosomal protein S13 [Spiroplasma kunkelii CR2-3x] Length = 121 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KRVV AL YI+GIG SQ I + I + RV L E E+ IR I Sbjct: 1 MARIGGVDIPNDKRVVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ + NART K Sbjct: 61 AK-LKTEGDLRREVALNIKRLMEIGSYRGMRHRKSLPTRGQSSKQNARTVK 110 >gi|41410328|ref|NP_963164.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776833|ref|ZP_05218349.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. avium ATCC 25291] gi|81412936|sp|Q73S46|RS13_MYCPA RecName: Full=30S ribosomal protein S13 gi|158706370|sp|A0QKU8|RS13_MYCA1 RecName: Full=30S ribosomal protein S13 gi|41399162|gb|AAS06780.1| RpsM [Mycobacterium avium subsp. paratuberculosis K-10] Length = 124 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|118602235|ref|YP_903450.1| 30S ribosomal protein S13 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|158706273|sp|A1AVM2|RS13_RUTMC RecName: Full=30S ribosomal protein S13 gi|118567174|gb|ABL01979.1| SSU ribosomal protein S13P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 117 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG ++ C L + P +V + E ++ IR + Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAKATCKILKLDPATKVVDIAEDQLELIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR V+M+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK Sbjct: 61 AK-YEVEGDLRRQVSMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRK 110 >gi|296120767|ref|YP_003628545.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] gi|296013107|gb|ADG66346.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] Length = 128 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/121 (49%), Positives = 80/121 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K +L Y++G+G + +IC KL I P+R+ +L + E+ +I + Sbjct: 1 MPRIQGVDIPNDKPTYISLQYLYGVGDFRAFEICFKLEIDPQRKARELSDDELARISAML 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEG LRR++ NI RL D+ YRGLRHRRGLP RGQRT TNARTRK K + Sbjct: 61 DKDYLVEGSLRRSIQQNISRLRDIQSYRGLRHRRGLPCRGQRTRTNARTRKGIKKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|296168682|ref|ZP_06850431.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896591|gb|EFG76232.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 124 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDKDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|294786436|ref|ZP_06751690.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305] gi|294485269|gb|EFG32903.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305] Length = 134 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 12 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK Sbjct: 72 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 122 >gi|315225999|ref|ZP_07867787.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105] gi|315120131|gb|EFT83263.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105] Length = 123 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 1 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK Sbjct: 61 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 111 >gi|326334522|ref|ZP_08200733.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693291|gb|EGD35219.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 124 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I K + + +V + ++ +IR+A+ Sbjct: 1 MARIAGIDLPKHKRGVIGLTYIFGIGKSRAKEILKKAQVDEDIKVSDWNDEQITRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK Sbjct: 61 SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRK 110 >gi|315225423|ref|ZP_07867237.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287] gi|314944696|gb|EFS96731.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287] Length = 124 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEITRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK Sbjct: 61 -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110 >gi|32423693|gb|AAP81236.1| ribosomal protein S13 [Candidatus Portiera aleyrodidarum] Length = 116 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG NIP K+V +L YI+GIG + IC ++ I +V L ++ ++R+ + Sbjct: 1 MARIAGRNIPDNKQVWVSLTYIYGIGKYRANSICKRIGIDRNVKVRDLNSIQLDKVRKQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + + VEG+LRR V++NIKRLMDLGCYRGLRH+R LPVRGQRT TNART K KG Sbjct: 61 CK-FVVEGELRREVSVNIKRLMDLGCYRGLRHKRCLPVRGQRTKTNARTCKNINKG 115 >gi|283768439|ref|ZP_06341351.1| 30S ribosomal protein S13 [Bulleidia extructa W1219] gi|283104831|gb|EFC06203.1| 30S ribosomal protein S13 [Bulleidia extructa W1219] Length = 121 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+IPR K + +L YI+GIG +++ I + I P R +L + + IR + Sbjct: 1 MPRIAGVDIPRHKVIGISLTYIYGIGPTTAKKILEECGIDPSTRTSELTDEQETAIRSKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR A++IKRLM++G YRG RHRRGLPVRGQRT TNARTRK Sbjct: 61 DS-VKTEGDLRRDTALDIKRLMEIGSYRGTRHRRGLPVRGQRTKTNARTRK 110 >gi|256820005|ref|YP_003141284.1| 30S ribosomal protein S13 [Capnocytophaga ochracea DSM 7271] gi|256581588|gb|ACU92723.1| ribosomal protein S13 [Capnocytophaga ochracea DSM 7271] Length = 124 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDEEITRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK Sbjct: 61 -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110 >gi|325955020|ref|YP_004238680.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922] gi|323437638|gb|ADX68102.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922] Length = 125 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR V L YI+G+G ++ I + I +++V + + E+ IR +I Sbjct: 1 MARISGVDLPKNKRGVIGLTYIYGVGKSTASRILAENNISEDKKVSEWTDDEINAIRNSI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 NEGIKVEGELRSEVQLNIKRLMDIGCTRGIRHRLGLPLRGQRTKNNSRTRK 111 >gi|284033974|ref|YP_003383905.1| 30S ribosomal protein S13 [Kribbella flavida DSM 17836] gi|283813267|gb|ADB35106.1| ribosomal protein S13 [Kribbella flavida DSM 17836] Length = 123 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 79/111 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + I ++RVH+L + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEVALTYIFGVGRTRALKTLEATGISGDKRVHELGDEELVKLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R +++G Y+G RHR GLPVRGQRT TNAR+RK Sbjct: 61 EGNYKIEGDLRREVTADIRRKIEIGSYQGRRHRSGLPVRGQRTRTNARSRK 111 >gi|88861472|ref|ZP_01136098.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2] gi|88816520|gb|EAR26349.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2] Length = 118 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+G+G S+ I I ++ +L + + +R+ + Sbjct: 1 MARIAGINVPDHKHAVIALTAIYGVGKTRSKAILAATGIAETTKIGELNDETLDVLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 LK-YTVEGDLRREITLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110 >gi|239818006|ref|YP_002946916.1| ribosomal protein S13 [Variovorax paradoxus S110] gi|319796383|ref|YP_004158023.1| 30S ribosomal protein s13 [Variovorax paradoxus EPS] gi|259494694|sp|C5CQ78|RS13_VARPS RecName: Full=30S ribosomal protein S13 gi|239804583|gb|ACS21650.1| ribosomal protein S13 [Variovorax paradoxus S110] gi|315598846|gb|ADU39912.1| 30S ribosomal protein S13 [Variovorax paradoxus EPS] Length = 121 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L ++++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTRARQICEASGIEYSKKIKDLTDADLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK Sbjct: 61 AL-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110 >gi|213693064|ref|YP_002323650.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254811130|sp|B7GNB6|RS13_BIFLI RecName: Full=30S ribosomal protein S13 gi|213524525|gb|ACJ53272.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459242|dbj|BAJ69863.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 125 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|291457227|ref|ZP_06596617.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213] gi|291381062|gb|EFE88580.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213] Length = 125 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|319942195|ref|ZP_08016511.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B] gi|319804248|gb|EFW01140.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B] Length = 121 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG S+ I + IP ++V L ++E+ +IR A+ Sbjct: 1 MARIAGINIPPQQHAEIGLTAIYGIGRSRSRLILEQCGIPCTKKVQDLTDAELERIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLP RGQRT TNARTRK K GV Sbjct: 61 SK-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPCRGQRTRTNARTRKGPRKVGVTL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|319952173|ref|YP_004163440.1| ssu ribosomal protein s13p [Cellulophaga algicola DSM 14237] gi|319420833|gb|ADV47942.1| SSU ribosomal protein S13P [Cellulophaga algicola DSM 14237] Length = 124 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I + + +V + E+ +IR+++ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGNSRAKEILANAQVSEDTKVSDWNDDEISRIRESV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|257453245|ref|ZP_05618544.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_5R] gi|257467160|ref|ZP_05631471.1| 30S ribosomal protein S13 [Fusobacterium gonidiaformans ATCC 25563] gi|315918291|ref|ZP_07914531.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC 25563] gi|317059779|ref|ZP_07924264.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R] gi|313685455|gb|EFS22290.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R] gi|313692166|gb|EFS29001.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC 25563] Length = 118 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR+ I Sbjct: 1 MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|254819218|ref|ZP_05224219.1| 30S ribosomal protein S13 [Mycobacterium intracellulare ATCC 13950] Length = 124 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S +I I R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILEATGIDKNLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|225010539|ref|ZP_03701010.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C] gi|225005368|gb|EEG43319.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C] Length = 124 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGRTRAKEILIAAGVSEDTKVSDWNDDEISKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRTGLPLRGQRTKNNSRTRK 110 >gi|307297370|ref|ZP_07577176.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916630|gb|EFN47012.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2] Length = 122 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL YI+GIG+ S +I + I +R L + EV +I + I Sbjct: 1 MARILGVELPNNKKTFVALTYIYGIGYTRSNEILSGTEIDGNKRAKDLTDEEVSKIAKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEG+LR V +IKRL+++G YRG RHR GLPVRGQ+TH+N RTRK Sbjct: 61 NEHYKVEGELRTEVDRSIKRLIEIGSYRGYRHRNGLPVRGQKTHSNGRTRK 111 >gi|258651409|ref|YP_003200565.1| 30S ribosomal protein S13 [Nakamurella multipartita DSM 44233] gi|258554634|gb|ACV77576.1| ribosomal protein S13 [Nakamurella multipartita DSM 44233] Length = 125 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S ++ I P+ R L + +V+ +R AI Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSLELLAATGISPDLRSKDLTDEDVLALRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D +VEGDLRR V +I+R M++G Y+GLRHRR LPVRGQRT TNARTRK Sbjct: 61 DAADLKVEGDLRREVQADIRRKMEIGSYQGLRHRRHLPVRGQRTKTNARTRK 112 >gi|116515237|ref|YP_802866.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285367|sp|Q057C6|RS13_BUCCC RecName: Full=30S ribosomal protein S13 gi|58384670|gb|AAW72685.1| 30S ribosomal protein S13 [Buchnera aphidicola (Cinara cedri)] gi|116257091|gb|ABJ90773.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 119 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+NI K ++ AL I+GIG S+ IC + I + +++ L + ++ +R I Sbjct: 1 MTRIAGINISDKKHILVALTSIYGIGISLSKKICFSIGIRCDVKINSLTKEKIESLRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR +NIKRLMD+GCYRGLRHR+ LPVRGQRT TNARTRK Sbjct: 61 SK-FLVEGDLRREKTINIKRLMDIGCYRGLRHRKHLPVRGQRTKTNARTRK 110 >gi|283780397|ref|YP_003371152.1| 30S ribosomal protein S13 [Pirellula staleyi DSM 6068] gi|283438850|gb|ADB17292.1| ribosomal protein S13 [Pirellula staleyi DSM 6068] Length = 127 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K V +L Y++G+G ++++C K I E+R L E E+ ++ + Sbjct: 1 MPRLLGVDIPNDKPTVISLGYLYGVGDHVARELCQKAGIDTEKRARDLSEEELARLATLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+DY VEG LRR V NI RL D+ CYRG+RHR GLPVRGQRT TNARTRK Sbjct: 61 ERDYTVEGPLRRLVQQNINRLRDIKCYRGIRHRLGLPVRGQRTKTNARTRK 111 >gi|283782777|ref|YP_003373531.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05] gi|297242946|ref|ZP_06926884.1| ribosomal protein S13 [Gardnerella vaginalis AMD] gi|308235471|ref|ZP_07666208.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14018] gi|311115144|ref|YP_003986365.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019] gi|283441639|gb|ADB14105.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05] gi|296889157|gb|EFH27891.1| ribosomal protein S13 [Gardnerella vaginalis AMD] gi|310946638|gb|ADP39342.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019] Length = 125 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ + P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGVNPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|297625815|ref|YP_003687578.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921580|emb|CBL56134.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 124 Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 80/111 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG + I I P+ RV + +++++++R I Sbjct: 1 MARLQGVDLPREKRLEVALTYIFGIGKTRADAILEATGISPDIRVKDVTDAQLVELRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y+VEGDLRR+V +I+R +++G Y+G RHR GLPVRGQRT TNARTRK Sbjct: 61 DANYEVEGDLRRSVDADIRRKIEIGTYQGRRHRAGLPVRGQRTRTNARTRK 111 >gi|30468201|ref|NP_849088.1| ribosomal protein S13 [Cyanidioschyzon merolae strain 10D] gi|32363230|sp|P59758|RR13_CYAME RecName: Full=30S ribosomal protein S13, chloroplastic gi|30409301|dbj|BAC76250.1| 30S ribosomal protein S13 [Cyanidioschyzon merolae strain 10D] Length = 123 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/109 (51%), Positives = 79/109 (72%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGV++P K++ AL Y++GIG +++I + P+ RV + + + +++RQ IEQ Sbjct: 2 RIAGVDLPSQKKLEVALTYLYGIGKTLAKEILEACQLSPDLRVRDVNDEQSMRLRQYIEQ 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +E DL+R +MNIKRLMD+GCYRG RHR LPVRGQRT +NARTR+ Sbjct: 62 KYLIESDLKRVESMNIKRLMDIGCYRGRRHRALLPVRGQRTRSNARTRR 110 >gi|256821684|ref|YP_003145647.1| 30S ribosomal protein S13 [Kangiella koreensis DSM 16069] gi|256795223|gb|ACV25879.1| ribosomal protein S13 [Kangiella koreensis DSM 16069] Length = 118 Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K AL I+GIG +Q IC + ++ L + ++ +R + Sbjct: 1 MARIAGINIPVHKHADVALTAIYGIGRPRAQKICAAAGVETTAKIKDLNDDQIENLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR + MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK Sbjct: 61 SK-FTVEGDLRREINMNIKRLMDLGCFRGIRHRRNLPLRGQRTKTNARTRK 110 >gi|32491314|ref|NP_871568.1| 30S ribosomal protein S13 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|32363313|sp|Q8D1Z0|RS13_WIGBR RecName: Full=30S ribosomal protein S13 gi|25166521|dbj|BAC24711.1| rpsM [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 118 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVNIP K +V AL I+GIG ++ IC K I ++V+ L SE+ IR + Sbjct: 1 MTRIAGVNIPEKKHIVIALKKIYGIGNVLARKICKKTGINFSKKVNSLDSSEIELIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EGDLRR + +NIKRL+DLG YRGLRH++ LPVRGQRT TNARTRK Sbjct: 61 LK-LKIEGDLRREMTLNIKRLIDLGTYRGLRHKKHLPVRGQRTKTNARTRK 110 >gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] gi|282855173|ref|ZP_06264505.1| 30S ribosomal protein S13 [Propionibacterium acnes J139] gi|289424822|ref|ZP_06426604.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187] gi|289427645|ref|ZP_06429357.1| 30S ribosomal protein S13 [Propionibacterium acnes J165] gi|295131355|ref|YP_003582018.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137] gi|81611215|sp|Q6A6Q8|RS13_PROAC RecName: Full=30S ribosomal protein S13 gi|50840888|gb|AAT83555.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] gi|282581761|gb|EFB87146.1| 30S ribosomal protein S13 [Propionibacterium acnes J139] gi|289154785|gb|EFD03468.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187] gi|289159136|gb|EFD07328.1| 30S ribosomal protein S13 [Propionibacterium acnes J165] gi|291376040|gb|ADD99894.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137] gi|313763206|gb|EFS34570.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA1] gi|313773121|gb|EFS39087.1| 30S ribosomal protein S13 [Propionibacterium acnes HL074PA1] gi|313793289|gb|EFS41347.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA1] gi|313801067|gb|EFS42335.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA2] gi|313808808|gb|EFS47262.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA2] gi|313810398|gb|EFS48112.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA1] gi|313812266|gb|EFS49980.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA1] gi|313816543|gb|EFS54257.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA1] gi|313817987|gb|EFS55701.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA2] gi|313819900|gb|EFS57614.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA1] gi|313823391|gb|EFS61105.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA2] gi|313824862|gb|EFS62576.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA1] gi|313828396|gb|EFS66110.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA2] gi|313830104|gb|EFS67818.1| 30S ribosomal protein S13 [Propionibacterium acnes HL007PA1] gi|313832624|gb|EFS70338.1| 30S ribosomal protein S13 [Propionibacterium acnes HL056PA1] gi|313837980|gb|EFS75694.1| 30S ribosomal protein S13 [Propionibacterium acnes HL086PA1] gi|314914363|gb|EFS78194.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA4] gi|314917683|gb|EFS81514.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA1] gi|314919585|gb|EFS83416.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA3] gi|314924150|gb|EFS87981.1| 30S ribosomal protein S13 [Propionibacterium acnes HL001PA1] gi|314925757|gb|EFS89588.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA3] gi|314930175|gb|EFS94006.1| 30S ribosomal protein S13 [Propionibacterium acnes HL067PA1] gi|314957152|gb|EFT01256.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA1] gi|314957793|gb|EFT01896.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA1] gi|314960837|gb|EFT04938.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA2] gi|314963511|gb|EFT07611.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA1] gi|314964879|gb|EFT08978.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA2] gi|314969906|gb|EFT14004.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA1] gi|314973047|gb|EFT17143.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA1] gi|314975543|gb|EFT19638.1| 30S ribosomal protein S13 [Propionibacterium acnes HL045PA1] gi|314979768|gb|EFT23862.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA2] gi|314982285|gb|EFT26378.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA3] gi|314984826|gb|EFT28918.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA1] gi|314986085|gb|EFT30177.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA2] gi|314988700|gb|EFT32791.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA3] gi|315077132|gb|EFT49199.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA2] gi|315079819|gb|EFT51795.1| 30S ribosomal protein S13 [Propionibacterium acnes HL078PA1] gi|315083186|gb|EFT55162.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA2] gi|315086860|gb|EFT58836.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA3] gi|315089952|gb|EFT61928.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA1] gi|315090474|gb|EFT62450.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA4] gi|315093707|gb|EFT65683.1| 30S ribosomal protein S13 [Propionibacterium acnes HL060PA1] gi|315096726|gb|EFT68702.1| 30S ribosomal protein S13 [Propionibacterium acnes HL038PA1] gi|315097954|gb|EFT69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA2] gi|315100597|gb|EFT72573.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA1] gi|315103999|gb|EFT75975.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA2] gi|315106040|gb|EFT78016.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA1] gi|315109200|gb|EFT81176.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA2] gi|327325140|gb|EGE66946.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA3] gi|327325231|gb|EGE67036.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA2] gi|327325527|gb|EGE67326.1| 30S ribosomal protein S13 [Propionibacterium acnes HL103PA1] gi|327332740|gb|EGE74474.1| 30S ribosomal protein S13 [Propionibacterium acnes HL097PA1] gi|327444031|gb|EGE90685.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA1] gi|327449341|gb|EGE95995.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA2] gi|327449431|gb|EGE96085.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA2] gi|327451453|gb|EGE98107.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA3] gi|327451572|gb|EGE98226.1| 30S ribosomal protein S13 [Propionibacterium acnes HL092PA1] gi|327451859|gb|EGE98513.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA2] gi|328752073|gb|EGF65689.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA1] gi|328755529|gb|EGF69145.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA2] gi|328756314|gb|EGF69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL020PA1] gi|328761352|gb|EGF74879.1| 30S ribosomal protein S13 [Propionibacterium acnes HL099PA1] Length = 123 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 57/110 (51%), Positives = 78/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I + RVH+L + +++ +R I Sbjct: 1 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR Sbjct: 61 EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110 >gi|110004252|emb|CAK98590.1| 30s ribosomal protein s13 [Spiroplasma citri] Length = 121 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KR V AL YI+GIG SQ I + I + RV L E E+ IR I Sbjct: 1 MARIGGVDIPNDKRAVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ + NART K Sbjct: 61 AK-LKIEGDLRREVALNIKRLMEIGSYRGMRHRKSLPARGQSSKQNARTVK 110 >gi|404593|gb|AAD10542.1| uncertain [Mycoplasma genitalium] Length = 117 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 +IP KR+ AL YI GIG S++ I K I P++RV L E E++ IR A Y++E Sbjct: 1 DIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA-ASGYKIE 59 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 GDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK Sbjct: 60 GDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRK 103 >gi|78189783|ref|YP_380121.1| 30S ribosomal protein S13 [Chlorobium chlorochromatii CaD3] gi|91207694|sp|Q3APJ7|RS13_CHLCH RecName: Full=30S ribosomal protein S13 gi|78171982|gb|ABB29078.1| SSU ribosomal protein S13P [Chlorobium chlorochromatii CaD3] Length = 125 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL +++GIG S+++I K I ++++ +L + E IR+ I + Sbjct: 2 RLAGVNLPLNKHAVIALTHVYGIGRTSAENILRKAGIAYDKKISELSDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 62 EYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110 >gi|227538695|ref|ZP_03968744.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300] gi|300770228|ref|ZP_07080107.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33861] gi|227241614|gb|EEI91629.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300] gi|300762704|gb|EFK59521.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33861] Length = 125 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++ I +K I + +V + ++ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGRQTAAYILDKAGISEDVKVQDWNDDQLAAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG LR V +NIKRLMD+GCYRGLRHR+ LPVRGQRT N RTRK Sbjct: 61 NDELKVEGALRSEVQLNIKRLMDIGCYRGLRHRKHLPVRGQRTKNNTRTRK 111 >gi|21672748|ref|NP_660815.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009164|sp|Q8K971|RS13_BUCAP RecName: Full=30S ribosomal protein S13 gi|21623394|gb|AAM68026.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 118 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K + AL I+GIG K S+ IC I ++ L E E+ +R+ + Sbjct: 1 MARIAGINIPEHKHALIALTSIYGIGKKRSKIICFNANIAENSKISDLKEEEIELLRENV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + Y EGDLRR +NIKRL+DL CYRGLRHRR LPVRGQRT TNART Sbjct: 61 AK-YVTEGDLRREKTLNIKRLIDLNCYRGLRHRRSLPVRGQRTKTNART 108 >gi|330997341|ref|ZP_08321192.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841] gi|329570715|gb|EGG52431.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841] Length = 126 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 73/109 (66%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG SS I K + + +V + + IR I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILAKAGVDKDIKVKDWTDEQASNIRAVIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EYKVEGDLRAEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112 >gi|21230385|ref|NP_636302.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21903472|sp|Q9Z3F0|RS13_XANCP RecName: Full=30S ribosomal protein S13 gi|21111942|gb|AAM40226.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 118 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRG P+RGQRT TNARTRK Sbjct: 61 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGHPLRGQRTRTNARTRK 110 >gi|313836057|gb|EFS73771.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA2] gi|314929593|gb|EFS93424.1| 30S ribosomal protein S13 [Propionibacterium acnes HL044PA1] gi|314970520|gb|EFT14618.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA3] gi|328906198|gb|EGG25973.1| 30S ribosomal protein S13 [Propionibacterium sp. P08] Length = 123 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 57/110 (51%), Positives = 77/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I + RVH+L + +++ +R I Sbjct: 1 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKTTGISGDLRVHELTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR Sbjct: 61 EASYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110 >gi|563203|gb|AAB17598.1| ribosomal protein S13 [Mycobacterium bovis] gi|1589487|prf||2211287D ribosomal protein S13 Length = 123 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MDRLVGVDLPRHKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111 >gi|184155967|ref|YP_001844307.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956] gi|227515511|ref|ZP_03945560.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931] gi|260662776|ref|ZP_05863670.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN] gi|226712752|sp|B2GDU5|RS13_LACF3 RecName: Full=30S ribosomal protein S13 gi|183227311|dbj|BAG27827.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956] gi|227086124|gb|EEI21436.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931] gi|260552857|gb|EEX25856.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN] Length = 121 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILANAGVSEDIRVRDLTPDQEEKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q +VEGDLRR V++NIKRL ++G YRG+RHR GLPVRGQ T NARTRK Sbjct: 61 DQ-IKVEGDLRREVSLNIKRLQEIGSYRGMRHRHGLPVRGQHTKNNARTRK 110 >gi|91786408|ref|YP_547360.1| 30S ribosomal protein S13 [Polaromonas sp. JS666] gi|123165434|sp|Q12G80|RS13_POLSJ RecName: Full=30S ribosomal protein S13 gi|91695633|gb|ABE42462.1| SSU ribosomal protein S13P [Polaromonas sp. JS666] Length = 121 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEACDIAYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K A Sbjct: 61 AL-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] Length = 136 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 12 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 72 EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 122 >gi|302524018|ref|ZP_07276360.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4] gi|302432913|gb|EFL04729.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4] Length = 126 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 82/111 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + + RV L + ++++++ I Sbjct: 1 MARLAGVDLPREKRLEIALTYIYGIGRTRSKQMIAAAELNADTRVKDLSDEDLVKLKDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++++VEGDLRR V +I+R +++G Y+GLR RRGLPVRGQRT TNARTRK Sbjct: 61 DENFKVEGDLRREVNADIRRKIEIGTYQGLRWRRGLPVRGQRTKTNARTRK 111 >gi|213962874|ref|ZP_03391134.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno] gi|213954531|gb|EEB65853.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno] Length = 124 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEISRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK Sbjct: 61 -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110 >gi|118616622|ref|YP_904954.1| 30S ribosomal protein S13 [Mycobacterium ulcerans Agy99] gi|183981107|ref|YP_001849398.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M] gi|158706253|sp|A0PMB4|RS13_MYCUA RecName: Full=30S ribosomal protein S13 gi|226712767|sp|B2HCX1|RS13_MYCMM RecName: Full=30S ribosomal protein S13 gi|118568732|gb|ABL03483.1| 30S ribosomal protein S13, RpsM [Mycobacterium ulcerans Agy99] gi|183174433|gb|ACC39543.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M] Length = 124 Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G S +I I R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + ++EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|310779571|ref|YP_003967904.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926] gi|309748894|gb|ADO83556.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926] Length = 118 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG +SQ + + + RV L E E+ ++R AI Sbjct: 1 MARIAGVDIPRNKRIEIALTYIYGIGKSTSQKVLKEAGVDFNTRVKDLTEEELNKVR-AI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ++ TNART K Sbjct: 60 IDTVKVEGDLRKDVRLSVKRLMDIRCYRGLRHKMNLPVRGQKSKTNARTVK 110 >gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis L2-32] gi|162229911|ref|YP_909208.2| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] gi|171741250|ref|ZP_02917057.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC 27678] gi|212716588|ref|ZP_03324716.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM 16992] gi|224283733|ref|ZP_03647055.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] gi|225351021|ref|ZP_03742044.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium pseudocatenulatum DSM 20438] gi|283455390|ref|YP_003359954.1| 30S ribosomal protein S13P [Bifidobacterium dentium Bd1] gi|306823544|ref|ZP_07456919.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679] gi|309802871|ref|ZP_07696972.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022] gi|310288000|ref|YP_003939259.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17] gi|311064873|ref|YP_003971599.1| 30S ribosomal protein S13P RpsM [Bifidobacterium bifidum PRL2010] gi|313140889|ref|ZP_07803082.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] gi|158706364|sp|A1A093|RS13_BIFAA RecName: Full=30S ribosomal protein S13 gi|154084634|gb|EDN83679.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis L2-32] gi|171276864|gb|EDT44525.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC 27678] gi|212660292|gb|EEB20867.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM 16992] gi|225158477|gb|EEG71719.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium pseudocatenulatum DSM 20438] gi|283102024|gb|ADB09130.1| rpsM SSU ribosomal protein S13P [Bifidobacterium dentium Bd1] gi|304553251|gb|EFM41163.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679] gi|308220338|gb|EFO76649.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022] gi|309251937|gb|ADO53685.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17] gi|310867193|gb|ADP36562.1| RpsM SSU ribosomal protein S13P [Bifidobacterium bifidum PRL2010] gi|313133399|gb|EFR51016.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] Length = 125 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|238025955|ref|YP_002910186.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1] gi|237875149|gb|ACR27482.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1] Length = 121 Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVDFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|163786167|ref|ZP_02180615.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1] gi|159878027|gb|EDP72083.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1] Length = 124 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V +L YI+G+G +++I + +V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVISLTYIYGVGRSRAKEILATAKVDESTKVQDWSDDEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR MNIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GT-FKIEGELRSETQMNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110 >gi|330815272|ref|YP_004358977.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3] gi|327367665|gb|AEA59021.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3] Length = 121 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVEFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110 >gi|271962661|ref|YP_003336857.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021] gi|270505836|gb|ACZ84114.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021] Length = 126 Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/110 (50%), Positives = 78/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG + + + + RVHQL + E++ +R I Sbjct: 1 MARLVGVDLPRDKRLEIALTYIFGIGRTRALETLKATGVNGDLRVHQLTDEELVPLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y++EGDLRR V +I+R +++ CY+G+RHRRGLPV GQRT TNARTR Sbjct: 61 EANYKIEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVHGQRTQTNARTR 110 >gi|28377856|ref|NP_784748.1| 30S ribosomal protein S13 [Lactobacillus plantarum WCFS1] gi|254556041|ref|YP_003062458.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1] gi|300767844|ref|ZP_07077754.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180034|ref|YP_003924162.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ST-III] gi|32363297|sp|Q88XW2|RS13_LACPL RecName: Full=30S ribosomal protein S13 gi|28270689|emb|CAD63595.1| ribosomal protein S13 [Lactobacillus plantarum WCFS1] gi|254044968|gb|ACT61761.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1] gi|300494829|gb|EFK29987.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045525|gb|ADN98068.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 121 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KR+V L YI+GIG S+Q I + + + RV L + +IR A+ Sbjct: 1 MARIEGIDLPRDKRIVIGLTYIYGIGNTSAQKILAEAGVSEDVRVRDLTPDQEDKIR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+ EGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 60 VDGYKTEGDLRREVSLNIKLLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110 >gi|262383851|ref|ZP_06076987.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B] gi|301312009|ref|ZP_07217931.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3] gi|262294749|gb|EEY82681.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B] gi|300830111|gb|EFK60759.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3] Length = 126 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 54/109 (49%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG +++ + +K + + +V + + ++R+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREVIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPLRGQSTKNNARTRK 112 >gi|220906741|ref|YP_002482052.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7425] gi|254811145|sp|B8HMS6|RS13_CYAP4 RecName: Full=30S ribosomal protein S13 gi|219863352|gb|ACL43691.1| ribosomal protein S13 [Cyanothece sp. PCC 7425] Length = 126 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ I + + P+ R+ +L ++++ +R A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSQHILAETGVNPDTRIRELTDADISALRTAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E YQVEGDLRR MNIKRL D+GCYRG RHR GLPVRGQ Sbjct: 61 EA-YQVEGDLRRLENMNIKRLQDIGCYRGRRHRMGLPVRGQ 100 >gi|323144986|ref|ZP_08079546.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066] gi|322415265|gb|EFY06039.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066] Length = 128 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +ARIAG+N+P K V AL ++GIG +++I + + L E+ V +IR+ + Sbjct: 11 VARIAGINVPDHKIAVIALQSVYGIGPTRARNILAAAGVAESAKFKDLDEASVDKIREEV 70 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR ++MNIKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 71 AK-YTVEGDLRREISMNIKRLVDLGSYRGIRHRRGLPVRGQRTKTNARTRK 120 >gi|227501158|ref|ZP_03931207.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098] gi|227216743|gb|EEI82144.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098] Length = 114 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG +S +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTSNEILKNAGINPDTKMKDLTEEELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y +EGDLRR ++MNI+ L ++G YRGLRH+ LPVRGQ T NARTRK Sbjct: 61 -NNYHIEGDLRRDISMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNARTRK 110 >gi|319778702|ref|YP_004129615.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9] gi|317108726|gb|ADU91472.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9] Length = 121 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG S+ IC + ++V L + E+ +IR+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIYGIGRSRSRLICEAAGVETTKKVKDLTDDELEKIREKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR V ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 -GEFTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRK 110 >gi|150008961|ref|YP_001303704.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503] gi|255014791|ref|ZP_05286917.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_7] gi|256841038|ref|ZP_05546545.1| 30S ribosomal protein S13 [Parabacteroides sp. D13] gi|298375806|ref|ZP_06985762.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19] gi|158706340|sp|A6LEG8|RS13_PARD8 RecName: Full=30S ribosomal protein S13 gi|149937385|gb|ABR44082.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503] gi|256736881|gb|EEU50208.1| 30S ribosomal protein S13 [Parabacteroides sp. D13] gi|298266843|gb|EFI08500.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19] Length = 126 Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 54/109 (49%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG +++ + +K + + +V + + ++R+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREVIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRVGLPLRGQSTKNNARTRK 112 >gi|330718949|ref|ZP_08313549.1| 30S ribosomal protein S13 [Leuconostoc fallax KCTC 3537] Length = 123 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR A+ Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLTEAKVSEDVRVRDLTSDQEDAIRAAV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + Q+EGDLRR ++++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DQLNLQLEGDLRRKISLDIKGLQEIAAYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|33519680|ref|NP_878512.1| 30S ribosomal protein S13 [Candidatus Blochmannia floridanus] gi|81666638|sp|Q7VQC6|RS13_BLOFL RecName: Full=30S ribosomal protein S13 gi|33517343|emb|CAD83728.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia floridanus] Length = 118 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K V AL I+GIG ++ IC + + ++ QL + + ++R I Sbjct: 1 MVRIAGVNVPDRKHAVIALMSIYGIGRSRAKLICLSIGVDEYTKIGQLSDVYIDKMRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 AK-YVVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTRK 110 >gi|257463988|ref|ZP_05628373.1| 30S ribosomal protein S13 [Fusobacterium sp. D12] gi|317061510|ref|ZP_07925995.1| SSU ribosomal protein S13P [Fusobacterium sp. D12] gi|313687186|gb|EFS24021.1| SSU ribosomal protein S13P [Fusobacterium sp. D12] Length = 118 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+GIG +SQ + + + + RV L + E+ +IR+ I Sbjct: 1 MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTDDEINKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K Sbjct: 61 -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110 >gi|296130464|ref|YP_003637714.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109] gi|296022279|gb|ADG75515.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109] Length = 126 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G + I P+ RV L +++++ +R + Sbjct: 1 MARLIGVDLPRDKRVEVALTYIFGVGRTRAHQALAATGISPDVRVKDLDDAQLVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +++EGDLRR +A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 DGSFKLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111 >gi|257067036|ref|YP_003153292.1| 30S ribosomal protein S13 [Anaerococcus prevotii DSM 20548] gi|256798916|gb|ACV29571.1| ribosomal protein S13 [Anaerococcus prevotii DSM 20548] Length = 114 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y +EGDLRR V+MNI+ L ++G YRGLRH+ LPVRGQ T NARTRK Sbjct: 61 -NNYHIEGDLRREVSMNIRSLREIGSYRGLRHKNNLPVRGQNTKNNARTRK 110 >gi|299830618|ref|YP_003735066.1| 30S ribosomal protein S13 [Durinskia baltica] gi|297384982|gb|ADI40281.1| 30S ribosomal protein S13 [Durinskia baltica] Length = 123 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ AL YIHGIG +++ + I + RV+ L + + +RQ I Sbjct: 1 MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKKLIELAEIDSDLRVYDLTTEQAVALRQTI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ESSDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|228472158|ref|ZP_04056924.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624] gi|228276361|gb|EEK15085.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624] Length = 124 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I + + +V + ++ +IR+A+ Sbjct: 1 MARIAGIDLPKHKRGVIGLTYIFGIGRSRAKEILKTAQVDEDIKVSDWNDEQITRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK Sbjct: 61 SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRK 110 >gi|255038113|ref|YP_003088734.1| 30S ribosomal protein S13 [Dyadobacter fermentans DSM 18053] gi|254950869|gb|ACT95569.1| ribosomal protein S13 [Dyadobacter fermentans DSM 18053] Length = 125 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR +L YI GIG S++ I K + ++V + E IR I Sbjct: 1 MARIAGVDIPDRKRGEISLTYIFGIGRSSAKKILEKAGVDLNKKVIDWTDDESGAIRGVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y+VEG L+ V ++IKRLMD+ CYRGLRHR+GLP+RGQRT N+RTRK Sbjct: 61 AGEYKVEGALKSEVQLSIKRLMDIACYRGLRHRKGLPLRGQRTKNNSRTRK 111 >gi|158334434|ref|YP_001515606.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017] gi|189040488|sp|B0C432|RS13_ACAM1 RecName: Full=30S ribosomal protein S13 gi|158304675|gb|ABW26292.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017] Length = 126 Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SQ+I + P+ RV +L + +V +R A+ Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGLTRSQEILAATGVNPDTRVRELGDQDVAALRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 YQVEGDLRR +MN+KRLMD+G YRG RHR GLPVRGQ Sbjct: 61 -AGYQVEGDLRRWESMNVKRLMDIGSYRGRRHRAGLPVRGQ 100 >gi|221105230|ref|XP_002170878.1| PREDICTED: similar to ribosomal protein S13 [Hydra magnipapillata] Length = 124 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + ++ K + +++V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGMGRSRAIEVLEKAKVSQDKKVLDWNDDEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++EG+LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SS-FKIEGELRSEITLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|325479172|gb|EGC82269.1| 30S ribosomal protein S13 [Anaerococcus prevotii ACS-065-V-Col13] Length = 114 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y +EGDLRR V+MNI+ L ++G YRGLRH+ LPVRGQ T NA+TRK Sbjct: 61 -NNYNIEGDLRREVSMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNAKTRK 110 >gi|229818216|ref|ZP_04448498.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM 20098] gi|229784467|gb|EEP20581.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM 20098] Length = 125 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 77/111 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G ++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKQTLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 61 EANFKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111 >gi|312795800|ref|YP_004028722.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454] gi|312167575|emb|CBW74578.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454] Length = 121 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I GIG ++ IC + ++V +L ++++ ++R + Sbjct: 1 MARIAGVNIPVHKHTVIGLQAILGIGASRARLICVAAGVDTSKKVKELTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V MNIKR MD+GCY G+RHR+GLP+RGQRT TNARTRK Sbjct: 61 AK-FVVEGDLRREVTMNIKRKMDIGCYEGVRHRKGLPMRGQRTRTNARTRK 110 >gi|33594504|ref|NP_882148.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I] gi|33594775|ref|NP_882418.1| 30S ribosomal protein S13 [Bordetella parapertussis 12822] gi|33599047|ref|NP_886607.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50] gi|81424286|sp|Q7VTA8|RS13_BORPE RecName: Full=30S ribosomal protein S13 gi|81425890|sp|Q7W2D2|RS13_BORPA RecName: Full=30S ribosomal protein S13 gi|81432513|sp|Q7WRA0|RS13_BORBR RecName: Full=30S ribosomal protein S13 gi|33564580|emb|CAE43896.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I] gi|33564851|emb|CAE39795.1| 30S ribosomal protein S13 [Bordetella parapertussis] gi|33575093|emb|CAE30556.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50] Length = 121 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P ++V L ++E+ +IR+ I Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAAGVPVTKKVKDLTDAELERIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GV-FAVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|89891133|ref|ZP_01202641.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7] gi|89516777|gb|EAS19436.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7] Length = 124 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR +L YI+GIG ++ + + +++V + + E+ +IR AI Sbjct: 1 MARIAGVDIPKNKRGEVSLTYIYGIGRNRAKQVLIDTGVGLDKKVSEWNDDEIGKIRSAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GE-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|15674052|ref|NP_268227.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403] gi|116513029|ref|YP_811936.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris SK11] gi|125625117|ref|YP_001033600.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris MG1363] gi|281492734|ref|YP_003354714.1| 50S ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147] gi|61236823|sp|P0A4A9|RS13_LACLA RecName: Full=30S ribosomal protein S13 gi|122939923|sp|Q02W49|RS13_LACLS RecName: Full=30S ribosomal protein S13 gi|158706241|sp|A2RNM9|RS13_LACLM RecName: Full=30S ribosomal protein S13 gi|12725122|gb|AAK06168.1|AE006436_17 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403] gi|116108683|gb|ABJ73823.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. cremoris SK11] gi|124493925|emb|CAL98920.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris MG1363] gi|281376386|gb|ADA65872.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147] gi|300071925|gb|ADJ61325.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris NZ9000] gi|326407606|gb|ADZ64677.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis CV56] Length = 121 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR AGV+IP KR+V +L Y+ G+G ++S+ + + + R L + IR+ + Sbjct: 1 MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSDQEDAIRREL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++EGDLRR V++NIKRLM++G YRG+RHRRGLP RGQ T NARTRK K + Sbjct: 61 D-GLKLEGDLRREVSLNIKRLMEIGSYRGMRHRRGLPTRGQNTKNNARTRKGPAKSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15617096|ref|NP_240309.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681848|ref|YP_002468234.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682403|ref|YP_002468787.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471553|ref|ZP_05635552.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387083|sp|P57569|RS13_BUCAI RecName: Full=30S ribosomal protein S13 gi|254811134|sp|B8D9S5|RS13_BUCA5 RecName: Full=30S ribosomal protein S13 gi|254811135|sp|B8D827|RS13_BUCAT RecName: Full=30S ribosomal protein S13 gi|25294711|pir||C84988 30S ribosomal protein S13 [imported] - Buchnera sp. (strain APS) gi|10039161|dbj|BAB13195.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622136|gb|ACL30292.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624691|gb|ACL30846.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086224|gb|ADP66306.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086801|gb|ADP66882.1| 30S ribosomal protein S13 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087388|gb|ADP67468.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087885|gb|ADP67964.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 118 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K + AL I+GIG K S+ IC+ IP ++ L E ++ +R + Sbjct: 1 MARIAGINIPENKHTLIALTAIYGIGKKRSKFICSIANIPEHSKIVDLNEEQIDLLRTHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR +NIKRL+DL CYRGLRHRR LPV GQRT TNART K Sbjct: 61 AK-YVIEGDLRRERTLNIKRLIDLSCYRGLRHRRSLPVHGQRTKTNARTCK 110 >gi|256370800|ref|YP_003108625.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri SMDSEM] gi|256009592|gb|ACU52952.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri SMDSEM] Length = 134 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 53/110 (48%), Positives = 75/110 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA I+G+ IP+ KR + AL YI GIG +S+ I N I ++V ++E+ +IR+ I Sbjct: 1 MAIISGIEIPKNKRGLIALTYIFGIGISTSKKIFNNTGIDKNKKVSNWTDNEIKKIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + EG+LR + ++IKR+MD+GCYRG+RHR GLPVRGQ+T N RTR Sbjct: 61 SDKIKTEGELRLEIQLDIKRIMDIGCYRGIRHRLGLPVRGQKTKKNCRTR 110 >gi|34541517|ref|NP_905996.1| 30S ribosomal protein S13 [Porphyromonas gingivalis W83] gi|188995708|ref|YP_001929960.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277] gi|81416929|sp|Q7MTN7|RS13_PORGI RecName: Full=30S ribosomal protein S13 gi|226712775|sp|B2RLW8|RS13_PORG3 RecName: Full=30S ribosomal protein S13 gi|34397834|gb|AAQ66895.1| ribosomal protein S13 [Porphyromonas gingivalis W83] gi|188595388|dbj|BAG34363.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277] Length = 126 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/109 (52%), Positives = 73/109 (66%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG S+ I +K + + +V + + IR I Sbjct: 4 RIVGVDLPQNKRGFIALTYIYGIGRSSAITILDKAGVDRDIKVKDWSDDQAAAIRDVIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 GYKVEGDLRSEVQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112 >gi|15618538|ref|NP_224824.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae CWL029] gi|15836160|ref|NP_300684.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae J138] gi|16752412|ref|NP_444671.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae AR39] gi|33241985|ref|NP_876926.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae TW-183] gi|6831656|sp|Q9Z7S6|RS13_CHLPN RecName: Full=30S ribosomal protein S13 gi|4376926|gb|AAD18767.1| S13 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7189053|gb|AAF38002.1| ribosomal protein S13 [Chlamydophila pneumoniae AR39] gi|8979000|dbj|BAA98835.1| S13 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236495|gb|AAP98583.1| ribosomal protein S13 [Chlamydophila pneumoniae TW-183] gi|269302412|gb|ACZ32512.1| ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN] Length = 122 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S +I KL + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGSARSDEIIKKLKLDPEARASELTEEEVGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSEYTVEGDLRRRVQSDIKRLIAIHSYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|320526892|ref|ZP_08028082.1| 30S ribosomal protein S13 [Solobacterium moorei F0204] gi|320132860|gb|EFW25400.1| 30S ribosomal protein S13 [Solobacterium moorei F0204] Length = 121 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R AGV+IPR K + +L YI+GIG ++++I I R + L E++ IR+ I Sbjct: 1 MPRFAGVDIPRNKVIGVSLTYIYGIGPTTAKNILAACGIDENTRTNDLTEAQETAIREKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EGDLRR A++IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 DA-IKTEGDLRRDRALDIKRLMEIGSYRGIRHRRGLPVRGQRTRTNARTRK 110 >gi|46446065|ref|YP_007430.1| 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila UWE25] gi|81627551|sp|Q6ME44|RS13_PARUW RecName: Full=30S ribosomal protein S13 gi|46399706|emb|CAF23155.1| probable 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila UWE25] Length = 122 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G++IP KR+ +L Y++GIG S +I KL + P R H+L + ++ ++ + Sbjct: 1 MPRVIGIDIPDNKRLEISLTYLYGIGRHLSNEIIVKLGLDPNMRAHKLTQDDLARLNGLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Y VEGDLRR V NIKRL+ + YRG+RHR GLPVRGQRT TN+RTRK Sbjct: 61 TSEYMVEGDLRRQVQNNIKRLISIHSYRGMRHRLGLPVRGQRTKTNSRTRK 111 >gi|37523143|ref|NP_926520.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421] gi|81708852|sp|Q7NFF2|RS13_GLOVI RecName: Full=30S ribosomal protein S13 gi|35214146|dbj|BAC91515.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421] Length = 127 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 61/101 (60%), Positives = 70/101 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI GIG + I I P RV +L + +V +R+ I Sbjct: 1 MARIAGVDIPREKRVEIALTYIFGIGPSRATQILLSTGINPNLRVRELTDVQVSLLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 EQ YQVEGDLRR +NIKRLMD+GC RG RHR GLPVRGQ Sbjct: 61 EQKYQVEGDLRRFENINIKRLMDIGCLRGRRHRLGLPVRGQ 101 >gi|257069482|ref|YP_003155737.1| 30S ribosomal protein S13P [Brachybacterium faecium DSM 4810] gi|256560300|gb|ACU86147.1| SSU ribosomal protein S13P [Brachybacterium faecium DSM 4810] Length = 124 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + + + RV ++ + + +++R + Sbjct: 1 MARLVGVDLPREKRIEVALTYIFGVGRSRALETLAATGVSGDLRVREVSDEDFVKLRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK Sbjct: 61 EANYMVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111 >gi|332042698|gb|EGI78898.1| 30S ribosomal protein S13 [Lacinutrix algicola 5H-3-7-4] Length = 123 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI+G+G +Q+I + +V + ++ IR+ + Sbjct: 1 MARIAGVDIPKNKRGVIALTYIYGVGRSRAQEILATAKVDESIKVQDWTDDQIGAIRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GT-FTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|62184756|ref|YP_219541.1| 30S ribosomal protein S13 [Chlamydophila abortus S26/3] gi|329942430|ref|ZP_08291240.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10] gi|81313064|sp|Q5L701|RS13_CHLAB RecName: Full=30S ribosomal protein S13 gi|62147823|emb|CAH63569.1| putative 30s ribosomal protein s13 [Chlamydophila abortus S26/3] gi|313847667|emb|CBY16655.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1] gi|325506969|gb|ADZ18607.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC] gi|328815340|gb|EGF85328.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10] gi|328914304|gb|AEB55137.1| ribosomal protein S13p/S18e [Chlamydophila psittaci 6BC] Length = 122 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I KL + PE R +L E E+ ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAAELTEEEIGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|229496152|ref|ZP_04389872.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406] gi|229316730|gb|EEN82643.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406] Length = 126 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 73/109 (66%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI GIG + I +K I +V + + QIR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIFGIGRSRAAYILDKAGIDRNIKVKDWSDDQAAQIREIIGS 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 EFKVEGDLRSEVQLNIKRLMDIGCYRGIRHRAGLPVRGQSTKNNARTRK 112 >gi|84494747|ref|ZP_00993866.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649] gi|84384240|gb|EAQ00120.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649] Length = 125 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 75/111 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G SSQ I P RV L + ++ +R I Sbjct: 1 MARLQGVDLPREKRVEIALTYIFGVGRSSSQKALAATGIDPNVRVKDLTDVNLVALRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++ +VEGDLRR V +I+R +++G Y+G RHR GLPV GQRT TNARTRK Sbjct: 61 DENLKVEGDLRREVQADIRRKVEIGSYQGRRHRSGLPVHGQRTKTNARTRK 111 >gi|116617352|ref|YP_817723.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431318|ref|ZP_03913371.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122272447|sp|Q03ZM2|RS13_LEUMM RecName: Full=30S ribosomal protein S13 gi|116096199|gb|ABJ61350.1| SSU ribosomal protein S13P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352911|gb|EEJ43084.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 123 Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLAEAGVSEDVRVRDLTSDQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172] gi|227236500|gb|EEI86515.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172] Length = 114 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+G+G ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGVGRATANEILKNTGINPDTKMKDLTEDELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR ++NIK L + G YRGLRH+ GLPVRGQ T NARTRK Sbjct: 61 DH-YTIEGDLRRETSLNIKALRENGSYRGLRHKNGLPVRGQNTKNNARTRK 110 >gi|163859248|ref|YP_001633546.1| 30S ribosomal protein S13 [Bordetella petrii DSM 12804] gi|226712701|sp|A9IHS0|RS13_BORPD RecName: Full=30S ribosomal protein S13 gi|163262976|emb|CAP45279.1| 30S ribosomal protein S13 [Bordetella petrii] Length = 121 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPLSKKVKDLTDAELERIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|323340397|ref|ZP_08080654.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644] gi|323092173|gb|EFZ34788.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644] Length = 121 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + + RV L + +IR A+ Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGDTTAKKILAEAGVSEDVRVRDLTSDQEDKIR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +Y+VEGDLRR V++NIKRL ++G YRGLRHRR LP RGQ T NART Sbjct: 60 VDNYKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPSRGQNTKNNART 108 >gi|51209924|ref|YP_063588.1| ribosomal protein S13 [Gracilaria tenuistipitata var. liui] gi|68053118|sp|Q6B8X2|RR13_GRATL RecName: Full=30S ribosomal protein S13, chloroplastic gi|50657678|gb|AAT79663.1| 30S ribosomal protein S13 [Gracilaria tenuistipitata var. liui] Length = 126 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV++P+ KR+ +L YI+GIG + +I +L I + +L + +++ IRQ + Sbjct: 1 MTRIVGVDLPKNKRIEISLTYIYGIGKSKAIEILEQLKINRNIKTKELKDEQIVLIRQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 YQ+EGDL+R +MNIKRLM + YRG RH+ GLP+RGQ T TNART++ K + Sbjct: 61 NNSYQIEGDLKRVESMNIKRLMTISSYRGKRHQLGLPLRGQNTRTNARTKRGIKKTMAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|88608326|ref|YP_506178.1| 30S ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama] gi|123492152|sp|Q2GEB8|RS13_NEOSM RecName: Full=30S ribosomal protein S13 gi|88600495|gb|ABD45963.1| ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama] Length = 123 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R GVN+P K VV AL Y++GIG +++ IC+ LAI ++ L + ++ I I+ Sbjct: 2 RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 D EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRK 110 >gi|326692214|ref|ZP_08229219.1| 30S ribosomal protein S13 [Leuconostoc argentinum KCTC 3773] Length = 123 Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q I + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLTADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKALQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|254796668|ref|YP_003081504.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois] gi|254589916|gb|ACT69278.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois] Length = 123 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 76/109 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R GVN+P K VV AL Y++GIG +++ IC+ LAI ++ L + ++ I I+ Sbjct: 2 RFLGVNLPDNKAVVVALTYVYGIGLPTARKICSSLAIDGSAKLPDLGQEQLNSIMAYIKN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 D EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRK 110 >gi|212550429|ref|YP_002308746.1| 30S ribosomal protein S13 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226712690|sp|B6YQ63|RS13_AZOPC RecName: Full=30S ribosomal protein S13 gi|212548667|dbj|BAG83335.1| 30S ribosomal protein S13 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 126 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG S I + I + R+ + +V +R+ I + Sbjct: 4 RILGVDLPQNKRGEIALTYIYGIGCGLSSKILTEAGIDRDTRIKDWTDVQVAAVREIISR 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEGDLR + +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 NFKVEGDLRSEIQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112 >gi|187251797|ref|YP_001876279.1| 30S ribosomal protein S13 [Elusimicrobium minutum Pei191] gi|226712735|sp|B2KEJ6|RS13_ELUMP RecName: Full=30S ribosomal protein S13 gi|186971957|gb|ACC98942.1| Ribosomal protein S13 [Elusimicrobium minutum Pei191] Length = 124 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 55/113 (48%), Positives = 82/113 (72%), Gaps = 2/113 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL--AIPPERRVHQLVESEVIQIRQ 58 MAR+AG+++P+ KR+ AL YI+GIG ++++D+ K I P RV L E++ + Sbjct: 1 MARVAGIDLPKNKRIDVALEYIYGIGKRNAKDVIAKANGQIDPTTRVKDLTEAQANLLNT 60 Query: 59 AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++++Y+VEG+LRR ++ NI+R +D G YRG RHR+ LPVRGQRT TN+RTRK Sbjct: 61 ILQKEYKVEGELRREISGNIQRYVDTGSYRGNRHRKRLPVRGQRTKTNSRTRK 113 >gi|71891996|ref|YP_277726.1| 30S ribosomal protein S13 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|91207689|sp|Q493I7|RS13_BLOPB RecName: Full=30S ribosomal protein S13 gi|71796102|gb|AAZ40853.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 121 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K V AL I+GIG ++ IC I ++ +L E + ++R A+ Sbjct: 1 MVRIAGVNVPDRKHAVVALMSIYGIGKSRARSICLNTGIDEHVQLCKLSEIHIDKLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNART K Sbjct: 61 DE-YIVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTCK 110 >gi|170017921|ref|YP_001728840.1| ribosomal protein S13 [Leuconostoc citreum KM20] gi|226712757|sp|B1MVZ2|RS13_LEUCK RecName: Full=30S ribosomal protein S13 gi|169804778|gb|ACA83396.1| Ribosomal protein S13 [Leuconostoc citreum KM20] Length = 123 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q I + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 [Bordetella avium 197N] gi|123515218|sp|Q2L248|RS13_BORA1 RecName: Full=30S ribosomal protein S13 gi|115421157|emb|CAJ47641.1| 30S ribosomal protein S13 [Bordetella avium 197N] Length = 121 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I G+G ++ IC +P ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGVGRTRARKICEAAGVPVTKKVKDLTDAELERIREHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|281357930|ref|ZP_06244415.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548] gi|281315588|gb|EFA99616.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548] Length = 131 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP KRV +L Y++G+G + +I K+ I P+ + L ++ I + + Sbjct: 1 MPRIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + D VEGDLRRT+A +I+RL + CYRG+RHRR LPVRGQRT TNARTRK Sbjct: 61 QDDLLVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQRTKTNARTRK 111 >gi|254509449|ref|ZP_05121527.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16] gi|219547622|gb|EED24669.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16] Length = 103 Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 1/94 (1%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + + Y VEGDLRR V+MN Sbjct: 3 ALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMN 61 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 62 IKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 95 >gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155] gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155] Length = 130 Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 78/111 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L YI+GIG ++ +I K I P++R +L ++++ I + + Sbjct: 1 MPRIMGVDIPTNKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVKLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y+VEGDLRR +A++++RL + CYRG RH+ LP RGQRT TNARTRK Sbjct: 61 DSSYEVEGDLRRQLALSVRRLQAVNCYRGRRHKHSLPCRGQRTKTNARTRK 111 >gi|317401571|gb|EFV82200.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans C54] Length = 121 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P +++V L ++E+ ++R+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLSDAELERVREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|29653612|ref|NP_819304.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 493] gi|32363225|sp|P59753|RS13_COXBU RecName: Full=30S ribosomal protein S13 gi|29540874|gb|AAO89818.1| SSU ribosomal protein S13P [Coxiella burnetii RSA 493] Length = 119 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP K AL I+GIG + +IC + I P +V L E+E+ +R + Sbjct: 3 ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK Sbjct: 63 K-FSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRK 111 >gi|298372564|ref|ZP_06982554.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058] gi|298275468|gb|EFI17019.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058] Length = 126 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 56/109 (51%), Positives = 75/109 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+AKR L YI+GIG +++ I ++ I +V + + +IR+ I Sbjct: 4 RIVGVDLPQAKRGEVGLTYIYGIGRSTARKILSEAGIDYNIKVQDWSDEQAGKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEG+LR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 64 KYRVEGELRSEVQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112 >gi|284929582|ref|YP_003422104.1| 30S ribosomal protein S13P [cyanobacterium UCYN-A] gi|284810026|gb|ADB95723.1| SSU ribosomal protein S13P [cyanobacterium UCYN-A] Length = 127 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 72/101 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y+ GIG SQ I + + P+ RV L + ++ +R I Sbjct: 1 MARISGVDLPRDKRIEIGLTYLFGIGLSRSQKILAETGVNPDIRVRDLSDEDLTSLRVYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 ++++Q+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 DENFQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|293602601|ref|ZP_06685044.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553] gi|311109579|ref|YP_003982432.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8] gi|292818973|gb|EFF78011.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553] gi|310764268|gb|ADP19717.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8] Length = 121 Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P +++V L ++E+ ++R+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLNDAELERVREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GL-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|313887064|ref|ZP_07820763.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica PR426713P-I] gi|312923475|gb|EFR34285.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica PR426713P-I] gi|332176609|gb|AEE12299.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica DSM 20707] Length = 126 Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 71/109 (65%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG S+ I + + +V + + IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQISS 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEGDLR +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 GYKVEGDLRSETQLNIKRLMDIGCYRGIRHRLGLPLRGQSTKNNARTRK 112 >gi|154706597|ref|YP_001425160.1| 30S ribosomal protein S13 [Coxiella burnetii Dugway 5J108-111] gi|161349360|ref|ZP_02096744.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177'] gi|161830195|ref|YP_001596207.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 331] gi|212213228|ref|YP_002304164.1| 30S ribosomal protein S13 [Coxiella burnetii CbuG_Q212] gi|212218096|ref|YP_002304883.1| 30S ribosomal protein S13 [Coxiella burnetii CbuK_Q154] gi|189040499|sp|A9KD09|RS13_COXBN RecName: Full=30S ribosomal protein S13 gi|189040500|sp|A9NAZ2|RS13_COXBR RecName: Full=30S ribosomal protein S13 gi|226712723|sp|B6J5F4|RS13_COXB1 RecName: Full=30S ribosomal protein S13 gi|226712724|sp|B6J241|RS13_COXB2 RecName: Full=30S ribosomal protein S13 gi|154355883|gb|ABS77345.1| SSU ribosomal protein S13P [Coxiella burnetii Dugway 5J108-111] gi|161762062|gb|ABX77704.1| ribosomal protein S13 [Coxiella burnetii RSA 331] gi|164601575|gb|EDQ95166.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177'] gi|212011638|gb|ACJ19019.1| SSU ribosomal protein S13P [Coxiella burnetii CbuG_Q212] gi|212012358|gb|ACJ19738.1| SSU ribosomal protein S13P [Coxiella burnetii CbuK_Q154] Length = 119 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP K AL I+GIG + +IC + I P +V L E+E+ +R + Sbjct: 3 ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK Sbjct: 63 K-FSVEGDLRRERSMDIKRKMDLGTYEGIRHRRGLPLRGQRTRSNARTRK 111 >gi|225630280|ref|YP_002727071.1| ribosomal protein S13 [Wolbachia sp. wRi] gi|225592261|gb|ACN95280.1| ribosomal protein S13 [Wolbachia sp. wRi] Length = 112 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 51/94 (54%), Positives = 72/94 (76%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG ++ IC+ + +RV +L + ++ +I I Q+Y +EG+LR+ VAMN Sbjct: 8 ALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFIRQNYVIEGELRKEVAMN 67 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK Sbjct: 68 IKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 101 >gi|189501630|ref|YP_001957347.1| 30S ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2] gi|226712687|sp|B3EUJ9|RS13_AMOA5 RecName: Full=30S ribosomal protein S13 gi|189497071|gb|ACE05618.1| ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2] Length = 126 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 72/111 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KR AL YI GIG S+ I + ++RV + E IR I Sbjct: 1 MARILGVDIPDNKRGEIALTYIFGIGRSSANQILAAAGVNKDKRVSSWTDEESQTIRTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y+VEG+L+ + +NIKRL+D+GCYRG RH GLPVRGQ T NARTRK Sbjct: 61 NENYKVEGELKSEIRLNIKRLVDIGCYRGRRHVLGLPVRGQSTKNNARTRK 111 >gi|15837775|ref|NP_298463.1| 30S ribosomal protein S13 [Xylella fastidiosa 9a5c] gi|32363422|sp|Q9PE55|RS13_XYLFA RecName: Full=30S ribosomal protein S13 gi|9106139|gb|AAF83983.1|AE003951_8 30S ribosomal protein S13 [Xylella fastidiosa 9a5c] Length = 118 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR V M IKRLMDL CYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRGLPLRGQRTRTNARTRK 110 >gi|28493497|ref|NP_787658.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist] gi|28572390|ref|NP_789170.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27] gi|54039357|sp|P66398|RS13_TROW8 RecName: Full=30S ribosomal protein S13 gi|54042127|sp|P66397|RS13_TROWT RecName: Full=30S ribosomal protein S13 gi|28410521|emb|CAD66907.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27] gi|28476539|gb|AAO44627.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist] Length = 124 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KRV L YI GIG S+ I + RV L + +++ +R I Sbjct: 1 MARVAGVDIPGNKRVEIGLTYICGIGPTRSRHALTAAGISFDTRVKDLTDDQLVALRAHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y++EGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K Sbjct: 61 QNSYRIEGDLRREVASDIRRKVEIGCYQGLRHRRGLPVNGQRTRTNARSSK 111 >gi|87306333|ref|ZP_01088480.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645] gi|87290512|gb|EAQ82399.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645] Length = 123 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/106 (51%), Positives = 77/106 (72%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 GV+IP K +L Y++G+G ++++++C K+ I ER+ +L E E+ +I +E +Y Sbjct: 2 GVDIPNDKPTWISLTYLYGVGPRTARELCVKVGISQERKAGELHEDELSRIAGLLETEYT 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEG LRR +A NI+RL + CYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 62 VEGPLRRQIAQNIQRLNRIVCYRGMRHRRGLPVRGQRTRTNARTRK 107 >gi|295698629|ref|YP_003603284.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA] gi|291157451|gb|ADD79896.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA] Length = 119 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 2/112 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+I K + A+ I+GIG K S+ IC + I P ++ L E EV ++R+ I Sbjct: 1 MVRIAGVHISENKHIWVAIQSIYGIGKKRSRSICFRTGIEPTSKISFLSEEEVDRLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG-LPVRGQRTHTNARTRK 111 + Y VEGDLRR ++IKRL+DLGCYRG+RH+ G LPVRGQRT TNARTRK Sbjct: 61 SR-YVVEGDLRREKNLSIKRLIDLGCYRGIRHKHGSLPVRGQRTKTNARTRK 111 >gi|134103234|ref|YP_001108895.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] gi|291007974|ref|ZP_06565947.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] gi|158706274|sp|A4FPJ5|RS13_SACEN RecName: Full=30S ribosomal protein S13 gi|133915857|emb|CAM05970.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] Length = 125 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I I + R L + ++ ++R+A+ Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILRATDISFDVRPKDLDDDQLAKLREAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E +Y++EGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK Sbjct: 61 E-NYRLEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 110 >gi|330723974|gb|AEC46344.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis MCLD] Length = 122 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV AL YI GIG S++I K I R L ES++ IR+ + Sbjct: 1 MARILNIEIPNDKRVVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +DY EGDLRR V +NIKR++++ Y+G+RHR+GLPVRGQ T NARTRK Sbjct: 60 AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRK 110 >gi|194477037|ref|YP_002049216.1| 30S ribosomal protein S13 [Paulinella chromatophora] gi|171192044|gb|ACB43006.1| 30S ribosomal protein S13 [Paulinella chromatophora] Length = 121 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+GIG ++Q I K + P+ RV L +SEV+ +R Sbjct: 1 MARIAGIDIPRDKRVEIALTYIYGIGLTTAQKILAKTGVNPDTRVKDLEDSEVLSLRNTT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E Y +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 ET-YTIEGDLRRQEGMALKRLQDIGCTRGRRHRMSLPVRGQ 100 >gi|15835410|ref|NP_297169.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg] gi|270285590|ref|ZP_06194984.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg] gi|270289600|ref|ZP_06195902.1| 30S ribosomal protein S13 [Chlamydia muridarum Weiss] gi|301336986|ref|ZP_07225188.1| 30S ribosomal protein S13 [Chlamydia muridarum MopnTet14] gi|14195202|sp|Q9PJN2|RS13_CHLMU RecName: Full=30S ribosomal protein S13 gi|7190824|gb|AAF39599.1| ribosomal protein S13 [Chlamydia muridarum Nigg] Length = 122 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|283794916|ref|YP_003359269.1| ribosomal protein S13 [Cryptomonas paramecium] gi|253981888|gb|ACT46805.1| ribosomal protein S13 [Cryptomonas paramecium] Length = 125 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P+ KRV AL Y++GIG +SQ I K + P R L + +V I++ I Sbjct: 1 MTRIAGVDLPKNKRVEIALTYMYGIGLSTSQLILAKSNVDPNVRCRDLTDHDVSSIKETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEG ++R +++IKRL+++ C RG RH LPVRGQRT TNARTRK K + Sbjct: 61 DKHYLVEGAIKRIESISIKRLIEINCTRGKRHTLNLPVRGQRTRTNARTRKGVKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300174008|ref|YP_003773174.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811] gi|299888387|emb|CBL92355.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811] Length = 123 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNNTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ D Q+EGDLRR V+++IK L ++ YRG+RHR+GLPV GQ T NARTRK K Sbjct: 61 DKLDLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVHGQNTKNNARTRKGPAKSIAG 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|312130525|ref|YP_003997865.1| ssu ribosomal protein s13p [Leadbetterella byssophila DSM 17132] gi|311907071|gb|ADQ17512.1| SSU ribosomal protein S13P [Leadbetterella byssophila DSM 17132] Length = 124 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 77/109 (70%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+GV+IP KR +L YI+GIG +++ I ++ + +++ + + E IR I Sbjct: 2 RISGVDIPDKKRGEISLTYIYGIGRSTAKHILSQANVSVDKKAGEWSDDEANAIRAIISN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +++VEG LR V ++IKRLMD+GCYRGLRHR+GLP+RGQ+T N+RTRK Sbjct: 62 EFKVEGALRSEVQLSIKRLMDIGCYRGLRHRKGLPLRGQKTKNNSRTRK 110 >gi|12751544|ref|NP_043597.2| ribosomal protein S13 [Odontella sinensis] gi|32363503|sp|P49501|RR13_ODOSI RecName: Full=30S ribosomal protein S13, chloroplastic gi|13620208|emb|CAA91629.2| 30S ribosomal protein S13 [Odontella sinensis] Length = 123 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YIHGIG S++ I I PE R L + I +R + Sbjct: 1 MVRLIGVDLPRNKRIAYALTYIHGIGITSARKIIELAEISPETRTDDLTTEQTIALRDQL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E D +EGDLR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ESIDLNLEGDLRCFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|256825861|ref|YP_003149821.1| 30S ribosomal protein S13P [Kytococcus sedentarius DSM 20547] gi|256689254|gb|ACV07056.1| SSU ribosomal protein S13P [Kytococcus sedentarius DSM 20547] Length = 123 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV L YI G+G + I RV L + +++ +R + Sbjct: 1 MARLIGVDLPRDKRVEIGLTYIFGVGRTRALQAVEACGIDRSTRVKDLNDEQLVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E ++Q+EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 61 EGNFQLEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111 >gi|15605238|ref|NP_220024.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/UW-3/CX] gi|76789246|ref|YP_328332.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/HAR-13] gi|237802938|ref|YP_002888132.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/Jali20/OT] gi|237804860|ref|YP_002889014.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/TZ1A828/OT] gi|255311327|ref|ZP_05353897.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276] gi|255317628|ref|ZP_05358874.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276s] gi|91207695|sp|Q3KLI8|RS13_CHLTA RecName: Full=30S ribosomal protein S13 gi|290463296|sp|P0CE04|RS13_CHLTR RecName: Full=30S ribosomal protein S13 gi|3328946|gb|AAC68110.1| S13 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167776|gb|AAX50784.1| SSU ribosomal protein S13P [Chlamydia trachomatis A/HAR-13] gi|231273160|emb|CAX10073.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/TZ1A828/OT] gi|231274172|emb|CAX10966.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/Jali20/OT] gi|296436042|gb|ADH18216.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768] gi|296436970|gb|ADH19140.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222] gi|296437903|gb|ADH20064.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074] gi|297140403|gb|ADH97161.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301] gi|297748639|gb|ADI51185.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-EC] gi|297749519|gb|ADI52197.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-LC] Length = 122 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|166154724|ref|YP_001654842.1| 30S ribosomal protein S13 [Chlamydia trachomatis 434/Bu] gi|166155599|ref|YP_001653854.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335998|ref|ZP_07224242.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2tet1] gi|226712714|sp|B0B883|RS13_CHLT2 RecName: Full=30S ribosomal protein S13 gi|226712716|sp|B0BCE8|RS13_CHLTB RecName: Full=30S ribosomal protein S13 gi|620027|gb|AAA74987.1| ribosomal protein S13 [Chlamydia trachomatis] gi|165930712|emb|CAP04209.1| SSU ribosomal protein S13P [Chlamydia trachomatis 434/Bu] gi|165931587|emb|CAP07163.1| SSU ribosomal protein S13P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 122 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|304373167|ref|YP_003856376.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1] gi|304309358|gb|ADM21838.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1] Length = 122 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KR+V AL YI GIG S++I K I R L ES++ IR+ + Sbjct: 1 MARILNIEIPNDKRIVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +DY EGDLRR V +NIKR++++ Y+G+RHR+GLPVRGQ T NARTRK Sbjct: 60 AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRK 110 >gi|162446982|ref|YP_001620114.1| 30S ribosomal protein S13 [Acholeplasma laidlawii PG-8A] gi|189040489|sp|A9NEF8|RS13_ACHLI RecName: Full=30S ribosomal protein S13 gi|161985089|gb|ABX80738.1| small subunit ribosomal protein S13 [Acholeplasma laidlawii PG-8A] Length = 124 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L YI+GIG ++Q++ + + RV L + ++ IR + Sbjct: 1 MARIAGVDIPTQKRVVISLQYIYGIGQTTAQEVLKNANVSEDIRVKDLNDDQLSAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR +NIKRLM++G YRG+RHR+GLPV GQ T NARTRK Sbjct: 61 AK-IVTEGDLRRESTLNIKRLMEIGSYRGIRHRKGLPVNGQNTRNNARTRK 110 >gi|330430074|gb|AEC21408.1| 30S ribosomal protein S13 [Pusillimonas sp. T7-7] Length = 121 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICESAGIELSKKVKDLTDAELERIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK Sbjct: 61 GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110 >gi|28198374|ref|NP_778688.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1] gi|71901053|ref|ZP_00683163.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|182681015|ref|YP_001829175.1| 30S ribosomal protein S13 [Xylella fastidiosa M23] gi|32363279|sp|Q87E61|RS13_XYLFT RecName: Full=30S ribosomal protein S13 gi|226712807|sp|B2I8J0|RS13_XYLF2 RecName: Full=30S ribosomal protein S13 gi|28056444|gb|AAO28337.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1] gi|71729180|gb|EAO31301.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|182631125|gb|ACB91901.1| ribosomal protein S13 [Xylella fastidiosa M23] gi|307579484|gb|ADN63453.1| 30S ribosomal protein S13 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 118 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L ESE+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSESEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRK 110 >gi|29839880|ref|NP_828986.1| 30S ribosomal protein S13 [Chlamydophila caviae GPIC] gi|89898701|ref|YP_515811.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56] gi|32363224|sp|P59752|RS13_CHLCV RecName: Full=30S ribosomal protein S13 gi|123482768|sp|Q252X2|RS13_CHLFF RecName: Full=30S ribosomal protein S13 gi|29834227|gb|AAP04864.1| ribosomal protein S13 [Chlamydophila caviae GPIC] gi|89332073|dbj|BAE81666.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56] Length = 122 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I KL + PE R +L E E+ ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAVELTEEEIGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSEYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|116490681|ref|YP_810225.1| 30S ribosomal protein S13 [Oenococcus oeni PSU-1] gi|118586178|ref|ZP_01543652.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163] gi|290890096|ref|ZP_06553179.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429] gi|122277135|sp|Q04G62|RS13_OENOB RecName: Full=30S ribosomal protein S13 gi|116091406|gb|ABJ56560.1| SSU ribosomal protein S13P [Oenococcus oeni PSU-1] gi|118433386|gb|EAV40078.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163] gi|290480287|gb|EFD88928.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429] Length = 123 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 79/112 (70%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG +++ + + + + RV L + ++R A+ Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAEKVLAEAGVSEDVRVRDLSPEDEDKVRAAV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + +EGDLRR V++NIK L ++ YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DKLNLTLEGDLRREVSLNIKGLQEIASYRGIRHRRGLPVRGQHTKNNARTRK 112 >gi|223936406|ref|ZP_03628318.1| ribosomal protein S13 [bacterium Ellin514] gi|223894924|gb|EEF61373.1| ribosomal protein S13 [bacterium Ellin514] Length = 131 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP KR+ +L YI+GIG ++++I I P R L E ++ QI AI Sbjct: 1 MARIIGVEIPGEKRIDISLRYIYGIGPVNAKEILENAKIDPSIRAKDLSEQQMSQIVHAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y +EGDLRR + MN+KRL + CYRG+RH R LPVRGQRT TNARTRK Sbjct: 61 QEGKYVIEGDLRRELGMNLKRLQGIKCYRGVRHLRSLPVRGQRTQTNARTRK 112 >gi|255348886|ref|ZP_05380893.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70] gi|255503426|ref|ZP_05381816.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70s] gi|255507104|ref|ZP_05382743.1| 30S ribosomal protein S13 [Chlamydia trachomatis D(s)2923] gi|289525554|emb|CBJ15032.1| SSU ribosomal protein S13P [Chlamydia trachomatis Sweden2] gi|296435114|gb|ADH17292.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150] gi|296438834|gb|ADH20987.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023] Length = 122 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|241895165|ref|ZP_04782461.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313] gi|241871471|gb|EER75222.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313] Length = 121 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL Y++GIG ++Q + + + + RV L + IR A+ Sbjct: 1 MARIAGVDLPRDKRIVIALTYVYGIGNSTAQKVLAEAKVSEDVRVRDLTPDQEDAIR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLRR V+M+IK L ++ YRG+RHR+GLPVRGQ T NARTRK Sbjct: 60 VDGIKVEGDLRREVSMSIKALQEINSYRGIRHRKGLPVRGQHTKNNARTRK 110 >gi|160942873|ref|ZP_02090112.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii M21/2] gi|158445774|gb|EDP22777.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii M21/2] gi|295103947|emb|CBL01491.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii SL3/3] Length = 123 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLDEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART Sbjct: 61 DQANILVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110 >gi|330444132|ref|YP_004377118.1| 30S ribosomal protein S13p/S18e [Chlamydophila pecorum E58] gi|328807242|gb|AEB41415.1| ribosomal protein S13p/S18e [Chlamydophila pecorum E58] Length = 122 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/111 (50%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIERLNLDPEARTSELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK Sbjct: 61 QSEYVVEGDLRRRVQSDIKRLIAIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111 >gi|228470693|ref|ZP_04055544.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3] gi|228307550|gb|EEK16546.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3] Length = 126 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/109 (50%), Positives = 71/109 (65%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR AL YI+GIG S+ I + + +V + + IR+ I Sbjct: 4 RIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQISN 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y+VEGDLR +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 GYKVEGDLRSEKQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112 >gi|320103639|ref|YP_004179230.1| 30S ribosomal protein S13P [Isosphaera pallida ATCC 43644] gi|319750921|gb|ADV62681.1| SSU ribosomal protein S13P [Isosphaera pallida ATCC 43644] Length = 127 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 73/111 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K +L YI+GIG + ++C +L I P +R L E E+ +I + Sbjct: 1 MPRLLGVDIPNDKPTQYSLRYIYGIGPTLALEVCQRLNIDPSKRARDLTEEELARIAALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +Y VEG LRR + + I RL + CYRGLRHR+ LPVRGQRT TNARTRK Sbjct: 61 DNEYTVEGQLRRQIQLAIGRLQAISCYRGLRHRKKLPVRGQRTRTNARTRK 111 >gi|257440243|ref|ZP_05615998.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165] gi|257197277|gb|EEU95561.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165] Length = 130 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 8 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 67 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART Sbjct: 68 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 117 >gi|189219453|ref|YP_001940094.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4] gi|226712760|sp|B3DVZ3|RS13_METI4 RecName: Full=30S ribosomal protein S13 gi|189186311|gb|ACD83496.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4] Length = 131 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K ++ AL I+GIG ++ IC + + P+ R L ++ +I Q I Sbjct: 1 MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E++ + VEGDLRR + NIKRL + CYRG+RH RGLPVRGQRT TNARTRK Sbjct: 61 EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRK 112 >gi|269115049|ref|YP_003302812.1| 30S ribosomal protein S13 [Mycoplasma hominis] gi|268322674|emb|CAX37409.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114] Length = 122 Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ + IP K+V +L YI GIG +++I + E+RV L E E+ +IR Sbjct: 1 MARVLNIEIPNNKKVRISLTYIFGIGVSLAKEILKDANVDGEKRVKDLSEEELTRIRDEA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 KK-YTTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQSTKKNARTRK 110 >gi|315320584|ref|YP_004072641.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005] gi|283569057|gb|ADB27594.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005] Length = 123 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G+++P+ KR+ AL YIHGIG S++ I I PE R +++ + + +R + Sbjct: 1 MVRLLGIDLPKNKRIEYALTYIHGIGLTSAKKIVKLAEINPETRTNEITVEQSVALRNIL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E + ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ENFELKLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|313112853|ref|ZP_07798499.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624758|gb|EFQ08067.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii KLE1255] Length = 123 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART Sbjct: 61 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110 >gi|296111452|ref|YP_003621834.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154] gi|295832984|gb|ADG40865.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154] Length = 123 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 DKLNLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVRGQNTKNNARTRK 112 >gi|317968837|ref|ZP_07970227.1| 30S ribosomal protein S13 [Synechococcus sp. CB0205] Length = 121 Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL Y++GIG ++Q I K + P+ RV L +S+V ++R A Sbjct: 1 MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E Y +EGDLRR M +KRL D+GC RG RHR GLPVRGQ Sbjct: 61 ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRVGLPVRGQ 100 >gi|313204941|ref|YP_004043598.1| SSU ribosomal protein s13p [Paludibacter propionicigenes WB4] gi|312444257|gb|ADQ80613.1| SSU ribosomal protein S13P [Paludibacter propionicigenes WB4] Length = 126 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 54/109 (49%), Positives = 72/109 (66%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV++P+ KR L YI+GIG S++ I + + +V + + +IR+ I Sbjct: 4 RIVGVDLPQNKRGEVGLTYIYGIGRSSAKKILESAGVDIDIKVKDWTDDQAAKIREIIGA 63 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++VEGDLR V NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 64 GFKVEGDLRSEVQTNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRK 112 >gi|88803727|ref|ZP_01119251.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P] gi|88780460|gb|EAR11641.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P] Length = 121 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG ++ + + + +V + + ++ IR+ + Sbjct: 1 MARIAGIDIPKNKRGVIALTYIFGIGSSRAKKVLAEAKVDESIKVQEWTDDQIAAIREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 -GSFTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 110 >gi|295101436|emb|CBK98981.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii L2-6] Length = 123 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILAATGINPDTRVKDLTLEEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART Sbjct: 61 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110 >gi|307128726|ref|YP_003880756.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI] gi|306483188|gb|ADM90058.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI] Length = 126 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 51/111 (45%), Positives = 74/111 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA I+G++IP KR + AL YI GIG +S+ I I +V + + QIR+ I Sbjct: 1 MAIISGIDIPNNKRGLIALTYIFGIGLSTSKKIFKNTGIDENLKVSNWSDDNLNQIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EG+L+ + ++IKR+M++GCYRG+RHR GLPVRGQ+T N RTRK Sbjct: 61 SDNLKIEGELKFEIQLDIKRMMEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111 >gi|262341035|ref|YP_003283890.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272372|gb|ACY40280.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 126 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 76/110 (69%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+GV++PR+KR + L Y++GIG S+ I + + I +++ + ++ ++R+ I Sbjct: 3 VRISGVDLPRSKRGIIGLTYLYGIGKSLSKIILHSVGIDENKKIENWSDDDISKVRKYIS 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EG+LR + N+KRLMD+GCY G RHR+GLP+RGQ+T N RTRK Sbjct: 63 NNIKIEGELRSEIQFNVKRLMDIGCYVGTRHRKGLPLRGQKTKNNCRTRK 112 >gi|225860275|ref|YP_002741784.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus pneumoniae Taiwan19F-14] gi|225727097|gb|ACO22948.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus pneumoniae Taiwan19F-14] Length = 109 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT 102 >gi|71842330|ref|YP_277418.1| ribosomal protein S13 [Emiliania huxleyi] gi|91207764|sp|Q4G349|RR13_EMIHU RecName: Full=30S ribosomal protein S13, chloroplastic gi|60101573|gb|AAX13917.1| ribosomal protein S13 [Emiliania huxleyi] Length = 124 Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 71/111 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+GV++PR KR+ L I GIG S+ I + P+ R L + +V +R I Sbjct: 1 MVRISGVDLPRNKRIQIGLTSIFGIGNTSADKILTTANLSPDIRCSDLTDEQVSSLRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ YQ EGDLRR ++NIKRL ++G G RHR LPVRGQRT TNARTRK Sbjct: 61 DESYQTEGDLRRVYSLNIKRLTEIGSAAGRRHRVNLPVRGQRTRTNARTRK 111 >gi|225165490|ref|ZP_03727316.1| ribosomal protein S13 [Opitutaceae bacterium TAV2] gi|224800267|gb|EEG18671.1| ribosomal protein S13 [Opitutaceae bacterium TAV2] Length = 125 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K+V +L YI+GIG + + + + P+ R L E ++ +I Q I Sbjct: 1 MPRLLGVDIPAKKKVSYSLRYIYGIGPVRADQVVKEAELNPDMRAQDLTEEQLNKILQVI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + VEGDLRR+ ++KRL +GCYRG+RHRR LPVRGQRT TNARTRK Sbjct: 61 TEHKWTVEGDLRRSHTADLKRLQAIGCYRGIRHRRSLPVRGQRTSTNARTRK 112 >gi|90994485|ref|YP_536975.1| ribosomal protein S13 [Porphyra yezoensis] gi|122194694|sp|Q1XDJ3|RR13_PORYE RecName: Full=30S ribosomal protein S13-2, chloroplastic gi|90819049|dbj|BAE92418.1| 30S ribosomal protein S13 [Porphyra yezoensis] Length = 126 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 75/104 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + + L + +V+ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 E +YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT Sbjct: 61 ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTR 104 >gi|149001659|ref|ZP_01826632.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69] gi|147760117|gb|EDK67106.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69] Length = 109 Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT 102 >gi|318042543|ref|ZP_07974499.1| 30S ribosomal protein S13 [Synechococcus sp. CB0101] Length = 121 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL Y++GIG ++Q I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDADVQKLRGAA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E Y +EGDLRR M +KRL D+GC RG RHR GLPVRGQ Sbjct: 61 ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRAGLPVRGQ 100 >gi|11465761|ref|NP_053905.1| ribosomal protein S13 [Porphyra purpurea] gi|1710693|sp|P51295|RR13_PORPU RecName: Full=30S ribosomal protein S13, chloroplastic gi|1276761|gb|AAC08181.1| 30S ribosomal protein S13 [Porphyra purpurea] Length = 126 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 54/104 (51%), Positives = 74/104 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + R L + +++ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILKKTNIDADIRCQNLNDQQIVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 E YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT Sbjct: 61 ESSYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTR 104 >gi|187734946|ref|YP_001877058.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835] gi|226712685|sp|B2UNG5|RS13_AKKM8 RecName: Full=30S ribosomal protein S13 gi|187424998|gb|ACD04277.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835] Length = 125 Score = 110 bits (274), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ G IP KR+ +L YI+GIG +S+ I + I P+ R QL + ++ +I Q I Sbjct: 1 MARLFGTEIPNEKRIEASLPYIYGIGRSTSKRILEQAGINPDIRTGQLTDEQLTKIVQVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 D +EGDLRR +KRL + CYRG RHRRGLPVRGQRT TNARTRK Sbjct: 61 TTDGILIEGDLRREKQSILKRLTSINCYRGQRHRRGLPVRGQRTRTNARTRK 112 >gi|302850780|ref|XP_002956916.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f. nagariensis] gi|300257797|gb|EFJ42041.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f. nagariensis] Length = 137 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI V IP +KR+ +L YI+GIG ++Q I + ++ ++L E EV ++RQ +++ Sbjct: 17 RINNVEIPNSKRIEVSLQYIYGIGQTTAQTILRDTGVE-NKKTYELNEEEVNKLRQEVDK 75 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y E DLRR V+ NIKRL D+GCYRG RH GLPVRGQRT TNARTRK K +K+ Sbjct: 76 -YTTEADLRRIVSQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 134 >gi|254449327|ref|ZP_05062772.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015] gi|198261086|gb|EDY85386.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015] Length = 97 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 1/90 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 ++GIG + IC+ I P+ ++ +L + E+ ++R + + + VEGDLRR V+MNIKRL Sbjct: 1 MYGIGRTRAYSICDAAGIKPDAKIRELGDDEIEKLRTEVGK-FSVEGDLRREVSMNIKRL 59 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 MDLGCYRGLRHRRGLP+RGQRT TNARTRK Sbjct: 60 MDLGCYRGLRHRRGLPLRGQRTKTNARTRK 89 >gi|168704698|ref|ZP_02736975.1| 30S ribosomal protein S13 [Gemmata obscuriglobus UQM 2246] Length = 127 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 5/123 (4%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K +L YI G+G ++ ++C KL + P+RR +L + E+ +I + Sbjct: 1 MPRIQGVDIPPDKPTHISLRYIRGLGPTTALEVCEKLNLDPQRRAKELNDKEIAEIAVLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GK 115 +++Y VEG LRR NI RL ++ CYRG RHR+ LPVRGQR+ TNARTRK GK Sbjct: 61 DKEYLVEGPLRRVEGSNIARLKEIKCYRGERHRKNLPVRGQRSKTNARTRKGIRKTVAGK 120 Query: 116 GGV 118 GV Sbjct: 121 KGV 123 >gi|32477616|ref|NP_870610.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1] gi|81658839|sp|Q7UIC7|RS13_RHOBA RecName: Full=30S ribosomal protein S13 gi|32448170|emb|CAD77687.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1] Length = 127 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 74/111 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K++ +L Y++G+G ++++C KL I P + + +V +I + Sbjct: 1 MPRLMGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+DY VEG LRR V NI R+ ++ YRG+RHR LPVRGQRT TNARTRK Sbjct: 61 ERDYLVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRK 111 >gi|15829034|ref|NP_326394.1| 30S ribosomal protein S13 [Mycoplasma pulmonis UAB CTIP] gi|32363385|sp|Q98Q06|RS13_MYCPU RecName: Full=30S ribosomal protein S13 gi|14089978|emb|CAC13736.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma pulmonis] Length = 132 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/121 (52%), Positives = 78/121 (64%), Gaps = 11/121 (9%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----NKLAIPPER------RVHQLVE 50 MARI + IP KRVV +L YI GIG S++I KLA E+ RV L E Sbjct: 1 MARILNIEIPSNKRVVISLTYILGIGKSLSKEIIVKANEKLAKAKEKTFTEDSRVKDLSE 60 Query: 51 SEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 ++ IR + + Y EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T NARTR Sbjct: 61 EQLQAIRDS-AKTYLTEGDLRREVSLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTR 119 Query: 111 K 111 K Sbjct: 120 K 120 >gi|254446003|ref|ZP_05059479.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235] gi|198260311|gb|EDY84619.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235] Length = 123 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 59/112 (52%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L YI+GIG S+ I + I P+ R L E ++ I I Sbjct: 1 MPRILGVDIPANKKLEYSLRYIYGIGPTRSKTILAQTGIDPDMRAKNLDEEQINAIMAKI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ VEGDLRR + N+KRL + CYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 61 QELQLVVEGDLRRELTSNMKRLQAINCYRGLRHRRGLPVRGQRTKTNARTRK 112 >gi|47459094|ref|YP_015956.1| 30S ribosomal protein S13 [Mycoplasma mobile 163K] gi|81614321|sp|Q6KI31|RS13_MYCMO RecName: Full=30S ribosomal protein S13 gi|47458423|gb|AAT27745.1| 30S ribosomal protein s13 [Mycoplasma mobile 163K] Length = 122 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRV+ +L Y++GIG S+ I + I RV L E ++ +IR I Sbjct: 1 MARILNVEIPNNKRVIISLTYVYGIGRSLSKQILAEANIDENIRVKDLSEEDLTKIRN-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK Sbjct: 60 ASRFTTEGDLRREIQLNIKRLMEIKSYRGIRHRKGLPVRGQVTQKNARTRK 110 >gi|71276501|ref|ZP_00652776.1| Ribosomal protein S13 [Xylella fastidiosa Dixon] gi|71900588|ref|ZP_00682715.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|170729721|ref|YP_001775154.1| 30S ribosomal protein S13 [Xylella fastidiosa M12] gi|226712808|sp|B0U5M0|RS13_XYLFM RecName: Full=30S ribosomal protein S13 gi|71162678|gb|EAO12405.1| Ribosomal protein S13 [Xylella fastidiosa Dixon] gi|71729645|gb|EAO31749.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|167964514|gb|ACA11524.1| 30S ribosomal protein S13 [Xylella fastidiosa M12] Length = 118 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRK 110 >gi|254495364|ref|ZP_05108288.1| 30S ribosomal protein S13 [Polaribacter sp. MED152] gi|85819718|gb|EAQ40875.1| 30S ribosomal protein S13 [Polaribacter sp. MED152] Length = 121 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG ++ + + + +V + ++ IR+ + Sbjct: 1 MARIAGIDIPKNKRGVIALTYIFGIGNSRAKKVLAEAKVDESIKVQDWTDEQIAAIREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 -GSFTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 110 >gi|91216887|ref|ZP_01253851.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755] gi|91185048|gb|EAS71427.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755] Length = 124 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG ++ + + + +V + ++ +IR + Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGNSRAKKVLKEAGVDESIKVSDWNDDQIGKIRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ +EG+LR V ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK Sbjct: 61 GKN-TIEGELRSQVQIHIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110 >gi|145344575|ref|XP_001416805.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus lucimarinus CCE9901] gi|144577031|gb|ABO95098.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus lucimarinus CCE9901] Length = 119 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/110 (50%), Positives = 76/110 (69%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP KR AL Y++GIG S++ I + +R+ + E E+ Q+R+ +E Sbjct: 1 ARVAGVEIPNNKRCETALTYVYGIGETSAKAIMAATGLE-NKRLREFSEQELTQLREEVE 59 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + YQ+EG+LRR + MNIKRL ++ C+RG H R LPVRGQRT TNARTRK Sbjct: 60 K-YQIEGELRRFITMNIKRLKEIQCHRGKMHIRNLPVRGQRTKTNARTRK 108 >gi|290512090|ref|ZP_06551458.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp. 1_1_55] gi|289775880|gb|EFD83880.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp. 1_1_55] Length = 106 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 1/99 (1%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72 K V AL I GIG S+ IC + I ++ +L E ++ +R+A+ + + VEGDLRR Sbjct: 1 KHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAVGK-FVVEGDLRR 59 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 60 EITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 98 >gi|11466637|ref|NP_066320.1| ribosomal protein S13 [Malawimonas jakobiformis] gi|10178675|gb|AAG13687.1|AF295546_13 ribosomal protein S13 [Malawimonas jakobiformis] Length = 126 Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G I + K + AL I+G+G+K++ ICN + I ++++ ++ +++ IR+ + Sbjct: 1 MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++ GDLRR +++NIKR +D+ YRGLRH+ PVRGQRTHTNART+K Sbjct: 61 NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111 >gi|182412029|ref|YP_001817095.1| 30S ribosomal protein S13 [Opitutus terrae PB90-1] gi|226712770|sp|B1ZNC6|RS13_OPITP RecName: Full=30S ribosomal protein S13 gi|177839243|gb|ACB73495.1| ribosomal protein S13 [Opitutus terrae PB90-1] Length = 129 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV IP K+V +L YI+GIG + + + + P+ R L E ++ +I I Sbjct: 1 MPRLLGVEIPAKKKVAYSLRYINGIGPTRADLLVKEAGLSPDMRAQDLTEEQLNKILHLI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + +EGDLRR +A N+KRL + CYRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 TEHKWVLEGDLRREIAGNLKRLQAINCYRGVRHRRGLPVRGQRTSTNARTRK 112 >gi|254430942|ref|ZP_05044645.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001] gi|197625395|gb|EDY37954.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001] Length = 121 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL Y++GIG +Q I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRVEIALTYVYGIGLTRAQKILAKTGVDPDTRVKDLSDADVQKLRGAA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR GLPVRGQ Sbjct: 61 ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQ 100 >gi|167752409|ref|ZP_02424536.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216] gi|167660650|gb|EDS04780.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216] Length = 126 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I ++ I + +V + +V IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILDEAGISYDLKVQDWSDEQVGAIRSKI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ADMGIKVEGECRSVVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112 >gi|227502696|ref|ZP_03932745.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725] gi|227076426|gb|EEI14389.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725] Length = 108 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/94 (54%), Positives = 68/94 (72%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG ++++ K I P+ R L + +V +R AIE ++VEGDLRR V + Sbjct: 4 ALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAIEGSWKVEGDLRRQVQAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 64 IRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 97 >gi|291286336|ref|YP_003503152.1| 30S 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809] gi|290883496|gb|ADD67196.1| 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809] Length = 122 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+I K+V L I+G+G +++ I + + +R+ L E ++ IR+ I Sbjct: 1 MARIAGVDIQNNKKVEVGLTNIYGVGRATARLILADINVDLSKRIGDLSEQDISAIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119 E + VEGDLR+ A+NIKRLM++ CYRG RH+ LP RGQ+T +NARTR+ GK G+ Sbjct: 61 EDNLTVEGDLRKETALNIKRLMEINCYRGSRHKMHLPCRGQKTRSNARTRRGLAGKRGIK 120 Query: 120 RK 121 +K Sbjct: 121 KK 122 >gi|193216737|ref|YP_001999979.1| 30S ribosomal protein S13 [Mycoplasma arthritidis 158L3-1] gi|226712764|sp|B3PMM3|RS13_MYCA5 RecName: Full=30S ribosomal protein S13 gi|193002060|gb|ACF07275.1| ribosomal protein S13 [Mycoplasma arthritidis 158L3-1] Length = 122 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ V IP KR V +L YI GIG + I + ++V L E E+ +IR+ Sbjct: 1 MARVLNVEIPNKKRAVISLTYIFGIGKTLASQILKDANVDENKKVESLSEEELTRIREEA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK Sbjct: 61 KK-YVTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQCTQKNARTRK 110 >gi|148243236|ref|YP_001228393.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307] gi|158706291|sp|A5GVY1|RS13_SYNR3 RecName: Full=30S ribosomal protein S13 gi|147851546|emb|CAK29040.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307] Length = 121 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV AL YI+G+G SQ I + P+ RV L +++V ++R A Sbjct: 1 MARISGVDIPREKRVEIALTYIYGVGLTRSQKILASTGVSPDTRVKDLSDADVQKLRAAA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR GLPVRGQ Sbjct: 61 ET-FTLEGDLRRQEGMAMKRLQDIGCLRGRRHRMGLPVRGQ 100 >gi|118411210|ref|YP_874604.1| 30S ribosomal protein S13 [Thalassiosira pseudonana] gi|125987679|sp|A0T0Z2|RR13_THAPS RecName: Full=30S ribosomal protein S13, chloroplastic gi|116739957|gb|ABK20827.1| 30S ribosomal protein S13 [Thalassiosira pseudonana] Length = 123 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G+++PR KR+ AL YIHGIG S+Q I + R + + + +R + Sbjct: 1 MVRLLGIDLPRNKRIAYALTYIHGIGLTSAQKFIELAEISADTRTDDITTEQAVVLRNLL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E + +EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ENCELNLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|159485052|ref|XP_001700563.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii] gi|158272203|gb|EDO98007.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii] Length = 164 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ V IP +KR+ +L YI GIG ++Q I + ++ ++L E E+ ++R +E+ Sbjct: 44 RVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGVE-NKKTYELNEEEINKLRSEVEK 102 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y E DLRR VA NIKRL D+GCYRG RH GLPVRGQRT TNARTRK K +K+ Sbjct: 103 -YTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 161 >gi|297180258|gb|ADI16477.1| hypothetical protein [uncultured bacterium HF4000_05M23] Length = 127 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA IAGVNIP +R+ AL I+GIG +S+ I + + RV L + ++ ++R A+ Sbjct: 1 MAIIAGVNIPDNQRLEIALTAIYGIGRTTSKKIVGDVGMGDTTRVRDLTDEDLARVRSAV 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E+ +EGDLRR +NI+RL D+ +RG+RHRRGLPVRGQRT TNART++ Sbjct: 61 ERTGLLIEGDLRRETQLNIRRLTDIQTFRGVRHRRGLPVRGQRTKTNARTKR 112 >gi|196228477|ref|ZP_03127344.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428] gi|196227880|gb|EDY22383.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428] Length = 128 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV IP KR+ +L YI+GIG +++ I + I P+ R L ++ QI QAI Sbjct: 1 MPRLLGVEIPGDKRIEASLPYIYGIGPSTAKRILEQANINPDVRAKDLSNEQLNQIIQAI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +EGDLRR + N+KRL + CYRG+RHRR LPVRGQRT TNARTRK Sbjct: 61 TASKLPIEGDLRRELQSNLKRLQAINCYRGIRHRRSLPVRGQRTSTNARTRK 112 >gi|87300892|ref|ZP_01083734.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701] gi|87284763|gb|EAQ76715.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701] Length = 121 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L Y++GIG +Q I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEISLTYVYGIGLSRAQKILTKAGVNPDIRVKDLDDGDVQKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR GLPVRGQ Sbjct: 61 ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQ 100 >gi|91200690|emb|CAJ73741.1| strongly similar to 30S ribosomal protein S13 [Candidatus Kuenenia stuttgartiensis] Length = 127 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 70/111 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP KR+V AL Y +GIG S+ I +L I R L E ++ + I Sbjct: 1 MPRIAGTDIPADKRIVVALTYFYGIGGALSKKILRELNIDENVRTKDLHEDQLSILGAHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++Y VEG LRR NI RL + CYRG+RHR GLPVRGQRT TNARTRK Sbjct: 61 GKNYNVEGQLRRQELQNISRLRSISCYRGMRHRIGLPVRGQRTKTNARTRK 111 >gi|291514965|emb|CBK64175.1| SSU ribosomal protein S13P [Alistipes shahii WAL 8301] Length = 126 Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I I + +V + ++ IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILETAGISYDLKVQDWSDDQIGAIRSTI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ADLGLKVEGECRSMVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112 >gi|313158274|gb|EFR57676.1| 30S ribosomal protein S13 [Alistipes sp. HGB5] Length = 126 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I I + +V + ++ IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILEVAGISYDLKVQDWSDDQIGAIRSTI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ADMGIKVEGECRSAVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112 >gi|33862093|ref|NP_893654.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575584|sp|Q7UZW4|RS13_PROMP RecName: Full=30S ribosomal protein S13 gi|33634311|emb|CAE19996.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 121 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+G+G S+ I + + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYIYGVGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E D+ VEGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 E-DFTVEGDLRRKEGMAMKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|123966952|ref|YP_001012033.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515] gi|158706262|sp|A2BYR5|RS13_PROM5 RecName: Full=30S ribosomal protein S13 gi|123201318|gb|ABM72926.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515] Length = 121 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+GIG S+ I + + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYIYGIGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRVAA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E D+ VEGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 E-DFTVEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|11466521|ref|NP_044770.1| ribosomal protein S13 [Reclinomonas americana] gi|2258351|gb|AAD11885.1| ribosomal protein S13 [Reclinomonas americana] Length = 122 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 48/115 (41%), Positives = 76/115 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G+NI K++ AL I+G+G K ++C+ + + P+ ++ L ES++ ++ I Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 E+++ +E +LR+ NIKRL+D+ YRGLRH GLPV GQRTHTNA+T+K K Sbjct: 61 EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115 >gi|237728633|ref|ZP_04559114.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2] gi|226909255|gb|EEH95173.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2] Length = 103 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL I+G+G S+ I I + ++ +L E ++ +R + + + VEGDLRR V+M+ Sbjct: 3 ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEVAK-FVVEGDLRREVSMS 61 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 62 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95 >gi|296105006|ref|YP_003615152.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059465|gb|ADF64203.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 103 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL I+GIG S+ I I + ++ +L E ++ +R + + + VEGDLRR ++M+ Sbjct: 3 ALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMS 61 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 62 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95 >gi|148238749|ref|YP_001224136.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803] gi|158706290|sp|A5GIS4|RS13_SYNPW RecName: Full=30S ribosomal protein S13 gi|147847288|emb|CAK22839.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803] Length = 121 Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG +Q I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGLTRAQTILSKTGVNPDTRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|281415635|ref|ZP_06247377.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] Length = 108 Score = 106 bits (265), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 51/94 (54%), Positives = 66/94 (70%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+G+G +++ I P RV L +++Q+R IE Y+VEGDLRR VA + Sbjct: 4 ALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHIEGSYKVEGDLRREVAAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++G Y GLRHRRGLPVRGQRT TNARTRK Sbjct: 64 IRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 97 >gi|255069915|ref|XP_002507039.1| ribosomal protein S13, chloroplast precursor [Micromonas sp. RCC299] gi|226522314|gb|ACO68297.1| ribosomal protein S13, chloroplast precursor [Micromonas sp. RCC299] Length = 176 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP K+ AL Y++GIG +++ I K + +RV + E E+ +R ++ Sbjct: 58 ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGLE-NKRVREFEEEELTILRAEVD 116 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EGDLRR +NIKRL ++ CYRG RH RGLPVRGQRT TNARTRK Sbjct: 117 -TYMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRK 165 >gi|327402760|ref|YP_004343598.1| 30S ribosomal protein S13P [Fluviicola taffensis DSM 16823] gi|327318268|gb|AEA42760.1| SSU ribosomal protein S13P [Fluviicola taffensis DSM 16823] Length = 124 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++ + I +V + ++ IR AI Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGRSTAKKVLVNNGIDENIKVQDWNDDQIALIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + EG LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 SE-IKTEGQLRSEIQLNIKRLMDIGCTRGIRHRAGLPLRGQRTKNNSRTRK 110 >gi|227505243|ref|ZP_03935292.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940] gi|227198142|gb|EEI78190.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940] Length = 108 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/94 (52%), Positives = 68/94 (72%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG ++++ K I P+ R L + ++ +R IE ++VEGDLRR V + Sbjct: 4 ALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDVIEATWKVEGDLRRQVQAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK Sbjct: 64 IRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 97 >gi|294055199|ref|YP_003548857.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221] gi|293614532|gb|ADE54687.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221] Length = 120 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 5/119 (4%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L Y++GIG ++ I + P+RR L E E+ Q+ + Sbjct: 1 MPRILGVDIPANKKLEYSLRYVYGIGPTRAKTIVAEAGFDPDRRAGDLSEEELNQLATIV 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 ++ Y VEGDLRR + N+KRL+ + +RG+RH RGLPVRGQRT TNARTR KGGV Sbjct: 61 ADKQYVVEGDLRREITANLKRLIAVRSWRGMRHARGLPVRGQRTKTNARTR----KGGV 115 >gi|27904920|ref|NP_778046.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32363301|sp|Q89A87|RS13_BUCBP RecName: Full=30S ribosomal protein S13 gi|27904318|gb|AAO27151.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 118 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NI K VV AL ++GIG S+ IC + I ++ L + ++ +R + Sbjct: 1 MARIAGINIANHKHVVVALMDVYGIGKTRSKLICLRTNISESIKILDLTKDQLELLRCEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V ++IKRL DL CYRG RHR+ LPVRGQRT TNARTRK Sbjct: 61 LK-FVVEGDLRREVTLSIKRLQDLNCYRGSRHRKKLPVRGQRTKTNARTRK 110 >gi|78211907|ref|YP_380686.1| 30S ribosomal protein S13 [Synechococcus sp. CC9605] gi|123578843|sp|Q3AMQ1|RS13_SYNSC RecName: Full=30S ribosomal protein S13 gi|78196366|gb|ABB34131.1| ribosomal protein S13 [Synechococcus sp. CC9605] Length = 121 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ +L YI+G+G SQ I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRGAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +Y VEGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 E-NYTVEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|303270835|ref|XP_003054779.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462753|gb|EEH60031.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 182 Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP KR AL YI+G+G +++ + + +R+ + E E+ ++R+A++ Sbjct: 63 ARVAGVEIPNNKRAETALTYIYGVGDTTAKKVMATTGLE-NKRMREFEEDELTRLREAVD 121 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +EGDLRR +MNIKRL ++ CYRG RH +GLP RGQR+ TNARTRK Sbjct: 122 ELPLIEGDLRRFNSMNIKRLKEIQCYRGKRHIQGLPCRGQRSKTNARTRK 171 >gi|72382946|ref|YP_292301.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL2A] gi|91207715|sp|Q46IT0|RS13_PROMT RecName: Full=30S ribosomal protein S13 gi|72002796|gb|AAZ58598.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. NATL2A] Length = 121 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G++IPR KRV AL YI+GIG +Q I K + P+ RV L +S++ ++R A+ Sbjct: 1 MARISGIDIPREKRVEVALTYIYGIGLTRAQSILEKSGVNPDIRVKDLEDSDIQKLR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++ +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 60 TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|11467736|ref|NP_050788.1| ribosomal protein S13 [Guillardia theta] gi|3914830|sp|O46912|RR13_GUITH RecName: Full=30S ribosomal protein S13, chloroplastic gi|3603061|gb|AAC35722.1| ribosomal protein S13 [Guillardia theta] Length = 122 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/104 (50%), Positives = 72/104 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR+ AL YI+G+G SSQ I K I +R L ++EV IR I Sbjct: 1 MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCKDLDDNEVSLIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 +++Y VEG +R +MNIKRLM++ C RG RHR GLP+RGQRT Sbjct: 61 DENYPVEGAAKRVESMNIKRLMEINCIRGKRHRVGLPLRGQRTR 104 >gi|260435148|ref|ZP_05789118.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109] gi|260413022|gb|EEX06318.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109] Length = 121 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ +L YI+G+G SQ I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRNAM 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E+ Y +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EE-YTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|161616444|ref|YP_001590409.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365808|gb|ABX69576.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|321226469|gb|EFX51519.1| SSU ribosomal protein S13p S18e [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 103 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL I+G+G S+ I I ++ +L E ++ +R + + + VEGDLRR ++M+ Sbjct: 3 ALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREISMS 61 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 62 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95 >gi|124024017|ref|YP_001018324.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303] gi|158706261|sp|A2CC49|RS13_PROM3 RecName: Full=30S ribosomal protein S13 gi|123964303|gb|ABM79059.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303] Length = 121 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSGVNPDIRVKDLEDGDVQKLRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|327538950|gb|EGF25588.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47] Length = 123 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 50/106 (47%), Positives = 71/106 (66%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 GV+IP K++ +L Y++G+G ++++C KL I P + + +V +I +E+DY Sbjct: 2 GVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLERDYL 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEG LRR V NI R+ ++ YRG+RHR LPVRGQRT TNARTRK Sbjct: 62 VEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRK 107 >gi|33241140|ref|NP_876082.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663961|sp|Q7V9Y3|RS13_PROMA RecName: Full=30S ribosomal protein S13 gi|33238670|gb|AAQ00735.1| Ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 121 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG +Q+I K + P+ RV L + +V ++R A Sbjct: 1 MARIAGIDLPRDKRVEIALTYIYGIGLTRAQNILAKTGVNPDIRVKDLEDGDVQKLRAAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|312601094|gb|ADQ90349.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 168] Length = 137 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 12/133 (9%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------------IPPERRVHQL 48 MAR+ V IP KR+V ALC I GIG + +I K A I E + Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQKEKFGKKFPILTENTKVKE 60 Query: 49 VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + EV+Q+ + + + Y+ EGDL R V NIKRL+++ CYRG+RHR+GLPVRGQ T NAR Sbjct: 61 INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120 Query: 109 TRKKFGKGGVARK 121 TRK K +A+K Sbjct: 121 TRKGPRKTIMAKK 133 >gi|325108637|ref|YP_004269705.1| 30S ribosomal protein S13P [Planctomyces brasiliensis DSM 5305] gi|324968905|gb|ADY59683.1| SSU ribosomal protein S13P [Planctomyces brasiliensis DSM 5305] Length = 128 Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 5/123 (4%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K +L Y++GIG ++ +IC +L I P + + + + Q+ + Sbjct: 1 MPRVQGVDIPNNKAAYISLTYLYGIGRHTAIEICRRLQIEPTMKAKDIGDDTLAQLNNLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GK 115 + DY +EG LRR +I RL ++ YRG+RHRRGLPVRGQRT TNARTRK GK Sbjct: 61 DTDYVIEGQLRRQTQQHIARLREIQSYRGIRHRRGLPVRGQRTITNARTRKGVRKTVAGK 120 Query: 116 GGV 118 GV Sbjct: 121 KGV 123 >gi|54020093|ref|YP_115724.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 232] gi|71893522|ref|YP_278968.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J] gi|72080509|ref|YP_287567.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448] gi|81378720|sp|Q601J1|RS13_MYCH2 RecName: Full=30S ribosomal protein S13 gi|123645173|sp|Q4A8J5|RS13_MYCH7 RecName: Full=30S ribosomal protein S13 gi|123645895|sp|Q4AAG4|RS13_MYCHJ RecName: Full=30S ribosomal protein S13 gi|53987266|gb|AAV27467.1| 30s ribosomal protein S13 [Mycoplasma hyopneumoniae 232] gi|71851649|gb|AAZ44257.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J] gi|71913633|gb|AAZ53544.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448] Length = 137 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 12/133 (9%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------------IPPERRVHQL 48 MAR+ V IP KR+V ALC I GIG + +I K A I E + Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60 Query: 49 VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + EV+Q+ + + + Y+ EGDL R V NIKRL+++ CYRG+RHR+GLPVRGQ T NAR Sbjct: 61 INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120 Query: 109 TRKKFGKGGVARK 121 TRK K +A+K Sbjct: 121 TRKGPRKTIMAKK 133 >gi|33864020|ref|NP_895580.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313] gi|81576938|sp|Q7V525|RS13_PROMM RecName: Full=30S ribosomal protein S13 gi|33635604|emb|CAE21928.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313] Length = 121 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSDVNPDIRVKDLEDGDVQKLRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|126697067|ref|YP_001091953.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301] gi|157414142|ref|YP_001485008.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215] gi|254526937|ref|ZP_05138989.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202] gi|158706259|sp|A3PF27|RS13_PROM0 RecName: Full=30S ribosomal protein S13 gi|166991601|sp|A8G741|RS13_PROM2 RecName: Full=30S ribosomal protein S13 gi|126544110|gb|ABO18352.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301] gi|157388717|gb|ABV51422.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215] gi|221538361|gb|EEE40814.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202] Length = 121 Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|113953764|ref|YP_729646.1| 30S ribosomal protein S13 [Synechococcus sp. CC9311] gi|123031877|sp|Q0ID26|RS13_SYNS3 RecName: Full=30S ribosomal protein S13 gi|113881115|gb|ABI46073.1| ribosomal protein S13 [Synechococcus sp. CC9311] Length = 121 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGSTRAKTILTKAGVNPDIRVKDLEDNDVQKLRNAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|262186727|ref|YP_003275986.1| ribosomal protein S13 [Pleurozia purpurea] gi|237780724|gb|ACR19370.1| ribosomal protein S13 [Pleurozia purpurea] Length = 120 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 50/113 (44%), Positives = 74/113 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ K+V AL I GIG K + +C++L + +V++L + + QI + I Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDRLGLSDNIKVNKLTKYQFDQIIEII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L R + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDSELERVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTSRKL 113 >gi|159904198|ref|YP_001551542.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211] gi|226712777|sp|A9BCM6|RS13_PROM4 RecName: Full=30S ribosomal protein S13 gi|159889374|gb|ABX09588.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211] Length = 121 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+G+G ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGIDIPREKRVEVALTYIYGVGLTRAKSILAKAGVNPDIRVKDLDDGDVQKLRTAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 ES-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|88807906|ref|ZP_01123417.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805] gi|88787945|gb|EAR19101.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805] Length = 121 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGLTRAKTILSKTGVNPDIRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|259506744|ref|ZP_05749644.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] gi|259165685|gb|EEW50239.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] Length = 108 Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 47/94 (50%), Positives = 66/94 (70%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG ++ + + + P+ R L + ++ +R IE ++VEGDLRR V + Sbjct: 4 ALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVIEATWKVEGDLRREVQAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK Sbjct: 64 IRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 97 >gi|261749448|ref|YP_003257134.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497541|gb|ACX83991.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 126 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 73/110 (66%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+GV++P++KR + L Y++GI S+ I + + I +V + ++ IR+ I Sbjct: 3 VRISGVDLPKSKRGIIGLTYLYGISKSLSKKILSSVGIDENMKVMDWSDEKISNIRKYIS 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++EG+LR + ++IKRLMD+GCYRG RHR+ LP+RGQ+T N RTRK Sbjct: 63 NHVKIEGELRSEIQLSIKRLMDIGCYRGTRHRKRLPLRGQKTKNNCRTRK 112 >gi|149072028|ref|YP_001293599.1| ribosomal protein S13 [Rhodomonas salina] gi|158706197|sp|A6MW20|RR13_RHDSA RecName: Full=30S ribosomal protein S13, chloroplastic gi|134302979|gb|ABO70783.1| ribosomal protein S13 [Rhodomonas salina] Length = 123 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 53/104 (50%), Positives = 69/104 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SSQ I + R L + ++ +IRQ I Sbjct: 1 MARIAGVDLPRNKRIEIGLTYIYGIGLTSSQSILKVATVDSNIRCKDLTDEDISKIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 ++DY VEG RR M+IKRLM++ C +G RHR GLP+RGQRT Sbjct: 61 DEDYLVEGVARRIETMSIKRLMEINCVKGRRHRDGLPLRGQRTR 104 >gi|11467125|ref|NP_054426.1| ribosomal protein S13 [Marchantia polymorpha] gi|417736|sp|P26872|RT13_MARPO RecName: Full=Ribosomal protein S13, mitochondrial gi|250828|gb|AAB22420.1| ribosomal protein S13 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 120 aa] gi|786210|gb|AAC09423.1| rps13 [Marchantia polymorpha] Length = 120 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 50/113 (44%), Positives = 75/113 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ K+V AL I GIG K + +C++L + +V++L + + QI + I Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L+R + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKL 113 >gi|168005006|ref|XP_001755202.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693795|gb|EDQ80146.1| predicted protein [Physcomitrella patens subsp. patens] Length = 133 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 4/112 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60 ARI GV +P KR+ AL IHG+G +++ I L I E +V +L E E+ +IR+ + Sbjct: 8 ARIEGVELPNKKRIETALQSIHGVGKTTARQIL--LTIGLENKVTSELSELELTKIREEL 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y +EG LRR A+NI+RL+D+ CYRG RHR GLPVRGQRT NARTRK+ Sbjct: 66 -SNYMIEGKLRRFNALNIQRLVDIQCYRGRRHRAGLPVRGQRTKCNARTRKR 116 >gi|78780014|ref|YP_398126.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9312] gi|91207714|sp|Q318K5|RS13_PROM9 RecName: Full=30S ribosomal protein S13 gi|78713513|gb|ABB50690.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. MIT 9312] Length = 121 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANAGVNPDIRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|219559528|ref|ZP_03538604.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T17] gi|289571694|ref|ZP_06451921.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17] gi|289545448|gb|EFD49096.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17] Length = 110 Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 51/94 (54%), Positives = 65/94 (69%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI GIG S +I I + R L E ++I +R IE + +VEGDLRR V + Sbjct: 4 ALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREVQAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK Sbjct: 64 IRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 97 >gi|87124984|ref|ZP_01080831.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917] gi|86167304|gb|EAQ68564.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917] Length = 121 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGPTRARTILSKTGVNPDIRVKDLDDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E Y +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-YTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100 >gi|124026688|ref|YP_001015803.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A] gi|158706260|sp|A2C4X9|RS13_PROM1 RecName: Full=30S ribosomal protein S13 gi|123961756|gb|ABM76539.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A] Length = 121 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G++IPR KRV AL YI+GIG +Q I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARISGIDIPREKRVEVALTYIYGIGLTRAQAILEKSGVNPDIRVKDLDDGDIQKLR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++ +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 60 TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|86279737|gb|ABC94521.1| 30S ribosomal protein S13 [Hanusia phi] Length = 100 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/100 (49%), Positives = 69/100 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR+ AL YI+G+G SSQ I K I +R L ++E+ IR I Sbjct: 1 MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCRDLDDNEISLIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y VEG +R +MNIKRLM++ C RG RHR GLP+RG Sbjct: 61 DENYPVEGAAKRIESMNIKRLMEINCIRGKRHRLGLPLRG 100 >gi|328772175|gb|EGF82214.1| hypothetical protein BATDEDRAFT_10132 [Batrachochytrium dendrobatidis JAM81] Length = 142 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN+P K V AL ++G+G K+ + IC+KL I P+ R+ L ES+V Q+ Q + Sbjct: 1 MLYLLGVNLPDEKLVHIALTSVYGVGRKTGEQICHKLLIHPQCRLKDLPESKVTQLSQLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +E +LRR NIK L+D+G YRG+RH+ GLPV GQRT +NA T K+ Sbjct: 61 -NTMTIEAELRRQTEENIKSLVDMGTYRGMRHKAGLPVNGQRTRSNASTAKRL 112 >gi|123969277|ref|YP_001010135.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601] gi|158706263|sp|A2BTB7|RS13_PROMS RecName: Full=30S ribosomal protein S13 gi|123199387|gb|ABM71028.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601] Length = 121 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L + +V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|86279741|gb|ABC94524.1| 30S ribosomal protein S13 [Chroomonas mesostigmatica] Length = 101 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG +SQ I +K + + R L +S+V+ IR+ I Sbjct: 1 MARIAGVDLPKNKRVEIALTYIYGIGLSTSQSILSKANVSFDVRCKDLEDSDVMTIREII 60 Query: 61 EQDYQVEGDLRRTV-AMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y VEG +R + ++NIKRLM++ C RG RHR GLP+RG Sbjct: 61 DEEYPVEGAAKREIESLNIKRLMEVNCIRGRRHRAGLPLRG 101 >gi|282891931|ref|ZP_06300410.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498191|gb|EFB40531.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 104 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/93 (52%), Positives = 63/93 (67%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 + YI+G+G + + +I KL + P R H+L E E+ I ++ Y VEGDL+R V NI Sbjct: 1 MTYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQSQYVVEGDLKRQVQNNI 60 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 KRL+ + YRG RHR GLPVRGQRT TNARTRK Sbjct: 61 KRLISIHSYRGQRHRVGLPVRGQRTRTNARTRK 93 >gi|293977951|ref|YP_003543381.1| 30S ribosomal protein S13P [Candidatus Sulcia muelleri DMIN] gi|292667882|gb|ADE35517.1| SSU ribosomal protein S13P [Candidatus Sulcia muelleri DMIN] Length = 123 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 73/111 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA ++G+ IP K + AL YI GIG +S+ I I +V + ++ +IR+ I Sbjct: 1 MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVRNWSDEDINKIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EG+LR + ++IKR++++GCYRG+RHR GLPVRGQ+T N RTRK Sbjct: 61 SSNLRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111 >gi|171914056|ref|ZP_02929526.1| 30S ribosomal protein S13 [Verrucomicrobium spinosum DSM 4136] Length = 131 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV IP KR+ +L YI+GIG ++ I + I P R +L + ++ +I + + Sbjct: 1 MARLLGVEIPNEKRIEASLPYIYGIGPSLTRKILAETGIDPNIRAGELSDEQLAEISRIV 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR + ++KRL + CYR RHRRGLPVRGQRT TN+RTRK Sbjct: 61 AAKGIVVEGDLRRELGAHMKRLTSINCYRATRHRRGLPVRGQRTKTNSRTRK 112 >gi|116072179|ref|ZP_01469447.1| 30S ribosomal protein S13 [Synechococcus sp. BL107] gi|116065802|gb|EAU71560.1| 30S ribosomal protein S13 [Synechococcus sp. BL107] Length = 121 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG ++ I K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|116075746|ref|ZP_01473005.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916] gi|116067061|gb|EAU72816.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916] Length = 121 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I ++ + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGPTRARTILSQTGVNPDTRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 E-GFTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|118465138|ref|YP_883536.1| 30S ribosomal protein S13 [Mycobacterium avium 104] gi|118166425|gb|ABK67322.1| ribosomal protein S13p/S18e [Mycobacterium avium 104] Length = 110 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/94 (52%), Positives = 65/94 (69%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+G+G S +I I + R L + ++ +R IE + +VEGDLRR V + Sbjct: 4 ALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYIEANLKVEGDLRREVQAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK Sbjct: 64 IRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 97 >gi|78185543|ref|YP_377977.1| 30S ribosomal protein S13 [Synechococcus sp. CC9902] gi|123581060|sp|Q3AW72|RS13_SYNS9 RecName: Full=30S ribosomal protein S13 gi|78169837|gb|ABB26934.1| SSU ribosomal protein S13P [Synechococcus sp. CC9902] Length = 121 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG ++ I K + P+ RV L + ++ ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDIQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|330850864|ref|YP_004376614.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580] gi|328835684|dbj|BAK18980.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580] Length = 123 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ L YIHGIG S++ I I E RV+ L + +RQ + Sbjct: 1 MVRLVGVDLPRNKKITYGLTYIHGIGLTSAKKIVELTNIDSETRVNDLTPEQAGLLRQTL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E+ D Q+EGDLRR +NIKRL ++ C+RG RHR LPVRGQ Sbjct: 61 EESDLQLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQ 102 >gi|215447798|ref|ZP_03434550.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] gi|289759623|ref|ZP_06519001.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] gi|289715187|gb|EFD79199.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] Length = 100 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/100 (50%), Positives = 68/100 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRG Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRG 100 >gi|94502227|ref|ZP_01308713.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833839|ref|YP_001598035.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS] gi|189044303|sp|A8Z688|RS13_SULMW RecName: Full=30S ribosomal protein S13 gi|94451198|gb|EAT14137.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206329|gb|ABS30639.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS] Length = 126 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 73/111 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA ++G+ IP K + AL YI GIG +S+ I I +V + ++ +IR+ I Sbjct: 1 MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVINWSDEDINKIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + ++EG+LR + ++IKR++++GCYRG+RHR GLPVRGQ+T N RTRK Sbjct: 61 SSNIRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111 >gi|300782635|ref|YP_003762926.1| 30S ribosomal protein S13 [Amycolatopsis mediterranei U32] gi|299792149|gb|ADJ42524.1| small subunit ribosomal protein S13 [Amycolatopsis mediterranei U32] Length = 112 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/94 (51%), Positives = 67/94 (71%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL YI+GIG S+ + + + RV L + ++ ++R IE++++VEGDLRR V + Sbjct: 4 ALTYIYGIGRTRSKQLIKAAELNADTRVKDLSDDDLAKLRVYIEENFKVEGDLRREVNAD 63 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 I+R +++GCY GLR RRGLPVRGQRT TNARTRK Sbjct: 64 IRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRK 97 >gi|242624285|ref|YP_003002203.1| 30S ribosomal protein S13 [Aureoumbra lagunensis] gi|239997393|gb|ACS36915.1| 30S ribosomal protein S13 [Aureoumbra lagunensis] Length = 116 Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 65/101 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P +KRV AL I+GIG SS+ I I P +R+H L + E+ +R I Sbjct: 1 MVRIAGVDLPNSKRVEYALTSIYGIGLTSSRSILAAANIDPNKRMHTLEDQELSVLRAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +Y+VE DLRR + NI RL + C RG RHR LPVRGQ Sbjct: 61 EDNYKVEDDLRRLIKQNIVRLSQINCVRGRRHRASLPVRGQ 101 >gi|240047281|ref|YP_002960669.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae HRC/581] gi|239984853|emb|CAT04843.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae] Length = 137 Score = 100 bits (250), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 14/124 (11%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47 MARI + IP KR+V AL I+GIG + +I K I + +V Sbjct: 1 MARILNIEIPNNKRIVIALTSIYGIGRSLASEIVAKTQLVQKEKFANQYPLITEDTKVKD 60 Query: 48 LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 L E +++ I + I ++Y+ EGDLRR+V +IKRL+++ CYRG+RHR+GLPVRGQ T NA Sbjct: 61 LNE-DILHIIRDIAKEYKTEGDLRRSVQTDIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119 Query: 108 RTRK 111 RTRK Sbjct: 120 RTRK 123 >gi|189095415|ref|YP_001936428.1| ribosomal protein S13 [Heterosigma akashiwo] gi|157694758|gb|ABV66034.1| 30S ribosomal protein S13 [Heterosigma akashiwo] gi|157777989|gb|ABV70175.1| 30S ribosomal protein S13 [Heterosigma akashiwo] Length = 122 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 44/101 (43%), Positives = 68/101 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P K+++ +L ++GIG +++ I K + E R +L + V IR + Sbjct: 1 MVRIAGVDLPSQKKILYSLTAVYGIGLHTAKKILEKAKVDSEIRTFELDDDSVGNIRSVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +Y VEGDLR+ ++NI RL+ + C+RG RHR+GLP+RGQ Sbjct: 61 EDNYTVEGDLRKLKSLNINRLVSINCFRGKRHRQGLPLRGQ 101 >gi|260895671|ref|ZP_05904167.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466] gi|308089500|gb|EFO39195.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466] Length = 90 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRH 92 I ++ I + ++ +L E ++ Q+R + + Y VEGDLRR V+MNIKRLMDLGCYRGLRH Sbjct: 5 ILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMNIKRLMDLGCYRGLRH 63 Query: 93 RRGLPVRGQRTHTNARTRK 111 RR LP+RGQRT TNARTRK Sbjct: 64 RRSLPLRGQRTKTNARTRK 82 >gi|255022693|ref|ZP_05294679.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-208] Length = 111 Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 49/104 (47%), Positives = 73/104 (70%), Gaps = 1/104 (0%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 L YI+GIG ++++++ + + + R L E E+ +IR+ +++ +VEGDLRR V +NI Sbjct: 9 LTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDR-IKVEGDLRREVNLNI 67 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 KRL+++G YRG+RHRRGLPVRGQ T NARTRK K +K+ Sbjct: 68 KRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK 111 >gi|224066873|ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1| unknown [Populus trichocarpa] gi|222843982|gb|EEE81529.1| predicted protein [Populus trichocarpa] Length = 168 Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 4/111 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60 AR+ GV IP +KRV +L YIHGIG +++ I + L++ E ++ + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSM--ENKITKDLSEEELIILRDEV 104 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 105 SK-YTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 154 >gi|33866620|ref|NP_898179.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102] gi|81573912|sp|Q7U4H9|RS13_SYNPX RecName: Full=30S ribosomal protein S13 gi|33633398|emb|CAE08603.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102] Length = 121 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+G+G ++ I + + P+ RV L + ++ ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGVGPTRARTILAQTGVSPDIRVKDLEDGDLQKLRNAA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + D+ +EGDLRR M +KRL D+GC RG RHR LPVRGQ Sbjct: 61 D-DFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100 >gi|224082224|ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1| predicted protein [Populus trichocarpa] Length = 168 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 4/111 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60 AR+ GV IP +KRV +L YIHGIG ++ I + L + E ++ + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTM--ENKITKDLSEDELITLRDEV 104 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 105 SK-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 154 >gi|229328281|ref|YP_002860257.1| ribosomal protein S13 [Megaceros aenigmaticus] gi|192282181|gb|ACF03810.1| ribosomal protein S13 [Nothoceros aenigmaticus] Length = 122 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 73/113 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N K++ AL I GIG K + +C +L + RV++L ++ +I + I Sbjct: 1 MSYILGTNSISNKQIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKILKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L+ + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T ++F Sbjct: 61 SQNYLVDSELKAVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113 >gi|307069672|ref|YP_003878149.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola CARI] gi|306482932|gb|ADM89803.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola CARI] Length = 135 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG+N+P K + +L I GIG S+ IC I ++ L ++E+ +IR+ I Sbjct: 2 IIRIAGINLPINKNIYISLTKIFGIGINISKKICKVNNIDINKKTKNLNDNELSKIRKEI 61 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + Y +EG+L+R + +NIKRL+D+ YRG+RH LPVRGQRT TNA+T Sbjct: 62 YK-YSIEGELKREIFINIKRLIDIKSYRGIRHILKLPVRGQRTRTNAKT 109 >gi|300870625|ref|YP_003785496.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000] gi|300688324|gb|ADK30995.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000] Length = 129 Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 4/121 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV I KR+ AL I+GIG + IC+K I + L ++++ +R AI Sbjct: 1 MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLR + NIKRL D+ YRG+RH + LPVRGQRT TN+R +GG AR Sbjct: 61 EATTKVEGDLRTELFNNIKRLKDIHSYRGMRHIKRLPVRGQRTRTNSRN----ARGGGAR 116 Query: 121 K 121 K Sbjct: 117 K 117 >gi|308072481|dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis] Length = 150 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 51/114 (44%), Positives = 75/114 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G + ++V AL I GIG K + +C +L I +V++L + ++ QI Q I Sbjct: 1 MSYILGARLVPNEQVRIALTKIDGIGPKKATRVCYRLGISDNIKVNELTKYQIDQIEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +KFG Sbjct: 61 GQDHVVHWELKRGKRADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKFG 114 >gi|284794742|ref|YP_003412095.1| ribosomal protein S13 [Phaeoceros laevis] gi|254596062|gb|ACT75303.1| ribosomal protein S13 [Phaeoceros laevis] Length = 122 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 72/113 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N K + AL I GIG K + +C +L + RV++L ++ +I + I Sbjct: 1 MSYILGTNSISNKLIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKIIKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L+ + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T ++F Sbjct: 61 SQNYLVDSELKTVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113 >gi|168054032|ref|XP_001779437.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669122|gb|EDQ55715.1| predicted protein [Physcomitrella patens subsp. patens] Length = 128 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 4/111 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60 AR+ GV IP KRV AL YIHG+G +S+ I L + E ++ +L E E+ +R + Sbjct: 6 ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQIL--LDVGLENKITKELSEEELTSLRDEV 63 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR + IKRL D+ CYRG RH GLP RGQ T NARTR+ Sbjct: 64 SK-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRR 113 >gi|168054034|ref|XP_001779438.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669123|gb|EDQ55716.1| predicted protein [Physcomitrella patens subsp. patens] Length = 141 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 4/111 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60 AR+ GV IP KRV AL YIHG+G +S+ I L + E ++ +L E E+ +R + Sbjct: 19 ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQIL--LDVGLENKITKELSEEELTSLRDEV 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR + IKRL D+ CYRG RH GLP RGQ T NARTR+ Sbjct: 77 SK-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRR 126 >gi|255630109|gb|ACU15408.1| unknown [Glycine max] Length = 162 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 6/112 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIG-FKSSQDICNKLAIPPERRV-HQLVESEVIQIRQA 59 R+ GV IP KR+ +L YIHG+G ++ Q +C+ I + ++ +L E E+I +R Sbjct: 43 VRVGGVEIPNNKRIEYSLQYIHGVGRTRAKQILCD---IQMDNKITKELTEEELITLRDE 99 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + Y +EGDLRR A+NIKRL D+ CYRG+RH +GLP RGQRT N RT K Sbjct: 100 VSK-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLK 150 >gi|255545528|ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis] gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13, putative [Ricinus communis] Length = 290 Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G ++ I + L++ + +L E E+I +R + Sbjct: 169 ARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSME-NKITKELSEEELITLRDEVS 227 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 228 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 276 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL +I GIG + + I L++ +R L E+ +R + + Sbjct: 37 RVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLE-NKRTKDLTGLELHTLRNEVSK 95 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y + +L R V +I+RL D+ CYRG H LP RGQ T TNARTRK Sbjct: 96 -YLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRK 143 >gi|242620059|ref|YP_003002063.1| 30S ribosomal protein S13 [Aureococcus anophagefferens] gi|239997304|gb|ACS36827.1| 30S ribosomal protein S13 [Aureococcus anophagefferens] Length = 116 Score = 97.1 bits (240), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 45/101 (44%), Positives = 68/101 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+G+++P +KR+ AL ++GIG +S+ I I P +R + L ++EV+ +R+ I Sbjct: 1 MVRISGIDLPNSKRIEYALTSVYGIGLTTSRSILAVADIDPSKRTNVLGDTEVMALREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E++Y+VE DLRR NI RL + C +G RHR+ LPVRGQ Sbjct: 61 EENYKVEEDLRRQTKQNIVRLSQINCVKGRRHRQNLPVRGQ 101 >gi|225459459|ref|XP_002285833.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302141873|emb|CBI19076.3| unnamed protein product [Vitis vinifera] Length = 167 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 4/111 (3%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60 AR+ GV IP +KRV +L YIHGIG S+ I L + E ++ + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGM--ENKITKDLSEEELITLRDEV 104 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR A+ I+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 105 SK-YMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 154 >gi|296126888|ref|YP_003634140.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563] gi|296018704|gb|ADG71941.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563] Length = 129 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 4/121 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV I KR+ AL I+GIG + IC+K I + L ++++ +R AI Sbjct: 1 MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLR + NIKRL D+ YRG+RH + LPV GQRT TN+R +GG AR Sbjct: 61 EATTKVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRN----ARGGGAR 116 Query: 121 K 121 K Sbjct: 117 K 117 >gi|330318670|gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis] Length = 165 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 R+ GV IP KR+ +L YIHGIG +S+ I L++ + L E E+I R + Sbjct: 44 VRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMD-NKITKDLFEEELISFRDQVS 102 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGD RR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 103 K-YMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 151 >gi|162279916|ref|NP_064014.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|323435141|ref|YP_004222359.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|87248054|gb|ABD36081.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|148491419|dbj|BAA99325.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|317905591|emb|CBJ14001.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|319439874|emb|CBJ17577.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|320148028|emb|CBJ20692.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] Length = 116 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIALTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116 >gi|91208878|ref|YP_539039.1| ribosomal protein S13 [Physcomitrella patens] gi|90991418|dbj|BAE93110.1| ribosomal protein S13 [Physcomitrella patens] gi|328775215|gb|AEB40003.1| ribosomal protein S13 [Funaria hygrometrica] Length = 122 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 75/112 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ ++V AL I G+G K + +C++L + +V++L + ++ +I + I Sbjct: 1 MSYILGTNLVPNEQVEIALTRIFGLGPKKAIQVCDQLGLNDNIKVNKLTKYQIDRIIKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q+Y V+ +L R + +IK+LM +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDLELARVIQRDIKQLMSIGCYRGFRHNAGLPLRGQRTHTNAKTCRK 112 >gi|313200103|ref|YP_004038761.1| 30S ribosomal protein S13 [Methylovorus sp. MP688] gi|312439419|gb|ADQ83525.1| ribosomal protein S13 [Methylovorus sp. MP688] Length = 86 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++ L ++EV ++R + + +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT Sbjct: 10 KIKDLNDAEVEKLRDEVAK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRT 68 Query: 104 HTNARTRK 111 TNARTRK Sbjct: 69 KTNARTRK 76 >gi|321268739|gb|ADW79188.1| ribosomal protein S13 [Cyanophora paradoxa] Length = 115 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 67/109 (61%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 I GV +P V L I G+G ++ ICN L I P +V QL +++I++ Q IE + Sbjct: 3 ILGVFLPLDDYVFAGLQKIFGVGKFRAKKICNALLITPFYKVKQLNRNQIIRLSQYIENN 62 Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Y V DL+ + N K L+ + YRG+RH LPVRGQRTHTN++T+KK Sbjct: 63 YNVGIDLQNQIKSNFKNLVKISSYRGIRHTLKLPVRGQRTHTNSQTKKK 111 >gi|255627531|gb|ACU14110.1| unknown [Glycine max] Length = 162 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 6/112 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIG-FKSSQDICNKLAIPPERRV-HQLVESEVIQIRQA 59 R+ GV IP KR+ +L +IHG+G ++ Q +C+ I + ++ +L E E+I +R Sbjct: 43 VRVGGVEIPNNKRIEYSLQHIHGVGRTRAKQILCD---IQMDNKITKELTEEELITLRDE 99 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + Y +EGDLRR A+NIKRL D+ CYRG+RH +GLP RGQRT N RT K Sbjct: 100 VSK-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLK 150 >gi|169635170|gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2 [Arachis diogoi] Length = 121 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I +++ + L E E+I +R + Sbjct: 2 ARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMD-NKVTKDLSEEELITLRDEVS 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K Sbjct: 61 K-YVIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 109 >gi|295311703|ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo] gi|259156831|gb|ACV96692.1| ribosomal protein S13 [Cucurbita pepo] Length = 116 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/112 (44%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL I GIG K + +C +L I ++ +L +S++ QI Q I Sbjct: 1 MPYISGARLVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R++ L CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHIVHWELKRGERADIERVISLSCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|94502651|ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays] gi|40795090|gb|AAR91134.1| ribosomal protein S13 [Zea mays] Length = 116 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++H+L + ++ QI Q I Sbjct: 1 MLYISGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARK 112 >gi|321310956|ref|YP_004193285.1| 30S ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1] gi|319802800|emb|CBY93446.1| ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1] Length = 155 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 30/141 (21%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI-----------CNKLAIPPE------- 42 M RI GV+IP K + AL I+G+GF +S+ I NKL+ + Sbjct: 1 MPRILGVDIPNNKTLYAALTSIYGVGFSTSRKIIQKAFFNEIKPLNKLSKKEKGELDKVL 60 Query: 43 -RRVHQLVESEVIQIRQAI-----------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90 RV L + + I Q I ++ EGDLR+ V+ NIK L+++ CY G+ Sbjct: 61 RMRVKDLTKDNLSTISQTILNLQNNEEKYIYHEFLFEGDLRKKVSDNIKNLVEINCYVGI 120 Query: 91 RHRRGLPVRGQRTHTNARTRK 111 RH+RGLPVRGQRT TNARTRK Sbjct: 121 RHKRGLPVRGQRTRTNARTRK 141 >gi|302757637|ref|XP_002962242.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii] gi|300170901|gb|EFJ37502.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii] Length = 163 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G +++ I A+ +R L ++E+ +IR + Sbjct: 41 ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 99 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + Y +EGDLRR + I L+++ CYRG RH+ GLPVRGQRT NARTR Sbjct: 100 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 147 >gi|293453617|ref|ZP_06664036.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088] gi|291321743|gb|EFE61174.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088] Length = 85 Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%) Query: 38 AIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLP 97 I + ++ +L E ++ +R + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLP Sbjct: 5 GIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLP 63 Query: 98 VRGQRTHTNARTRK 111 VRGQRT TNARTRK Sbjct: 64 VRGQRTKTNARTRK 77 >gi|302763467|ref|XP_002965155.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii] gi|300167388|gb|EFJ33993.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii] Length = 166 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G +++ I A+ +R L ++E+ +IR + Sbjct: 44 ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 102 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + Y +EGDLRR + I L+++ CYRG RH+ GLPVRGQRT NARTR Sbjct: 103 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 150 >gi|326625162|gb|EGE31507.1| Ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 85 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++ +L E ++ +R + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT Sbjct: 11 KISELSEEQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT 69 Query: 104 HTNARTRK 111 TNARTRK Sbjct: 70 KTNARTRK 77 >gi|207092547|ref|ZP_03240334.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_AG0C1] Length = 76 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 44/67 (65%), Positives = 52/67 (77%) Query: 45 VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 +H+L E EV I + I+Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T Sbjct: 1 MHELSEDEVSSIAKKIQQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTK 60 Query: 105 TNARTRK 111 NARTRK Sbjct: 61 NNARTRK 67 >gi|159792882|gb|ABW98661.1| ribosomal protein S13 [Malus x domestica] Length = 116 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|110225647|ref|YP_665653.1| ribosomal protein S13 [Nephroselmis olivacea] gi|6066162|gb|AAF03180.1|AF110138_12 ribosomal protein S13 [Nephroselmis olivacea] Length = 125 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M IA + + ++V AL I+GIG + IC++L + P ++ QL ++V Q+ + Sbjct: 1 MTTIANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q Y L+RT+ ++ RL+ + CYRG R+ + LPVRGQRTHTNA+T +K Sbjct: 61 SQSYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQRTHTNAKTARK 112 >gi|54606697|dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|54606741|dbj|BAD66764.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] Length = 116 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V A I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116 >gi|163752124|ref|ZP_02159329.1| 30S ribosomal protein S13 [Shewanella benthica KT99] gi|161327959|gb|EDP99134.1| 30S ribosomal protein S13 [Shewanella benthica KT99] Length = 71 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 1/64 (1%) Query: 48 LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + E+++ +R+A+ + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNA Sbjct: 1 MSEAQIDILREAVAE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNA 59 Query: 108 RTRK 111 RTRK Sbjct: 60 RTRK 63 >gi|215400753|ref|YP_002327514.1| ribosomal protein S13 [Vaucheria litorea] gi|194441203|gb|ACF70931.1| ribosomal protein S13 [Vaucheria litorea] Length = 126 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 71/105 (67%), Gaps = 4/105 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56 M R+ G+++P+ K + AL I+GIG +++I +K+ + + +V L ++ + + Sbjct: 1 MVRLIGIDLPKGKYINYALTSIYGIGISRAEEILSKIGLDKFSIKKLKVEDLSDTNISAL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 R+ +E +YQ+EGDLRR ++N+KRLM++G +G RHR GLPVRGQ Sbjct: 61 RKILEDEYQLEGDLRRLKSLNLKRLMEIGSIKGRRHRVGLPVRGQ 105 >gi|295311659|ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi|259156787|gb|ACV96649.1| ribosomal protein S13 [Citrullus lanatus] Length = 116 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G K+V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|11830847|emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana] Length = 116 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|41469448|gb|AAS07249.1| putative 30S ribosomal protein S13 [Oryza sativa Japonica Group] gi|108710647|gb|ABF98442.1| 30S ribosomal protein S13, putative, expressed [Oryza sativa Japonica Group] gi|164375541|gb|ABY52938.1| chloroplast 30S ribosomal protein S13 precursor [Oryza sativa Japonica Group] gi|222625639|gb|EEE59771.1| hypothetical protein OsJ_12269 [Oryza sativa Japonica Group] Length = 171 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EGDL+R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 154 >gi|316996011|dbj|BAD83467.2| ribosomal protein S13 [Nicotiana tabacum] Length = 116 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 72/113 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKL 113 >gi|47570247|ref|ZP_00240898.1| ribosomal protein S13p/S18e [Bacillus cereus G9241] gi|47553071|gb|EAL11471.1| ribosomal protein S13p/S18e [Bacillus cereus G9241] Length = 97 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 1/82 (1%) Query: 30 SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89 ++ I + I E RV L E E+ +IR I++ +VEGDLRR V++NIKRLM++G YRG Sbjct: 6 AEKILAEAGISEETRVRDLTEDELGRIRDIIDR-IKVEGDLRREVSLNIKRLMEIGSYRG 64 Query: 90 LRHRRGLPVRGQRTHTNARTRK 111 LRHRRGLPVRGQ + NARTRK Sbjct: 65 LRHRRGLPVRGQNSKNNARTRK 86 >gi|307103900|gb|EFN52157.1| hypothetical protein CHLNCDRAFT_27099 [Chlorella variabilis] Length = 135 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI GV +P K V +L YI GIG +++ I + +R L E E+ ++R+ ++ Sbjct: 6 ARIGGVEVPNQKYVEYSLQYIFGIGHTTAKAILVTTGVE-NKRTKDLSEEELTRLREEVD 64 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y VEGDLRR A+NIKRL ++GCYRG RH LPVRGQRT NARTRK Sbjct: 65 R-YTVEGDLRRFNALNIKRLKEIGCYRGRRHYNNLPVRGQRTKNNARTRK 113 >gi|24636948|gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna] Length = 116 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|323398665|ref|YP_004222740.1| ribosomal protein S13 [Glaucocystis nostochinearum] gi|321401358|gb|ADW83112.1| ribosomal protein S13 [Glaucocystis nostochinearum] Length = 116 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 69/113 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +P +K+V +L I+GI K + IC+KL ++ +L ++ + Q + Sbjct: 1 MLYILGFFLPSSKKVRYSLTSIYGINKKLTNKICSKLLFHNNLKIKELTAECILLLTQEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++ Y + L+++V NI L+ + YRG+RH G PVRGQRTHTN++T+K+F Sbjct: 61 DKHYLIGSKLKKSVFDNINCLIKINSYRGIRHSLGYPVRGQRTHTNSKTKKRF 113 >gi|218193603|gb|EEC76030.1| hypothetical protein OsI_13197 [Oryza sativa Indica Group] Length = 171 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +EGDL+R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 154 >gi|22550356|ref|NP_689356.1| ribosomal protein S13 [Chaetosphaeridium globosum] gi|22417022|gb|AAM96621.1|AF494279_26 ribosomal protein S13 [Chaetosphaeridium globosum] Length = 122 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 41/96 (42%), Positives = 65/96 (67%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL ++GIG + IC+ L + P +V+QL + ++ + I ++ +E +L+R V + Sbjct: 22 ALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELELKRIVQTD 81 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 I+RL+ +GCYRGLRH GLP+RGQRTHTNA+T ++ Sbjct: 82 IRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRL 117 >gi|24636952|gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus] Length = 116 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 72/112 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V + RR +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWEWRRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|11465441|ref|NP_045168.1| ribosomal protein S13 [Cyanidium caldarium] gi|32363435|sp|Q9TLV0|RR13_CYACA RecName: Full=30S ribosomal protein S13, chloroplastic gi|6466344|gb|AAF12926.1|AF022186_48 unknown [Cyanidium caldarium] Length = 122 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 65/101 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +P KRV AL YI+GIG S+ I +L + RV L+ E+ IR+ I Sbjct: 1 MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E++Y VE DLRR +NIKRL+++ Y+G RH+ LPVRGQ Sbjct: 61 ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQ 101 >gi|194033240|ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|60498746|dbj|BAC19882.2| Ribosomal protein S13 [Oryza sativa Japonica Group] Length = 116 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/113 (41%), Positives = 72/113 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARKL 113 >gi|134059|sp|P23209|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial Length = 116 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 72/112 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL ++GIG K + +C +L I ++ +L + ++ Q+ Q I Sbjct: 1 MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|226500900|ref|NP_001149618.1| LOC100283244 [Zea mays] gi|195628536|gb|ACG36098.1| 30S ribosomal protein S13 [Zea mays] Length = 170 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 5/121 (4%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKXVGK 105 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK-GGVARK 121 Y +EGDL+R + I+RL ++ CY+G+RH+ GLPVRGQRT N RT K GK VA+K Sbjct: 106 -YMIEGDLKRFNRVAIERLKEIRCYKGIRHKLGLPVRGQRTKNNCRTLK--GKRASVAKK 162 Query: 122 R 122 + Sbjct: 163 K 163 >gi|18417346|ref|NP_568299.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis thaliana] gi|1173194|sp|P42732|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] gi|662869|emb|CAA88028.1| chloroplast ribosomal protein S13 [Arabidopsis thaliana] gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13 [Arabidopsis thaliana] gi|1515107|emb|CAA60413.1| plastid ribosomal protein S13 [Arabidopsis thaliana] gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110 [Arabidopsis thaliana] gi|15450549|gb|AAK96452.1| AT5g14320/F18O22_110 [Arabidopsis thaliana] gi|332004633|gb|AED92016.1| 30S ribosomal protein S13 [Arabidopsis thaliana] Length = 169 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I L + + + E E+I +R + Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQME-NKITKDMAEEELIILRDEVS 106 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + Y +EGDLRR A+ IKRL ++ CYRG+RH +GLP RGQRT N RT Sbjct: 107 K-YMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153 >gi|116784057|gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR16636.1| unknown [Picea sitchensis] gi|224284072|gb|ACN39773.1| unknown [Picea sitchensis] Length = 169 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP K++ +L YIHGIG +++ + L + + +L ESE+ ++R + Sbjct: 48 ARVGGVEIPNNKKIEYSLQYIHGIGRTTARQVLYDLGME-NKVTRELNESELTRVRDEVS 106 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR + I+RL+++ CYRG RH GLP RGQRT N RT K Sbjct: 107 K-YMIEGDLRRFNNLAIRRLIEIQCYRGRRHVAGLPCRGQRTKNNCRTLK 155 >gi|225621049|ref|YP_002722307.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1] gi|225215869|gb|ACN84603.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1] Length = 125 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 4/116 (3%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 GV I KR+ AL I+GIG + IC+K I + L ++++ +R AIE + Sbjct: 2 GVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATTK 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 VEGDLR + NIKRL D+ YRG+RH + LPV GQRT TN+R +GG ARK Sbjct: 62 VEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRN----ARGGGARK 113 >gi|24636950|gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata] Length = 116 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++ ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGASLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|254571277|ref|XP_002492748.1| Putative mitochondrial ribosomal protein of the small subunit [Pichia pastoris GS115] gi|238032546|emb|CAY70569.1| Putative mitochondrial ribosomal protein of the small subunit [Pichia pastoris GS115] Length = 121 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +G+G +++Q +C+KL P R+HQL E +V+ I + + D +EG LR V NI+ Sbjct: 24 FYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKELS-DLTIEGKLRSVVRENIQLK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y GLRH GLPVRGQRT TNA+T KK K Sbjct: 83 RTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 116 >gi|150406483|ref|YP_001315132.1| ribosomal protein S13 [Chlorokybus atmophyticus] gi|126507720|gb|ABO15117.1| ribosomal protein S13 [Chlorokybus atmophyticus] Length = 121 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ ++ K++ AL + GIG S IC++L V QL +S++ ++ + + Sbjct: 1 MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKGGVA 119 Q Y +LRR ++ +IKR + +GCYRG RH LP+RGQRTH+NART RK+ + A Sbjct: 61 NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRKRLNRSTYA 120 Query: 120 R 120 R Sbjct: 121 R 121 >gi|328353244|emb|CCA39642.1| 30S ribosomal protein S13 [Pichia pastoris CBS 7435] Length = 165 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +G+G +++Q +C+KL P R+HQL E +V+ I + + D +EG LR V NI+ Sbjct: 68 FYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKELS-DLTIEGKLRSVVRENIQLK 126 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y GLRH GLPVRGQRT TNA+T KK K Sbjct: 127 RTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 160 >gi|326522883|dbj|BAJ88487.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 171 Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 4/111 (3%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAIE 61 RI GV IP KRV AL IHGIG ++ I ++L + E +V + L + E++ +R+ I Sbjct: 61 RIGGVVIPNDKRVEYALQSIHGIGRARARQILSELNL--ENKVTKDLSKEEIMALREGIA 118 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + Y +E DLRR + ++RL + CYRG+RH LPVRGQRT TN RTRK+ Sbjct: 119 K-YMIEADLRRFKSAAVERLEGIRCYRGIRHADALPVRGQRTKTNGRTRKE 168 >gi|169602162|ref|XP_001794503.1| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15] gi|160706096|gb|EAT89165.2| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15] Length = 163 Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G N A V R+L GIG K SQ + K I P +V L + V+++ + Sbjct: 1 MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++E DLRR V NI+RL D+G YRG RH GLPVRGQRT T T +K KG R Sbjct: 61 S-NMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNKGRTRR 119 Query: 121 KR 122 R Sbjct: 120 PR 121 >gi|213024276|ref|ZP_03338723.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 65 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/48 (85%), Positives = 45/48 (93%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 10 FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 57 >gi|329907621|ref|ZP_08274691.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium IMCC9480] gi|327546926|gb|EGF31835.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium IMCC9480] Length = 69 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 41/48 (85%), Positives = 44/48 (91%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 11 FVVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRK 58 >gi|282931915|ref|ZP_06337387.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|282932825|ref|ZP_06338225.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|281303054|gb|EFA95256.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|281303967|gb|EFA96097.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] Length = 86 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRH 92 IC + + R L + ++R +++ Y+VEGDLRR ++MNIKRL+D+G YRG+RH Sbjct: 3 ICADAGVSEDIRSKDLTPEDQEKLRAEVDK-YRVEGDLRREISMNIKRLVDIGSYRGVRH 61 Query: 93 RRGLPVRGQRTHTNARTRK 111 RRGLPVRGQ T NARTRK Sbjct: 62 RRGLPVRGQNTKNNARTRK 80 >gi|253807635|gb|ACT36213.1| ribosomal protein S13 [Helicosporidium sp. ex Simulium jonesi] Length = 127 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 65/115 (56%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I VN +K++ +AL I+GIG S IC+ L + P + ++ + Q I Sbjct: 1 MTYINNVNCSNSKKLYKALTKIYGIGTHHSLQICDSLGLCPHTLLGDCSPQQISSLSQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +Y ++RR + N+++ + + CYRG RH +GLPVRGQRT +N +T +K + Sbjct: 61 TSNYDTGVEIRRNIKENVQKYIKMACYRGFRHAQGLPVRGQRTRSNHKTVRKLSR 115 >gi|19075537|ref|NP_588037.1| mitochondrial ribosomal protein subunit S37 (predicted) [Schizosaccharomyces pombe 972h-] gi|74654640|sp|O59772|SWS2_SCHPO RecName: Full=37S ribosomal protein subunit sws2, mitochondrial gi|3080512|emb|CAA18642.1| mitochondrial ribosomal protein subunit S37 (predicted) [Schizosaccharomyces pombe] Length = 151 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV + K V AL +GIG +++IC KL+ RV +L ++ + Q + Sbjct: 1 MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +EGDLRR +I RL+++ CYRG+RH GLPV GQ T TNA+T KK K Sbjct: 61 S-GMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNK 114 >gi|213422185|ref|ZP_03355251.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 90 Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91 + + VEGDLRR ++M+IKRLMDLGCYRGLR Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLR 90 >gi|11497468|ref|NP_042258.1| ribosomal protein S13 [Prototheca wickerhamii] gi|1173316|sp|P46747|RT13_PROWI RecName: Full=Ribosomal protein S13, mitochondrial gi|467859|gb|AAD12646.1| ribosomal protein S13 [Prototheca wickerhamii] Length = 119 Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 65/113 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I ++ K++ +A I+G+G IC+ L + PE R+ L + + Q I Sbjct: 1 MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y D+RR NI+RL+++ YRG RH +GLPVRGQR+H NART +K Sbjct: 61 TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKL 113 >gi|56791641|gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson 0301] Length = 107 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/92 (44%), Positives = 63/92 (68%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 +L I+GIG K + +C +L I ++ +L + ++ Q+ Q I QD+ V +L+R + Sbjct: 14 SLTKIYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMIGQDHVVHWELKRGERAD 73 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 I+RL+ + CYRG+RH+ GLP+RGQRTHTNART Sbjct: 74 IERLISISCYRGIRHQDGLPLRGQRTHTNART 105 >gi|253795633|ref|YP_003038729.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia cicadicola Dsem] gi|253739941|gb|ACT34276.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia cicadicola Dsem] Length = 118 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/105 (45%), Positives = 63/105 (60%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 + +P K+V AL +HG+G + + LA+P R QL + I + +E + V Sbjct: 1 MELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVV 60 Query: 67 EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 EG LR V +I +L +GCYRGLRHR GLPVRGQRT TNA TRK Sbjct: 61 EGGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105 >gi|194397653|ref|YP_002036933.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54] gi|194357320|gb|ACF55768.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54] Length = 101 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%) Query: 27 FKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGC 86 +S+ I I + RV L + IR+ ++ +VEGDLRR V +NIKRLM++G Sbjct: 7 LATSKKILAAAGISEDVRVRDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGS 65 Query: 87 YRGLRHRRGLPVRGQRTHTNARTRK 111 YRG+RHRRGLPVRGQ T NARTRK Sbjct: 66 YRGIRHRRGLPVRGQNTKNNARTRK 90 >gi|116335040|ref|YP_802535.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV] gi|123025707|sp|Q05FK2|RS13_CARRP RecName: Full=30S ribosomal protein S13 gi|116235321|dbj|BAF35169.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV] Length = 118 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 I GV I + K +V L I+GIG+ S IC+K+ ++ L E +I I + Sbjct: 5 ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINK- 63 Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 VE +L+ + N K+ ++L Y+ LRH++ LP RGQRT TNA+TRKK Sbjct: 64 INVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMN 114 >gi|312218573|emb|CBX98518.1| similar to 30S ribosomal protein S13 [Leptosphaeria maculans] Length = 125 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 4/123 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + A V R+L GIG K SQ I K I P ++V L S V+++ + + Sbjct: 1 MVFINGFSFTEATLVKRSLESFFGIGPKVSQKIMAKFYIHPWQKVGSLKNSTVLELTEEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH---TNARTRKKFGKGG 117 + ++E DLRR V +I+RL D+G YRG RH GLPVRGQRT T AR + +GG Sbjct: 61 -TNMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQRTRTQITTARRLNRMERGG 119 Query: 118 VAR 120 R Sbjct: 120 TGR 122 >gi|325989735|ref|YP_004249434.1| 30S ribosomal protein S13 [Mycoplasma suis KI3806] gi|323574820|emb|CBZ40480.1| 30S ribosomal protein S13 [Mycoplasma suis] Length = 162 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 36/147 (24%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41 MARI GV +P K + AL I+GIG +S+ I +KL + Sbjct: 1 MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTESEKSKLEVYM 60 Query: 42 ERRVHQLVESEVIQIRQAIE--QDYQ---------------VEGDLRRTVAMNIKRLMDL 84 ++RV+ L E+ + QAI Q Q +EGDLR+ ++ ++ L ++ Sbjct: 61 KKRVYSLSSEELASLSQAIVKLQSIQEEIPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120 Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y GLRHRR LPV GQRT TNARTRK Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRK 147 >gi|224066875|ref|XP_002302257.1| predicted protein [Populus trichocarpa] gi|222843983|gb|EEE81530.1| predicted protein [Populus trichocarpa] Length = 163 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL YIHGIG K + I +L++ + L E+ +R+ + + Sbjct: 33 RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSLV-NKPTKDLTGIELNSLREEVSK 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Y DL R V +++RL+D+ CYRG RH GLP RGQRT TNARTRK+ K G Sbjct: 92 -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145 >gi|118488715|gb|ABK96168.1| unknown [Populus trichocarpa] Length = 163 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL YIHGIG K + I +L++ + L E+ +R+ + + Sbjct: 33 RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSLV-NKPTKDLTGIELNSLREEVSK 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Y DL R V +++RL+D+ CYRG RH GLP RGQRT TNARTRK+ K G Sbjct: 92 -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145 >gi|325973299|ref|YP_004250363.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois] gi|323651901|gb|ADX97983.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois] Length = 162 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 36/147 (24%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41 MARI GV +P K + AL I+GIG +S+ I +KL + Sbjct: 1 MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTEAEKSKLEVYM 60 Query: 42 ERRVHQLVESEVIQIRQAIE--QDYQ---------------VEGDLRRTVAMNIKRLMDL 84 ++RV+ L E+ + QAI Q Q +EGDLR+ ++ ++ L ++ Sbjct: 61 KKRVYSLSSEELASLSQAIVKLQSIQEEVPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120 Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y GLRHRR LPV GQRT TNARTRK Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRK 147 >gi|289807631|ref|ZP_06538260.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 88 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89 + + VEGDLRR ++M+IKRLMDLGCYRG Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRG 88 >gi|24636943|gb|AAN63484.1|AF314106_1 ribosomal protein S13 [Spiranthes spiralis] Length = 116 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++H+L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIHELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|269991338|emb|CAX12522.1| 30S ribosomal protein S13 [Fucus vesiculosus] Length = 126 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56 M R G ++ K++ AL I+GIG +++I + RV L + E+ + Sbjct: 1 MVRFLGRDLTNNKKIKYALTTIYGIGLSRAKEILESAGLTNIDQMGTRVKDLSDEEISNL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 R+ +E++YQ+EGDL R +NIKRLM+ G +G RHR GLPVRGQ Sbjct: 61 RKVLEKNYQLEGDLVRITNLNIKRLMENGSIKGRRHRAGLPVRGQ 105 >gi|585936|sp|P38017|RS13_MYCSP RecName: Full=30S ribosomal protein S13 gi|625803|pir||C49923 ribosomal protein S13 - Chlamydia trachomatis gi|385203|gb|AAA16205.1| S13 [Chlamydia muridarum] Length = 119 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 3/111 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ + IP K+ +L YI GIG ++ I + E+RV +L E E+ +IR Sbjct: 1 MARVLNIEIPNNKKARISLTYIFGIGPTIAKQILADANVDGEKRVKELTEEELTRIRDEA 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++ Y EGDL+R + +NIKRLM++ YR +RHR+ R T NARTRK Sbjct: 61 KK-YTTEGDLKREINLNIKRLMEIKSYRVIRHRKDTCKRS--TKKNARTRK 108 >gi|323649892|ref|YP_004237265.1| ribosomal protein S13 [Ricinus communis] gi|322394272|gb|ADW96029.1| ribosomal protein S13 [Ricinus communis] Length = 116 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 71/113 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG K + + +L I ++ +L + ++ ++ Q I Sbjct: 1 MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKL 113 >gi|319738236|emb|CBJ18012.1| ribosomal protein S13 [Ectocarpus siliculosus] Length = 119 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 11/116 (9%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V++L +I+G+G S+++C K + R S++ ++ I Sbjct: 1 MPYIIGTSIPEDKVLVQSLSHIYGLGSSQSKNLCKKAGFGSDSR-----GSDITFLKGKI 55 Query: 61 EQDYQ------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 +++ + DLRR I+RL + YRGLRH++GLPVRGQRTHTNA+ R Sbjct: 56 LENFAEATSLPLGSDLRRFQNNKIRRLCSISTYRGLRHKKGLPVRGQRTHTNAKKR 111 >gi|50305489|ref|XP_452704.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641837|emb|CAH01555.1| KLLA0C11297p [Kluyveromyces lactis] Length = 137 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +GIG K+++ IC+KL P R+HQL E +V+ I + + +EGD R V NI Sbjct: 24 FYGIGLKTAEKICSKLGFYPWMRMHQLTEPQVMAITSEL-ANMTIEGDARAIVKENIALK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y G+RH GLPVRGQRT NA+ ++ K Sbjct: 83 RSIGSYEGMRHALGLPVRGQRTRNNAKVARRLNK 116 >gi|324309721|gb|ADY18502.1| ribosomal protein S13 [Phaeodactylum tricornutum] Length = 116 Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G +P K + +L Y +GIG +S +C KL +V L + + ++ + + Sbjct: 1 MVYLFGSELPDNKSIFFSLRYAYGIGKGNSSSLCKKLGFSKNLKVRNLSKEHINKLIKIM 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 E +V GDL+++ + K L + YRGLR +GLPVRGQRTHTNART +K Sbjct: 61 EVLKIEVAGDLKKSKLLISKTLASIKSYRGLRKNQGLPVRGQRTHTNARTARK 113 >gi|15150734|ref|NP_150400.1| ribosomal protein S13 [Pylaiella littoralis] gi|15147740|emb|CAC50841.1| ribosomal protein S13 [Pylaiella littoralis] Length = 119 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+G+G S +C K + R + S+ + Sbjct: 1 MPYIVGTSIPEDKVLVQSVGHIYGLGLTQSISLCKKAGFGSDSRGRHISFSKGKLLGNLA 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 E + DLRR IKRL L YRG RHR+GLPVRGQRTHTNA+ R F Sbjct: 61 EATPLPLGADLRRFTHDKIKRLCSLSTYRGSRHRKGLPVRGQRTHTNAKKRPPF 114 >gi|224020963|ref|YP_002608196.1| ribosomal protein S13 [Carica papaya] gi|170522375|gb|ACB20485.1| ribosomal protein S13 [Carica papaya] Length = 116 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 69/113 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVANEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+R + + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRTHTNARTCRKL 113 >gi|84508531|ref|YP_448695.1| ribosomal protein S13 [Dictyota dichotoma] gi|45925699|gb|AAS79080.1| ribosomal protein S13 [Dictyota dichotoma] Length = 115 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 21/122 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPE-----------RRVHQLV 49 M+ I G + K V+ +L YI GIG S+ +CNK I + R + L+ Sbjct: 1 MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60 Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 E+ ++ Q++E+ YQ+E I+R + CYRGLRH+RGLPVRGQRTHTNA+ Sbjct: 61 EASSFRLGQSLEK-YQIE---------RIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKR 110 Query: 110 RK 111 R Sbjct: 111 RS 112 >gi|57013930|ref|YP_173403.1| ribosomal protein S13 [Nicotiana tabacum] gi|134063|sp|P05488|RT13_TOBAC RecName: Full=Ribosomal protein S13, mitochondrial gi|13150|emb|CAA27645.1| unnamed protein product [Nicotiana tabacum] Length = 116 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 69/113 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARLVGDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTCRKL 113 >gi|269101038|ref|YP_003289186.1| 30S ribosomal protein S13 [Ectocarpus siliculosus] gi|266631546|emb|CAV31217.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus] gi|270118676|emb|CAT18738.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus] Length = 126 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPER----RVHQLVESEVIQI 56 M R G ++ K++ AL I+GIG +++I K + R L + ++ + Sbjct: 1 MVRFLGRDLANNKKIKYALTAIYGIGLSRAKEILEKAGLENVDKEGVRTKDLSDEDISNL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 R+ +E+DYQ+E DL R +NIKRLM+ G +G RHR GLPVRGQ Sbjct: 61 RKVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQ 105 >gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus carota] Length = 116 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G K+V A ++GIG K + + +L I ++ +L + ++ Q+ Q I Sbjct: 1 MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|32363341|sp|Q8LPW2|RT13_SOYBN RecName: Full=Small ribosomal subunit protein S13, mitochondrial; Flags: Precursor gi|20977547|gb|AAK94674.1| ribosomal protein S13 [Glycine max] Length = 148 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 9 IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 IP KR+V AL +HGIG +Q I +L + + V L + E+ IR+ + + Y + Sbjct: 39 IPDNKRLVYALQNLHGIGRSKAQHIVAELGVE-NKFVKDLSKRELYSIRELLSK-YLIGN 96 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DL++ V ++ RL+ + CYRG+RH LP RGQRTHTNARTR+ Sbjct: 97 DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRR 139 >gi|84394568|ref|ZP_00993272.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01] gi|84374788|gb|EAP91731.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01] Length = 82 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 1/83 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83 + Y VEGDLRR V+MNIKRLMD Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMD 82 >gi|139438875|ref|ZP_01772335.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC 25986] gi|133775586|gb|EBA39406.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC 25986] Length = 59 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/46 (82%), Positives = 41/46 (89%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 VEGDLRR N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK Sbjct: 2 VEGDLRRERNQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 47 >gi|213612393|ref|ZP_03370219.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 51 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 38/43 (88%), Positives = 41/43 (95%) Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 1 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 43 >gi|320592066|gb|EFX04505.1| 40S ribosomal protein s13 [Grosmannia clavigera kw1407] Length = 118 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + IG ++S I K +I P ++ L V + + Sbjct: 1 MVFILGVNFNELKLVKKALESFYAIGPQTSARILAKFSIHPRAKMGTLPPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + VE D RR V NIKRL D+G YRG RH GLPVRGQRT T T +K K Sbjct: 61 S-NMTVENDARRVVQDNIKRLRDMGTYRGKRHAMGLPVRGQRTRTQILTARKLNK 114 >gi|255632414|gb|ACU16557.1| unknown [Glycine max] Length = 148 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 9 IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 IP KR+V AL +HGIG +Q I +L + + V L + E+ IR+ + + Y + Sbjct: 39 IPDNKRLVYALQNLHGIGRSKAQHIVAELGVE-NKFVKDLSKRELHSIRELLSK-YLIGN 96 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 DL++ V ++ RL+ + CYRG+RH LP RGQRTHTNARTR+ Sbjct: 97 DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRR 139 >gi|16215380|emb|CAC80432.1| ribosomal protein S13 [Helianthus annuus] Length = 116 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARSVADEQVRIASTKIDGIGPKKAILVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTSRK 112 >gi|11276604|pir||T48605 ribosomal protein S13-like protein F18O22.110 [imported] - Arabidopsis thaliana gi|7573457|emb|CAB87771.1| ribosomal protein precursor-like [Arabidopsis thaliana] Length = 197 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 17/123 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I L + + + E E+I +R + Sbjct: 61 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQME-NKITKDMAEEELIILRDEVS 119 Query: 62 QDYQVEGDL---------------RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTN 106 + Y +EGDL RR A+ IKRL ++ CYRG+RH +GLP RGQRT N Sbjct: 120 K-YMIEGDLAFVNELLICVVDVVQRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNN 178 Query: 107 ART 109 RT Sbjct: 179 CRT 181 >gi|50291021|ref|XP_447943.1| hypothetical protein [Candida glabrata CBS 138] gi|49527254|emb|CAG60894.1| unnamed protein product [Candida glabrata] Length = 126 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 3/110 (2%) Query: 11 RAKRVVR-ALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 + K V+R AL +G+G +++ +C+KL P R+HQL E +++ I + + +EG Sbjct: 11 KGKEVIRIALASKFYGVGKSTAERLCSKLGFYPWMRMHQLSEPQILNITSELS-NMTIEG 69 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 D R V NI +G Y G+RH GLPVRGQRT NA+T +K + GV Sbjct: 70 DARAIVRENIALKKKIGSYEGMRHALGLPVRGQRTRNNAKTARKINRIGV 119 >gi|317038077|ref|XP_001401569.2| 40S ribosomal protein S13 [Aspergillus niger CBS 513.88] Length = 119 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG +S + + I P +V L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D ++E DLRR NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 61 S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 114 >gi|260945795|ref|XP_002617195.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849049|gb|EEQ38513.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 121 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G+ ++Q IC K+ I P R++QL E +++ I + + D +EG L++ + NI++ Sbjct: 24 IFGVGYTTAQQICAKVGIYPRMRMNQLTEPQIMAINKELS-DLTIEGHLKQRILENIQQK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++G Y G RH GLPVRGQRT NA T K+ + Sbjct: 83 KEIGSYAGNRHAAGLPVRGQRTRNNASTAKRLNR 116 >gi|32363483|sp|P08977|RT13_MAIZE RecName: Full=Ribosomal protein S13, mitochondrial gi|897624|gb|AAA70274.1| S13 homologous protein; putative [Zea mays] gi|102579650|gb|ABF70930.1| ribosomal protein S13 [Zea mays subsp. mays] Length = 129 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++H+L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKG 116 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART RK+ KG Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKQIRKG 117 >gi|24636941|gb|AAN63483.1|AF314105_1 ribosomal protein S13 [Serapias vomeracea] Length = 116 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989797|emb|CAD91291.1| mitochondrial ribosomal protein RPS13 [Neuwiedia veratrifolia] Length = 116 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGHKKAMKVRYRLGISGNIKMNELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|33322096|gb|AAQ06768.1|AF496109_3 30s ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis] Length = 82 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++++IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83 ++ Y+VEGDLRR V+MNIKRL+D Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVD 82 >gi|21450006|ref|NP_659268.1| ribosomal protein S13 [Laminaria digitata] gi|21425331|emb|CAC87964.1| ribosomal protein S13 [Laminaria digitata] Length = 119 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+GIG S+ +C K + R + ++ + Sbjct: 1 MPFIIGTSIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFAKGKNLENLA 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVISTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|86279745|gb|ABC94527.1| 30S ribosomal protein S13 [Cryptomonas tetrapyrenoidosa] Length = 81 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/81 (48%), Positives = 55/81 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SSQ+I K + + R L + ++ IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIGLTYIYGIGLSSSQNILTKAQVNSDIRCKDLTDQDISIIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRL 81 +++YQVEG RR ++NIKRL Sbjct: 61 DKEYQVEGAARRVESLNIKRL 81 >gi|166895633|ref|YP_001661427.1| ribosomal protein S13 [Cycas taitungensis] gi|166706965|dbj|BAF98429.1| ribosomal protein S13 [Cycas taitungensis] Length = 150 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 69/114 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G ++V A I GIG K + + +L I +V++ + ++ QI Q I Sbjct: 1 MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 QD+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +KFG Sbjct: 61 GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRKFG 114 >gi|114151585|ref|YP_740351.1| ribosomal protein S13 [Zea perennis] gi|114151617|ref|YP_740439.1| ribosomal protein S13 [Zea luxurians] gi|114151651|ref|YP_740416.1| ribosomal protein S13 [Zea mays subsp. parviglumis] gi|115278553|ref|YP_762332.1| ribosomal protein S13 [Sorghum bicolor] gi|115278623|ref|YP_762484.1| ribosomal protein S13 [Tripsacum dactyloides] gi|55851987|gb|AAV67796.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116057|gb|ABE98690.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116102|gb|ABE98734.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116150|gb|ABE98781.1| ribosomal protein S13 [Zea mays subsp. mays] gi|102567919|gb|ABF70836.1| ribosomal protein S13 [Zea perennis] gi|102567984|gb|ABF70868.1| ribosomal protein S13 [Zea mays subsp. parviglumis] gi|110287613|gb|ABG65659.1| ribosomal protein S13 [Zea luxurians] gi|114309674|gb|ABI60891.1| ribosomal protein S13 [Sorghum bicolor] gi|114432114|gb|ABI74663.1| ribosomal protein S13 [Tripsacum dactyloides] Length = 116 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++H+L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|126134141|ref|XP_001383595.1| hypothetical protein PICST_57353 [Scheffersomyces stipitis CBS 6054] gi|126095744|gb|ABN65566.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 122 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG+++++ IC K+ I P+ R++QL E +++ + + I D VEG L++ + +I+ Sbjct: 24 IFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEIS-DLLVEGHLKQKINNDIRMK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D+G Y G RH +GLPVRGQ T NA T K K Sbjct: 83 RDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNK 116 >gi|189193877|ref|XP_001933277.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978841|gb|EDU45467.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 125 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + A V R+L GIG SQ I K I P +V L S ++ + + Sbjct: 1 MVFINGFSFTEATLVKRSLESFFGIGPSVSQRIMAKFYIHPWAKVGSLKNSTLLDLSAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK---GG 117 + ++E DLRR V +I+RL D+G YRG RH GLPVRGQ+T T T ++ K GG Sbjct: 61 T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQKTRTQITTARRLNKVERGG 119 Query: 118 VAR 120 R Sbjct: 120 TGR 122 >gi|310792538|gb|EFQ28065.1| 30S ribosomal protein S13 [Glomerella graminicola M1.001] Length = 119 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G +SQ I K +I P +V L V + + Sbjct: 1 MVFILGVNFSEQKLVKKALESFFALGPTASQRILAKYSIHPMAKVGTLAPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + +E D R+ + N+ RL D+G YRG RH GLPVRGQRT T T KK + Sbjct: 61 S-NMTIENDARKVIQQNVMRLKDMGSYRGRRHAMGLPVRGQRTRTQIETAKKLNRA 115 >gi|317146135|ref|XP_003189773.1| 40S ribosomal protein S13 [Aspergillus oryzae RIB40] Length = 137 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P +V +L +V+ I A+ Sbjct: 19 MVFILGVNFPERNLVKKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAAL 78 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR +IKRL + G YRG RH GLPVRGQRT T +T K + Sbjct: 79 S-EMKIENDLRRQYLDDIKRLKETGTYRGRRHALGLPVRGQRTRTQIKTAVKLNR 132 >gi|268053547|ref|YP_003288906.1| ribosomal protein S13 [Saccharina japonica] gi|268053586|ref|YP_003288944.1| ribosomal protein S13 [Saccharina religiosa] gi|268053625|ref|YP_003288982.1| ribosomal protein S13 [Saccharina ochotensis] gi|268053664|ref|YP_003289059.1| ribosomal protein S13 [Saccharina diabolica] gi|268053703|ref|YP_003289110.1| ribosomal protein S13 [Saccharina longipedalis] gi|262318167|dbj|BAI48492.1| ribosomal protein S13 [Saccharina japonica] gi|262318206|dbj|BAI48530.1| ribosomal protein S13 [Saccharina religiosa] gi|262318245|dbj|BAI48568.1| ribosomal protein S13 [Saccharina ochotensis] gi|262318284|dbj|BAI48606.1| ribosomal protein S13 [Saccharina diabolica] gi|262318323|dbj|BAI48644.1| ribosomal protein S13 [Saccharina longipedalis] Length = 119 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R+ Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKRQ 112 >gi|62989713|emb|CAD91249.1| mitochondrial ribosomal protein RPS13 [Aa paleacea] Length = 116 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 2/113 (1%) Query: 1 MARIAGV-NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 M+ I+G ++P +K V A + GIG + + + +L I ++++L +S++ Q+ Q Sbjct: 1 MSYISGARSVPDSK-VRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTQSQIDQMEQM 59 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I QD+ V +L+R +I+R + L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 60 ISQDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|62989725|emb|CAD91255.1| mitochondrial ribosomal protein RPS13 [Caladenia cf. caerulea Chase O-487] Length = 116 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+GV ++V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGVRSVPDEQVRIASTKMDGIGPKKAIQVRDRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGKRADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|302023187|ref|ZP_07248398.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68] Length = 100 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 45 VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 + L + IR+ ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 1 MKDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTK 59 Query: 105 TNARTRK 111 NARTRK Sbjct: 60 NNARTRK 66 >gi|24636937|gb|AAN63481.1|AF314103_1 ribosomal protein S13 [Dactylorhiza romana] Length = 116 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|327195251|ref|YP_004339033.1| ribosomal protein S13 [Coccomyxa sp. C-169] gi|325070747|gb|ADY75475.1| ribosomal protein S13 [Coccomyxa sp. C-169] Length = 134 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 63/112 (56%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I N+ K++ AL I+GIG + S+ IC+ L I +V L S + + Q I Sbjct: 1 MIYILNTNLSDNKKIGNALPKIYGIGNQLSKQICDDLGISSGLKVGDLSPSHIDLLSQTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q Y + +L+ + +RL + YRG+RH +GLP RGQRTH NA+T +K Sbjct: 61 PQTYVIGAELQGETRRSKERLALVSSYRGIRHSQGLPSRGQRTHGNAQTARK 112 >gi|268164091|ref|YP_003288868.1| ribosomal protein S13 [Saccharina coriacea] gi|262318401|dbj|BAI48720.1| ribosomal protein S13 [Saccharina coriacea] Length = 119 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|62989759|emb|CAD91272.1| mitochondrial ribosomal protein RPS13 [Disa tripetaloides] Length = 116 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSSISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|268164052|ref|YP_003288817.1| ribosomal protein S13 [Saccharina angustata] gi|262318362|dbj|BAI48682.1| ribosomal protein S13 [Saccharina angustata] Length = 119 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGRNLENLA 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKRPSL 114 >gi|74325175|ref|YP_316595.1| ribosomal protein S13 [Thalassiosira pseudonana] gi|74100241|gb|AAZ99402.1| ribosomal protein S13 [Thalassiosira pseudonana] Length = 115 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I +P K + +L + GIG S IC +L + ++ +L + I++ ++I Sbjct: 1 MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 E + + +LR++ + +K+L+ + Y+G+R RGLPVRGQRTHTNA+T Sbjct: 61 ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKT 110 >gi|18024674|gb|AAF98448.1| putative mitochondrial 40S ribosomal protein [Aspergillus niger] Length = 148 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 3/115 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P +R +++L GIG +S + + I P +V L +V+ I A+ Sbjct: 1 MVFILGVNFP--ERNLKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D ++E DLRR NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 59 S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 112 >gi|62989831|emb|CAD91308.1| mitochondrial ribosomal protein RPS13 [Habenaria marmorata] Length = 116 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989799|emb|CAD91292.1| mitochondrial ribosomal protein RPS13 [Oncidium orillum] Length = 116 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|212537637|ref|XP_002148974.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224] gi|210068716|gb|EEA22807.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224] Length = 119 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P ++ L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLQTFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + ++E DLRR + +IKRL D G YRG RH GLPVRGQ T + +T K Sbjct: 61 SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115 >gi|62989825|emb|CAD91305.1| mitochondrial ribosomal protein RPS13 [Telipogon pogonostalix] Length = 116 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989769|emb|CAD91277.1| mitochondrial ribosomal protein RPS13 [Eulophia spectabilis] gi|62989791|emb|CAD91288.1| mitochondrial ribosomal protein RPS13 [Mormodes aromatica] Length = 116 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|242808625|ref|XP_002485205.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500] gi|218715830|gb|EED15252.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500] Length = 119 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P ++ L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLETFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + ++E DLRR + +IKRL D G YRG RH GLPVRGQ T + +T K Sbjct: 61 SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115 >gi|62989805|emb|CAD91295.1| mitochondrial ribosomal protein RPS13 [Pachyplectron arifolium] Length = 116 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|57281988|emb|CAD19553.1| ribosomal protein S13 [Campynema lineare] Length = 116 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|254580623|ref|XP_002496297.1| ZYRO0C15158p [Zygosaccharomyces rouxii] gi|238939188|emb|CAR27364.1| ZYRO0C15158p [Zygosaccharomyces rouxii] Length = 121 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +GIG +++ +C+KL P R+HQL ES+++ I + + +EGD R V NI Sbjct: 24 FYGIGEGTAEKVCSKLGFYPWMRMHQLSESQIMNIASEL-SNMTIEGDARAVVKENIALK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y+G+RH LPVRGQ T NA T +K K Sbjct: 83 KRIGSYQGMRHTLNLPVRGQHTRNNANTARKLNK 116 >gi|62989821|emb|CAD91303.1| mitochondrial ribosomal protein RPS13 [Ponthieva racemosa] Length = 116 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|24636925|gb|AAN63475.1|AF314097_1 ribosomal protein S13 [Agapanthus africanus] Length = 116 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I R++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNRKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989781|emb|CAD91283.1| mitochondrial ribosomal protein RPS13 [Lycomormium squalidum] Length = 116 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|296040615|gb|ADG85275.1| ribosomal protein S13 [Silene noctiflora] Length = 116 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL I GIG K + +L + ++ +L + ++ +I + I Sbjct: 1 MPYISGARLVDDKQVKIALTKISGIGRKKGLQLSARLGLSENIKIKELTKYQIDKIEEII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 EQ++ V +L+R+ +I RL+ + CYRG+RH+ GLP+RGQR+HTNART +K Sbjct: 61 EQEHIVHWELKRSERTDIDRLISISCYRGIRHQDGLPLRGQRSHTNARTSRK 112 >gi|50261289|ref|YP_052897.1| ribosomal protein S13 [Saprolegnia ferax] gi|48237602|gb|AAT40651.1| ribosomal protein S13 [Saprolegnia ferax] Length = 117 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 64/105 (60%) Query: 9 IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 I + ++ +L ++GI S+ IC + I P+ +++L ++++ ++ I ++ ++E Sbjct: 9 ISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYINKNIKIEQ 68 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 L++ N L+++ RG+RH GLPVRGQRTHTNA+T KK Sbjct: 69 LLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKL 113 >gi|328860508|gb|EGG09614.1| hypothetical protein MELLADRAFT_31252 [Melampsora larici-populina 98AG31] Length = 122 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 4/116 (3%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + GVN+P K V AL GIG +++ ICN+L P+ V + ++E D Sbjct: 4 VLGVNLPERKLVQFALLQYVGIGHYTAKLICNRLQFHPKLTVDFKLSDPPKPKTLSLEAD 63 Query: 64 ----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E DLRR V NI +G YRG RH G PV GQRTHTNA+T KK + Sbjct: 64 PLQRLIIESDLRREVRANIAHHRAVGSYRGKRHALGFPVNGQRTHTNAKTAKKLNR 119 >gi|15218103|ref|NP_177898.1| 30S ribosomal protein S13, chloroplast, putative [Arabidopsis thaliana] gi|32363391|sp|Q9CA19|RT13_ARATH RecName: Full=Small ribosomal subunit protein S13, mitochondrial; Short=mS13; Flags: Precursor gi|12323293|gb|AAG51625.1|AC012193_7 putative 30S ribosomal protein S13; 38847-37703 [Arabidopsis thaliana] gi|33589778|gb|AAQ22655.1| At1g77750 [Arabidopsis thaliana] gi|332197896|gb|AEE36017.1| small ribosomal subunit protein S13 [Arabidopsis thaliana] Length = 154 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ +P K + L ++GIG + S + L I + L E+I +R+ + Q Sbjct: 33 RVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVGQ 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q +LRR V I+RL+++ CYRG RHR GLP RGQRT TNART+K Sbjct: 92 -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKK 139 >gi|57281962|emb|CAD19540.1| ribosomal protein S13 [Ixiolirion tataricum] Length = 116 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEEVRIASAKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERAHIERFISISRYRGIRHQDGSPLRGQRTHTNARTWRK 112 >gi|11830845|emb|CAA89892.1| ribosomal protein S13 [Magnolia x soulangeana] gi|30141203|emb|CAD30284.1| ribosomal protein S13 [Freesia sp. QC-2002] Length = 116 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G K+V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|255018384|ref|ZP_05290510.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-515] Length = 68 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%) Query: 55 QIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +IR+ +++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 2 KIREILDR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRK 57 >gi|62989739|emb|CAD91262.1| mitochondrial ribosomal protein RPS13 [Cleistes rosea] Length = 116 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 2/113 (1%) Query: 1 MARIAGV-NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 M+ I+G ++P +K V A + GIG K + + ++L I ++++L +S++ ++ Q Sbjct: 1 MSYISGARSVPDSK-VRIASTKMDGIGPKKAIQVRSRLGISGNIKINELTKSQIDKMEQM 59 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I QD+ V + +R +I+RL+ L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 60 ISQDHVVHWEFQRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|84508609|ref|YP_448656.1| ribosomal protein S13 [Desmarestia viridis] gi|45925641|gb|AAS79042.1| ribosomal protein S13 [Desmarestia viridis] Length = 119 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+GIG S+ +C K + R + S+ + Sbjct: 1 MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRG RHR+GLPVRGQRTHTNA+ R Sbjct: 61 EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKR 111 >gi|320582685|gb|EFW96902.1| putative DnaJ-like heat-shock protein [Pichia angusta DL-1] Length = 949 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G K+++ IC K+ + P R+HQL E++V+ + + + D + L + V NIK Sbjct: 854 GVGLKTAEKICAKVGLYPSMRMHQLNETQVMAVTKEL-TDMTIGSRLLQQVRSNIKLKRA 912 Query: 84 LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 G Y+GLRH GLPV GQRT NART ++ K Sbjct: 913 TGSYQGLRHAMGLPVHGQRTKYNARTARRLNK 944 >gi|62989711|emb|CAD91248.1| mitochondrial ribosomal protein RPS13 [Aeranthes moratii] gi|62989717|emb|CAD91251.1| mitochondrial ribosomal protein RPS13 [Arundina graminifolia] gi|62989719|emb|CAD91252.1| mitochondrial ribosomal protein RPS13 [Bletilla striata] gi|62989753|emb|CAD91269.1| mitochondrial ribosomal protein RPS13 [Dendrobium albosanguineum] gi|62989795|emb|CAD91290.1| mitochondrial ribosomal protein RPS13 [Nervilia aragoana] gi|62989807|emb|CAD91296.1| mitochondrial ribosomal protein RPS13 [Palmorchis trilobulata] gi|62989827|emb|CAD91306.1| mitochondrial ribosomal protein RPS13 [Thunia alba] gi|62989833|emb|CAD91309.1| mitochondrial ribosomal protein RPS13 [Phalaenopsis cornu-cervi] Length = 116 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989743|emb|CAD91264.1| mitochondrial ribosomal protein RPS13 [Cryptocentrum peruvianum] gi|62989745|emb|CAD91265.1| mitochondrial ribosomal protein RPS13 [Cymbidium sp. CQ-2003] gi|62989755|emb|CAD91270.1| mitochondrial ribosomal protein RPS13 [Dichaea riopalenquensis] gi|62989779|emb|CAD91282.1| mitochondrial ribosomal protein RPS13 [Lycaste aromatica] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281960|emb|CAD19539.1| ribosomal protein S13 [Rhodohypoxis milloides] gi|62989757|emb|CAD91271.1| mitochondrial ribosomal protein RPS13 [Zygostates grandiflora] gi|62989801|emb|CAD91293.1| mitochondrial ribosomal protein RPS13 [Oncidium splendidum] gi|62989823|emb|CAD91304.1| mitochondrial ribosomal protein RPS13 [Pterostylis nutans] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989723|emb|CAD91254.1| mitochondrial ribosomal protein RPS13 [Bulbophyllum lobbii] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIKVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|33341146|gb|AAQ15134.1|AF355059_1 RPS13 [Asphodelus sp. Quagliariello 16105] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|89280752|ref|YP_514659.1| ribosomal protein S13 [Oryza sativa Indica Group] gi|289065036|ref|YP_003433847.1| ribosomal protein small subunit 13 [Oryza rufipogon] gi|74100119|gb|AAZ99283.1| ribosomal protein S13 [Oryza sativa Indica Group] gi|74100174|gb|AAZ99337.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|74100228|gb|AAZ99390.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|285026118|dbj|BAI67951.1| ribosomal protein small subunit 13 [Oryza rufipogon] gi|285026168|dbj|BAI68000.1| ribosomal protein small subunit 13 [Oryza sativa Indica Group] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 69/113 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKL 113 >gi|76780564|emb|CAD92012.1| mitochondrial ribosomal protein RPS13 [Xeronema callistemon] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGIRGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989783|emb|CAD91284.1| mitochondrial ribosomal protein RPS13 [Megastylis glandulosa] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|156848892|ref|XP_001647327.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM 70294] gi|156118012|gb|EDO19469.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM 70294] Length = 121 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%) Query: 11 RAKRVVR-ALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 + K VVR AL +G+G +++Q IC+KL P R+HQL E +++ I + + +EG Sbjct: 11 KGKEVVRIALASKFYGVGLETAQKICSKLGFYPWMRMHQLTEPQILGITSELS-NMTIEG 69 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + R V NI +G Y+GLRH LPVRGQ T NA T ++ + Sbjct: 70 NARAVVKNNIALKRRIGSYQGLRHAMNLPVRGQNTRNNAHTARRLNR 116 >gi|62989819|emb|CAD91302.1| mitochondrial ribosomal protein RPS13 [Polystachya pubescens] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHIVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|76780566|emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardia rosea] gi|76780568|emb|CAD92014.1| mitochondrial ribosomal protein RPS13 [Uvularia perfoliata] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|33341144|gb|AAQ15133.1|AF355058_1 RPS13 [Asparagus sp. Quagliariello 16104] Length = 116 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLIISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|145932453|ref|YP_001165365.1| ribosomal protein S13 [Phytophthora ramorum] gi|110169651|gb|ABG54116.1| ribosomal protein S13 [Phytophthora ramorum] gi|188038014|gb|ACD46632.1| ribosomal protein S13 [Phytophthora ramorum] Length = 138 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 4/126 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK----FGKG 116 ++ +VE L+++ I L+++ RG+R +GLPVRGQRTHTNA+T KK F K Sbjct: 61 NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQIFIKK 120 Query: 117 GVARKR 122 V+R + Sbjct: 121 RVSRNK 126 >gi|56791629|gb|AAW30352.1| ribosomal protein S13 [Eichhornia crassipes] Length = 110 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 62/95 (65%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A I GIG K + + +L I ++++L + ++ Q+ Q I+QD+ V +L+R + Sbjct: 15 ASTKIDGIGPKKAIQLRYRLGISGNIKINELTKYQIDQMEQMIDQDHFVHWELKRGERAD 74 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 75 IERLISISRYRGIRHQDGSPLRGQRTHTNARTSRK 109 >gi|299830454|ref|YP_003734825.1| ribosomal protein L13 [Pythium ultimum] gi|299830485|ref|YP_003734856.1| ribosomal protein L13 [Pythium ultimum] gi|269810831|gb|ACZ43860.1| ribosomal protein L13 [Pythium ultimum] gi|269810862|gb|ACZ43891.1| ribosomal protein L13 [Pythium ultimum] gi|269812144|gb|ACZ44442.1| ribosomal protein L13 [Pythium ultimum] gi|269812175|gb|ACZ44473.1| ribosomal protein L13 [Pythium ultimum] Length = 137 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 70/121 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINEYQSKKICKNIGINPQITINKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++E L+++ + L+D+ RG+R +GLPVRGQRTHTNA+T KK K V + Sbjct: 61 NKNIKIEQLLKQSKKDRLNELLDIKSNRGIRLSQGLPVRGQRTHTNAKTVKKLKKIFVQK 120 Query: 121 K 121 + Sbjct: 121 Q 121 >gi|62989815|emb|CAD91300.1| mitochondrial ribosomal protein RPS13 [Pleurothallis endotrachys] Length = 116 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ +I Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989817|emb|CAD91301.1| mitochondrial ribosomal protein RPS13 [Podochilus cultratus] Length = 116 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989721|emb|CAD91253.1| mitochondrial ribosomal protein RPS13 [Bracisepalum selebicum] gi|62989735|emb|CAD91260.1| mitochondrial ribosomal protein RPS13 [Chelonistele amplissima] gi|62989751|emb|CAD91268.1| mitochondrial ribosomal protein RPS13 [Geesinkorchis alaticallosa] gi|62989765|emb|CAD91275.1| mitochondrial ribosomal protein RPS13 [Entomophobia kinabaluensis] gi|62989793|emb|CAD91289.1| mitochondrial ribosomal protein RPS13 [Nabaluia angustifolia] Length = 116 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989771|emb|CAD91278.1| mitochondrial ribosomal protein RPS13 [Goodyera pubescens] Length = 116 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|24636958|gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hybrid cultivar] Length = 116 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|30141201|emb|CAD30283.1| ribosomal protein S13 [Hemerocallis littorea] Length = 118 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 74/115 (64%), Gaps = 4/115 (3%) Query: 1 MARIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57 M+ I+G V++P ++ V A + GIG K + + +L I ++++L + ++ Q+ Sbjct: 1 MSYISGARSVSVPDSQ-VRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQME 59 Query: 58 QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q I QD+ V +L+R +I+RL+ + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 60 QMIGQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTCRK 114 >gi|62989773|emb|CAD91279.1| mitochondrial ribosomal protein RPS13 [Huttonaea grandiflora] Length = 116 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|81176511|ref|YP_398395.1| rp13 [Triticum aestivum] gi|134064|sp|P07924|RT13_WHEAT RecName: Full=Ribosomal protein S13, mitochondrial gi|13716|emb|CAA68574.1| unnamed protein product [Triticum aestivum] gi|78675235|dbj|BAE47660.1| rps13 [Triticum aestivum] gi|164422217|gb|ABY55190.1| ribosomal protein S13 [Bambusa oldhamii] gi|169649048|gb|ACA62609.1| rp13 [Triticum aestivum] gi|291498599|gb|ADE08073.1| rps13 [Triticum aestivum] Length = 116 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|259482715|tpe|CBF77457.1| TPA: 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640) [Aspergillus nidulans FGSC A4] Length = 119 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P + V ++L G+G + S I ++ I +V +L +V+ + A+ Sbjct: 1 MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDL-TAV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + ++E DLRR V +IKRL + G YRG RH GLPVRGQRT N + Sbjct: 60 LSEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNK 107 >gi|303314875|ref|XP_003067446.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107114|gb|EER25301.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides posadasii C735 delta SOWgp] Length = 149 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 31 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T +T K Sbjct: 91 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRTQTKTAIKLN 143 >gi|76780560|emb|CAD92010.1| mitochondrial ribosomal protein RPS13 [Polygonatum hookeri] Length = 116 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989763|emb|CAD91274.1| mitochondrial ribosomal protein RPS13 [Earina autumnalis] gi|62989777|emb|CAD91281.1| mitochondrial ribosomal protein RPS13 [Listera smallii] Length = 116 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281968|emb|CAD19543.1| ribosomal protein S13 [Milligania stylosa] gi|57281972|emb|CAD19545.1| ribosomal protein S13 [Doryanthes palmeri] gi|76780557|emb|CAD92008.1| mitochondrial ribosomal protein RPS13 [Isophysis tasmanica] Length = 116 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|30141205|emb|CAD30285.1| ribosomal protein S13 [Lilium speciosum] Length = 116 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V + + GIG K + + +L + + ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +LRR +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHLVHWELRRGSRADIERLISIYPYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|30141207|emb|CAD30286.1| ribosomal protein S13 [Fritillaria persica] Length = 116 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V + + GIG K + + +L + + ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +LRR +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHLVHWELRRGSRADIERLIYISPYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|33341158|gb|AAQ15140.1|AF355065_1 RPS13 [Colchicum persicum] Length = 116 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++ ++V A I GIG K + + +L I ++ +L +S++ + Q I Sbjct: 1 MSYISGASLVPDEQVRIASTKIPGIGPKKAIQVRYRLGISGNIKMKELTKSQIDLLEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 CQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|57281984|emb|CAD19551.1| ribosomal protein S13 [Drymophila sp. Chase 194] Length = 116 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989715|emb|CAD91250.1| mitochondrial ribosomal protein RPS13 [Arpophyllum giganteum] gi|62989731|emb|CAD91258.1| mitochondrial ribosomal protein RPS13 [Cattleya aurantiaca] gi|62989741|emb|CAD91263.1| mitochondrial ribosomal protein RPS13 [Coelia triptera] gi|62989785|emb|CAD91285.1| mitochondrial ribosomal protein RPS13 [Meiracyllium trinasutum] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281992|emb|CAD19555.1| ribosomal protein S13 [Philesia magellanica] gi|57281994|emb|CAD19556.1| ribosomal protein S13 [Lapageria rosea] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQGGSPLRGQRTHTNARTFRK 112 >gi|57281980|emb|CAD19549.1| ribosomal protein S13 [Tecophilaea violiflora] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYILGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989727|emb|CAD91256.1| mitochondrial ribosomal protein RPS13 [Caleana major] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTQMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989809|emb|CAD91297.1| mitochondrial ribosomal protein RPS13 [Panisea tricallosa] gi|62989811|emb|CAD91298.1| mitochondrial ribosomal protein RPS13 [Pholidota carnea] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989729|emb|CAD91257.1| mitochondrial ribosomal protein RPS13 [Calypso bulbosa] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIEKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989829|emb|CAD91307.1| mitochondrial ribosomal protein RPS13 [Wullschlaegelia calcarata] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/109 (39%), Positives = 67/109 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASKKMDGIGPKKAIQVRYRLGIRGNIKMNELTKPQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 QD+ V +L+R +IKRL+ L YRG+RH+ G P+RGQRTHTNART Sbjct: 61 SQDHFVHWELKRGERADIKRLISLSRYRGIRHQDGSPLRGQRTHTNART 109 >gi|298253054|ref|ZP_06976846.1| ribosomal protein S13 [Gardnerella vaginalis 5-1] gi|297532449|gb|EFH71335.1| ribosomal protein S13 [Gardnerella vaginalis 5-1] Length = 70 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/56 (58%), Positives = 45/56 (80%) Query: 56 IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +R +E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK Sbjct: 1 MRDYLEANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 56 >gi|24636931|gb|AAN63478.1|AF314100_1 ribosomal protein S13 [Triteleia laxa] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNSKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQ+THTNART +K Sbjct: 61 SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQQTHTNARTFRK 112 >gi|322706012|gb|EFY97594.1| 30S ribosomal protein S13 [Metarhizium anisopliae ARSEF 23] Length = 119 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G +S I K +I +V L V + + Sbjct: 1 MVFILGVNFNDGKLVKKALESFYALGSTTSSRIMAKYSIHKLAKVGSLSPRTVTSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 Q +E D RR V NI+RL D+G YRG RH GLPVRGQRT T T K + Sbjct: 61 SQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMGLPVRGQRTRTQTATANKLNR 114 >gi|57281974|emb|CAD19546.1| ribosomal protein S13 [Aphyllanthes monspeliensis] Length = 116 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V + + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRISSTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHKDGSPLRGQRTHTNARTFRK 112 >gi|302755154|ref|XP_002961001.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii] gi|302767174|ref|XP_002967007.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii] gi|300164998|gb|EFJ31606.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii] gi|300171940|gb|EFJ38540.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii] Length = 113 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72 K V AL I+G+G + + +IC I + +++ + + ++ I +++ VE +L Sbjct: 3 KAVKFALPRIYGVGRRKAAEICAVFGIGDDVKMNSVPDELFNRMMNYIHENHLVEKELAL 62 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +V M+IKRL+ +G YRG RH GLP+RGQRTHTNA + Sbjct: 63 SVQMDIKRLISIGSYRGYRHTVGLPLRGQRTHTNAMS 99 >gi|134062|sp|P15758|RT13_OENBE RecName: Full=Ribosomal protein S13, mitochondrial gi|70973|pir||R3OB3M ribosomal protein S13 - evening primrose mitochondrion Length = 114 Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + ++L +R+ +L + ++ QI Q Sbjct: 1 MSYISGARLVADEQVRIASTKMDGIGPKKAIQVRSRLGGNIKRK--ELTKYQIDQIEQMR 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQR+HTNART +K Sbjct: 59 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRK 110 >gi|6324248|ref|NP_014318.1| Sws2p [Saccharomyces cerevisiae S288c] gi|1730748|sp|P53937|SWS2_YEAST RecName: Full=37S ribosomal protein SWS2, mitochondrial; AltName: Full=Sick without securin protein 2 gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae] gi|1301975|emb|CAA95955.1| unnamed protein product [Saccharomyces cerevisiae] gi|71064119|gb|AAZ22527.1| Sws2p [Saccharomyces cerevisiae] gi|151944453|gb|EDN62731.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190409070|gb|EDV12335.1| hypothetical protein SCRG_03217 [Saccharomyces cerevisiae RM11-1a] gi|256270278|gb|EEU05496.1| Sws2p [Saccharomyces cerevisiae JAY291] gi|259149280|emb|CAY82522.1| Sws2p [Saccharomyces cerevisiae EC1118] gi|285814570|tpg|DAA10464.1| TPA: Sws2p [Saccharomyces cerevisiae S288c] gi|323335810|gb|EGA77089.1| Sws2p [Saccharomyces cerevisiae Vin13] Length = 143 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +GIG +++ IC+KL P R+HQL E +++ I + +EGD R V NI Sbjct: 24 FYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASELS-TMTIEGDARAIVKDNIALK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y G+RH LPVRGQ T NA+T +K K Sbjct: 83 RKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNK 116 >gi|57281990|emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 68/109 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIAQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHT+ART Sbjct: 61 GQDHVVHWELKRGERAHIERLISISRYRGIRHQEGSPLRGQRTHTSART 109 >gi|57281982|emb|CAD19550.1| ribosomal protein S13 [Luzuriaga radicans] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG + + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|324575274|gb|ADY49937.1| 30S ribosomal protein S13 [Ascaris suum] Length = 62 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 34/47 (72%), Positives = 40/47 (85%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +VEGDLRR V +NIKRLM++ YRG+RHRRGLPVRGQ T N+RTRK Sbjct: 5 KVEGDLRREVQLNIKRLMEIASYRGIRHRRGLPVRGQHTKNNSRTRK 51 >gi|24636929|gb|AAN63477.1|AF314099_1 ribosomal protein S13 [Ipheion uniflorum] gi|33341148|gb|AAQ15135.1|AF355060_1 RPS13 [Nothoscordum inodorum] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVNWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|24636962|gb|AAN63494.1|AF315230_1 ribosomal protein S13 [Tulipa sp. CQ-2001] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281958|emb|CAD19538.1| rps13 [Xanthorrhoea resinosa] Length = 116 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|255718259|ref|XP_002555410.1| KLTH0G08646p [Lachancea thermotolerans] gi|238936794|emb|CAR24973.1| KLTH0G08646p [Lachancea thermotolerans] Length = 149 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 +GIG K+S+ +C KL P R+HQL E +++ I + +EG+ R V NI Sbjct: 24 FYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL-STMTIEGNARAVVKENIALK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y+G+RH LPVRGQ T NA+T ++ + Sbjct: 83 RRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNR 116 >gi|57281996|emb|CAD19557.1| ribosomal protein S13 [Rhipogonum elseyanum] Length = 116 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 67/109 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNART 109 >gi|30141211|emb|CAD30288.1| ribosomal protein S13 [Posidonia oceanica] Length = 116 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLIYISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|4467407|emb|CAA69616.2| ribosomal protein S13 [Elymus sibiricus] Length = 116 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MXYIXGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISXNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|24636927|gb|AAN63476.1|AF314098_1 ribosomal protein S13 [Muscari botryoides] gi|24636933|gb|AAN63479.1|AF314101_1 ribosomal protein S13 [Agave americana] gi|24636935|gb|AAN63480.1|AF314102_1 ribosomal protein S13 [Polianthes tuberosa] gi|24636939|gb|AAN63482.1|AF314104_1 ribosomal protein S13 [Serapias lingua] gi|33341150|gb|AAQ15136.1|AF355061_1 RPS13 [Tulbaghia alliacea] gi|33341154|gb|AAQ15138.1|AF355063_1 RPS13 [Yucca sp. Quagliariello 16107] gi|57281970|emb|CAD19544.1| ribosomal protein S13 [Herreria salsaparilha] gi|76780555|emb|CAD92007.1| mitochondrial ribosomal protein RPS13 [Johnsonia pubescens] gi|76780562|emb|CAD92011.1| mitochondrial ribosomal protein RPS13 [Eriospermum flagelliforme] Length = 116 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989813|emb|CAD91299.1| mitochondrial ribosomal protein RPS13 [Phreatia tahitensis] Length = 116 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|84508569|ref|YP_448617.1| ribosomal protein S13 [Fucus vesiculosus] gi|39653292|gb|AAR29311.1| ribosomal protein S13 [Fucus vesiculosus] Length = 119 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ I+GIG S+ +C K + R + S+ + Sbjct: 1 MPFIIGTPIPEDKILVQSVSQIYGIGLSQSKILCRKAGFGQDCRGKNVSFSQGKILGNLA 60 Query: 61 EQDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 E G DLRR I+RL + YRGLRH++GLP RGQRTHTNA+ R +F Sbjct: 61 ENTSLFLGSDLRRFHNDKIRRLCLMSSYRGLRHKKGLPARGQRTHTNAKKRLQF 114 >gi|57281966|emb|CAD19542.1| ribosomal protein S13 [Convallaria keiskei] Length = 116 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|24636960|gb|AAN63493.1|AF315229_1 ribosomal protein S13 [Iris sp. CQ-2001] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPHEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ + +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVLHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|57281964|emb|CAD19541.1| ribosomal protein S13 [Aspidistra elatior] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989803|emb|CAD91294.1| mitochondrial ribosomal protein RPS13 [Orchis italica] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 61/95 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A + GIG K + + ++L I ++++L +S++ Q+ Q I QD+ V +L+R + Sbjct: 18 ASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMISQDHVVHWELKRGERAD 77 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+R + L YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 78 IERFISLSRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|62989775|emb|CAD91280.1| mitochondrial ribosomal protein RPS13 [Liparis liliifolia] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281998|emb|CAD19558.1| ribosomal protein S13 [Smilax glauca] gi|76780553|emb|CAD92006.1| mitochondrial ribosomal protein RPS13 [Borya septentrionalis] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG + + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|33341156|gb|AAQ15139.1|AF355064_1 RPS13 [Danae racemosa] gi|57282000|emb|CAD19559.1| ribosomal protein S13 [Ruscus aculeatus] Length = 116 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|56791633|gb|AAW30354.1| ribosomal protein S13 [Liriodendron tulipifera] Length = 109 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 64/100 (64%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72 K+V A + GIG K + + +L I ++++L + ++ QI Q I QD+ V +L+R Sbjct: 9 KQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKR 68 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 69 GERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108 >gi|297842551|ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp. lyrata] gi|297334998|gb|EFH65416.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ +P + L ++GIG + S + L I + L E+I +R+ + Q Sbjct: 33 RVGNAEVPNNMPLKTGLQAVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVGQ 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +Q +LRR V I+RL+++ CYRG RHR G+P RGQRT TNART+K Sbjct: 92 -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKK 139 >gi|45191023|ref|NP_985277.1| AER422Cp [Ashbya gossypii ATCC 10895] gi|44984091|gb|AAS53101.1| AER422Cp [Ashbya gossypii ATCC 10895] Length = 144 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 3/107 (2%) Query: 11 RAKRVVR--ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 + K VVR +GIG K+S+ +C KL + P R+ L E +++ + + + +E Sbjct: 11 KGKEVVRIGLASKFYGIGLKTSERLCAKLGLYPWMRMQSLTEPQIMAMSTELSK-MTIED 69 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D R V NI +G Y GLRH GLPV GQRT TNA+T +K + Sbjct: 70 DARAIVKENIALKRRIGSYAGLRHAMGLPVNGQRTRTNAKTARKLNR 116 >gi|62989767|emb|CAD91276.1| mitochondrial ribosomal protein RPS13 [Epipactis helleborine] Length = 116 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|57281956|emb|CAD19537.1| ribosomal protein S13 [Anthericum liliago] Length = 116 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVTIASIKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G PVRGQRTHTNA T +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPVRGQRTHTNAGTFRK 112 >gi|56791627|gb|AAW30351.1| ribosomal protein S13 [Calycanthus floridus] Length = 109 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 61/95 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A + GIG K + + +L I ++++L + ++ QI Q I QD+ V +L+R + Sbjct: 14 ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERAD 73 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 74 IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108 >gi|62989787|emb|CAD91286.1| mitochondrial ribosomal protein RPS13 [Microtis parviflora] Length = 116 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|24636954|gb|AAN63490.1|AF315226_1 ribosomal protein S13 [Hyacinthus sp. CQ-2001] Length = 116 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L + ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGLSGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|24636956|gb|AAN63491.1|AF315227_1 ribosomal protein S13 [Sansevieria trifasciata] Length = 116 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 61/95 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A I GIG K + + +L I ++++L + ++ QI Q + QD+ V +L+R + Sbjct: 18 ASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQILGQDHVVHWELKRGERAD 77 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 78 IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|57281986|emb|CAD19552.1| ribosomal protein S13 [Eustrephus latifolius] Length = 116 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q + Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|308153493|sp|P82163|RR13_SPIOL RecName: Full=30S ribosomal protein S13, chloroplastic; Flags: Precursor gi|188036214|pdb|3BBN|M Chain M, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome Length = 145 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 12/109 (11%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKE--- 103 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K Sbjct: 104 --------KRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 144 >gi|302416813|ref|XP_003006238.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum VaMs.102] gi|261355654|gb|EEY18082.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum VaMs.102] Length = 119 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G SQ I K +I P +V L + + + Sbjct: 1 MVFILGVNFSEQKLVKKALESFYALGPSVSQRILAKYSIHPWAKVGSLAPKTITSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +E D ++ + NI+RL D+G YRG RH LP RGQRT T T KK + V R Sbjct: 61 SV-MTIENDAKKVLRENIQRLKDMGSYRGRRHAMNLPARGQRTRTQIETAKKLNR--VDR 117 Query: 121 KR 122 KR Sbjct: 118 KR 119 >gi|57281976|emb|CAD19547.1| ribosomal protein S13 [Behnia reticulata] gi|57281978|emb|CAD19548.1| ribosomal protein S13 [Blandfordia punicea] Length = 116 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTFRK 112 >gi|62989733|emb|CAD91259.1| mitochondrial ribosomal protein RPS13 [Cephalanthera rubra] Length = 116 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|145932363|ref|YP_001165412.1| ribosomal protein S13 [Phytophthora sojae] gi|110169606|gb|ABG54072.1| ribosomal protein S13 [Phytophthora sojae] Length = 137 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 64/109 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSKKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ +VE L+++ + L+++ RG+R +GLPVRGQRTHTNA+T Sbjct: 61 NKNLKVEQFLKKSKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNAKT 109 >gi|62989737|emb|CAD91261.1| mitochondrial ribosomal protein RPS13 [Chysis bractescens] Length = 116 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|320037802|gb|EFW19739.1| 40S ribosomal protein S13 [Coccidioides posadasii str. Silveira] Length = 156 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 31 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T Sbjct: 91 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 134 >gi|289615638|emb|CBI57559.1| unnamed protein product [Sordaria macrospora] Length = 119 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G+G ++S I K +I P ++ L +++ A Sbjct: 1 MVFILGVNFNEQKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTL-PPKIVTALTAE 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR V NIKRL D+G YRG RH GLPVRGQ+T +K K Sbjct: 60 LSTMTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114 >gi|85091144|ref|XP_958758.1| hypothetical protein NCU09539 [Neurospora crassa OR74A] gi|28920142|gb|EAA29522.1| hypothetical protein NCU09539 [Neurospora crassa OR74A] gi|38566865|emb|CAE76171.1| probable ribosomal protein S13 [Neurospora crassa] Length = 119 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G+G ++S I K +I P ++ L +++ A Sbjct: 1 MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTL-PPKIVTALTAE 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR V NIKRL D+G YRG RH GLPVRGQ+T +K K Sbjct: 60 LSTMTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114 >gi|56791637|gb|AAW30356.1| ribosomal protein S13 [Platanus occidentalis] Length = 108 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 60/95 (63%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A + GIG K + + +L I ++ +L + ++ QI Q I QD+ V +L+R + Sbjct: 14 ASTKMDGIGPKKAIQVRYQLGISGNIKIRELTKYQIDQIEQMIGQDHVVHWELKRGERAD 73 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 74 IERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 108 >gi|67528950|ref|XP_662072.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4] gi|40741043|gb|EAA60233.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4] Length = 130 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 3/108 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P + +++L G+G + S I ++ I +V +L +V+ + A+ Sbjct: 1 MVFILGVNFPEGQ--LKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDL-TAV 57 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + ++E DLRR V +IKRL + G YRG RH GLPVRGQRT N + Sbjct: 58 LSEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNK 105 >gi|56791631|gb|AAW30353.1| ribosomal protein S13 [Laurus nobilis] Length = 115 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 61/95 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A + GIG K + + +L I ++++L + ++ Q+ Q I QD+ V +L+R + Sbjct: 18 ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMIGQDHVVHWELKRGERAD 77 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 78 IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|56791625|gb|AAW30350.1| ribosomal protein S13 [Amborella trichopoda] Length = 102 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 59/92 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A I GIG K + + ++L I ++++L + ++ ++ Q I QD+ V + +R + Sbjct: 11 ASTKIDGIGPKKAIQVRSRLGISGNIKMNELTKYQIDKMEQMIGQDHVVHWEFKRGERAD 70 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 I+RL+ + YRG+RH+ G P+RGQRTHTNART Sbjct: 71 IERLISISRYRGIRHKDGSPLRGQRTHTNART 102 >gi|119175400|ref|XP_001239936.1| hypothetical protein CIMG_09557 [Coccidioides immitis RS] Length = 125 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 1 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T Sbjct: 61 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 104 >gi|213647332|ref|ZP_03377385.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 44 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/36 (94%), Positives = 35/36 (97%) Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 1 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 36 >gi|49147226|ref|YP_025819.1| ribosomal protein S13 [Pseudendoclonium akinetum] gi|33439241|gb|AAQ18778.1| ribosomal protein S13 [Pseudendoclonium akinetum] Length = 119 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + G N+ K AL I+G+G KS+ +CN + I P+ R+ +L +++ + ++ + Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRR- 61 Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + +R IK L+ + CYRG RH LP RGQRT TNA T K Sbjct: 62 -LIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNL 110 >gi|46126121|ref|XP_387614.1| hypothetical protein FG07438.1 [Gibberella zeae PH-1] Length = 119 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN K V +AL + +G +S I K +I +V L V I + Sbjct: 1 MVFLLGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSITAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 Q +E D RR V NI+RL D+G YRG RH GLPVRGQRT T Sbjct: 61 SQ-MTIETDARRLVQENIRRLKDMGSYRGRRHAMGLPVRGQRTRT 104 >gi|224365646|ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera] gi|209954170|emb|CAQ77617.1| ribosomal protein S13 [Vitis vinifera] gi|239764761|gb|ACS15230.1| ribosomal protein S13 [Vitis vinifera] Length = 116 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+ H+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGICHQDGSPLRGQRTHTNARTCRK 112 >gi|56791635|gb|AAW30355.1| ribosomal protein S13 [Piper betle] Length = 109 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 61/95 (64%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A + GIG K + + +L I ++++L + ++ ++ Q I QD+ V +L++ + Sbjct: 14 ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHVVHWELKKGERAD 73 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G PVRGQRTHTNART +K Sbjct: 74 IERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108 >gi|62989789|emb|CAD91287.1| mitochondrial ribosomal protein RPS13 [Monophyllorchis sp. Cassio C282] Length = 116 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/112 (37%), Positives = 66/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GI K + + +L I ++ +L +S++ QI Q I Sbjct: 1 MSYISGARSFPDEQVRIASTKMDGIAHKKAMKVRYRLGISGNIKMTELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHT ART +K Sbjct: 61 SQDHVVHWELKRGERADIERSISLSRYRGIRHQDGSPLRGQRTHTIARTCRK 112 >gi|171693473|ref|XP_001911661.1| hypothetical protein [Podospora anserina S mat+] gi|170946685|emb|CAP73488.1| unnamed protein product [Podospora anserina S mat+] Length = 119 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN AK V +AL + + +G +++ I K +I P ++ L V + + Sbjct: 1 MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D R+ + NIKRL D+G YRG RH LPVRGQRT +T K + Sbjct: 61 S-TMVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNR 114 >gi|226348810|gb|ACO50714.1| ribosomal protein S13 [Micromonas pusilla CCMP1545] Length = 118 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 11 RAKRVVR-ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 +A R +R AL ++G+G ++Q +C++L P+ L Q+ + + + + Sbjct: 10 KADRPIRLALTQVYGLGPSTAQQLCDQLGFHPKMTTGSLKAGHWDQLARIVSAYHITGAE 69 Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 L+R A +I+R + + Y+G R +GLP+RGQRTHTNART +K Sbjct: 70 LKRVQAEDIQRTVRMSSYKGFRFTQGLPLRGQRTHTNARTARK 112 >gi|50409133|ref|XP_456841.1| DEHA2A11704p [Debaryomyces hansenii CBS767] gi|49652505|emb|CAG84816.1| DEHA2A11704p [Debaryomyces hansenii] Length = 121 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G+ +++ IC K+ I P+ R++QL E +++ I + + D +EG L++ + +IK Sbjct: 24 IFGVGYNTAERICAKVGIYPKMRMNQLTEPQIMAINKELS-DLTIEGHLKQKILDDIKLK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G G RH GLPVRGQRT N++T + + Sbjct: 83 RSIGSIAGSRHAAGLPVRGQRTRNNSQTANRLNR 116 >gi|62989747|emb|CAD91266.1| mitochondrial ribosomal protein RPS13 [Cypripedium adamianum] gi|62989749|emb|CAD91267.1| mitochondrial ribosomal protein RPS13 [Paphiopedilum insigne] Length = 117 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR-GLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGGSPLRGQRTHTNARTCRK 113 >gi|13187|emb|CAA38280.1| ribosomal protein S13 [Oenothera berteroana] Length = 114 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + ++L +R+ +L + ++ QI Q Sbjct: 1 MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRSRLGGNIKRK--ELTKYQIDQIEQMR 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ G P+RGQR+HTNART +K Sbjct: 59 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRSHTNARTSRK 110 >gi|33341152|gb|AAQ15137.1|AF355062_1 RPS13 [Dracaena sp. Quagliariello 16106] Length = 116 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 60/95 (63%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 A I GIG K + + +L I ++++L + ++ + Q I QD+ V +L+R + Sbjct: 18 ASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDLLEQMIGQDHVVHWELKRGERAD 77 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 78 IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|110812358|gb|ABG91714.1| ribosomal protein S13 [Shewanella putrefaciens 200] Length = 44 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/36 (91%), Positives = 34/36 (94%) Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK Sbjct: 1 MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 36 >gi|56791639|gb|AAW30357.1| ribosomal protein S13 [Eschscholzia californica] Length = 116 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 66/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G ++V A I GIG + + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYIQGXRSVPDEQVRIASTKIDGIGPQKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKREERAXIERLISIYRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|255727707|ref|XP_002548779.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404] gi|240133095|gb|EER32651.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404] Length = 122 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG+++++ + K+ I P R++QL E +++ + + I Q VEG L++ + +IK Sbjct: 24 IFGIGYQTAEKLMAKVGIYPNCRMNQLSEPQIMDLNKEISQ-LLVEGHLKQKINNDIKLK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 G Y G RH G PV GQRT TNA T +K K Sbjct: 83 RTTGSYAGSRHALGFPVHGQRTRTNASTARKLNK 116 >gi|229315919|ref|YP_002860145.1| ribosomal protein S13 [Micromonas sp. RCC299] gi|226431204|gb|ACO55609.1| ribosomal protein S13 [Micromonas sp. RCC299] Length = 120 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73 +V AL I+GIG ++ +C++L + V L +++ Q+ + I + + +L R Sbjct: 14 KVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVINRFHVTGQELERV 73 Query: 74 VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR-TRKK 112 + +I R + + Y+G R +GLPVRGQRTHTNAR TRKK Sbjct: 74 IQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKK 113 >gi|134058479|emb|CAL00688.1| unnamed protein product [Aspergillus niger] Length = 104 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 +++L GIG +S + + I P +V L +V+ I A+ D ++E DLRR Sbjct: 1 MKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAALS-DMKIENDLRRQYL 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 60 DNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 99 >gi|283795035|ref|YP_003359452.1| ribosomal protein S13 [Synedra acus] gi|261279691|gb|ACX61999.1| ribosomal protein S13 [Synedra acus] Length = 117 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ--VEGDLRRTVAM 76 L I+GIG K S IC KL + Q+ ++ + + + ++Y+ V +L++ + Sbjct: 18 LTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNKEYKLKVSNELKKIESF 77 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +++L+ + RGLR +GLPVRGQRTHTNA+T KK Sbjct: 78 RLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKK 113 >gi|71005516|ref|XP_757424.1| hypothetical protein UM01277.1 [Ustilago maydis 521] gi|46096907|gb|EAK82140.1| hypothetical protein UM01277.1 [Ustilago maydis 521] Length = 361 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 47/164 (28%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------- 55 + GV++ K V AL +GI + ++ +C +L++ V L ES++ Q Sbjct: 171 LLGVHLADHKLVRIALTNFYGISYATANRLCARLSLHDRATVSSLTESQITQLSAYLSSP 230 Query: 56 -------------------------IRQAIEQD--------YQVEGDLRRTVAMNIKRLM 82 +R ++EQ+ ++E DL+R + NI Sbjct: 231 GSIPARKASPTLLPSSSAVCSSQDVVRPSMEQNAANDALRQIKIEADLKRVLHANINHHR 290 Query: 83 DLGCYRGLRHRRGLPVRGQRTHTNARTRKKF------GKGGVAR 120 D+G YRG RH LPVRGQRT TNART KK G G VAR Sbjct: 291 DVGSYRGRRHAAHLPVRGQRTSTNARTAKKLNRLERRGFGTVAR 334 >gi|325092307|gb|EGC45617.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H88] Length = 125 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G+N P + V +AL GIG + + + + ++ L +V+ + A+ Sbjct: 1 MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR + +I+RL D G RG RH GLPVRGQ T + +T K K Sbjct: 61 SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNTRSQIKTAIKLNK 114 >gi|9695400|ref|NP_037622.1| ribosomal protein S13 [Phytophthora infestans] gi|6692652|gb|AAF24795.1|U17009_28 ribosomal protein S13 [Phytophthora infestans] gi|58012158|gb|AAW62566.1| ribosomal protein S13 [Phytophthora infestans] Length = 137 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINEFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 ++ +VE L++ + L+++ RG+R +GLPVRGQRTHTNA Sbjct: 61 NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107 >gi|62989761|emb|CAD91273.1| mitochondrial ribosomal protein RPS13 [Diuris sulphurea] Length = 116 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/112 (35%), Positives = 65/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GI K + + +L I ++ +L + ++ Q+ Q I Sbjct: 1 MSYISGARSFPDSQVRIASTKMEGIAPKKAIQVRYRLGIRGNIKMTELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|58201997|gb|AAW67052.1| ribosomal protein S13 [Phytophthora infestans] gi|58202044|gb|AAW67098.1| ribosomal protein S13 [Phytophthora infestans] Length = 137 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINGFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 ++ +VE L++ + L+++ RG+R +GLPVRGQRTHTNA Sbjct: 61 NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107 >gi|289808335|ref|ZP_06538964.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 42 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/34 (97%), Positives = 33/34 (97%) Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 1 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 34 >gi|113170478|ref|YP_717269.1| Rps13 [Ostreococcus tauri] gi|112806885|emb|CAL36391.1| unnamed protein product [Ostreococcus tauri] Length = 116 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 54/91 (59%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I+GI + IC++L + V L + ++ + ++ Y E DL++ V N +R Sbjct: 22 IYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRILQYYYLTEHDLKKQVQGNFQRF 81 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + +GCYRG R + LP+RGQRTHTNA+T K+ Sbjct: 82 IQIGCYRGFRVTQRLPLRGQRTHTNAKTAKR 112 >gi|238880236|gb|EEQ43874.1| conserved hypothetical protein [Candida albicans WO-1] Length = 122 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG+++++ + K+ I P R++QL E +++ + + I Q VEG L+ + +IK Sbjct: 24 IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKIINDIKMK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y G RH G PVRGQRT TN T ++ + Sbjct: 83 RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116 >gi|68479427|ref|XP_716245.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|68479596|ref|XP_716162.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|46437820|gb|EAK97160.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|46437908|gb|EAK97247.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] Length = 122 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG+++++ + K+ I P R++QL E +++ + + I Q VEG L+ + +IK Sbjct: 24 IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKINNDIKMK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y G RH G PVRGQRT TN T ++ + Sbjct: 83 RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116 >gi|110816065|ref|YP_684397.1| ribosomal protein S13 [Oltmannsiellopsis viridis] gi|86450276|gb|ABC96355.1| ribosomal protein S13 [Oltmannsiellopsis viridis] Length = 117 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 GIG K + +IC+KL + + L + I + I Y + +RR NI+RL+ Sbjct: 24 GIGPKKAIEICDKLGVASSMNLSSL-NAYQIHVLTGILNSYDIRHSVRRKKRENIQRLVR 82 Query: 84 LGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + YRG RH GLP RGQRT TNA T +KF Sbjct: 83 ISSYRGFRHTAGLPCRGQRTKTNANTARKF 112 >gi|30141209|emb|CAD30287.1| ribosomal protein S13 [Veratrum latifolium] Length = 114 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 2/112 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG + + +L I ++++L + ++ ++ + I Sbjct: 1 MSYISGARLVPDEQVRIASTKIDGIG--PTIQVRYRLGISGNIKINELTKYQIDKMEEII 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 59 GQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTFRK 110 >gi|241959230|ref|XP_002422334.1| mitochondrial ribosomal protein of the small ribosomal subunit, putative [Candida dubliniensis CD36] gi|223645679|emb|CAX40340.1| mitochondrial ribosomal protein of the small ribosomal subunit, putative [Candida dubliniensis CD36] Length = 122 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG+++++ + K+ I P R++QL E +++ + + I Q VEG L+ + +IK Sbjct: 24 IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKINNDIKLK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y G RH G PVRGQRT TN T ++ + Sbjct: 83 RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116 >gi|70994567|ref|XP_752061.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293] gi|66849695|gb|EAL90023.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293] gi|159125025|gb|EDP50142.1| 40S ribosomal protein S13 [Aspergillus fumigatus A1163] Length = 169 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%) Query: 17 RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76 ++L G+G + S + + I P +V +L +V+ + A+ D ++E DLRR + Sbjct: 53 KSLETFFGVGPQVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIENDLRRQILD 111 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +IKRL + G YRG RH GLPVRGQRT T A K Sbjct: 112 DIKRLKESGSYRGRRHALGLPVRGQRTRTQAENAK 146 >gi|255950082|ref|XP_002565808.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592825|emb|CAP99193.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255] Length = 114 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 GIG SS + ++ I P RV +L +V+ + A+ + ++E DLRR V +IKR+ Sbjct: 12 FFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDL-TAVLSEMKIENDLRREVLNDIKRM 70 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHT 105 + G YRG RH GLPVRGQRT T Sbjct: 71 KETGTYRGRRHALGLPVRGQRTRT 94 >gi|186920119|ref|YP_001874773.1| ribosomal protein S13 [Hemiselmis andersenii] gi|186461065|gb|ACC78227.1| ribosomal protein S13 [Hemiselmis andersenii] Length = 113 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I VN+ KRV + ++GIG + CN+L I + V L ++ + + + I Sbjct: 1 MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 E Q+ V+ L+ I L+D+ YRG+RH LPVRGQRT TNAR+RK+ Sbjct: 61 EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRKR 113 >gi|119501002|ref|XP_001267258.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181] gi|119415423|gb|EAW25361.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181] Length = 118 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 1/106 (0%) Query: 10 PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 P+ + ++L G+G S + + I P +V +L +V+ + A+ D ++E D Sbjct: 9 PQLCMLTKSLETFFGVGPLVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIEND 67 Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 LRR + +IKRL + G YRG RH GLPVRGQRT T T K + Sbjct: 68 LRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 113 >gi|326482074|gb|EGE06084.1| 40S ribosomal protein S13 [Trichophyton equinum CBS 127.97] Length = 200 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + P + V +AL GIG + + I P V +L +V+ + A+ Sbjct: 82 MVFILGTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 141 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 142 -SNMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 195 >gi|327304315|ref|XP_003236849.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892] gi|326459847|gb|EGD85300.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892] Length = 147 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + P + V +AL GIG + + I P V +L +V+ + A+ Sbjct: 29 MVFILGTSFPERQLVRKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 88 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 89 S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 142 >gi|289065187|ref|YP_003434239.1| ribosomal protein S13 [Chattonella marina] gi|288871899|dbj|BAI70586.1| ribosomal protein S13 [Chattonella marina] Length = 138 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV-IQIRQAIEQ 62 + NIP ++ L I+G +C ++ + P L +S++ + ++ E Sbjct: 3 LLKTNIPLTNKLRTGLKKIYGFNDFFIYKMCKEIGLNPSLSFKNLKKSQIGLLLKWVNEN 62 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + +L++ N RL+ + YRGLRH+ GLP RGQRTHTN +T+++ Sbjct: 63 NLLINDELKKNQLDNKNRLITIKSYRGLRHKNGLPTRGQRTHTNRKTQRRL 113 >gi|238491704|ref|XP_002377089.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357] gi|220697502|gb|EED53843.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357] Length = 107 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 +++L GIG S + + I P +V +L +V+ I A+ + ++E DLRR Sbjct: 1 MKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAALSE-MKIENDLRRQYL 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 +IKRL + G YRG RH GLPVRGQRT T Sbjct: 60 DDIKRLKETGTYRGRRHALGLPVRGQRTRT 89 >gi|292559459|ref|YP_003540827.1| ribosomal protein S13 [Hartmannella vermiformis] gi|290775712|gb|ADD62211.1| ribosomal protein S13 [Hartmannella vermiformis] Length = 120 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 49/88 (55%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I+G+G+ S + KL + L + +++ Y E L+R+V +NI++ Sbjct: 22 IYGLGYSKSFHLLEKLGFSRLAWMQSLNLYRFNSLIFFLKKFYMTENILKRSVYLNIQKK 81 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++L Y G RH LP+RGQRTHTNA+T Sbjct: 82 INLNNYAGFRHISNLPIRGQRTHTNAKT 109 >gi|118431572|ref|NP_148134.2| 30S ribosomal protein S13P [Aeropyrum pernix K1] gi|32363509|sp|Q9YB60|RS13_AERPE RecName: Full=30S ribosomal protein S13P gi|116062897|dbj|BAA80738.2| 30S ribosomal protein S13P [Aeropyrum pernix K1] Length = 150 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAGV+I ++ L I GIG+ ++ + L + PE++V L E E+ ++ + + Sbjct: 10 IVRIAGVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVL 69 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 +DY+ DL + +I+R M +G +RG+RH+ GL V Sbjct: 70 RDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYGLKV 129 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 130 RGQRTRTTGR 139 >gi|326472680|gb|EGD96689.1| 40S ribosomal protein S13 [Trichophyton tonsurans CBS 112818] Length = 124 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G + P + V +AL GIG + + I P V +L +V+ + A+ + + Sbjct: 11 GTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGALS-NMK 69 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 70 IENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 119 >gi|300521596|gb|ADK26009.1| r-protein S13p [Candidatus Nitrososphaera gargensis] Length = 215 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 RIAG +I +K+V+ A+ I GIG+ +Q + L I P++RV L +SE+ ++ QAI Sbjct: 13 RIAGKDIEGSKKVIVAVSEIKGIGYNFAQVLTQTLNINPDKRVGFLTDSELGELEQAIAH 72 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + DL + +I+R + +RG RH GL VRG Sbjct: 73 PDKAGVPAWYLNRRKNMDTGSNHHMITSDLDFASSNDIEREKMVMSWRGYRHMFGLRVRG 132 Query: 101 QRTHTNAR 108 QRT T R Sbjct: 133 QRTRTTGR 140 >gi|289597069|ref|YP_003483765.1| ribosomal protein S13P [Aciduliprofundum boonei T469] gi|289534856|gb|ADD09203.1| ribosomal protein S13P [Aciduliprofundum boonei T469] Length = 148 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 29/146 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V+ A+ I GIG++ ++ I L + P++++ +L + ++ +IR I Sbjct: 7 IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 66 Query: 61 EQ---------------DY---------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96 E+ DY E DL++ +N RL + CYRG+RH +GL Sbjct: 67 EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDIN--RLKRIKCYRGVRHEKGL 124 Query: 97 PVRGQRTHTNARTRKKFGKGGVARKR 122 VRGQRT +N R+ GV+RK+ Sbjct: 125 RVRGQRTRSNGRSGLTV---GVSRKK 147 >gi|254167094|ref|ZP_04873947.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|254167757|ref|ZP_04874607.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|197623285|gb|EDY35850.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|197623950|gb|EDY36512.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] Length = 150 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 29/146 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V+ A+ I GIG++ ++ I L + P++++ +L + ++ +IR I Sbjct: 9 IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 68 Query: 61 EQ---------------DY---------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96 E+ DY E DL++ +N RL + CYRG+RH +GL Sbjct: 69 EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDIN--RLKRIKCYRGVRHEKGL 126 Query: 97 PVRGQRTHTNARTRKKFGKGGVARKR 122 VRGQRT +N R+ GV+RK+ Sbjct: 127 RVRGQRTRSNGRSGLTV---GVSRKK 149 >gi|288871945|dbj|BAI70631.1| ribosomal protein S13 [Heterosigma akashiwo] Length = 126 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQ 65 NI + + L ++G+ +C +L + + + +S++ I + + E++ Sbjct: 6 TNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDEKNVL 65 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++ DL++ V N K+L+ + YRG RH+ GLP RGQRTHTNART++K Sbjct: 66 IKDDLQKFVLDNKKQLIGIKTYRGSRHKEGLPTRGQRTHTNARTQRKL 113 >gi|239811649|gb|ACS27136.1| ribosomal protein S13 [Heterosigma akashiwo] gi|239811689|gb|ACS27175.1| ribosomal protein S13 [Heterosigma akashiwo] Length = 126 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQ 65 NI + + L ++G+ +C +L + + + +S++ I + + E++ Sbjct: 6 TNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDEKNVL 65 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++ DL++ V N K+L+ + YRG RH+ GLP RGQRTHTNART++K Sbjct: 66 IKDDLQKFVLDNKKQLIAIKTYRGSRHKEGLPTRGQRTHTNARTQRKL 113 >gi|302908932|ref|XP_003049961.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730898|gb|EEU44248.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 119 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G +S I K +I +V L V + + Sbjct: 1 MVFILGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q +E D RR V NI+RL D+G YRG RH GLPVRG Sbjct: 61 SQ-MTIETDARRQVQENIRRLKDMGSYRGRRHAMGLPVRG 99 >gi|20094907|ref|NP_614754.1| 30S ribosomal protein S13P [Methanopyrus kandleri AV19] gi|32363353|sp|Q8TVC1|RS13_METKA RecName: Full=30S ribosomal protein S13P gi|19888143|gb|AAM02684.1| Ribosomal protein S13 [Methanopyrus kandleri AV19] Length = 151 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 24/132 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV----------- 49 + RIA V++ K+V AL I GIG + + IC +L + E+++ +L Sbjct: 9 IVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEI 68 Query: 50 ------ESEVIQIRQAIEQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96 ES + ++DY+ V +L TV +I RL + YRG+RH GL Sbjct: 69 KKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGL 128 Query: 97 PVRGQRTHTNAR 108 PVRGQRT ++ R Sbjct: 129 PVRGQRTKSSFR 140 >gi|116206296|ref|XP_001228957.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51] gi|88183038|gb|EAQ90506.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51] Length = 115 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 5/115 (4%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN +++V++ + +G +++ I K +I P ++ L + + + Sbjct: 1 MVFIFGVNF-NEQKLVKSF---YALGPQTADRILAKYSIYPGAKMGTLPPKTLTALTAEL 56 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR + NIKRL D+G YRG RH GLPVRGQRT T +K K Sbjct: 57 ST-MNIESDARRVLQDNIKRLRDMGTYRGRRHAMGLPVRGQRTRNQIETARKLNK 110 >gi|50546092|ref|XP_500573.1| YALI0B06578p [Yarrowia lipolytica] gi|49646439|emb|CAG82804.1| YALI0B06578p [Yarrowia lipolytica] Length = 156 Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 54/92 (58%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 + G+G ++ +C K+ + P R+ +L + +++ I + + + +E DL + + +I+R Sbjct: 24 VFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKELSTNVTIESDLAKKINADIERK 83 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 G Y G RH G+PV+GQ+T TN + ++F Sbjct: 84 RKTGSYVGRRHVMGMPVKGQKTRTNGKNARRF 115 >gi|296805123|ref|XP_002843386.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480] gi|238844688|gb|EEQ34350.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480] Length = 118 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + +AL GIG + + I P V +L +V+ + A+ + ++E DL+R + Sbjct: 14 IQKALRSFFGIGELRCNQLMARFHIHPTATVGELATRQVLDLTGALS-NMKIENDLKREI 72 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIKRL D G YRG RH LPVRGQ T + ++ KF + Sbjct: 73 LDNIKRLKDTGTYRGRRHALNLPVRGQNTRSQIKSAIKFNR 113 >gi|240281197|gb|EER44700.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H143] Length = 101 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G+N P + V +AL GIG + + + + ++ L +V+ + A+ Sbjct: 1 MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + ++E DLRR + +I+RL D G RG RH GLPVRGQ Sbjct: 61 SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQ 100 >gi|148643485|ref|YP_001273998.1| 30S ribosomal protein S13P [Methanobrevibacter smithii ATCC 35061] gi|222445016|ref|ZP_03607531.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii DSM 2375] gi|261350414|ref|ZP_05975831.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374] gi|158706442|sp|A5UN52|RS13_METS3 RecName: Full=30S ribosomal protein S13P gi|148552502|gb|ABQ87630.1| ribosomal protein S13p [Methanobrevibacter smithii ATCC 35061] gi|222434581|gb|EEE41746.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii DSM 2375] gi|288861197|gb|EFC93495.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374] Length = 147 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI+ ++ K + +AL I G+G S +C L + E ++ + + +V++I + + Sbjct: 8 LVRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEIL 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ +E DL T+ ++ R+ Y+G RH GLPV Sbjct: 68 ENPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPV 127 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R G Sbjct: 128 RGQRTKSTFRNSSSVG 143 >gi|91228970|ref|ZP_01262865.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01] gi|91187490|gb|EAS73827.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01] Length = 71 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRR 72 + Y VEGDLRR Sbjct: 61 AK-YTVEGDLRR 71 >gi|302348809|ref|YP_003816447.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15] gi|302329221|gb|ADL19416.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15] Length = 173 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA +IP V+ L I GIG+ ++ I KL I P R+ L + ++ A+ Sbjct: 12 VVRIANTDIPGEDTVIYGLSRIKGIGYATALAIARKLGIDPTARIGYLQPDVIKRLEDAV 71 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V +L +I R + +G +RG+RH+ G V Sbjct: 72 NDLTRLSLPSWLYNRRKDYESGQDKHLVGAELIFVARRDIDREIKIGSWRGVRHKLGYKV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ+THT RT G Sbjct: 132 RGQKTHTTGRTGMTVG 147 >gi|213612286|ref|ZP_03370112.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 79 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKR 80 + + VEGDLRR ++M+IKR Sbjct: 61 AK-FVVEGDLRREISMSIKR 79 >gi|330929276|ref|XP_003302579.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1] gi|311321985|gb|EFQ89344.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1] Length = 92 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%) Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 K I P +V L S ++ + + + ++E DLRR V +I+RL D+G YRG RH G Sbjct: 3 KFYIHPWAKVGSLKNSTLLDLTAELA-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMG 61 Query: 96 LPVRGQRTHTNARTRKKFGK---GGVAR 120 LPVRGQ+T T T ++ K GG R Sbjct: 62 LPVRGQKTRTQITTARRLNKVERGGTGR 89 >gi|48478291|ref|YP_023997.1| 30S ribosomal protein S13P [Picrophilus torridus DSM 9790] gi|74567419|sp|Q6KZP8|RS13_PICTO RecName: Full=30S ribosomal protein S13P gi|48430939|gb|AAT43804.1| small subunit ribosomal protein S13P [Picrophilus torridus DSM 9790] Length = 158 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + S+ I KL + P++R+ +L E ++ ++R+ I Sbjct: 14 IVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYI 73 Query: 61 E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +D+ V DL + +I + + Y+G+RH RGL V Sbjct: 74 EGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKV 133 Query: 99 RGQRTHTNAR 108 RGQR +N R Sbjct: 134 RGQRMRSNGR 143 >gi|149235401|ref|XP_001523579.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|149248956|ref|XP_001528820.1| hypothetical protein LELG_05785 [Lodderomyces elongisporus NRRL YB-4239] gi|146452988|gb|EDK47244.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146453348|gb|EDK47604.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 122 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG K + + ++ I P +V+QL E +++++ + I Q VEG L++ + +I+ Sbjct: 24 IFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNKEISQ-LTVEGHLKQKINSDIQMK 82 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + G+RH +G PVRGQ+T TN T ++ K Sbjct: 83 RAINSRAGIRHAQGFPVRGQKTKTNGATARRLNK 116 >gi|124027412|ref|YP_001012732.1| 30S ribosomal protein S13P [Hyperthermus butylicus DSM 5456] gi|158706239|sp|A2BK76|RS13_HYPBU RecName: Full=30S ribosomal protein S13P gi|123978106|gb|ABM80387.1| 30S ribosomal protein S13p [Hyperthermus butylicus DSM 5456] Length = 151 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP +V L + GIG + +C L I P +R+ L ++E+ +I +A+ Sbjct: 10 IVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAM 69 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R + +RG+RH GL V Sbjct: 70 ANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKV 129 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT T R G Sbjct: 130 RGQRTATTGRIGMTIG 145 >gi|327400269|ref|YP_004341108.1| 30S ribosomal protein S13P [Archaeoglobus veneficus SNP6] gi|327315777|gb|AEA46393.1| ribosomal protein S13P [Archaeoglobus veneficus SNP6] Length = 147 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K V+ AL I GIG + ++ I + L I +++ ++ + + ++R+ + Sbjct: 7 IVRIADTDLDGSKSVMFALTGIKGIGLRMAKSIVSALGIDGRQKLGEMDDETIEKLRKFV 66 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E+D + + D+ ++I+ ++ + CYRG+RH RG VR Sbjct: 67 EEDIESLPSWLLNRRKDPHTGKDLHLLSKDVDFAKMVDIETMIRMKCYRGIRHARGKKVR 126 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R+ + G Sbjct: 127 GQRTRSTGRSGRTVG 141 >gi|331250171|ref|XP_003337697.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316687|gb|EFP93278.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 203 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 62/156 (39%), Gaps = 44/156 (28%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI-----------------------P 40 I GVN+P K V L GIG ++ IC +L I P Sbjct: 3 ILGVNLPEHKLVRIGLTRFVGIGHYTANLICARLQIHKALTVGELSEHQIGRLSALLSSP 62 Query: 41 PERRV--HQLVESEVIQIRQAIEQD-------------------YQVEGDLRRTVAMNIK 79 P H++ E + I ++ D +E DLRR V NI Sbjct: 63 PTTPPTNHKVAELDGIPAPSTLDFDSGPSPQPKLLSLADDPLQRLLIESDLRREVRANIA 122 Query: 80 RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y+G RH G PV GQRTHTNA+T +K K Sbjct: 123 HHRAIGSYKGKRHALGFPVNGQRTHTNAKTARKLNK 158 >gi|297527615|ref|YP_003669639.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710] gi|297256531|gb|ADI32740.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710] Length = 157 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG +I + + V L I G+G + IC +L I PE R+ L + E+ +I + Sbjct: 16 IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 75 Query: 61 E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY D+ V +I+R + +RG+RH GL V Sbjct: 76 SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 135 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 136 RGQRTRTTGR 145 >gi|126465712|ref|YP_001040821.1| 30S ribosomal protein S13P [Staphylothermus marinus F1] gi|158706279|sp|A3DMQ3|RS13_STAMF RecName: Full=30S ribosomal protein S13P gi|126014535|gb|ABN69913.1| SSU ribosomal protein S13P [Staphylothermus marinus F1] Length = 151 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG +I + + V L I G+G + IC +L I PE R+ L + E+ +I + Sbjct: 10 IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 69 Query: 61 E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY D+ V +I+R + +RG+RH GL V Sbjct: 70 SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 129 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 130 RGQRTRTTGR 139 >gi|39961431|ref|XP_364684.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15] gi|145011032|gb|EDJ95688.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15] Length = 119 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G + S I K I P ++ L + + + Sbjct: 1 MVLILGVNFHEQKLVRKALESFWNLGPQKSARILAKYCIHPMAKLGTLPPKTITALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E + ++ V NI+RL D+G YRG RH LPVRGQ+T T +K + Sbjct: 61 S-TMNIENEAKKVVLDNIRRLRDMGTYRGRRHAMHLPVRGQQTKNQTETARKLNQ 114 >gi|296109383|ref|YP_003616332.1| ribosomal protein S13P [Methanocaldococcus infernus ME] gi|295434197|gb|ADG13368.1| ribosomal protein S13P [Methanocaldococcus infernus ME] Length = 153 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI+ +I K+V+ AL I+GIG ++ I I P + L + EV +I + + Sbjct: 12 LIRISRTDIDGNKKVIMALQDIYGIGEAMARAIVRVTNIDPNKLAGYLTDEEVKKIEEVL 71 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + +EGDL +I RL + CYRG+RH GLP Sbjct: 72 QDPAKFGIPSWMFNRRKDYVTGEDKHVIEGDLIVVKQEDINRLKRIKCYRGIRHELGLPC 131 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 132 RGQRTKSTFR 141 >gi|169837741|ref|ZP_02870929.1| 30S ribosomal protein S13 [candidate division TM7 single-cell isolate TM7a] Length = 53 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/35 (80%), Positives = 30/35 (85%) Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 NIKRL D+ YRGLRH+ GLPVRGQRT TNARTRK Sbjct: 2 NIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRK 36 >gi|315045402|ref|XP_003172076.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893] gi|311342462|gb|EFR01665.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893] Length = 118 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 17 RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76 +AL GIG + + I P V +L +V+ + A+ + ++E DL+R + Sbjct: 16 KALRSFFGIGELRCSQLMARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILD 74 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 75 NIKRLKSTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 113 >gi|288931231|ref|YP_003435291.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642] gi|288893479|gb|ADC65016.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642] Length = 147 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K +V AL I GIG + ++ I N L + ++ L + E+ ++++ + Sbjct: 7 IVRIADTDLDGNKPLVHALTGIKGIGLRMARAITNHLGLNAREKLGNLSDEEIEKLKKFV 66 Query: 61 EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E+ D + G D+ ++I+RL+ + YRG+RH +G VR Sbjct: 67 EENIEELPSWMLNRRKDLYTGKDLHLLGKDVDLAKKLDIERLIKIRAYRGIRHAKGYKVR 126 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT + G Sbjct: 127 GQRTRSTGRTGQTVG 141 >gi|76780570|emb|CAD92015.1| mitochondrial ribosomal protein RPS13 [Paris quadrifolia] Length = 116 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 61/112 (54%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG + + +L + ++++L + + Q+ Q I Sbjct: 1 MLYISGARSVPDEQVRIASTNIDGIGPTKAILVRYRLGVSGNIKMNELTKYHIDQLEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ +L+R ++ RL+ + YRG+ H+ G P+RG RTHTNA T +K Sbjct: 61 GQDHVGHWELKRGERADLDRLISISRYRGIHHQDGSPLRGHRTHTNAGTFRK 112 >gi|14591411|ref|NP_143491.1| 30S ribosomal protein S13P [Pyrococcus horikoshii OT3] gi|6226061|sp|O74021|RS13_PYRHO RecName: Full=30S ribosomal protein S13P gi|3258070|dbj|BAA30753.1| 148aa long hypothetical 30S ribosomal protein S13 [Pyrococcus horikoshii OT3] Length = 148 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL A +I RL + YRG+RH GLPV Sbjct: 67 QDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 127 RGQRTRSNFR 136 >gi|213402553|ref|XP_002172049.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces japonicus yFS275] gi|212000096|gb|EEB05756.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces japonicus yFS275] Length = 142 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GV++P K V AL +GIG +++ IC +L+ ++ L E+++ ++ Q I Sbjct: 1 MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQ-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 +E DL+R V NI R + + Y+GLRH G Sbjct: 60 LNGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94 >gi|14520743|ref|NP_126218.1| 30S ribosomal protein S13P [Pyrococcus abyssi GE5] gi|32363436|sp|Q9V1A0|RS13_PYRAB RecName: Full=30S ribosomal protein S13P gi|5457959|emb|CAB49449.1| rps13P SSU ribosomal protein S13P/S18E [Pyrococcus abyssi GE5] Length = 148 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL A +I RL + YRG+RH GLPV Sbjct: 67 QDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147 >gi|226292588|gb|EEH48008.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb18] Length = 157 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 ++AL GIG + + + + ++ L +++ + A+ + ++E DLRR + Sbjct: 48 MKALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQIL 106 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +I+RL D+G RG RH GLPVRGQRT + +T K + Sbjct: 107 DDIQRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNR 146 >gi|332157867|ref|YP_004423146.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2] gi|331033330|gb|AEC51142.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2] Length = 148 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + ++ +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEIL 66 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL A +I RL + YRG+RH GLPV Sbjct: 67 QDPVAHGIPRWAVNRPKDYETGKDLHLITAKLEMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 127 RGQRTRSNFR 136 >gi|18978022|ref|NP_579379.1| 30S ribosomal protein S13P [Pyrococcus furiosus DSM 3638] gi|32363354|sp|Q8U0E2|RS13_PYRFU RecName: Full=30S ribosomal protein S13P gi|18893805|gb|AAL81774.1| SSU ribosomal protein S13P [Pyrococcus furiosus DSM 3638] Length = 148 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 +DY+ DL A +I RL + YRG+RH GLPV Sbjct: 67 ADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147 >gi|167044121|gb|ABZ08804.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote HF4000_APKG5C13] Length = 208 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP ++++ L I G+G+ + I N L I P +R+ L +V I I Sbjct: 8 LVRIVGNDIPGERKMIVGLTQIRGVGYMFANTILNLLKINPNQRIGYLSLEQVKSIESII 67 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + + D+ TV +I+R G +RG+RH GL V Sbjct: 68 KNPSASNFPSWFLNRRKDVETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKV 127 Query: 99 RGQRTHTNAR 108 RGQRT R Sbjct: 128 RGQRTRCTGR 137 >gi|288560162|ref|YP_003423648.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1] gi|288542872|gb|ADC46756.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1] Length = 149 Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI+ ++ K + +AL I G+G S+ IC L + ++ + E +V +I + Sbjct: 8 LVRISRKDVDGNKTIEQALTQIKGVGLSLSRSICLTLGLNTTDKIGYISEDDVTKIEDLL 67 Query: 61 E--QDYQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E Q+Y + E DL T+ ++ R+ Y+G RH GLPV Sbjct: 68 ENPQNYSIPDWMLNRRKDYATGDDLHLIESDLDMTLRDDLNRMKKTRSYKGRRHEVGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + R GV+R R Sbjct: 128 RGQRTKSTFRHSSTV---GVSRSR 148 >gi|41615251|ref|NP_963749.1| 30S ribosomal protein S13P [Nanoarchaeum equitans Kin4-M] gi|74579692|sp|Q74M95|RS13_NANEQ RecName: Full=30S ribosomal protein S13P gi|40068975|gb|AAR39310.1| NEQ467 [Nanoarchaeum equitans Kin4-M] Length = 153 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + IA V++ K + L + G+ + + +C L I R++ L + E+ ++ A+ Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++ V D + T+ +IKR M + +RG RHR GLPV Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT ++ R + G Sbjct: 133 RGQRTRSHHRKGRTVG 148 >gi|284162135|ref|YP_003400758.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631] gi|284012132|gb|ADB58085.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631] Length = 146 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K V+ AL I GIG + ++ I + L + P ++ +L + + ++R+ + Sbjct: 5 IVRIADTDLDGNKPVMIALTGIKGIGLRMAKAITSALGLNPRAKLGELDDETIERLRKLV 64 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E++ + + D+ ++I++++ + CYRG+RH +G V Sbjct: 65 EEELEQHIPSWMFNRRKDPYSGKDLHLLSKDVDFAKMLDIEKMIKIKCYRGVRHAKGYKV 124 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 125 RGQRTRSTGR 134 >gi|146420609|ref|XP_001486259.1| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC 6260] Length = 77 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 R++QL E +++ I + + D VEG L++ + +IK +G Y GLRH GLPVRGQRT Sbjct: 2 RMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGLRHASGLPVRGQRT 60 Query: 104 HTNARTRKKFGK 115 N+ T ++ + Sbjct: 61 RNNSSTARRLNR 72 >gi|170088480|ref|XP_001875463.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650663|gb|EDR14904.1| predicted protein [Laccaria bicolor S238N-H82] Length = 112 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN+P AL +GIG K++ +C +L + + +V L +V + + Sbjct: 1 MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 R + NI +G Y G RH LPVRGQ T +NA+T KK + Sbjct: 61 SAP-------AREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQ 108 >gi|297601533|ref|NP_001051020.2| Os03g0704000 [Oryza sativa Japonica Group] gi|255674816|dbj|BAF12934.2| Os03g0704000 [Oryza sativa Japonica Group] Length = 203 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKVTKDLSEEEVITLRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRG 89 Y +EGDL+R + I+RL ++ CYR Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRA 132 >gi|212223248|ref|YP_002306484.1| 30S ribosomal protein S13P [Thermococcus onnurineus NA1] gi|212008205|gb|ACJ15587.1| SSU ribosomal protein S13P [Thermococcus onnurineus NA1] Length = 149 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + I P + L + +V +I + + Sbjct: 8 IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEEIL 67 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ A +I RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPTWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 128 RGQRTRSNFR 137 >gi|1071882|dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] Length = 90 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 52/90 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V A I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90 QD+ V +L+R +I+RL+ + CYRG+ Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGI 90 >gi|301500973|ref|YP_003795438.1| ribosomal protein S13 [Alveolata sp. CCMP3155] gi|300069519|gb|ADJ66626.1| ribosomal protein S13 [Chromerida sp. RM11] Length = 127 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ GV +P ++ + AL + GI + + + + P+RRV L +V Q+R + Sbjct: 16 RLEGVLLPSSQHIKHALTNLKGIQHGRASILLLRARLNPKRRVGLLTNEQVKQLRTSFSN 75 Query: 63 -DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + E L R+ ++ +RL + RG+R RR L RGQRT N +T K+F Sbjct: 76 ASFSTENVLMRSFFLSKQRLYEARLIRGVRLRRRLTNRGQRTKNNNKTIKRF 127 >gi|315229892|ref|YP_004070328.1| 30S ribosomal protein S18e (S13p) [Thermococcus barophilus MP] gi|315182920|gb|ADT83105.1| SSU ribosomal protein S18e (S13p) [Thermococcus barophilus MP] Length = 148 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + +C + P ++ L + +V I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVCRVAGLDPFQKAGYLTDEQVKLIEEIL 66 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ A +I RL + YRG+RH GLP+ Sbjct: 67 EDPVKHGIPPWAVNRPKDYETGRDMHLIGAKLVMAWREDINRLRRIRAYRGIRHELGLPL 126 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 127 RGQRTRSNFR 136 >gi|57641441|ref|YP_183919.1| 30S ribosomal protein S13P [Thermococcus kodakarensis KOD1] gi|73917914|sp|Q5JJF1|RS13_PYRKO RecName: Full=30S ribosomal protein S13P gi|57159765|dbj|BAD85695.1| SSU ribosomal protein S13P [Thermococcus kodakarensis KOD1] Length = 149 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV+I K+V AL I GIG + + I P + L + +V +I + + Sbjct: 8 IVRVAGVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEIL 67 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 +DY+ D+ A ++ RL + YRG+RH GLPV Sbjct: 68 ADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPV 127 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 128 RGQRTRSNFR 137 >gi|238601365|ref|XP_002395391.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553] gi|215466046|gb|EEB96321.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553] Length = 162 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 33/50 (66%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E +LRR + NI R +G Y GLRH GLPVRGQ T TNA+T KK + Sbjct: 109 IETELRRQIRENIHRQRSIGSYVGLRHAMGLPVRGQNTQTNAKTAKKLNR 158 >gi|11499866|ref|NP_071110.1| 30S ribosomal protein S13P [Archaeoglobus fulgidus DSM 4304] gi|6226060|sp|O27999|RS13_ARCFU RecName: Full=30S ribosomal protein S13P gi|2648238|gb|AAB88972.1| SSU ribosomal protein S13P (rps13P) [Archaeoglobus fulgidus DSM 4304] Length = 146 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K ++ AL I GIG ++++ I N+L + ++ +L + + ++++ + Sbjct: 6 IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E++ + + D+ ++I+RL+ + YRG+RH RG VR Sbjct: 66 EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R + G Sbjct: 126 GQRTRSTGRKGRTVG 140 >gi|110225694|ref|YP_665699.1| ribosomal protein S13 [Mesostigma viride] gi|17222565|gb|AAL36738.1|AF353999_18 ribosomal protein S13 [Mesostigma viride] Length = 116 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 7/96 (7%) Query: 22 IHGIGFKSSQDICNKLAI----PPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 + G+G K+S IC + + P+ +++S +Q R + L + +N Sbjct: 22 VFGLGKKNSIQICRSMGLHERMSPKMSSKFILDS--LQERLETSLGNSLGAPLINRIHLN 79 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKK 112 +RL+ + YRG RH RGLP RGQRT TNART RKK Sbjct: 80 KERLIKISSYRGFRHHRGLPARGQRTRTNARTCRKK 115 >gi|257076680|ref|ZP_05571041.1| 30S ribosomal protein S13P [Ferroplasma acidarmanus fer1] Length = 159 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA +I +R+ L I+G+G + + + KL + R++ L E EV++IR+ + Sbjct: 14 IVRIANKDIRGERRMDLGLADINGVGERLANILIKKLNLDRNRQIGDLSEDEVLEIRKYV 73 Query: 61 E-QDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E ++Y+ + DL + +I + + YRGLRH +G V Sbjct: 74 ESKEYEGMPVWLLNHRKDVATGKNFNLLSNDLILKINDDINLMKKMRSYRGLRHEQGHKV 133 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 134 RGQRTRSNGR 143 >gi|190345872|gb|EDK37832.2| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC 6260] Length = 77 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 R++QL E +++ I + + D VEG L++ + +IK +G Y G RH GLPVRGQRT Sbjct: 2 RMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGSRHASGLPVRGQRT 60 Query: 104 HTNARTRKKFGK 115 N+ T ++ + Sbjct: 61 RNNSSTARRLNR 72 >gi|242398330|ref|YP_002993754.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739] gi|242264723|gb|ACS89405.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739] Length = 156 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A V+I K++ AL I GIG + IC + P+ + L E +V I + Sbjct: 15 IVRVANVDIDGHKQLRLALTGIRGIGVNFATVICRIAGLDPKMKAGYLTEEQVKAIEAVL 74 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ A ++ RL + YRG+RH GLP+ Sbjct: 75 EDPAKHGLPSWILNRPKDYEQGRDMHLIGAKLVMAWREDVNRLRKIRAYRGIRHELGLPL 134 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 135 RGQRTRSNFR 144 >gi|11466590|ref|NP_066480.1| ribosomal protein S13 [Rhodomonas salina] gi|10444177|gb|AAG17751.1|AF288090_27 ribosomal protein S13 [Rhodomonas salina] Length = 102 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI + R K V AL I G+G + +CNK I +V L + +VI I + I Sbjct: 1 MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 +Q+ VE L+ V +IKRL+ + C+RG H++ Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK 95 >gi|297790005|ref|XP_002862918.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp. lyrata] gi|297308691|gb|EFH39177.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp. lyrata] Length = 60 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/40 (62%), Positives = 31/40 (77%) Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 R V I+RL+++ CYRG RHR G+P RGQRT TNART+K Sbjct: 6 RRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKK 45 >gi|254172984|ref|ZP_04879658.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4] gi|214033140|gb|EEB73968.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4] Length = 149 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + I P + L + +V I + + Sbjct: 8 IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKLIEKIL 67 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ A ++ RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 128 RGQRTRSNFR 137 >gi|303389678|ref|XP_003073071.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC 50506] gi|303302215|gb|ADM11711.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC 50506] Length = 153 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI KR+ AL I G+G + S IC +L I +RR ++ E E+ +I AI Sbjct: 13 IVRIHNTNIDGTKRIAFALTKIRGVGIRISTAICKRLGIDLKRRAGEMSEEEMKRISDAI 72 Query: 61 --------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR--------GLPV 98 Q V+G + + + + RG +++R GL V Sbjct: 73 LDPASLGIPESYLNHQKDPVDGTTSHLIGTKLDADLRMMIERGKKNKRIRACRLDVGLKV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R K GV+RK+ Sbjct: 133 RGQRTKSNGRRGKSM---GVSRKK 153 >gi|327311848|ref|YP_004338745.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20] gi|326948327|gb|AEA13433.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20] Length = 156 Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 26/144 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ AK V AL I GIG S+ IC +L + P + L E ++ ++ A+ Sbjct: 7 IVRVGDTDLEGAKAVAFALARIKGIGISSAFAICRRLGVDPYAPLGSLSEEQISKLDWAV 66 Query: 61 EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +++ +L +I + L ++G+RH GL VR Sbjct: 67 RNLHEIAPAWFLNRRRDPVSGRDVHLIGSELILAAKSDIDLMKKLRSWKGMRHAAGLKVR 126 Query: 100 GQRTHTNARTRKKFG-KGGVARKR 122 GQRT T R FG GVA+K+ Sbjct: 127 GQRTVTTGR----FGPTAGVAKKK 146 >gi|240104026|ref|YP_002960335.1| 30S ribosomal protein S13P [Thermococcus gammatolerans EJ3] gi|239911580|gb|ACS34471.1| SSU ribosomal protein S13P (rps13P) [Thermococcus gammatolerans EJ3] Length = 149 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + + P + L + +V I + + Sbjct: 8 IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGLDPYMKAGYLTDEQVKLIEKIL 67 Query: 61 E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ A +I RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNAR 108 RGQRT +N R Sbjct: 128 RGQRTRSNFR 137 >gi|256810446|ref|YP_003127815.1| ribosomal protein S13P [Methanocaldococcus fervens AG86] gi|256793646|gb|ACV24315.1| ribosomal protein S13P [Methanocaldococcus fervens AG86] Length = 150 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R++ ++ K+++ AL I+G+G ++ I + P++ L + EV +I + + Sbjct: 9 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTDEEVKKIEEIL 68 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + +E DL +I RL + CYRG+RH GLP Sbjct: 69 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMVVKQEDINRLKRVRCYRGIRHELGLPC 128 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 129 RGQRTKSTFR 138 >gi|200004049|ref|YP_002221383.1| ribosomal protein S13 [Blastocystis sp. NandII] gi|198385471|gb|ACH86064.1| ribosomal protein S13 [Blastocystis sp. NandII] Length = 115 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ-AIEQDYQVEGDLRRT 73 ++ L I+GI + ++ I L I V+ L + + QI + I+++Y + DL+ Sbjct: 15 LILVLNKIYGINTEQAKYILKNLGINTNISVNDLTQPLLKQINEFLIKKNYIINKDLQYK 74 Query: 74 VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 NIK + Y+G R + LP GQ TH+N +T KK Sbjct: 75 TNNNIKFKSLINTYKGFRLKNKLPCHGQNTHSNGKTAKK 113 >gi|325967787|ref|YP_004243979.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28] gi|323706990|gb|ADY00477.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28] Length = 158 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC L I P R+ QL + V ++ A+ Sbjct: 8 IVRIGDTDLDGFKPVAYALTKIRGIGIPTAYAICRYLGINPLIRLGQLDDETVRKLDWAV 67 Query: 61 EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 YQ DL +I + L ++G+RH GL VR Sbjct: 68 RNLYQFAPGWFVNRPKDPETGRNVHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127 Query: 100 GQRTHTNAR 108 GQRT T R Sbjct: 128 GQRTRTTGR 136 >gi|119719177|ref|YP_919672.1| 30S ribosomal protein S13P [Thermofilum pendens Hrk 5] gi|158706292|sp|A1RWT9|RS13_THEPD RecName: Full=30S ribosomal protein S13P gi|119524297|gb|ABL77669.1| SSU ribosomal protein S13P [Thermofilum pendens Hrk 5] Length = 157 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 22/120 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++P K +V AL I GIG ++Q + KL + P R + L E EV ++ A+ Sbjct: 8 IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + DL TV +I+ + + Y+G+RH GL V Sbjct: 68 REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127 >gi|126459585|ref|YP_001055863.1| 30S ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548] gi|158706268|sp|A3MUT0|RS13_PYRCJ RecName: Full=30S ribosomal protein S13P gi|126249306|gb|ABO08397.1| SSU ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548] Length = 153 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 28/145 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67 Query: 61 --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99 +D + DL + + KR +D L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 100 GQRTHTNAR-------TRKKFGKGG 117 GQRT T R T+KK GG Sbjct: 128 GQRTVTTGRFGATAGVTKKKAAPGG 152 >gi|18313810|ref|NP_560477.1| 30S ribosomal protein S13P [Pyrobaculum aerophilum str. IM2] gi|32363374|sp|Q8ZTV0|RS13_PYRAE RecName: Full=30S ribosomal protein S13P gi|18161371|gb|AAL64659.1| ribosomal protein S13 [Pyrobaculum aerophilum str. IM2] Length = 152 Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 26/144 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I GIG S+ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAV 67 Query: 61 --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99 +D + DL + + KR +D L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFG-KGGVARKR 122 GQRT T R FG GV +K+ Sbjct: 128 GQRTVTTGR----FGATAGVTKKK 147 >gi|200004021|ref|YP_002221356.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328] gi|198385445|gb|ACH86039.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328] Length = 116 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 43/93 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I+GI ++ I + L P ++ L + + + + Y + DL N K+ Sbjct: 22 IYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQFENNKKQK 81 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 + L Y G+R + LP GQ TH+NA T KK Sbjct: 82 ILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKLN 114 >gi|328874052|gb|EGG22418.1| protein serine/threonine phosphatase [Dictyostelium fasciculatum] Length = 2108 Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI N+ ++V+ AL + G G + + +C K I +R +L +E+ ++ + Sbjct: 391 RIYNTNVEGKRKVMYALTDVKGCGRRFANLVCKKADIDFSKRAGELSPAEIERVTTIMNH 450 Query: 63 DYQ--------------VEGDLRRTVA--MNIK------RLMDLGCYRGLRHRRGLPVRG 100 Q V+G + ++ ++IK RL + C RG+RH GL VRG Sbjct: 451 PRQYNIPSWFLNRQRDIVDGKYMQALSNVLDIKLREDLERLKKIRCQRGIRHHLGLKVRG 510 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q+T T R + GVA+K+ Sbjct: 511 QKTKTTGRRGRTV---GVAKKK 529 >gi|121706874|ref|XP_001271657.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1] gi|119399805|gb|EAW10231.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1] Length = 57 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/51 (54%), Positives = 33/51 (64%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++E DLRR V +IKRL + G YRG RH GLPVRGQRT T T K + Sbjct: 2 KIENDLRRQVLDDIKRLKETGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 52 >gi|300121915|emb|CBK22489.2| unnamed protein product [Blastocystis hominis] Length = 163 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 27/145 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++V AL I GIG + + +C K I RR +L E+ ++ I Sbjct: 23 ILRVLNTNIDGKQKIVYALTSIKGIGRRFAMAVCKKAEIDISRRAGELSNDEIEKLIAVI 82 Query: 61 EQDYQVE--------------GDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 Q + G R+ V+ N++ RL + RGLRH L V Sbjct: 83 STPLQFDIPEWFLNRQKDVETGKYRQVVSNNLQANLREDLNRLKKMRANRGLRHYWNLKV 142 Query: 99 RGQRTHTNARTRKKFGKG-GVARKR 122 RGQ T T R FGK GV+ K+ Sbjct: 143 RGQHTKTTGR----FGKSVGVSTKK 163 >gi|154279122|ref|XP_001540374.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412317|gb|EDN07704.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|225562357|gb|EEH10636.1| 40S ribosomal protein S13 [Ajellomyces capsulatus G186AR] Length = 92 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++ L +V+ + A+ + ++E DLRR + +I+RL D G RG RH GLPVRGQ T Sbjct: 11 KIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNT 69 Query: 104 HTNARTRKKFGK 115 + +T K K Sbjct: 70 RSQIKTAIKLNK 81 >gi|242219975|ref|XP_002475760.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia placenta Mad-698-R] gi|220725032|gb|EED79039.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia placenta Mad-698-R] Length = 169 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 50/165 (30%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV +P + AL + +GIG K++ +C ++ I +V L +++ + + Sbjct: 1 MVHILGVLLPDTQLAKFALTHFYGIGHKTAHRLCARVQIHETCKVRDLTSNQITALTAFL 60 Query: 61 EQ--------------------------------------------------DYQVEGDL 70 + ++E +L Sbjct: 61 SSPSTQPSLPRYTLATSNYVPPRVGEPVPENAATITSADGAPVKESLGDRLRNIKIESEL 120 Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 RR + NI +G Y G RH GLPVRGQ T TNA+T KK + Sbjct: 121 RREIRENIAHQRMIGSYVGRRHAMGLPVRGQNTQTNAKTAKKLNR 165 >gi|213646546|ref|ZP_03376599.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 71 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRR 72 + + VEGDLRR Sbjct: 61 AK-FVVEGDLRR 71 >gi|307595928|ref|YP_003902245.1| 30S ribosomal protein S13P [Vulcanisaeta distributa DSM 14429] gi|307551129|gb|ADN51194.1| ribosomal protein S13P [Vulcanisaeta distributa DSM 14429] Length = 160 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC L I P R+ QL + V ++ A+ Sbjct: 8 IVRIGDTDLDGFKPVAYALTKIRGIGISTAYAICRYLGINPSIRLGQLDDETVRKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +Q + DL +I + L ++G+RH GL VR Sbjct: 68 RNLHQFAPGWFVNRPKDPETGRNIHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127 Query: 100 GQRTHTNAR 108 GQRT T R Sbjct: 128 GQRTRTTGR 136 >gi|261201520|ref|XP_002627160.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081] gi|239592219|gb|EEQ74800.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081] gi|239611623|gb|EEQ88610.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ER-3] gi|327357911|gb|EGE86768.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ATCC 18188] Length = 92 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++ L +V+ + A+ + ++E DLRR + +I+RL D G RG RH GLPVRGQ T Sbjct: 11 KIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLRDTGTTRGRRHALGLPVRGQNT 69 Query: 104 HTNARTRKKFGK 115 + +T K K Sbjct: 70 RSQIKTAIKLNK 81 >gi|119872422|ref|YP_930429.1| 30S ribosomal protein S13P [Pyrobaculum islandicum DSM 4184] gi|158706269|sp|A1RT04|RS13_PYRIL RecName: Full=30S ribosomal protein S13P gi|119673830|gb|ABL88086.1| SSU ribosomal protein S13P [Pyrobaculum islandicum DSM 4184] Length = 153 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 28/145 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V +L I GIG ++ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAV 67 Query: 61 --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99 +D + DL + + KR +D L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGKDLHLIGAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNAR-------TRKKFGKGG 117 GQRT T R T+KK GG Sbjct: 128 GQRTVTTGRLGPVAGVTKKKAAAGG 152 >gi|171185873|ref|YP_001794792.1| 30S ribosomal protein S13P [Thermoproteus neutrophilus V24Sta] gi|170935085|gb|ACB40346.1| ribosomal protein S13 [Thermoproteus neutrophilus V24Sta] Length = 153 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 28/145 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I GIG ++ IC KL I P + L + ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYALAKIRGIGIATAYAICWKLGIDPHAVLGMLTDDQINKLDWAV 67 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + + +L ++ + L ++G+RH GL VR Sbjct: 68 RNLNELAPAWFLNRRKDPETGRELHLIGSELVLAAKKDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNAR-------TRKKFGKGG 117 GQRT T R T+KK GG Sbjct: 128 GQRTVTTGRFGATAGVTKKKAAAGG 152 >gi|13541393|ref|NP_111081.1| 30S ribosomal protein S13P [Thermoplasma volcanium GSS1] gi|32363380|sp|Q97B96|RS13_THEVO RecName: Full=30S ribosomal protein S13P gi|14324776|dbj|BAB59703.1| ribosomal protein small subunit S18 [Thermoplasma volcanium GSS1] Length = 171 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + I +L + P +++ +L E E+ ++++ + Sbjct: 31 IVRIANKDLNGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYV 90 Query: 61 E-QDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++Y V DL V +I + + Y+G+RH +G VR Sbjct: 91 ENKEYDLPDWLLNHRREPVTGKNLNLVTTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 100 GQRTHTNAR 108 GQRT +N R Sbjct: 151 GQRTRSNGR 159 >gi|302662738|ref|XP_003023020.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517] gi|291186996|gb|EFE42402.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517] Length = 88 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + I P V +L +V+ + A+ + ++E DL+R + NIKRL G YRG RH Sbjct: 3 RFHIHPTSTVGELATRQVLDLTGAL-SNMKIENDLKREILDNIKRLKTTGTYRGRRHALN 61 Query: 96 LPVRGQRT 103 LPVRGQ T Sbjct: 62 LPVRGQNT 69 >gi|110668837|ref|YP_658648.1| 30S ribosomal protein S13P [Haloquadratum walsbyi DSM 16790] gi|121684701|sp|Q18G53|RS13_HALWD RecName: Full=30S ribosomal protein S13P gi|109626584|emb|CAJ53048.1| ribosomal protein S13 [Haloquadratum walsbyi DSM 16790] Length = 173 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L + GIG ++++ I + ++ L E E+ I A+ Sbjct: 21 FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E D++ DL ++ R+ + Y+G+RH+RG VR Sbjct: 81 ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 141 GQRTKSTGRTEGTIG 155 >gi|156936975|ref|YP_001434771.1| 30S ribosomal protein S13P [Ignicoccus hospitalis KIN4/I] gi|156565959|gb|ABU81364.1| SSU ribosomal protein S13P [Ignicoccus hospitalis KIN4/I] Length = 152 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI +I + V L I GIG+ ++ I KL I P R+ L E+ + ++ + + Sbjct: 11 IVRIGDTDIDGSLPAVYGLAKIKGIGYTTALAILRKLGIDPHMRLGYLSETRIRELDEKV 70 Query: 61 E---------------QDYQVEGDLRRTVA-------MNIKRLMDLGCYRGLRHRRGLPV 98 +DY DL A +I+R + +RGLRH GL V Sbjct: 71 RDITQLGFPSWLYNRRKDYTTGKDLHLIGADLVFYARQDIEREKRIKSWRGLRHSLGLKV 130 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 131 RGQRTATTGR 140 >gi|76802056|ref|YP_327064.1| 30S ribosomal protein S13P [Natronomonas pharaonis DSM 2160] gi|121724406|sp|Q3IQT9|RS13_NATPD RecName: Full=30S ribosomal protein S13P gi|76557921|emb|CAI49505.1| ribosomal protein S13 [Natronomonas pharaonis DSM 2160] Length = 170 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL ++GIG + ++ I K + + L E ++ + A+ Sbjct: 18 FVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAV 77 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E+ +++ DL+ + +I R+ + YRG+RH+RG VR Sbjct: 78 EEYGDEVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVR 137 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 138 GQRTKSTGRTEGTIG 152 >gi|58261282|ref|XP_568051.1| 30s ribosomal protein s13 [Cryptococcus neoformans var. neoformans JEC21] gi|134115685|ref|XP_773556.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256182|gb|EAL18909.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230133|gb|AAW46534.1| 30s ribosomal protein s13, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 194 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 47/156 (30%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------- 56 + G N+P K + AL +GI S + +L I E V QL E +V + Sbjct: 3 LLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSSP 62 Query: 57 -------RQAIE---------------------------------QDYQVEGDLRRTVAM 76 Q IE D ++E + RR + Sbjct: 63 STTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQA 122 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +I L +G YRG RH G PV GQRT TNA++ KK Sbjct: 123 DIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKK 158 >gi|325958562|ref|YP_004290028.1| 30S ribosomal protein S13P [Methanobacterium sp. AL-21] gi|325329994|gb|ADZ09056.1| ribosomal protein S13P [Methanobacterium sp. AL-21] Length = 149 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+ ++ K + AL I GIG S+ +C ++ L + +V+++ +A+ Sbjct: 8 MVRISRKDVDGKKTIENALADIKGIGRALSRALCQVAGFDATMQIGYLPDKDVLKLEEAV 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + DY+ +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KAPQQFELPEWMLNRRNDYETGETVHLIESDLTMRLRDDLNRMKKTRSYKGRRHEVGLPV 127 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R K G Sbjct: 128 RGQRTKSTFRKGKSVG 143 >gi|145592095|ref|YP_001154097.1| 30S ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514] gi|158706267|sp|A4WM28|RS13_PYRAR RecName: Full=30S ribosomal protein S13P gi|145283863|gb|ABP51445.1| SSU ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514] Length = 152 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ K+V AL I GIG S+ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67 Query: 61 EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++V +L ++ + L ++G+RH GL VR Sbjct: 68 RNLHEVAPAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 100 GQRTHTNAR 108 GQRT T R Sbjct: 128 GQRTVTTGR 136 >gi|145512882|ref|XP_001442352.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409705|emb|CAK74955.1| unnamed protein product [Paramecium tetraurelia] Length = 150 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 E----------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 + ++YQV +L + +++R+ + C RGLRH GL VRGQ T Sbjct: 74 KSPRSLQHFQDEISRDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRVRGQHT 133 Query: 104 HTNARTRKKFG 114 T R + G Sbjct: 134 KTTGRGGQTLG 144 >gi|32363352|sp|Q8TRR2|RS13_METAC RecName: Full=30S ribosomal protein S13P Length = 162 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ AK V AL + G+G ++++ I + P + L E EV ++ AI Sbjct: 23 LVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAI 82 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 QD + G D+ T +I L + YRGLRH RGL VR Sbjct: 83 GKFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV+RK+ Sbjct: 143 GQRTKSTGRRGSTV---GVSRKK 162 >gi|147919301|ref|YP_686963.1| 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I] gi|121690302|sp|Q0W1V6|RS13_UNCMA RecName: Full=30S ribosomal protein S13P gi|110622359|emb|CAJ37637.1| putative 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I] Length = 224 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 28/149 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V AL I GIG + S+ I + + P + L +V ++R I Sbjct: 72 IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + +D + G DL V +I + + Y+G+RH RG VR Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191 Query: 100 GQRTHTNART-------RKKFGKGGVARK 121 GQRT + RT RKK +GG A+K Sbjct: 192 GQRTKSTGRTGATVGVVRKKGEQGGAAKK 220 >gi|20089977|ref|NP_616052.1| 30S ribosomal protein S13P [Methanosarcina acetivorans C2A] gi|19914940|gb|AAM04532.1| ribosomal protein S13p [Methanosarcina acetivorans C2A] Length = 182 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ AK V AL + G+G ++++ I + P + L E EV ++ AI Sbjct: 43 LVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAI 102 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 QD + G D+ T +I L + YRGLRH RGL VR Sbjct: 103 GKFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 162 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV+RK+ Sbjct: 163 GQRTKSTGRRGSTV---GVSRKK 182 >gi|329765794|ref|ZP_08257360.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137637|gb|EGG41907.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1] Length = 192 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP A++ + L I GIG+ + I + L I + L ES+V I + I Sbjct: 9 IVRIVGNDIPGARKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLI 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + D+ T+ +I+R +RG RH GL V Sbjct: 69 TNPIAGNFPPWFLNRRKDIETGSNMHLLTSDIPFTLRNDIERERITNSWRGYRHMYGLKV 128 Query: 99 RGQRTHTNARTRKKFGKGGVAR 120 RGQ T T R K G GVA+ Sbjct: 129 RGQCTRTTGR---KGGAVGVAK 147 >gi|302501654|ref|XP_003012819.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371] gi|291176379|gb|EFE32179.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371] Length = 92 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%) Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + I P V +L +V+ + A+ + ++E DL+R + NIKRL G YRG RH Sbjct: 3 RFHIHPTSTVGELATRQVLDLTGAL-SNMKIENDLKREILDNIKRLKTTGTYRGRRHALN 61 Query: 96 LPVRGQRT 103 LPVRGQ T Sbjct: 62 LPVRGQNT 69 >gi|84489671|ref|YP_447903.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091] gi|121722917|sp|Q2NFZ3|RS13_METST RecName: Full=30S ribosomal protein S13P gi|84372990|gb|ABC57260.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091] Length = 153 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI ++ + AL I GIG + IC L + + ++ + + V QI + Sbjct: 9 MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68 Query: 61 EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E DY+ +E DL T+ ++ R+ + Y+G RH GLPV Sbjct: 69 ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 129 RGQRTKSTFR 138 >gi|170291190|ref|YP_001738006.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8] gi|170175270|gb|ACB08323.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8] Length = 149 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ + K V+ AL + GI + I K I P R + +L + E +I + Sbjct: 9 IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ + D+ + +I + +G ++G+RH GL V Sbjct: 69 NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT T R K G Sbjct: 129 RGQRTKTTGRVGKTVG 144 >gi|321255209|ref|XP_003193346.1| 30s ribosomal protein s13 [Cryptococcus gattii WM276] gi|317459816|gb|ADV21559.1| 30s ribosomal protein s13, putative [Cryptococcus gattii WM276] Length = 194 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 60/156 (38%), Gaps = 47/156 (30%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------- 56 + G N+P K + AL +GI S + +L I E V QL E ++ + Sbjct: 3 LLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQLTALSAYLSSP 62 Query: 57 -------RQAIE---------------------------------QDYQVEGDLRRTVAM 76 Q +E D ++E + RR + Sbjct: 63 STTARPSEQQLELAPPGGKVLKPVGHPAIFGGLNKGKGKGQEDPLDDLKIETEKRRAMQA 122 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +I L +G YRG RH G PV GQRT TNA+T KK Sbjct: 123 DIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKTAKK 158 >gi|257053588|ref|YP_003131421.1| 30S ribosomal protein S13P [Halorhabdus utahensis DSM 12940] gi|256692351|gb|ACV12688.1| ribosomal protein S13 [Halorhabdus utahensis DSM 12940] Length = 176 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL ++GIG ++++ I N + I +L + ++ I + Sbjct: 20 FVRIGQTDLDGTKSVERALTDMNGIGQRAARIIANDVDIDRRETFGRLEDDQIEAIVDRV 79 Query: 61 E--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E D+ ++ DL T +I R+ + Y+G+RH+RG VR Sbjct: 80 EGFADDVPEWLANHRNDFFDGETTHEIGTDLSLTRRQDINRMKMINAYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 140 GQRTKSTGRTEGTIG 154 >gi|294495901|ref|YP_003542394.1| 30S ribosomal protein S13P [Methanohalophilus mahii DSM 5219] gi|292666900|gb|ADE36749.1| SSU ribosomal protein S13P [Methanohalophilus mahii DSM 5219] Length = 148 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ ++V+ AL I GIG ++++ I + P + L + + ++ +AI Sbjct: 9 LVRIMNTDLQGKQKVLYALTGIKGIGRRTARLIAESAEVDPSETIGYLSDEGIARLNEAI 68 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++ + G D+ T+ ++ L + YRG+RH RGL VR Sbjct: 69 ETFENHLPVWMLNRQKDLLTGENKHILGQDIDLTIREDLNDLKKIRAYRGIRHERGLKVR 128 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R G Sbjct: 129 GQRTKSAGRGGSTIG 143 >gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49] gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49] gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1] gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG] Length = 156 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--Q 58 + RI N+ ++VV AL I GIG + S IC K I +R +L E+ ++ Sbjct: 14 ILRILNTNVDGREKVVVALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73 Query: 59 AIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q +++ +G + VA +++RL + +RGLRH GL V Sbjct: 74 STPQQFKIPTWFLNRQKDVKDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|159041085|ref|YP_001540337.1| 30S ribosomal protein S13P [Caldivirga maquilingensis IC-167] gi|157919920|gb|ABW01347.1| ribosomal protein S13 [Caldivirga maquilingensis IC-167] Length = 162 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + I ++ +K V AL I GIG ++ IC L I P ++ +L E + +I A+ Sbjct: 10 IVHIGDTDLDGSKAVAYALARIKGIGVSTAVAICRNLGINPLVKLGELNEEMIRKIDWAV 69 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +Q + DL T +I+R + +RG+RH GL VR Sbjct: 70 RNLHQAAPAWFVNRPKDPETGRNIHLIGADLILTARNDIERERRILSWRGIRHNLGLKVR 129 Query: 100 GQRTHTNAR 108 GQRT T R Sbjct: 130 GQRTRTTGR 138 >gi|312137106|ref|YP_004004443.1| ssu ribosomal protein s13p [Methanothermus fervidus DSM 2088] gi|311224825|gb|ADP77681.1| SSU ribosomal protein S13P [Methanothermus fervidus DSM 2088] Length = 148 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 23/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A ++ K V A+ I GIG + I +++ L + E+ ++ AI Sbjct: 8 IVRLARRDLDGNKNVEEAITGIKGIGKALGKAIARVTGFEG-KKIGYLSDEELEKLEDAI 66 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ +E DL T+ +I RL + YRG+RH GLPV Sbjct: 67 ENPGNYGIPSWMFNRKKDYRTGENKHLIEADLEMTIREDINRLKRIRSYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R + G Sbjct: 127 RGQRTKSTFRKGQTVG 142 >gi|295672670|ref|XP_002796881.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01] gi|226282253|gb|EEH37819.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01] Length = 114 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 44 RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++ L +++ + A+ + ++E DLRR + +I+RL D+G RG RH GLPVRGQRT Sbjct: 11 KIGDLGNKQILSLTAALSE-MKIENDLRRQILNDIQRLKDIGTIRGRRHALGLPVRGQRT 69 Query: 104 HT 105 + Sbjct: 70 RS 71 >gi|300711114|ref|YP_003736928.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3] gi|299124797|gb|ADJ15136.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3] Length = 168 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 20/134 (14%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ I I +L + E+ I + + Sbjct: 20 FVRIGQTDLDGTKTVERSLSEMNGIGRRAARIIAQNAGISRTATFGRLEDDEIDAIVEEV 79 Query: 61 E-------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E Q Y + DL T +I RL + YRG+RH+RG VRG Sbjct: 80 EGFAENNPEWLANHQGYYDGEITHETGNDLELTRRQDINRLQMISAYRGVRHQRGQKVRG 139 Query: 101 QRTHTNARTRKKFG 114 QRT + R+ G Sbjct: 140 QRTRSTGRSEGTIG 153 >gi|15678064|ref|NP_275178.1| 30S ribosomal protein S13P [Methanothermobacter thermautotrophicus str. Delta H] gi|3122789|sp|O26141|RS13_METTH RecName: Full=30S ribosomal protein S13P gi|2621070|gb|AAB84542.1| ribosomal protein S18 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 149 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIA +I K + AL I G+G S+ I +R+ L + E+ ++ +AI Sbjct: 8 MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67 Query: 61 EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + DY+ +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + T +K GV RK+ Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148 >gi|55376996|ref|YP_134846.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049] gi|266965|sp|Q00861|RS13_HALMA RecName: Full=30S ribosomal protein S13P; AltName: Full=HmaS13 gi|148770|gb|AAA73209.1| ribosomal protein HmaS13 [Haloarcula marismortui] gi|55229721|gb|AAV45140.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049] Length = 177 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 23/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-IRQA 59 RI ++ K V RAL ++GIG ++++ I K + R V ++ +VI+ + + Sbjct: 23 FVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVD-RRAVFGKLDDDVIERVVER 81 Query: 60 IE--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +E +DY + DL+ T +I R+ + YRG+RH+RG V Sbjct: 82 VENFADDVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKV 141 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + RT G Sbjct: 142 RGQRTKSTGRTEGTIG 157 >gi|114329815|ref|YP_740719.1| ribosomal protein S13 [Tetrahymena malaccensis] gi|114150048|gb|ABI51628.1| ribosomal protein S13 [Tetrahymena malaccensis] Length = 276 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 27/40 (67%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 L+ + NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 73 LKNRIDTNIFFLEFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|167042556|gb|ABZ07280.1| putative ribosomal protein S13/S18 [uncultured marine microorganism HF4000_ANIW133F6] Length = 155 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+A +I + + + L I G+G +++ +C+ I + L + E +IR I++ Sbjct: 18 RLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTIDE 77 Query: 63 --------------DYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 D Q D ++ T+ +I RL + YRG+RHR G VRGQ Sbjct: 78 YALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVRGQ 137 Query: 102 RTHTNARTRKKFG 114 R +N R+ G Sbjct: 138 RLRSNGRSGATLG 150 >gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool] Length = 156 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--Q 58 + RI N+ ++VV AL I GIG + S IC K I +R +L E+ ++ Sbjct: 14 ILRILNTNVDGREKVVIALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73 Query: 59 AIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q +++ +G + VA +++RL + +RGLRH GL V Sbjct: 74 STPQQFKIPTWFLNRQKDVRDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|91772118|ref|YP_564810.1| 30S ribosomal protein S13P [Methanococcoides burtonii DSM 6242] gi|121684548|sp|Q12ZR6|RS13_METBU RecName: Full=30S ribosomal protein S13P gi|91711133|gb|ABE51060.1| SSU ribosomal protein S13P [Methanococcoides burtonii DSM 6242] Length = 148 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++S+ I + I P + L + ++ ++ I Sbjct: 9 LVRIMNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTI 68 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + D+ T+ ++ L YRGLRH RGL VR Sbjct: 69 DKFEEQLPKWMLNRQFDPLTGENKHLLGQDIILTLKEDLNDLKKSRAYRGLRHERGLKVR 128 Query: 100 GQRTHTNAR 108 GQRT + R Sbjct: 129 GQRTKSTGR 137 >gi|114329906|ref|YP_740808.1| ribosomal protein S13 [Tetrahymena pigmentosa] gi|114150139|gb|ABI51717.1| ribosomal protein S13 [Tetrahymena pigmentosa] Length = 276 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 35/60 (58%) Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +SE + + I + + ++ V NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 53 DSEWKKFKSIILKFFPKSRSIKNRVDCNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|291334094|gb|ADD93766.1| putative ribosomal protein S13/S18 [uncultured marine bacterium MedDCM-OCT-S05-C222] Length = 155 Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 24/141 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+A ++ K + AL + G+G +++ IC P L + +R+AIE Sbjct: 18 RMADTDMDGLKTLATALTAVKGVGPRTAIQICKNTGFDPASLAGHLSAEQQETLREAIEG 77 Query: 62 -------------QDYQVEGDLRRT---VAM----NIKRLMDLGCYRGLRHRRGLPVRGQ 101 +D + +L T V++ +I RL + CYRG+RH G VRGQ Sbjct: 78 YAETVPLWMLNRQRDLETGDELHLTGQQVSLTFEDDINRLRTMKCYRGVRHASGNKVRGQ 137 Query: 102 RTHTNARTRKKFGKGGVARKR 122 R +N R GV+RK+ Sbjct: 138 RGRSNGRGGLTL---GVSRKK 155 >gi|21228257|ref|NP_634179.1| 30S ribosomal protein S13P [Methanosarcina mazei Go1] gi|32363348|sp|Q8PV19|RS13_METMA RecName: Full=30S ribosomal protein S13P gi|20906714|gb|AAM31851.1| SSU ribosomal protein S13P [Methanosarcina mazei Go1] Length = 162 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ AK V AL + GIG +++ I + P + L + EV ++ AI Sbjct: 23 LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAI 82 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 QD + G D+ T +I L + YRGLRH RGL VR Sbjct: 83 GKFEEIVPSWMLNRQKDLTTGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV+RK+ Sbjct: 143 GQRTKSTGRRGSTV---GVSRKK 162 >gi|73667630|ref|YP_303645.1| 30S ribosomal protein S13P [Methanosarcina barkeri str. Fusaro] gi|91207705|sp|Q46GC7|RS13_METBF RecName: Full=30S ribosomal protein S13P gi|72394792|gb|AAZ69065.1| SSU ribosomal protein S13P [Methanosarcina barkeri str. Fusaro] Length = 162 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ AK V AL + GIG +++ I + P + L + EV ++ +AI Sbjct: 23 LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAI 82 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 QD + G D+ T +I L + YRGLRH RGL VR Sbjct: 83 GNFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142 Query: 100 GQRTHTNAR 108 GQRT + R Sbjct: 143 GQRTKSTGR 151 >gi|304314284|ref|YP_003849431.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str. Marburg] gi|302587743|gb|ADL58118.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str. Marburg] Length = 149 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIA +I K + AL I G+G S+ I +R+ L + E+ ++ +AI Sbjct: 8 MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67 Query: 61 EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + DY+ +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KNPAKYNIPSWMINRRNDYETGEDKHLIESDLDMCLREDLNRMRKTRSYKGRRHELGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + T +K GV RK+ Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148 >gi|145539402|ref|XP_001455391.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423199|emb|CAK87994.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLSKRAGELTDDEAHKITEVI 73 Query: 61 E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 134 RGQHTKTTGRGGQTLG 149 >gi|11465886|ref|NP_066435.1| ribosomal protein S13 [Ochromonas danica] gi|10505219|gb|AAG18401.1|AF287134_26 ribosomal protein S13 [Ochromonas danica] Length = 125 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/43 (55%), Positives = 30/43 (69%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 L+ NI L++ YRG RH++ LPVRGQRTHTNA+T KK Sbjct: 55 LKEFDKKNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKK 97 >gi|167042197|gb|ABZ06929.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote HF4000_ANIW93I24] Length = 180 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 22/116 (18%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-------------- 60 +V L I G+G+ + I N L I P +R+ L +V I I Sbjct: 1 MVVGLTKIRGVGYMFANTIINVLKINPNQRIGYLSPEQVKSIESIIKNPSASNFPSWFLN 60 Query: 61 --------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 E + + D+ TV +I+R G +RG+RH GL VRGQRT R Sbjct: 61 RRKDIETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVRGQRTRCTGR 116 >gi|16082067|ref|NP_394493.1| 30S ribosomal protein S13P [Thermoplasma acidophilum DSM 1728] gi|32363410|sp|Q9HJD6|RS13_THEAC RecName: Full=30S ribosomal protein S13P gi|10640348|emb|CAC12162.1| probable ribosomal protein S13 [Thermoplasma acidophilum] Length = 171 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + I +L +P ++++ +L E ++ ++R+ + Sbjct: 31 IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90 Query: 61 E-QDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++Y V DL V +I + + Y+G+RH +G VR Sbjct: 91 EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 100 GQRTHTNAR 108 GQRT +N R Sbjct: 151 GQRTRSNGR 159 >gi|209880283|ref|XP_002141581.1| 40S ribosomal protein S18 [Cryptosporidium muris RN66] gi|209557187|gb|EEA07232.1| 40S ribosomal protein S18, putative [Cryptosporidium muris RN66] Length = 153 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 RI N+ ++V+ AL I GIG + S +C K + +R QL + EV +I Sbjct: 15 RIMNTNVDGRQKVMYALTAIKGIGRRFSNIVCKKADVDLRKRAGQLTQDEVNRIVAIVTN 74 Query: 57 ------------RQAIEQD----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ +D + +L ++ +++RL + +RGLRH G+ VRG Sbjct: 75 PLQFNIPSYMLNRQRDLKDGKYKHMTSNNLEASLREDLERLKKIRSHRGLRHHWGIRVRG 134 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 135 QHTKTTGR 142 >gi|11466256|ref|NP_049571.1| ribosomal protein S13 [Tetrahymena pyriformis] gi|5306132|gb|AAD41916.1|AF160864_4 ribosomal protein S13 [Tetrahymena pyriformis] Length = 276 Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/41 (58%), Positives = 28/41 (68%) Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +L+ V NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 72 NLKNRVDCNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|145479337|ref|XP_001425691.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145534229|ref|XP_001452859.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392763|emb|CAK58293.1| unnamed protein product [Paramecium tetraurelia] gi|124420558|emb|CAK85462.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 134 RGQHTKTTGRGGQTLG 149 >gi|145483041|ref|XP_001427543.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394625|emb|CAK60145.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 134 RGQHTKTTGRGGQTLG 149 >gi|15027633|ref|NP_149367.1| ribosomal protein S13 [Tetrahymena thermophila] gi|15011469|gb|AAK77564.1|AF396436_4 ribosomal protein S13 [Tetrahymena thermophila] Length = 276 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++E + + + + L+ + NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 53 DTEWKKFKSILSTFFPKSRSLKNRMDTNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|330506853|ref|YP_004383281.1| 30S ribosomal protein S13p/S18e [Methanosaeta concilii GP-6] gi|328927661|gb|AEB67463.1| ribosomal protein S13p/S18e [Methanosaeta concilii GP-6] Length = 181 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ ++V AL I G+G + ++ + + P + L ++E+ ++++ + Sbjct: 29 IVRILNTDLAGKRQVHMALTGIKGVGRRCAKIFTERAGVDPNATLGLLPDAEIDKLKKVV 88 Query: 61 EQD---------------------YQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E+D + G DL T+ ++ + + Y+GLRH RGL V Sbjct: 89 EEDAINILPVWMVNRRGDIETGKDIHIMGMDLNMTLREDLDLMKKMRSYKGLRHERGLRV 148 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T + RT GV+RKR Sbjct: 149 RGQKTRSTGRTGAIV---GVSRKR 169 >gi|161527833|ref|YP_001581659.1| 30S ribosomal protein S13P [Nitrosopumilus maritimus SCM1] gi|160339134|gb|ABX12221.1| ribosomal protein S13 [Nitrosopumilus maritimus SCM1] Length = 194 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP ++++ L I GIG+ + I + L I + L + V I + I Sbjct: 12 IVRIVGNDIPGERKMLVGLTQIKGIGYNFATAILDTLNIDSNSNIGHLTDENVQAIEKLI 71 Query: 61 E---------------QDYQVEGDLRR-------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 +D + DL T+ +I+R +RG RH GL V Sbjct: 72 TNPAEGNFPTWFLNRRKDIETGNDLHLLTSDIPFTLRNDIERERVTASWRGYRHLSGLKV 131 Query: 99 RGQRTHTNAR 108 RGQRT T+ R Sbjct: 132 RGQRTRTSGR 141 >gi|195653817|gb|ACG46376.1| 30S ribosomal protein S13 [Zea mays] Length = 124 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKITKDLSEEEVITLRKEVGK 105 Query: 63 DYQVEGDLRR 72 Y +EGDL+R Sbjct: 106 -YMIEGDLKR 114 >gi|302690598|ref|XP_003034978.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8] gi|300108674|gb|EFJ00076.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8] Length = 171 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 33/53 (62%) Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E +LRR + NI +G Y GLRH LPVRGQ T +NA+T KK + Sbjct: 115 NLRIESELRREIRENIAHQRMIGSYVGLRHAMHLPVRGQNTQSNAKTAKKLNQ 167 >gi|296085211|emb|CBI28706.3| unnamed protein product [Vitis vinifera] Length = 912 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 774 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVAN 833 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 834 PRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 893 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 894 QHTKTTGRRGKTV---GVSKKR 912 >gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7] gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7] Length = 156 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V+ AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIM 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++R+ + +RGLRH GL V Sbjct: 74 STPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|33521690|gb|AAQ21388.1| ribosomal protein S18 [Ixodes ricinus] Length = 152 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71 Query: 57 ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|156847769|ref|XP_001646768.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM 70294] gi|156117448|gb|EDO18910.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM 70294] Length = 146 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL YI G+G + + +C K + +R +L + E+ ++ Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 73 Query: 61 E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY + ++ + +++RL + +RG+RH GL V Sbjct: 74 QNPTNFKIPAWFLNRQKDVNDGKDYHSLANNIESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|301117146|ref|XP_002906301.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4] gi|262107650|gb|EEY65702.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4] Length = 152 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V AL I G+G + S +C K + +R +L E+ ++ I Sbjct: 12 ILRILNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDVTKRAGELTNDEIERVVAII 71 Query: 61 EQDYQVE--------------GDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 + Q + G + VA N++ RL + +RGLRH GL V Sbjct: 72 QNPLQFKIPVWFLNRQKDFKTGKHSQVVANNLQGKWREDYERLKKIYAHRGLRHWWGLKV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|67083901|gb|AAY66885.1| ribosomal protein S18 [Ixodes scapularis] Length = 153 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71 Query: 57 ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|15922391|ref|NP_378060.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7] gi|32363379|sp|Q96YV7|RS13_SULTO RecName: Full=30S ribosomal protein S13P gi|15623180|dbj|BAB67169.1| 172aa long hypothetical 30S ribosomal protein S13 [Sulfolobus tokodaii str. 7] Length = 172 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 22/123 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ +V AL + GIG+ +++ I KL + +RR+ +L + ++ +I + Sbjct: 10 IVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYL 69 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R + +RG+RH GL V Sbjct: 70 TDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKV 129 Query: 99 RGQ 101 RGQ Sbjct: 130 RGQ 132 >gi|255717919|ref|XP_002555240.1| KLTH0G04664p [Lachancea thermotolerans] gi|238936624|emb|CAR24803.1| KLTH0G04664p [Lachancea thermotolerans] Length = 146 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++V AL I G+G + + +C K + ++R +L + E ++QI Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLVCKKADVSLQKRAGELTQEELERIVQIM 73 Query: 58 QAIEQ------------------DYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q DY + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTQYKIPAWFLNRQKDVNDGKDYHNLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRKR 145 >gi|323455964|gb|EGB11831.1| hypothetical protein AURANDRAFT_20379 [Aureococcus anophagefferens] Length = 154 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ NI ++V+ AL I G+G + S +C K A+ +R +L EV ++ I Sbjct: 17 RVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQN 76 Query: 61 -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ L++ + +++RL + +RGLRH G+ VRG Sbjct: 77 PKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRVRG 136 Query: 101 QRTHTNAR 108 Q T + R Sbjct: 137 QHTKSTGR 144 >gi|50288491|ref|XP_446675.1| hypothetical protein [Candida glabrata CBS 138] gi|49525983|emb|CAG59602.1| unnamed protein product [Candida glabrata] Length = 147 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 30/136 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++V AL I G+G + + +C K + +R +L + E V+QI Sbjct: 15 ILRLLNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 74 Query: 58 QAIEQ------------------DY-----QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 Q Q DY QVE LR +++RL + +RG+RH Sbjct: 75 QNPTQYKIPAWFLNRQRDIADGKDYHTLANQVESKLRD----DLERLKKIRAHRGIRHFW 130 Query: 95 GLPVRGQRTHTNARTR 110 GL VRGQ T T R R Sbjct: 131 GLRVRGQHTKTTGRRR 146 >gi|268324996|emb|CBH38584.1| 30S ribosomal protein S13P [uncultured archaeon] Length = 167 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ + V +LC ++GIG + ++ + I + ++ L + EV +++ AI Sbjct: 15 FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74 Query: 61 EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 D + G DL +I L + YRG+RH RGL VR Sbjct: 75 NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134 Query: 100 GQRTHTNAR 108 GQRT R Sbjct: 135 GQRTKATGR 143 >gi|49258832|pdb|1S1H|M Chain M, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 132 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 2 RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 61 Query: 62 -------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRG 100 Q+ +G T+A N++ RL + +RG+RH GL VRG Sbjct: 62 PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 121 Query: 101 QRTHTNARTR 110 Q T T R R Sbjct: 122 QHTKTTGRRR 131 >gi|298674774|ref|YP_003726524.1| 30S ribosomal protein S13P [Methanohalobium evestigatum Z-7303] gi|298287762|gb|ADI73728.1| ribosomal protein S13P [Methanohalobium evestigatum Z-7303] Length = 149 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++P + V AL I GIG +++ + I P+ ++ L + E+ + I Sbjct: 9 LVRVMNTDLPGDQPVRLALTGIKGIGRRTANIVVEGSGIDPDTKIGYLSDEEIDTLNSTI 68 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + D+ ++ ++ L YRG+RH RGL VR Sbjct: 69 NNFESHLPSWMLNRQNDPYSGENKHLLGQDIFMSLREDVNTLKKTRAYRGVRHERGLKVR 128 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV++K+ Sbjct: 129 GQRTKSTGRGGSTI---GVSKKK 148 >gi|6320658|ref|NP_010738.1| Rps18ap [Saccharomyces cerevisiae S288c] gi|6323615|ref|NP_013686.1| Rps18bp [Saccharomyces cerevisiae S288c] gi|1350951|sp|P35271|RS18_YEAST RecName: Full=40S ribosomal protein S18 gi|313103676|pdb|3IZB|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113459|pdb|3O2Z|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113487|pdb|3O30|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|575693|emb|CAA86629.1| unnamed protein product [Saccharomyces cerevisiae] gi|927725|gb|AAB64891.1| Ydr450wp [Saccharomyces cerevisiae] gi|151942415|gb|EDN60771.1| ribosomal protein S18A [Saccharomyces cerevisiae YJM789] gi|151946135|gb|EDN64366.1| ribosomal protein S18B [Saccharomyces cerevisiae YJM789] gi|190408214|gb|EDV11479.1| ribosomal protein S18A [Saccharomyces cerevisiae RM11-1a] gi|259145683|emb|CAY78947.1| Rps18ap [Saccharomyces cerevisiae EC1118] gi|259148549|emb|CAY81794.1| Rps18bp [Saccharomyces cerevisiae EC1118] gi|285811461|tpg|DAA12285.1| TPA: Rps18ap [Saccharomyces cerevisiae S288c] gi|285813977|tpg|DAA09872.1| TPA: Rps18bp [Saccharomyces cerevisiae S288c] Length = 146 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 + Q+ +G T+A N++ RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|302680575|ref|XP_003029969.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8] gi|300103660|gb|EFI95066.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8] Length = 156 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++++ AL I G+G + S +C K + +R +L E ++ I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 58 QAIEQ------------------DYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q DYQ+ + + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKDYQILSNGIDSKLRDDLERLKKIRAHRGLRHYWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|284165825|ref|YP_003404104.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511] gi|284015480|gb|ADB61431.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511] Length = 174 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP--------PERRVHQLVES- 51 RI ++ K V R+L ++G+G ++++ I ++ + + + ++VE+ Sbjct: 18 FVRIGQTDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETV 77 Query: 52 --------EVIQIRQAI----EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + RQ+ E +++ DL+ T +I R+ + Y+G RH+RG VR Sbjct: 78 ENYAEEVPDWLNNRQSDFYTGETTHEIGNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVR 137 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 138 GQRTKSTGRTEGTIG 152 >gi|224085191|ref|XP_002307515.1| predicted protein [Populus trichocarpa] gi|222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa] Length = 152 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + S +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFSNIVCKKADVDMNKRAGELSAAELDNLMTIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|281500818|pdb|3JYV|M Chain M, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 130 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 1 RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 60 Query: 62 -------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRG 100 Q+ +G T+A N++ RL + +RG+RH GL VRG Sbjct: 61 PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 120 Query: 101 QRTHTNARTR 110 Q T T R R Sbjct: 121 QHTKTTGRRR 130 >gi|289580104|ref|YP_003478570.1| ribosomal protein S13P [Natrialba magadii ATCC 43099] gi|289529657|gb|ADD04008.1| ribosomal protein S13P [Natrialba magadii ATCC 43099] Length = 171 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPER---RVHQLVESEVIQI- 56 RI ++ K V R+L ++GIG ++++ I K + R+ + V EV+ + Sbjct: 17 FVRIGQTDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLV 76 Query: 57 -------------RQ----AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 RQ + E +++ DL+ + +I R+ + Y+G+RH+RG VR Sbjct: 77 ENYAEEVPDWLNNRQNDFYSGETTHEIGNDLQLSRQHDINRMKMIDSYKGVRHKRGQKVR 136 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 137 GQRTKSTGRTEGTIG 151 >gi|114329861|ref|YP_740764.1| ribosomal protein S13 [Tetrahymena paravorax] gi|114150094|gb|ABI51673.1| ribosomal protein S13 [Tetrahymena paravorax] Length = 276 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/34 (61%), Positives = 25/34 (73%) Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 +NI L + YRGLRH +GLPVRGQRT TNA + Sbjct: 79 INIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|195998744|ref|XP_002109240.1| ribosomal protein S18 [Trichoplax adhaerens] gi|190587364|gb|EDV27406.1| ribosomal protein S18 [Trichoplax adhaerens] Length = 153 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ G NI +++ AL I G G + + +C K + ++R +L E E VI I Sbjct: 13 ILRVMGTNIDGRVKIMFALTAIKGCGRRFANIVCKKAGVDIDKRAGELTEDEIDKVITIM 72 Query: 58 QAIEQ----DYQV-------EGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 Q Q D+ + +G + ++ N++ RL + +RG+RH GL V Sbjct: 73 QNPRQYKIPDWFLNRQKDIKDGKFSQVLSNNLETKLREDLERLKKVRAHRGIRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 133 RGQHTKTTGRKGRTV---GVAKKK 153 >gi|146422129|ref|XP_001487006.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260] gi|146388127|gb|EDK36285.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260] Length = 145 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + S +C K + ++R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIM 73 Query: 61 E--------------QDYQVEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98 + Q QV+G +A N ++RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNMESKLRDDLERLKKIRAHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|149286992|gb|ABR23395.1| ribosomal protein S18 [Ornithodoros parkeri] Length = 153 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELSEEEVEKLITIM 71 Query: 57 ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88] gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger] Length = 155 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++++ AL I G+G + S +C K + +R +L E ++ I Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 58 QAIEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q+ Q D QV L + +++RL + +RGLRH GL V Sbjct: 74 QSPTQYKIPTWFLNRQRDITDGKDSQVVSNSLDSKIREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|22653468|gb|AAN04078.1| ribosomal protein S13 [Amoebidium parasiticum] Length = 130 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%) Query: 22 IHGIGFKSSQDICNKLAIPPE--RRVHQLVESEV-------IQIRQAIEQDYQ---VEGD 69 ++GIG K I +L + R V S++ ++ I D+ +E + Sbjct: 26 VYGIGEKEYATISVQLGLSSNQGRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIEQN 85 Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 LR + I L ++ Y+G+RH++GLPV GQRT TNA Sbjct: 86 LRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNA 123 >gi|305662631|ref|YP_003858919.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230] gi|304377200|gb|ADM27039.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230] Length = 156 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A +I + L + GIG+ + IC L + P + + + E+ +I + + Sbjct: 8 IVRVAETDIAGELSLSWGLSRVKGIGYNMAIAICRILGLDPSMPIGFITDQEIEKIEELL 67 Query: 61 E---------------QDYQVEGDLRRTVA-------MNIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ D+ + +I R + + +RG+RH G V Sbjct: 68 KNPQKYGIPVWFLNRRKDYETGNDMHLVSSELIYYARQDIDREIRIRSWRGIRHAMGYKV 127 Query: 99 RGQRTHTNAR 108 RGQRTHT R Sbjct: 128 RGQRTHTTGR 137 >gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4] gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550) [Aspergillus nidulans FGSC A4] Length = 155 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL + G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTIL 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DYQV + L +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA] gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii str. 17XNL] gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii] gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei] Length = 156 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++R+ + +RGLRH GL V Sbjct: 74 SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|13877525|gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana] gi|17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana] Length = 152 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKTDVDMNKRAGELSAAEIDNLMTIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|256270865|gb|EEU06003.1| Rps18bp [Saccharomyces cerevisiae JAY291] Length = 146 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 + Q+ G T+A N++ RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQNDITNGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|318086970|gb|ADV40077.1| ribosomal protein S18 [Latrodectus hesperus] Length = 153 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ Sbjct: 12 ILRVMNTNIDGRRKVMFALTAIKGVGRRFSNLVCKKADVDLNKRAGELSEEEVEKLITIM 71 Query: 57 ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ QV + L + +++RL + ++GLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNGLENKLREDLERLKKIRAHKGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|170592174|ref|XP_001900844.1| 40S ribosomal protein S18 [Brugia malayi] gi|158591711|gb|EDP30315.1| 40S ribosomal protein S18, putative [Brugia malayi] Length = 154 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I RR +L E ++ +++Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKYSQMLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|156372342|ref|XP_001628997.1| predicted protein [Nematostella vectensis] gi|156215987|gb|EDO36934.1| predicted protein [Nematostella vectensis] Length = 153 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++++ A+ I G+G + + +C K I +R +L E EV ++ Sbjct: 14 RVLNTNIDGKQKIMFAMTSIKGVGRRYANIVCKKADIDMNKRAGELTEDEVERVVTIMQN 73 Query: 57 ------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ +D + + L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDHKDGKYSQILANGLDNKMREDLERLKKIRAHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GVA+K+ Sbjct: 134 QHTKTTGRKGRTV---GVAKKK 152 >gi|149234674|ref|XP_001523216.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239] gi|146453005|gb|EDK47261.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239] Length = 145 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + S +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIM 73 Query: 61 E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 + Q QV+G +A N++ RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|312082633|ref|XP_003143525.1| 40S ribosomal protein S18 [Loa loa] gi|307761312|gb|EFO20546.1| 40S ribosomal protein S18 [Loa loa] Length = 154 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I RR +L E ++ +++Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKYSQVLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|154313500|ref|XP_001556076.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10] gi|150849516|gb|EDN24709.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10] Length = 82 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +E +L+R + NI+R+ +G YRG RH GLPVRGQ T + T +K K +A Sbjct: 3 LETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNKDCIA 56 >gi|15219950|ref|NP_173692.1| PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding / structural constituent of ribosome [Arabidopsis thaliana] gi|15234790|ref|NP_192718.1| RPS18C (S18 RIBOSOMAL PROTEIN); RNA binding / nucleic acid binding / structural constituent of ribosome [Arabidopsis thaliana] gi|18399100|ref|NP_564434.1| 40S ribosomal protein S18 (RPS18B) [Arabidopsis thaliana] gi|297809155|ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp. lyrata] gi|297845304|ref|XP_002890533.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp. lyrata] gi|297851838|ref|XP_002893800.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp. lyrata] gi|464707|sp|P34788|RS18_ARATH RecName: Full=40S ribosomal protein S18 gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein S18 [Arabidopsis thaliana] gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal protein S18; 25853-24673 [Arabidopsis thaliana] gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal protein [Arabidopsis thaliana] gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5 [Arabidopsis thaliana] gi|405613|emb|CAA80684.1| ribosomal protein S18A [Arabidopsis thaliana] gi|434343|emb|CAA82273.1| S18 ribosomal protein [Arabidopsis thaliana] gi|434345|emb|CAA82274.1| S18 ribosomal protein [Arabidopsis thaliana] gi|434906|emb|CAA82275.1| S18 ribosomal protein [Arabidopsis thaliana] gi|2505871|emb|CAA72909.1| ribosomal protein S18A [Arabidopsis thaliana] gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A. thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and gb|R30430 come from this gene [Arabidopsis thaliana] gi|4538910|emb|CAB39647.1| S18.A ribosomal protein [Arabidopsis thaliana] gi|7267675|emb|CAB78103.1| S18.A ribosomal protein [Arabidopsis thaliana] gi|14334584|gb|AAK59471.1| putative ribosomal protein S18 [Arabidopsis thaliana] gi|17979113|gb|AAL47500.1| putative ribosomal protein S18 [Arabidopsis thaliana] gi|21555397|gb|AAM63849.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|21592452|gb|AAM64403.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|21593027|gb|AAM64976.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis thaliana] gi|56236126|gb|AAV84519.1| At1g22780 [Arabidopsis thaliana] gi|98961089|gb|ABF59028.1| At1g22780 [Arabidopsis thaliana] gi|145713244|gb|ABP96570.1| pointed first leaf [Arabidopsis thaliana] gi|145713246|gb|ABP96571.1| pointed first leaf [Arabidopsis thaliana] gi|145713248|gb|ABP96572.1| pointed first leaf [Arabidopsis thaliana] gi|145713250|gb|ABP96573.1| pointed first leaf [Arabidopsis thaliana] gi|145713252|gb|ABP96574.1| pointed first leaf [Arabidopsis thaliana] gi|145713254|gb|ABP96575.1| pointed first leaf [Arabidopsis thaliana] gi|145713256|gb|ABP96576.1| pointed first leaf [Arabidopsis thaliana] gi|145713258|gb|ABP96577.1| pointed first leaf [Arabidopsis thaliana] gi|145713260|gb|ABP96578.1| pointed first leaf [Arabidopsis thaliana] gi|145713262|gb|ABP96579.1| pointed first leaf [Arabidopsis thaliana] gi|145713264|gb|ABP96580.1| pointed first leaf [Arabidopsis thaliana] gi|145713266|gb|ABP96581.1| pointed first leaf [Arabidopsis thaliana] gi|145713268|gb|ABP96582.1| pointed first leaf [Arabidopsis thaliana] gi|145713270|gb|ABP96583.1| pointed first leaf [Arabidopsis thaliana] gi|145713272|gb|ABP96584.1| pointed first leaf [Arabidopsis thaliana] gi|145713274|gb|ABP96585.1| pointed first leaf [Arabidopsis thaliana] gi|145713276|gb|ABP96586.1| pointed first leaf [Arabidopsis thaliana] gi|145713278|gb|ABP96587.1| pointed first leaf [Arabidopsis thaliana] gi|145713280|gb|ABP96588.1| pointed first leaf [Arabidopsis thaliana] gi|145713282|gb|ABP96589.1| pointed first leaf [Arabidopsis thaliana] gi|145713284|gb|ABP96590.1| pointed first leaf [Arabidopsis thaliana] gi|297318298|gb|EFH48720.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp. lyrata] gi|297336375|gb|EFH66792.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp. lyrata] gi|297339642|gb|EFH70059.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp. lyrata] gi|332192166|gb|AEE30287.1| 40S ribosomal protein S18 [Arabidopsis thaliana] gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18 [Arabidopsis thaliana] Length = 152 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|322695969|gb|EFY87768.1| 40S ribosomal protein S18 [Metarhizium acridum CQMa 102] gi|322707043|gb|EFY98622.1| 40S ribosomal protein S18 [Metarhizium anisopliae ARSEF 23] Length = 156 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum Iowa II] gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502] gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum Iowa II] gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis] Length = 153 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI N+ ++++ AL I GIG + S +C K + +R QL + E+ +I + Sbjct: 15 RIMNTNVDGRQKIMYALTAIKGIGRRFSNIVCKKADVNLSKRAGQLSQEEINRIVAIVAN 74 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q +L ++ +++RL + +RGLRH G+ VRG Sbjct: 75 PLQFNIPSYMLNRQKDVKDGKYKHITSNNLEASLREDLERLKKIRSHRGLRHHWGVRVRG 134 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 135 QHTKTTGR 142 >gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40] gi|238507888|ref|XP_002385145.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357] gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae] gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357] Length = 155 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++++ AL I G+G + S +C K + +R +L E V+ I Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERVVTIL 73 Query: 58 QAIEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D QV +L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi] gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi] Length = 156 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRVLNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++R+ + +RGLRH GL V Sbjct: 74 SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|257388629|ref|YP_003178402.1| 30S ribosomal protein S13P [Halomicrobium mukohataei DSM 12286] gi|257170936|gb|ACV48695.1| ribosomal protein S13 [Halomicrobium mukohataei DSM 12286] Length = 178 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ I K + + L + ++ + + + Sbjct: 20 FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79 Query: 61 E--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E D+ ++ DL+ ++ R+ + Y+G+RH+RG VR Sbjct: 80 EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 140 GQRTKSTGRTEGTIG 154 >gi|315425850|dbj|BAJ47503.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum subterraneum] gi|315427708|dbj|BAJ49304.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum subterraneum] Length = 161 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ-- 58 + R+ ++ R+ AL + GIG I I P R+ L E ++ +I Q Sbjct: 8 IVRVLNTDVDGTLRLPYALARVKGIGVNLGYAIARAAGIDPATRLGNLTEKQIEKIEQIA 67 Query: 59 -------------------AIEQDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +D + G DL + +I+ +M ++G+RH GL V Sbjct: 68 RNPTRFGIPAWLLNRRFDPVTGEDRHLTGADLELAIKEDIQTMMRTKSWKGIRHSLGLKV 127 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 128 RGQRTRTTGR 137 >gi|164660596|ref|XP_001731421.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966] gi|159105321|gb|EDP44207.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966] Length = 189 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%) Query: 35 NKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 N +PP +R ++ + +R + +E DLRR V NI +G Y G RH Sbjct: 89 NPAELPPSQRP----KASMDPLRSIV-----LESDLRREVLANIAHHRSIGSYVGKRHAG 139 Query: 95 GLPVRGQRTHTNARTRKKFGK 115 G PVRGQRT NA T ++ + Sbjct: 140 GFPVRGQRTQRNALTARRLNR 160 >gi|242043060|ref|XP_002459401.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor] gi|241922778|gb|EER95922.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor] Length = 152 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 14 RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELSSDELERLMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|45190917|ref|NP_985171.1| AER315Cp [Ashbya gossypii ATCC 10895] gi|44983985|gb|AAS52995.1| AER315Cp [Ashbya gossypii ATCC 10895] Length = 146 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + + IC K + +R +L + E+ ++ Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIM 73 Query: 61 E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|169598492|ref|XP_001792669.1| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15] gi|160704404|gb|EAT90262.2| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15] Length = 155 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ +I I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLGKRAGDLTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G +T+A +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ + T R Sbjct: 134 RGQHSKTTGR 143 >gi|226493800|ref|NP_001141254.1| hypothetical protein LOC100273341 [Zea mays] gi|194703562|gb|ACF85865.1| unknown [Zea mays] gi|195618614|gb|ACG31137.1| 40S ribosomal protein S18 [Zea mays] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 14 RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|255628659|gb|ACU14674.1| unknown [Glycine max] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + S C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFSNICCKKADVDMNKRAGELSAAELDSVMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQLKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|255566712|ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis] gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18, putative [Ricinus communis] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|224082650|ref|XP_002306780.1| predicted protein [Populus trichocarpa] gi|118481499|gb|ABK92692.1| unknown [Populus trichocarpa] gi|222856229|gb|EEE93776.1| predicted protein [Populus trichocarpa] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|294872965|ref|XP_002766467.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294881108|ref|XP_002769248.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294951469|ref|XP_002786996.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294956183|ref|XP_002788842.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239867347|gb|EEQ99184.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239872526|gb|EER01966.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239901586|gb|EER18792.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239904454|gb|EER20638.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] Length = 149 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +V AL I GIG + + IC K + +R +L + E+ +I Q I Sbjct: 13 IQRICNTNVDGRVKVAYALTAIKGIGRRFATLICKKCEVDTNKRAGELTQEEIQKIVQVI 72 Query: 61 EQDYQ--------------VEGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 Q V+G + + +++R+ + +RGLRH G+ V Sbjct: 73 SNPQQFRIPQWFLNRQHDPVDGTYSQKYSNLLDASKREDLERMKKMRLHRGLRHYWGIRV 132 Query: 99 RGQRTHTNAR 108 RGQ T T+ R Sbjct: 133 RGQHTKTSGR 142 >gi|224066487|ref|XP_002302108.1| predicted protein [Populus trichocarpa] gi|118481417|gb|ABK92651.1| unknown [Populus trichocarpa] gi|222843834|gb|EEE81381.1| predicted protein [Populus trichocarpa] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|219852960|ref|YP_002467392.1| 30S ribosomal protein S13P [Methanosphaerula palustris E1-9c] gi|219547219|gb|ACL17669.1| ribosomal protein S13 [Methanosphaerula palustris E1-9c] Length = 151 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R++ ++ K V AL I G+G +S I + A+ + +L + +V +IR + Sbjct: 11 FVRVSNTDLDGTKSVRVALTGIPGVGRHTSGIITRRAAVNEHELLGRLPDGDVDRIRDVV 70 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + DL T ++ L + CYRG+RH G VR Sbjct: 71 TDYGALIPAWMRNRIKDVYTGESKHILGSDLAMTNDEDVNLLRKIRCYRGIRHETGQKVR 130 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 131 GQRTKSTGRTGTTVG 145 >gi|226504536|ref|NP_001151612.1| 40S ribosomal protein S18 [Zea mays] gi|242032711|ref|XP_002463750.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor] gi|194708790|gb|ACF88479.1| unknown [Zea mays] gi|195605976|gb|ACG24818.1| 40S ribosomal protein S18 [Zea mays] gi|195618188|gb|ACG30924.1| 40S ribosomal protein S18 [Zea mays] gi|195620216|gb|ACG31938.1| 40S ribosomal protein S18 [Zea mays] gi|195648096|gb|ACG43516.1| 40S ribosomal protein S18 [Zea mays] gi|238008500|gb|ACR35285.1| unknown [Zea mays] gi|241917604|gb|EER90748.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor] Length = 152 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 14 RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELERLMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|19074361|ref|NP_585867.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1] gi|51702028|sp|Q8SRP2|RS18_ENCCU RecName: Full=40S ribosomal protein S18 gi|19069003|emb|CAD25471.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1] Length = 153 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA- 59 + RI NI KR+ AL I GIG + + IC +L I +R ++ E E+ +I A Sbjct: 13 IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72 Query: 60 -------IEQDYQ------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR--------GLPV 98 I + Y ++G + + + + RG +++R GL V Sbjct: 73 LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 133 RGQRTKSNGRRGRSM---GVSRKK 153 >gi|25553581|dbj|BAC24846.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|50509331|dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|125599284|gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group] Length = 148 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + S C K I +R +L E+ ++ + Sbjct: 8 ILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 67 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 68 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 128 RGQHTKTTGRRGKTV---GVSKKR 148 >gi|307352909|ref|YP_003893960.1| 30S ribosomal protein S13P [Methanoplanus petrolearius DSM 11571] gi|307156142|gb|ADN35522.1| ribosomal protein S13P [Methanoplanus petrolearius DSM 11571] Length = 148 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V AL + GIG +S I + P + L E V +IR+ + Sbjct: 9 FVRVENTDLDGTKSVQVALTGLAGIGMHTSVSIAQMAGVDPRATLGLLEEDVVDRIREVV 68 Query: 61 --------------EQD-YQVEG------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++D Y E DLR V ++ R+ + CYRG+RH VR Sbjct: 69 SGYTEKVPAWMLNRQKDVYTGEAKQLLGTDLRMAVDDDVNRMRKIRCYRGIRHETHQKVR 128 Query: 100 GQRTHTNAR 108 GQRT + R Sbjct: 129 GQRTKSTGR 137 >gi|282164925|ref|YP_003357310.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE] gi|282157239|dbj|BAI62327.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE] Length = 225 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ +V+ AL I GIG + S+ + K + P + L +V ++R A+ Sbjct: 71 LVRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNAL 130 Query: 61 EQ---------------DYQVEG------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E Y E DL + +I + + Y+G+RH RG VR Sbjct: 131 ENIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVR 190 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 191 GQRTRSTGRTGATVG 205 >gi|310798436|gb|EFQ33329.1| ribosomal protein S13/S18 [Glomerella graminicola M1.001] Length = 156 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|256273632|gb|EEU08559.1| Rps18ap [Saccharomyces cerevisiae JAY291] Length = 147 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61 + N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 18 LLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNP 77 Query: 62 ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101 Q+ +G T+A N++ RL + +RG+RH GL VRGQ Sbjct: 78 THYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQ 137 Query: 102 RTHTNARTR 110 T T R R Sbjct: 138 HTKTTGRRR 146 >gi|302410605|ref|XP_003003136.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102] gi|261358160|gb|EEY20588.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102] Length = 156 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVHSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|260829983|ref|XP_002609941.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae] gi|41018059|sp|Q8ISP0|RS18_BRABE RecName: Full=40S ribosomal protein S18 gi|24266988|gb|AAN52390.1| ribosomal protein S18 [Branchiostoma belcheri] gi|229295303|gb|EEN65951.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae] Length = 152 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI ++++ AL I G+G + S +C K I +R +L + EV I I Sbjct: 12 ILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIM 71 Query: 58 QAIEQ----DYQVE---------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|269986619|gb|EEZ92901.1| ribosomal protein S13 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 179 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K+V L I GIGF S + L IP ++ L E ++ ++++A+ Sbjct: 26 IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85 Query: 61 EQ---------------------DYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 DY + +LR M I+++ Y+G RH + Sbjct: 86 SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145 Query: 99 RGQR 102 RGQ+ Sbjct: 146 RGQK 149 >gi|156086130|ref|XP_001610474.1| 40S ribosomal protein S18 [Babesia bovis T2Bo] gi|154797727|gb|EDO06906.1| 40S ribosomal protein S18, putative [Babesia bovis] Length = 154 Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 22/134 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 RI N+ ++V AL I GIG + + +C I +R +L E+ ++ I Sbjct: 16 RILNTNVDGRQKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTTDEINKVVTIISS 75 Query: 61 -------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ +L T M +++R+ + +RGLRH GL RG Sbjct: 76 PADVMIPAWFLNRQKDYKEGKNLHNTANMLDTCLRDDLERMKKMRLHRGLRHYWGLRTRG 135 Query: 101 QRTHTNARTRKKFG 114 Q T + R K G Sbjct: 136 QHTKSTGRHGKTVG 149 >gi|322369537|ref|ZP_08044102.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253] gi|320551269|gb|EFW92918.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253] Length = 168 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ + + + + +L + ++ ++ +A+ Sbjct: 16 FVRIGQTDLDGTKTVERSLSEMNGIGRRTARIVAEEADVDRKATFGRLDDDDIERVVEAV 75 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++ DL + ++ R+ + Y+G+RH+RG VR Sbjct: 76 ENYADEVPAWLTNHRKEYFSGETTHETGNDLSMSRRRDLNRMQMIDSYKGVRHKRGQKVR 135 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 136 GQRTKSTGRTEGTIG 150 >gi|302915869|ref|XP_003051745.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732684|gb|EEU46032.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 131 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 1 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 60 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G +A +++RL + +RGLRH GL V Sbjct: 61 QNPTQYKIPTWFLNRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 120 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 121 RGQHTKTTGR 130 >gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255] Length = 155 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ N+ ++++ AL I G+G + S +C K + +R +L E ++ I Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTIL 73 Query: 58 QAIEQ------------------DYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D QV + L + +++RL + +RGLRH GL V Sbjct: 74 QTPTQYKIPSWFLNRQRDITDGKDTQVVSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|10802919|gb|AAG23667.1|AF288091_12 ribosomal protein S13 [Thraustochytrium aureum] Length = 120 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%) Query: 45 VHQLVESEVIQIRQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + ES++ + IE+++ + + + + K+++ R LR ++GLPVRG Sbjct: 44 ISLFSESQLEHLSIWIEKNFTGSNCIHTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRG 103 Query: 101 QRTHTNARTRKKFGKGG 117 QRT TNA+T K+ KG Sbjct: 104 QRTKTNAKTAKRLNKGS 120 >gi|50303317|ref|XP_451600.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640732|emb|CAH01993.1| KLLA0B01562p [Kluyveromyces lactis] Length = 146 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ VV AL I G+G + + +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNINVVYALTTIRGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRSHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|11466207|ref|NP_066530.1| ribosomal protein S13 [Naegleria gruberi] gi|10444242|gb|AAG17808.1|AF288092_33 ribosomal protein S13 [Naegleria gruberi] Length = 163 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 11/99 (11%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEV------IQIRQAIEQDY-----QVEGDLRR 72 GIG ++ +C + P R+H +++ I + I+ + ++ L + Sbjct: 38 GIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLHK 97 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + I L + C +G RH LPVRGQR TNARTRK Sbjct: 98 EMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136 >gi|294658981|ref|XP_461313.2| DEHA2F22308p [Debaryomyces hansenii CBS767] gi|202953527|emb|CAG89714.2| DEHA2F22308p [Debaryomyces hansenii] Length = 165 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61 + NI +++ AL I G+G + S +C K + ++R +L + E+ +I ++ Sbjct: 37 LLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNP 96 Query: 62 ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101 Q QV+G +A N++ RL + +RG+RH GL VRGQ Sbjct: 97 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQ 156 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 157 HTKTTSRGR 165 >gi|261403748|ref|YP_003247972.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7] gi|261370741|gb|ACX73490.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7] Length = 154 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48 + R++ +I K+++ AL I+G+G ++ I + P++ L Sbjct: 13 LVRVSRTDIDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTEEEIKKIEEVL 72 Query: 49 -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + S + R+ E + +E DL +I RL + CYRG+RH GLP Sbjct: 73 IDPAKFGIPSWMFNRRKDYITGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 132 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 133 RGQRTKSTFR 142 >gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas] Length = 152 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++++ A+ I GIG + + +C K + +R +L E E+ +I + Sbjct: 12 ILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKFSQVMSNTLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152 >gi|292656901|ref|YP_003536798.1| 30S ribosomal protein S13 [Haloferax volcanii DS2] gi|291370341|gb|ADE02568.1| ribosomal protein S13 [Haloferax volcanii DS2] Length = 167 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 21/133 (15%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI ++ K V R+L + GIG ++++ I + + +L E E+ + +E Sbjct: 22 RIGQTDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDAVVDVVEN 81 Query: 63 ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 D+ DL +I R+ + Y+G+RH+RG VRGQ Sbjct: 82 FEDHAPEWMANRRKDFFSGDTDHITGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141 Query: 102 RTHTNARTRKKFG 114 RT + RT G Sbjct: 142 RTKSTGRTEGTIG 154 >gi|290559361|gb|EFD92694.1| ribosomal protein S13 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 179 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 22/127 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K V L I GI F S + L IP +++ L E E+ +++A+ Sbjct: 27 IVRIADTDLDGSKAVKDLLRSIPGISFSYSNALMKVLNIPKGKKLQDLDEKELNTLKEAL 86 Query: 61 EQ---------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 DY + DLR M I+++ YRG RH + Sbjct: 87 SDPFKYKIPHWLFNWRRDDETGLDYHLLSNDLRSKTTMRIQKIKTSRSYRGYRHSFNYKL 146 Query: 99 RGQRTHT 105 RGQ+ + Sbjct: 147 RGQKVKS 153 >gi|254582072|ref|XP_002497021.1| ZYRO0D13574p [Zygosaccharomyces rouxii] gi|238939913|emb|CAR28088.1| ZYRO0D13574p [Zygosaccharomyces rouxii] Length = 146 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 30/136 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +VV AL I G+G + + +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLSKRAGELTQEELERIVQIM 73 Query: 61 EQDYQ--------------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 + Q VE LR +++RL + +RG+RH Sbjct: 74 QNPTQYKIPTWFLSRQKDVNDGKDHHMLANGVESKLRD----DLERLKKIRAHRGIRHFW 129 Query: 95 GLPVRGQRTHTNARTR 110 GL VRGQ T T R R Sbjct: 130 GLRVRGQHTKTTGRKR 145 >gi|198425572|ref|XP_002131089.1| PREDICTED: similar to putative ribosomal protein S18 [Ciona intestinalis] Length = 152 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI + + AL I GIG + S +C K + +R +L + E+ +I + Sbjct: 12 ILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +I+RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|170092941|ref|XP_001877692.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647551|gb|EDR11795.1| predicted protein [Laccaria bicolor S238N-H82] Length = 156 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTII 74 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + ++ +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKNSQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|112799401|gb|ABI23025.1| SSU ribosomal protein S13AB [Candidatus Micrarchaeum acidiphilum ARMAN-2] gi|255513949|gb|EET90214.1| ribosomal protein S13 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 177 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 26/140 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----NKLAIPPERRVHQLVESEVIQI 56 + RIA +I + RAL + GIG S + +K I P + L ES+V Q+ Sbjct: 19 IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78 Query: 57 RQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 + I+ ++ + DL V +I R + L +RG RH+ Sbjct: 79 EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138 Query: 95 GLPVRGQRTHTNARTRKKFG 114 G VRGQ T + RT G Sbjct: 139 GQKVRGQHTRSTGRTGATVG 158 >gi|313229085|emb|CBY18237.1| unnamed protein product [Oikopleura dioica] Length = 152 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV-------IQ 55 R+ NI + + A+ I GIG + + IC K I +R QL E E+ + Sbjct: 14 RVQNTNIDGQRNITFAMTAIKGIGRRFANIICKKADINISQRAGQLDEEEIKRMETIMLN 73 Query: 56 IRQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100 RQ DY + +G + ++ +++R+ + C+RGLRH L VRG Sbjct: 74 PRQYKVPDYFLNRQKDAKDGTFTQVISNGLETKLREDLERMKKIRCHRGLRHYWMLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704] gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704] Length = 157 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 16 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 75 Query: 61 EQDYQ--------------VEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98 + Q +G + +A N ++RL + +RGLRH GL V Sbjct: 76 QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 135 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 136 RGQHTKTTGR 145 >gi|255559398|ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis] gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18, putative [Ricinus communis] Length = 152 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|154316255|ref|XP_001557449.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gi|156037576|ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gi|150846499|gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gi|154697910|gb|EDN97648.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70] Length = 156 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVEGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQVLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ + T R Sbjct: 134 RGQHSKTTGR 143 >gi|247421835|gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas] Length = 152 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS] gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735 delta SOWgp] gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira] Length = 155 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITTEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98 + Q +G + +A N ++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|115455881|ref|NP_001051541.1| Os03g0794700 [Oryza sativa Japonica Group] gi|297606796|ref|NP_001059007.2| Os07g0173700 [Oryza sativa Japonica Group] gi|25553579|dbj|BAC24844.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|28269440|gb|AAO37983.1| putative ribosomal protein S18A [Oryza sativa Japonica Group] gi|50400039|gb|AAT76427.1| putative ribosomal protein S18A [Oryza sativa Japonica Group] gi|50509329|dbj|BAD30787.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|108711530|gb|ABF99325.1| 40S ribosomal protein S18, putative, expressed [Oryza sativa Japonica Group] gi|113550012|dbj|BAF13455.1| Os03g0794700 [Oryza sativa Japonica Group] gi|125557400|gb|EAZ02936.1| hypothetical protein OsI_25076 [Oryza sativa Indica Group] gi|215765128|dbj|BAG86825.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765330|dbj|BAG87027.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636521|gb|EEE66653.1| hypothetical protein OsJ_23275 [Oryza sativa Japonica Group] gi|255677547|dbj|BAF20921.2| Os07g0173700 [Oryza sativa Japonica Group] Length = 152 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I G+G + S C K I +R +L E+ ++ + Sbjct: 14 RLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|241957179|ref|XP_002421309.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36] gi|223644653|emb|CAX40643.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36] gi|238883265|gb|EEQ46903.1| 40S ribosomal protein S18 [Candida albicans WO-1] Length = 145 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIM 73 Query: 61 E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98 + Q QV+G +A N++ RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181] gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181] Length = 155 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|299753190|ref|XP_001833116.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130] gi|298410185|gb|EAU88805.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130] Length = 185 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 31/51 (60%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++E +LRR + NI+ +G Y G RH LPVRGQ T +NA T KK + Sbjct: 131 KIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLNR 181 >gi|222480228|ref|YP_002566465.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239] gi|222453130|gb|ACM57395.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239] Length = 174 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 RI G ++ K V R+L + GIG ++++ + K + L E + V+ I Sbjct: 20 FVRIGGADLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDAVVDIA 79 Query: 58 QAIE----------QDYQVEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPVR 99 + +E Q+ G+ V + I R+ + Y+G+RH+RG VR Sbjct: 80 ENLEDHVPSWMTNRQNDFYSGETTHLVGTDVSEKRRHDINRMKIIESYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R+ G Sbjct: 140 GQRTKSTGRSEGTIG 154 >gi|121700288|ref|XP_001268409.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1] gi|119396551|gb|EAW06983.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1] Length = 155 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|255629171|gb|ACU14930.1| unknown [Glycine max] Length = 152 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I GIG + + C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|224032085|gb|ACN35118.1| unknown [Zea mays] Length = 129 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKITKDLSEEEVITLRKEVGK 105 Query: 63 DYQVEGDL 70 Y +EGDL Sbjct: 106 -YMIEGDL 112 >gi|118576779|ref|YP_876522.1| ribosomal protein S13 [Cenarchaeum symbiosum A] gi|158706221|sp|A0RY01|RS13_CENSY RecName: Full=30S ribosomal protein S13P gi|118195300|gb|ABK78218.1| ribosomal protein S13 [Cenarchaeum symbiosum A] Length = 227 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++P K+ V L I GIG+ + I + L I + L + +V I + + Sbjct: 54 IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + D+ TV +++R G ++G RH GL V Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173 Query: 99 RGQRTHTNAR 108 RGQRT R Sbjct: 174 RGQRTRNTGR 183 >gi|126179743|ref|YP_001047708.1| 30S ribosomal protein S13P [Methanoculleus marisnigri JR1] gi|158706247|sp|A3CWH6|RS13_METMJ RecName: Full=30S ribosomal protein S13P gi|125862537|gb|ABN57726.1| SSU ribosomal protein S13P [Methanoculleus marisnigri JR1] Length = 149 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V AL I GIG +S+ I A+ P + +L + V +I A+ Sbjct: 9 FVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAV 68 Query: 61 EQ------DYQVE-------GDLRRTVAMNIKRLMD--------LGCYRGLRHRRGLPVR 99 + D+ V G++R + ++ + D + YRG+RH G VR Sbjct: 69 DTYTEQVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVR 128 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 129 GQRTKSTGRTGTTVG 143 >gi|254569222|ref|XP_002491721.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|238031518|emb|CAY69441.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|328351775|emb|CCA38174.1| 40S ribosomal protein S18 [Pichia pastoris CBS 7435] Length = 153 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + S +C K + +R +L + E+ ++ + Sbjct: 17 ILRLLNTNVDGRIKIMYALTTIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIM 76 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G T+A +I+RL + +RG+RH GL V Sbjct: 77 QNPTQYKIPAWFLNRQRDTVDGKDYHTLANSLESKYRDDIERLKKIRAHRGIRHAWGLKV 136 Query: 99 RGQRTHTNAR 108 RGQ T T +R Sbjct: 137 RGQHTKTTSR 146 >gi|46125031|ref|XP_387069.1| hypothetical protein FG06893.1 [Gibberella zeae PH-1] Length = 179 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 37 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIL 96 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G +A +++RL + +RGLRH GL V Sbjct: 97 QNPTQYKIPTWFINRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 156 Query: 99 RGQRTHTNARTRKKFG----KGG 117 RGQ T T R + G KGG Sbjct: 157 RGQHTKTTGRRGRTVGVSKKKGG 179 >gi|39941500|ref|XP_360287.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15] gi|59802871|gb|AAX07649.1| 40S ribosomal protein S18-like protein [Magnaporthe grisea] gi|145022352|gb|EDK06372.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15] Length = 156 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++V AL I G+G + S + K + +R +L E+ ++ + Sbjct: 14 ILRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTIL 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G +T+A +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|225432662|ref|XP_002282412.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225437044|ref|XP_002278727.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225460586|ref|XP_002262702.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 152 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|294463827|gb|ADE77437.1| unknown [Picea sitchensis] Length = 152 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGIGRRFANLVCKKADVDMNKRAGELSAAELENLMTIVSN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PKQFKIPEWFLNRQKDYKDGRTNQLVSNALDMRLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1] gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1] gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR] gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88] Length = 155 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITSEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|126136941|ref|XP_001384994.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054] gi|126092216|gb|ABN66965.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054] Length = 145 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVDLTKRAGELTQEELERIVTIM 73 Query: 61 E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY V +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTNYKVPAWFLNRQKDHVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|313103638|pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|22204120|gb|AAM92708.1| putative ribosomal protein S18 [Triticum aestivum] Length = 152 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 27/143 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I G+G + S +C K I +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHN 73 Query: 61 -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99 ++DY+ +G + V+ +++RL + +RGLRH G+ VR Sbjct: 74 PRQFKVPDWFLNRKKDYK-DGRFSQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRVR 132 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQ T T R K GV++KR Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152 >gi|300708772|ref|XP_002996559.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01] gi|239605870|gb|EEQ82888.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01] Length = 161 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI N+ KRVV ALC I GIG + + IC + + RR L + E+ +I+ AI Sbjct: 23 RIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAIND 82 Query: 63 -----------DYQ---VEGDLRRTVA--MNIKRLMDLGCYRGLRHRR------GLPVRG 100 +Y+ V+G V+ M+ + M L + +RH R GL V G Sbjct: 83 PSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKVHG 142 Query: 101 QRTHTNAR 108 QR+ +N R Sbjct: 143 QRSKSNGR 150 >gi|150402489|ref|YP_001329783.1| 30S ribosomal protein S13P [Methanococcus maripaludis C7] gi|159905737|ref|YP_001549399.1| 30S ribosomal protein S13P [Methanococcus maripaludis C6] gi|150033519|gb|ABR65632.1| ribosomal protein S13 [Methanococcus maripaludis C7] gi|159887230|gb|ABX02167.1| ribosomal protein S13 [Methanococcus maripaludis C6] Length = 149 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CYRG+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYRGVRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKG---GVARKR 122 Q RTR F KG GV RK+ Sbjct: 131 Q------RTRGSFRKGTSMGVKRKK 149 >gi|154151764|ref|YP_001405382.1| 30S ribosomal protein S13P [Candidatus Methanoregula boonei 6A8] gi|154000316|gb|ABS56739.1| ribosomal protein S13 [Methanoregula boonei 6A8] Length = 153 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 21/133 (15%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI ++ K V AL I GIG +S I + ++ L E V +IR A+E+ Sbjct: 12 RIGTTDLDGTKSVRVALTGIKGIGRHTSTVISRMAKVDEYAKLGLLDEESVNRIRAAVEK 71 Query: 63 ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + + GD+ +I + + CY+G+RH G VRGQ Sbjct: 72 YATSIPMWMANRPKDLYTGENKHLIGGDVALARDEDINMMRKIRCYKGIRHETGQKVRGQ 131 Query: 102 RTHTNARTRKKFG 114 RT + RT G Sbjct: 132 RTKSTGRTGTTVG 144 >gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081] gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081] gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3] gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188] Length = 155 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITSEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|324525495|gb|ADY48555.1| 40S ribosomal protein S18 [Ascaris suum] Length = 154 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I +R +L E ++ ++ Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINKRAGELTEEDMEKLTQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PKQYKIPNWFLNRQKDIKDGKYTQCLSTALDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01] gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01] gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18] Length = 155 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|118372788|ref|XP_001019588.1| ribosomal protein S13p/S18e containing protein [Tetrahymena thermophila] gi|319443368|pdb|2XZM|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443403|pdb|2XZN|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|89301355|gb|EAR99343.1| ribosomal protein S13p/S18e containing protein [Tetrahymena thermophila SB210] gi|315570327|tpg|DAA33982.1| TPA_exp: 40S ribosomal protein rpS18e [Tetrahymena thermophila] Length = 155 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 RI NI + AL I GIG + + IC L I P R L E + +I I Sbjct: 16 RILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75 Query: 62 --------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++YQ+ + L + +++RL + +RGLRH GL VRG Sbjct: 76 PEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRG 135 Query: 101 QRTHTNAR 108 Q T T+ R Sbjct: 136 QHTKTSGR 143 >gi|311334520|emb|CBN08641.1| 40S ribosomal protein S18 [Microcosmus squamiger] Length = 152 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 30/134 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + RI+ NI ++++ A+ + G+G + S IC K + +R +L + E V+ I Sbjct: 12 ILRISNTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIM 71 Query: 58 QAIEQ----DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 Q Q D+ Q++ LR + +R+ + +RGLRH Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKFSQVLSNQLDNKLRE----DTERMKKIRAHRGLRHYW 127 Query: 95 GLPVRGQRTHTNAR 108 GL VRGQ T T R Sbjct: 128 GLRVRGQHTKTTGR 141 >gi|303244311|ref|ZP_07330648.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1] gi|302485438|gb|EFL48365.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1] Length = 168 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 29/48 (60%) Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 E + +E DL TV +I + + CYRG+RH GLP RGQRT + R Sbjct: 110 EDKHLIETDLMLTVQEDITTMKKIRCYRGIRHELGLPCRGQRTRGSFR 157 >gi|189208913|ref|XP_001940789.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976882|gb|EDU43508.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 155 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ +I I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ + T R Sbjct: 134 RGQHSKTTGR 143 >gi|299751837|ref|XP_002911694.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130] gi|298409557|gb|EFI28200.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130] Length = 156 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTII 74 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++YQ+ + + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKNYQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|54039447|sp|Q962R1|RS18_SPOFR RecName: Full=40S ribosomal protein S18 gi|15213824|gb|AAK92187.1|AF400215_1 ribosomal protein S18 [Spodoptera frugiperda] gi|48958395|dbj|BAD23920.1| ribosomal protein S18 [Antheraea yamamai] gi|268306384|gb|ACY95313.1| ribosomal protein S18 [Manduca sexta] gi|315115383|gb|ADT80664.1| ribosomal protein S18 [Euphydryas aurinia] Length = 152 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI ++V+ A+ I G+G + S + K I ++R + E EV +I Sbjct: 12 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 RQ D+ V+G + + N+ +RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|299115551|emb|CBN75754.1| conserved unknown protein [Ectocarpus siliculosus] Length = 192 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V +L I G+G + + IC K + P +R ++ E+ ++ I Sbjct: 52 ILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAII 111 Query: 61 EQ-------DY----QVEGDLRRTVAM-----------NIKRLMDLGCYRGLRHRRGLPV 98 + D+ Q + +T + +++RL + +RG+RH G+ V Sbjct: 112 QNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRV 171 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ T T R K GG Sbjct: 172 RGQHTKTTGRRGKIVAAGG 190 >gi|115661694|ref|XP_001202116.1| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] gi|115689720|ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] Length = 152 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I G+G + + C K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + +L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|112984000|ref|NP_001037269.1| ribosomal protein S18 [Bombyx mori] gi|49532882|dbj|BAD26676.1| Ribosomal protein S18 [Plutella xylostella] gi|54609321|gb|AAV34876.1| ribosomal protein S18 [Bombyx mori] Length = 152 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI ++V+ A+ I G+G + S + K I ++R + E EV +I Sbjct: 12 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 RQ D+ V+G + + N+ +RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|242211468|ref|XP_002471572.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R] gi|220729344|gb|EED83220.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R] Length = 156 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ ++ I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTII 74 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + ++ +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQRDIVDGKNSQILSNSVDSKIRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|307165872|gb|EFN60227.1| 40S ribosomal protein S18 [Camponotus floridanus] Length = 152 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I Sbjct: 14 RVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 73 Query: 57 -RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V+G + + N+ +R+ + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|255629053|gb|ACU14871.1| unknown [Glycine max] Length = 152 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I GIG + + C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELSAAELDSVMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|255087650|ref|XP_002505748.1| ribosomal protein S18 [Micromonas sp. RCC299] gi|226521018|gb|ACO67006.1| ribosomal protein S18 [Micromonas sp. RCC299] Length = 145 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ N+ +V+ AL I GIG + S +C K I +R +L +E+ + Sbjct: 12 ILRVLNTNVDGRTKVMYALTQIRGIGRRFSNVVCKKAEIDMGKRAGELSAAELESLMVIV 71 Query: 57 --------------RQAIEQD----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ +D QV L ++ +++RL + +RGLRH G+ V Sbjct: 72 SNPRQFRIPDWFLNRQKNYKDGKYIQQVSNQLDTSLRDDLERLKKIRNHRGLRHYWGIRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|50344504|emb|CAH04338.1| S18e ribosomal protein [Timarcha balearica] Length = 152 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI G NI ++V+ AL I G+G + S + K + ++R + E EV +I Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYSNLVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 57 ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + I+ Y L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|156542046|ref|XP_001601390.1| PREDICTED: similar to S18e ribosomal protein [Nasonia vitripennis] Length = 165 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I Sbjct: 27 RVVGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 86 Query: 57 -RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V+G + + N+ +R+ + +RGLRH GL VRG Sbjct: 87 PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 146 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 147 QHTKTTGR 154 >gi|242772774|ref|XP_002478105.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500] gi|218721724|gb|EED21142.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500] Length = 163 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R + E+ +I I Sbjct: 22 IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 81 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + ++ +++RL + +RGLRH GL V Sbjct: 82 QNPTQYKIPSWFLNRQRDIVDGKDSQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 141 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 142 RGQHTKTTGR 151 >gi|11466475|ref|NP_038178.1| ribosomal protein S13 [Chrysodidymus synuroideus] gi|7110472|gb|AAF36944.1|AF222718_18 ribosomal protein S13 [Chrysodidymus synuroideus] Length = 112 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 23/33 (69%) Query: 81 LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + Y+ R+ G P+RGQRTHTNA+T+KKF Sbjct: 64 FYKIKNYKNFRNLLGYPIRGQRTHTNAKTKKKF 96 >gi|70909571|emb|CAJ17207.1| ribosomal protein S18e [Curculio glandium] Length = 152 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI G NI ++V+ AL I G+G + S + K + ++R + E EV +I Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 57 ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++ Y L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|297618742|ref|YP_003706847.1| ribosomal protein S13P [Methanococcus voltae A3] gi|297377719|gb|ADI35874.1| ribosomal protein S13P [Methanococcus voltae A3] Length = 149 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL I GIG ++ I + P+ + + + EV +I +E Sbjct: 11 RISKTDLKGESPLEYALQEIKGIGRAMARAIIRLTELDPKVQAGYIGDEEVAKIESVLED 70 Query: 63 ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + L CYRG+RH LP RG Sbjct: 71 PAKHGIPSWMFNRKKDVYSGLDKHLIETDLTMTVQEDITTMKKLRCYRGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFG 114 QRT + R G Sbjct: 131 QRTRGSFRKGSSMG 144 >gi|219128444|ref|XP_002184423.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404224|gb|EEC44172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 146 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ + VV L I GIG + S IC K + ++R +L E+ ++ I Sbjct: 14 ILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVI 73 Query: 61 EQDYQVE--------------GDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98 + Q + G + A N I+RL + +RGLRH + V Sbjct: 74 QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIRAHRGLRHWWNIRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T + R R Sbjct: 134 RGQHTCSTGRRR 145 >gi|296081217|emb|CBI18243.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 54 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 113 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 114 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 173 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 174 RGQHTKTTGRRGKTV---GVSKKR 194 >gi|325182081|emb|CCA16534.1| 40S ribosomal protein S18 putative [Albugo laibachii Nc14] Length = 152 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++ AL I GIG + + IC K + +R +L E+ ++ I Sbjct: 12 ILRILNTNIDGRRKCWIALTSIAGIGRRFAILICKKAEVDITKRAGELSNDEIERLVAII 71 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ V +L+ + +++RL + +RGLRH GL V Sbjct: 72 QNPLQFKIPVWFLNRKKDYKTGKHSQAVANNLQGKLREDLERLKKIHTHRGLRHCWGLKV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480] gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480] Length = 155 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDINDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|12232348|gb|AAG47944.1| ribosomal protein S18 [Cherax destructor] Length = 142 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++V+ A+ I G+G + S + K I +R ++ E EV +I Sbjct: 4 RLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSN 63 Query: 57 -RQAIEQDY--------------QV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ QV +L + +++R+ + +RGLRH GL VRG Sbjct: 64 PRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRVRG 123 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 124 QHTKTTGR 131 >gi|72095995|ref|XP_794924.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus purpuratus] gi|115959683|ref|XP_001190162.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus purpuratus] Length = 176 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++++ AL I G+G + + C K I +R +L + EV ++ ++ Sbjct: 38 RVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTILQN 97 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + +L + +++RL + +RGLRH GL VRG Sbjct: 98 PRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRVRG 157 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 158 QHTKTTGR 165 >gi|88799197|ref|ZP_01114777.1| 30S ribosomal protein S13 [Reinekea sp. MED297] gi|88778180|gb|EAR09375.1| 30S ribosomal protein S13 [Reinekea sp. MED297] Length = 35 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/27 (77%), Positives = 22/27 (81%) Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRK 111 G YRG+RHRR LPVRGQ T NARTRK Sbjct: 1 GLYRGIRHRRNLPVRGQNTKNNARTRK 27 >gi|116207686|ref|XP_001229652.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51] gi|88183733|gb|EAQ91201.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51] Length = 156 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + +R +L E+ ++ I Sbjct: 14 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERLVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D Q+ + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTAYKIPSWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|328899750|gb|AEB54647.1| ribosomal protein S18 [Procambarus clarkii] Length = 152 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++V+ A+ I G+G + S + K I +R ++ E EV +I Sbjct: 14 RLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSN 73 Query: 57 -RQAIEQDY--------------QV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ QV +L + +++R+ + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|71747446|ref|XP_822778.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927] gi|71747448|ref|XP_822779.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927] gi|70832446|gb|EAN77950.1| 40S ribosomal protein S18, putative [Trypanosoma brucei] gi|70832447|gb|EAN77951.1| 40S ribosomal protein S18, putative [Trypanosoma brucei] gi|261332570|emb|CBH15565.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense DAL972] gi|261332571|emb|CBH15566.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense DAL972] Length = 153 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + GIG + + +C K + ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSPEELEKISEVI 72 Query: 61 EQDYQV---EGDLRR------------TVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 + E L R T +M +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPEWFLNRQRDPKTGKTEHLTSSMVDTRLREDLERLRKIRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 133 RGQHTCTSGRRGKTVG 148 >gi|322490674|emb|CBZ25936.1| putative 40S ribosomal protein S18 [Leishmania mexicana MHOM/GT/2001/U1103] gi|322490675|emb|CBZ25937.1| putative 40S ribosomal protein S18 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 153 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVAFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 133 RGQHTCTSGRHGKTVG 148 >gi|255731334|ref|XP_002550591.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404] gi|240131600|gb|EER31159.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404] Length = 133 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61 + NI +++ AL I G+G + + +C K + +R +L + E+ +I ++ Sbjct: 5 LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 64 Query: 62 ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101 Q QV+G +A N++ RL + +RG+RH GL VRGQ Sbjct: 65 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 124 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 125 HTKTTSRGR 133 >gi|217075242|gb|ACJ85981.1| unknown [Medicago truncatula] Length = 152 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ +++ A+ I GIG + + C K + +R +L +E+ I + Sbjct: 14 RVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|68471071|ref|XP_720312.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314] gi|77022566|ref|XP_888727.1| hypothetical protein CaO19_7018 [Candida albicans SC5314] gi|46442174|gb|EAL01465.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314] gi|76573540|dbj|BAE44624.1| hypothetical protein [Candida albicans] Length = 135 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61 + NI +++ AL I G+G + + +C K + +R +L + E+ +I ++ Sbjct: 7 LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 66 Query: 62 ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101 Q QV+G +A N++ RL + +RG+RH GL VRGQ Sbjct: 67 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 126 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 127 HTKTTSRGR 135 >gi|330932805|ref|XP_003303916.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1] gi|311319761|gb|EFQ87978.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1] Length = 155 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ ++ I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ + T R Sbjct: 134 RGQHSKTTGR 143 >gi|164429137|ref|XP_956794.2| 40S ribosomal protein S18 [Neurospora crassa OR74A] gi|157072424|gb|EAA27558.2| 40S ribosomal protein S18 [Neurospora crassa OR74A] gi|289618437|emb|CBI55161.1| unnamed protein product [Sordaria macrospora] Length = 156 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIM 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D Q+ + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|45358882|ref|NP_988439.1| 30S ribosomal protein S13P [Methanococcus maripaludis S2] gi|74553909|sp|Q6LXN1|RS13_METMP RecName: Full=30S ribosomal protein S13P gi|45047748|emb|CAF30875.1| SSU ribosomal protein S13 [Methanococcus maripaludis S2] Length = 149 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CY+G+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKG---GVARKR 122 Q RTR F KG GV RK+ Sbjct: 131 Q------RTRGSFRKGTSMGVKRKK 149 >gi|70909575|emb|CAJ17208.1| ribosomal protein S18e [Sphaerius sp. APV-2005] Length = 152 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI ++V+ AL I GIG + S + K + ++R + E EV +I Sbjct: 12 ILRIMNTNIEGNRKVMFALTAIKGIGRRYSNIVLKKADVDLDKRAGECSEEEVEKIVTIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 RQ D+ V+G + + N+ +R+ + +RG+RH GL V Sbjct: 72 QVPRQFKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|296411741|ref|XP_002835588.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629374|emb|CAZ79745.1| unnamed protein product [Tuber melanosporum] Length = 216 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 75 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTII 134 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 135 QNPTQYKIPTWFLNRQRDIIDGKDSQILANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 194 Query: 99 RGQRTHTNAR 108 RGQ + T R Sbjct: 195 RGQHSKTTGR 204 >gi|76573321|gb|ABA46765.1| unknown [Solanum tuberosum] Length = 152 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 27/143 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I GIG + + C K I +R +L +E+ + + Sbjct: 14 RVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMSKRAGELTAAELDSLMVVVAN 73 Query: 61 -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99 ++DY+ +G + + +++RL + +RGLRH GL VR Sbjct: 74 PRQFKIPDWFLNRQKDYK-DGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQ T T R K GV++KR Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152 >gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371] gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517] gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892] gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371] gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517] gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892] gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818] Length = 155 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|281211011|gb|EFA85177.1| 40S ribosomal protein S18 [Polysphondylium pallidum PN500] Length = 154 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++++ AL + GIG + + +C K + ++R +L + EV ++ + Sbjct: 12 IIRIYNTNVDGRRKIMYALTNVKGIGRRFANLVCKKADVDLQKRAGELSKDEVERLTTIL 71 Query: 61 EQDYQV--------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 Q +G + +A +++RL + +RG+RH GL V Sbjct: 72 NHPRQYNIPAWFLNRQKDIKDGKYSQALANQLDVKYREDLERLKKIRAHRGIRHHMGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ+T T R Sbjct: 132 RGQKTKTTGR 141 >gi|15668361|ref|NP_247157.1| 30S ribosomal protein S13P [Methanocaldococcus jannaschii DSM 2661] gi|3334492|sp|P54019|RS13_METJA RecName: Full=30S ribosomal protein S13P gi|2826258|gb|AAB98169.1| SSU ribosomal protein S13P (rpsM) [Methanocaldococcus jannaschii DSM 2661] Length = 150 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48 + R++ ++ K+++ AL I+G+G ++ I + P + L Sbjct: 9 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 68 Query: 49 -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + S + R+ E + +E DL +I RL + CYRG+RH GLP Sbjct: 69 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 128 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 129 RGQRTKSTFR 138 >gi|217071380|gb|ACJ84050.1| unknown [Medicago truncatula] Length = 152 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + + C K + +R +L +E+ I + Sbjct: 12 ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTVAELENIMTVV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|223469633|gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas] Length = 152 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 14 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNPRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV++KR Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152 >gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893] gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893] Length = 155 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|260942527|ref|XP_002615562.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720] gi|238850852|gb|EEQ40316.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720] Length = 117 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 22/115 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIRQAIEQ------------ 62 AL I G+G + S +C K + +R +L + E V+ I Q Q Sbjct: 3 ALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPTQYKIPAWFLNRQK 62 Query: 63 ------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 DY V +L + +++RL + +RG+RH GL VRGQ T T +R R Sbjct: 63 DHVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQHTKTTSRGR 117 >gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H] gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H] Length = 156 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + RI N+ ++V AL I GIG + + IC + + +R +L E+ + I Sbjct: 14 ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73 Query: 58 QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 A Q D+ + EG +A +++R+ + +RGLRH GL V Sbjct: 74 NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|50344500|emb|CAH04336.1| S18e ribosomal protein [Cicindela campestris] Length = 152 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI G NI ++V+ A+ I G+G + + + K + ++R + E EV +I Sbjct: 12 ILRILGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 RQ D+ V+G + + N+ +R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|50344502|emb|CAH04337.1| S18e ribosomal protein [Dascillus cervinus] Length = 152 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI G NI ++V+ AL I G+G + + + K + ++R + E EV +I Sbjct: 12 ILRIMGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVA--MNIKRLMDLG------CYRGLRHRRGLPV 98 RQ D+ V+G + + ++ K DLG +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLGRMKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|312219643|emb|CBX99586.1| hypothetical protein [Leptosphaeria maculans] Length = 233 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ ++V+ AL I G+G + S +C K + +R L E+ ++ I+ Sbjct: 94 RLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTIIQN 153 Query: 63 DYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100 Q V+G + +A +++RL + +RGLRH GL VRG Sbjct: 154 PLQYKIPAWFLNRQRDIVDGKNSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRVRG 213 Query: 101 QRTHTNAR 108 Q + T R Sbjct: 214 QHSKTTGR 221 >gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax SaI-1] gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax] Length = 156 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59 RI N+ ++V AL I GIG + + IC + + +R +L E+ + I A Sbjct: 16 RILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIMNA 75 Query: 60 IEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100 Q D+ + EG +A +++R+ + +RGLRH GL VRG Sbjct: 76 PSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRVRG 135 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 136 QHTKTTGR 143 >gi|187119176|ref|NP_001119689.1| ribosomal protein S18 [Acyrthosiphon pisum] gi|89473736|gb|ABD72680.1| putative ribosomal protein S18 [Acyrthosiphon pisum] gi|239788236|dbj|BAH70806.1| ACYPI000081 [Acyrthosiphon pisum] gi|326493984|dbj|BAJ85454.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326522712|dbj|BAJ88402.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 152 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ A+ I GIG + S + K + +R + + EV +I + Sbjct: 12 ILRILSTNIDGKRKVMFAMTAIKGIGRRFSNIVLKKADVDLNKRAGECTDEEVEKIITIM 71 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVVDGKFSQLTSSTLDSKLREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|61252180|sp|P0A4B0|RS13_LACLC RecName: Full=30S ribosomal protein S13 gi|97982|pir||S17990 ribosomal protein S13 - Lactococcus lactis subsp. lactis (fragment) gi|44077|emb|CAA41943.1| ribosomal protein S13 [Lactococcus lactis] Length = 51 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 29/48 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL 48 MAR AGV+IP KR+V +L Y+ G+G ++S+ + + + R L Sbjct: 1 MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDL 48 >gi|2129263|pir||F64323 ribosomal protein S18 - Methanococcus jannaschii Length = 186 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48 + R++ ++ K+++ AL I+G+G ++ I + P + L Sbjct: 45 LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 104 Query: 49 -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + S + R+ E + +E DL +I RL + CYRG+RH GLP Sbjct: 105 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 164 Query: 99 RGQRTHTNAR 108 RGQRT + R Sbjct: 165 RGQRTKSTFR 174 >gi|62083469|gb|AAX62459.1| ribosomal protein S18 [Lysiphlebus testaceipes] Length = 155 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ NI +++ AL I G+G + + + K I ++R + E E+ +I I Sbjct: 15 MLRVMSTNIDGNRKITLALTDIKGVGRRYADMVVKKADIALQKRAGECTEEEIEKIVTII 74 Query: 61 EQ-------DY-------QVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 DY +V+G + +++RL + ++GLRH GL V Sbjct: 75 ANPRHYKIPDYYLNRQKDKVDGKYSQLTGSSVDSKLREDLERLKKIRAHKGLRHYWGLRV 134 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 135 RGQHTKTTGR 144 >gi|225678479|gb|EEH16763.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb03] Length = 201 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 60 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 119 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + + +++RL + +RGLRH GL V Sbjct: 120 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 179 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 180 RGQHTKTTGR 189 >gi|210075787|ref|XP_503080.2| YALI0D20614p [Yarrowia lipolytica] gi|199425832|emb|CAG81272.2| YALI0D20614p [Yarrowia lipolytica] Length = 152 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ A+C I G+G + + +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGELTVEELERIVTII 73 Query: 61 EQ--DYQVEG--------------------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Y++ G L + +I+RL + +RGLRH G V Sbjct: 74 QNPGQYKIPGWFLNRQRDFTDGKDSQLLVNQLDVKLRDDIERLKKIRAHRGLRHYWGYKV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTTR 143 >gi|307109786|gb|EFN58023.1| 40S ribosomal protein S18 [Chlorella variabilis] Length = 153 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ ++++ AL I GIG + S C K + +R +L E+ I + Sbjct: 15 RVLNTNVDGKQKIMYALTAIKGIGRRFSNICCKKAEVDLNKRAGELSAEELESIMTIVAN 74 Query: 63 -------DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 D+ QV L + +++RL + +RGLRH GL VRG Sbjct: 75 PRAYKIPDWFLNRQKDVKDGRYSQVTSSALDTKLRDDLERLKKIRNHRGLRHYWGLTVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GVA+K+ Sbjct: 135 QHTKTTGRRGKTV---GVAKKK 153 >gi|159475653|ref|XP_001695933.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii] gi|158275493|gb|EDP01270.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii] Length = 124 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 46/96 (47%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 AL + G+G +S + I + +V + +S + ++ IE ++ L+R V N Sbjct: 18 ALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYIEANFVTGDTLKRQVREN 77 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + + RG+RH GLPV +T +N +K Sbjct: 78 VLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKL 113 >gi|157124077|ref|XP_001660320.1| 40S ribosomal protein S18 [Aedes aegypti] gi|94468520|gb|ABF18109.1| ribosomal protein S18 [Aedes aegypti] gi|108874121|gb|EAT38346.1| 40S ribosomal protein S18 [Aedes aegypti] Length = 152 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + E EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSEEEVEKIVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|261884953|ref|ZP_06008992.1| hypothetical protein CfetvA_06945 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 29 Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 20/26 (76%), Positives = 22/26 (84%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLR 91 VEGDL +VAM+IK LMDLG YRGLR Sbjct: 2 VEGDLTESVAMDIKALMDLGSYRGLR 27 >gi|302789830|ref|XP_002976683.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii] gi|300155721|gb|EFJ22352.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii] Length = 152 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVAN 73 Query: 61 -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++DY+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++KR Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152 >gi|289191583|ref|YP_003457524.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22] gi|288938033|gb|ADC68788.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22] Length = 150 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 28/48 (58%) Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 E + +E DL +I RL + CYRG+RH GLP RGQRT + R Sbjct: 91 EDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQRTRSTFR 138 >gi|71666149|ref|XP_820037.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener] gi|71666187|ref|XP_820056.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener] gi|70885364|gb|EAN98186.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] gi|70885383|gb|EAN98205.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] Length = 153 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 72 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + T AM +++RL +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 133 RGQHTCTSGRHGKTVG 148 >gi|322827919|gb|EFZ31897.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] Length = 154 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 14 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 73 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + T AM +++RL +RG+RH GL V Sbjct: 74 ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 133 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 134 RGQHTCTSGRHGKTVG 149 >gi|330845753|ref|XP_003294736.1| 40S ribosomal protein S18 [Dictyostelium purpureum] gi|325074743|gb|EGC28736.1| 40S ribosomal protein S18 [Dictyostelium purpureum] Length = 154 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V+ AL + G+G + + +C K + +R +L + EV ++ + Sbjct: 12 IIRIYNTNVDGRRKVMYALMCVKGVGKRFADLVCKKADVDTSKRAGELSKDEVERLTTIM 71 Query: 61 EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q +G + +A I +RL + +RG+RH GL V Sbjct: 72 NHPRQYNIPTWFLNRQKDIKDGKYSQCLANQIDVKFREDLERLKKIRAHRGIRHHFGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T T R + GVA+KR Sbjct: 132 RGQKTKTTGRRGRTV---GVAKKR 152 >gi|302023186|ref|ZP_07248397.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68] Length = 44 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 25/31 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQ 31 MARIAGV+IP KRVV +L Y++GIG +S+ Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSK 31 >gi|150399381|ref|YP_001323148.1| 30S ribosomal protein S13P [Methanococcus vannielii SB] gi|150012084|gb|ABR54536.1| ribosomal protein S13 [Methanococcus vannielii SB] Length = 149 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 31/145 (21%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEVKGIGRAMAKALIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL V +I + + CYRG+RH LP RG Sbjct: 71 PAKHGIPSWMFNRKKDVYTGLDKHLIETDLVLAVQEDIGNMKKIRCYRGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKG---GVARKR 122 Q RTR F KG GV RK+ Sbjct: 131 Q------RTRGSFRKGSTMGVKRKK 149 >gi|143450|gb|AAA22706.1| ribosomal protein S13 [Bacillus subtilis] Length = 36 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/25 (80%), Positives = 22/25 (88%) Query: 87 YRGLRHRRGLPVRGQRTHTNARTRK 111 YRG+RHRRGLPVRGQ + NARTRK Sbjct: 1 YRGIRHRRGLPVRGQNSKNNARTRK 25 >gi|320170357|gb|EFW47256.1| ribosomal protein S18 [Capsaspora owczarzaki ATCC 30864] Length = 152 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ AL I G+G + S +C K I ++R ++ E+EV ++ + Sbjct: 12 ILRMLNTNIDGKVKIPFALTKIKGVGRRYSNLVCKKADIDLKKRAGEVNEAEVERLLSIL 71 Query: 61 E--------------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + ++ +I+RL + +RGLRH G+ V Sbjct: 72 QNPRSYKIPDWFLNRQKDIVDGKTSQVLSNGLDNKLREDIERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ T T R + G G Sbjct: 132 RGQHTKTTGRHGRTVGVGA 150 >gi|154345580|ref|XP_001568727.1| 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|154345582|ref|XP_001568728.1| 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066069|emb|CAM43857.1| putative 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066070|emb|CAM43858.1| putative 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 153 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ ++ + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKTGIDVERRAGTLTAEELEKVAEVI 72 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 73 VDPARFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 133 RGQHTCTSGRHGKTVG 148 >gi|40287492|gb|AAR83860.1| putative ribosomal protein [Capsicum annuum] Length = 152 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 27/143 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ A+ I GIG + + C K I +R +L +E+ + + Sbjct: 14 RVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGELSAAELDSLMVVVAN 73 Query: 61 -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99 ++DY+ +G + + +++RL + +RGLRH GL VR Sbjct: 74 PRQFKIPDWFLNRQKDYK-DGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQ T T R K GV++KR Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152 >gi|124783098|gb|ABN14904.1| ribosomal protein S18 [Taenia asiatica] Length = 152 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 12 ILRVMNTNIDGQRKITYALTAIKGVGRRYATVVCKKADVDIRKRAGELTDDEIEKIVTVM 71 Query: 61 EQDYQV--------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 Q +G + +A +++RL + +RGLRH GL V Sbjct: 72 ANPRQYKIPNWFLNRQKDIEDGKHTQLLAQGLDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|157876642|ref|XP_001686666.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin] gi|68129741|emb|CAJ09047.1| putative 40S ribosomal protein S18 [Leishmania major strain Friedlin] Length = 153 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 133 RGQHTCTSGRHGKTVG 148 >gi|212531369|ref|XP_002145841.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] gi|210071205|gb|EEA25294.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] Length = 155 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R + E+ +I I Sbjct: 14 IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 73 Query: 61 E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +D QV + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPAWFLNRQRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|194753476|ref|XP_001959038.1| ribosomal protein S18 [Drosophila ananassae] gi|190620336|gb|EDV35860.1| ribosomal protein S18 [Drosophila ananassae] Length = 152 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q V+G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIVDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|41018060|sp|Q8IT98|RS18_AEQIR RecName: Full=40S ribosomal protein S18 gi|22758908|gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians] Length = 152 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++++ A+ I G+G + + +C K + +R +L E E+ ++ Sbjct: 14 RVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSN 73 Query: 57 ------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ +D + + L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GVA+K+ Sbjct: 134 QHTKTTGRRGRTV---GVAKKK 152 >gi|171686194|ref|XP_001908038.1| hypothetical protein [Podospora anserina S mat+] gi|170943058|emb|CAP68711.1| unnamed protein product [Podospora anserina S mat+] Length = 219 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + ++R +L E+ ++ I Sbjct: 77 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTII 136 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + V+G + +A +++RL + +RGLRH GL V Sbjct: 137 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 196 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 197 RGQHTKTTGR 206 >gi|159145688|gb|ABW90381.1| putative ribosomal protein S18 [Sipunculus nudus] Length = 152 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K + +R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGKRKIAFAMTAIKGVGRRYATIVCKKADVDVTKRAGELSDDEVEKLITVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPNWFLNRQKDVKDGKFSQVMSNQLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|221122256|ref|XP_002155929.1| PREDICTED: similar to ribosomal protein S18 isoform 1 [Hydra magnipapillata] gi|221122258|ref|XP_002155978.1| PREDICTED: similar to ribosomal protein S18 isoform 2 [Hydra magnipapillata] Length = 155 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + S K I ++R +L + EV I I Sbjct: 12 ILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIM 71 Query: 58 QAIEQ----DYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 Q Q DY + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDYFLNRQKDIKDGKYTQVLANALDNKLREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 132 RGQHTKTTGRKGRTVG 147 >gi|134045319|ref|YP_001096805.1| 30S ribosomal protein S13P [Methanococcus maripaludis C5] gi|132662944|gb|ABO34590.1| SSU ribosomal protein S13P [Methanococcus maripaludis C5] Length = 149 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 22/134 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CY+G+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGVRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFG 114 QRT + R G Sbjct: 131 QRTRGSFRKGTSMG 144 >gi|66548968|ref|XP_625104.1| PREDICTED: 40S ribosomal protein S18 [Apis mellifera] Length = 152 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I Sbjct: 14 RVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 73 Query: 57 -RQAIEQDYQ-------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V+G + + +++R+ + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|121544007|gb|ABM55667.1| putative ribosomal protein S18 [Maconellicoccus hirsutus] Length = 152 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI +++ AL I GIG + S + K + ++R + + EV +I Sbjct: 12 ILRIMNTNIDGKIKIMFALTAIKGIGRRFSNVVLKKADVDLDKRAGECSDEEVEKIITIM 71 Query: 57 ---RQAIEQDYQV---------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +L + +++RL + +RGLRH GL V Sbjct: 72 TNPRQFKIPDWFLNRQKDIVDGKYLQLASSNLDSKIREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|211938661|gb|ACJ13227.1| FI09342p [Drosophila melanogaster] Length = 170 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 30 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 89 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 90 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 149 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 150 RGQHTKTTGR 159 >gi|195380645|ref|XP_002049081.1| ribosomal protein S18 [Drosophila virilis] gi|194143878|gb|EDW60274.1| ribosomal protein S18 [Drosophila virilis] Length = 152 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|146103213|ref|XP_001469509.1| 40S ribosomal protein S18 [Leishmania infantum] gi|134073879|emb|CAM72618.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5] Length = 153 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R K G Sbjct: 133 RGQHTCTTGRHGKTVG 148 >gi|21392218|gb|AAM48463.1| RH43343p [Drosophila melanogaster] Length = 152 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|307195851|gb|EFN77647.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|307195853|gb|EFN77649.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|307195858|gb|EFN77654.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|332020747|gb|EGI61151.1| 40S ribosomal protein S18 [Acromyrmex echinatior] Length = 137 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 22/125 (17%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQ 58 G NI ++V+ A+ I G+G + + + K I ++R + E EV +I RQ Sbjct: 2 GTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQ 61 Query: 59 AIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRGQRT 103 D+ V+G + + N+ +R+ + +RGLRH GL VRGQ T Sbjct: 62 YKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRGQHT 121 Query: 104 HTNAR 108 T R Sbjct: 122 KTTGR 126 >gi|223994887|ref|XP_002287127.1| RS18, ribosomal protein 18 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335] gi|220976243|gb|EED94570.1| RS18, ribosomal protein 18 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335] Length = 146 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ + VV L I G+G + + IC K I +R +L E+ ++ I Sbjct: 14 ILRILNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAII 73 Query: 61 EQDYQVE--------------GDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98 + Q + G + A N I+R+ + +RGLRH G+ V Sbjct: 74 QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNFDAKLRDDIERMKKIRAHRGLRHWWGIRV 133 Query: 99 RGQRTHTNAR 108 RGQ T + R Sbjct: 134 RGQHTCSTGR 143 >gi|186522813|ref|NP_001119224.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis thaliana] gi|332004634|gb|AED92017.1| 30S ribosomal protein S13 [Arabidopsis thaliana] Length = 128 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60 AR+ GV IP KR+ +L YIHGIG ++ I L + E ++ + + E E+I +R + Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM--ENKITKDMAEEELIILRDEV 105 Query: 61 EQDYQVEGDL 70 + Y +EGDL Sbjct: 106 SK-YMIEGDL 114 >gi|17136882|ref|NP_476964.1| ribosomal protein S18, isoform A [Drosophila melanogaster] gi|24656100|ref|NP_725943.1| ribosomal protein S18, isoform B [Drosophila melanogaster] gi|194881531|ref|XP_001974884.1| ribosomal protein S18 [Drosophila erecta] gi|195336052|ref|XP_002034661.1| ribosomal protein S18 [Drosophila sechellia] gi|195486935|ref|XP_002091713.1| ribosomal protein S18 [Drosophila yakuba] gi|195585039|ref|XP_002082302.1| ribosomal protein S18 [Drosophila simulans] gi|730637|sp|P41094|RS18_DROME RecName: Full=40S ribosomal protein S18 gi|349256|gb|AAA28870.1| ribosomal protein S18 [Drosophila melanogaster] gi|7302403|gb|AAF57491.1| ribosomal protein S18, isoform A [Drosophila melanogaster] gi|21626903|gb|AAM68401.1| ribosomal protein S18, isoform B [Drosophila melanogaster] gi|38047723|gb|AAR09764.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba] gi|38048391|gb|AAR10098.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba] gi|56201301|dbj|BAD72904.1| RpS18 [Drosophila simulans] gi|56201321|dbj|BAD72922.1| RpS18 [Drosophila sechellia] gi|90855595|gb|ABE01159.1| IP16603p [Drosophila melanogaster] gi|190658071|gb|EDV55284.1| ribosomal protein S18 [Drosophila erecta] gi|194126631|gb|EDW48674.1| ribosomal protein S18 [Drosophila sechellia] gi|194177814|gb|EDW91425.1| ribosomal protein S18 [Drosophila yakuba] gi|194194311|gb|EDX07887.1| ribosomal protein S18 [Drosophila simulans] Length = 152 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|264667373|gb|ACY71272.1| ribosomal protein S18 [Chrysomela tremulae] Length = 152 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI G NI ++V+ AL I G+G + + + K + ++R + + EV +I Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSDEEVEKIITIM 71 Query: 57 ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + I+ Y L + +++R+ + +RG+RH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIIDGKYSQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|15897041|ref|NP_341646.1| 30S ribosomal protein S13P [Sulfolobus solfataricus P2] gi|284173385|ref|ZP_06387354.1| 30S ribosomal protein S13P [Sulfolobus solfataricus 98/2] gi|2500459|sp|P95986|RS13_SULSO RecName: Full=30S ribosomal protein S13P gi|1707820|emb|CAA69528.1| ribosomal protein S18 [Sulfolobus solfataricus P2] gi|13813206|gb|AAK40436.1| SSU ribosomal protein S13AB (rps13AB) [Sulfolobus solfataricus P2] gi|261601695|gb|ACX91298.1| ribosomal protein S13P [Sulfolobus solfataricus 98/2] Length = 165 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++ ++ AL + GIG+ +++ I KL + P R+ +L ++EV ++ I Sbjct: 8 VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVI 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R +RG+RH GL V Sbjct: 68 SDHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T RT GVARK+ Sbjct: 128 RGQRTRTTGRTGMTI---GVARKK 148 >gi|145357113|ref|XP_001422767.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gi|144583010|gb|ABP01084.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] Length = 144 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 22/133 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ +L I GIG + S +C K I +R +L +E+ + + Sbjct: 12 IIRVLNTNVDGREKVMYSLTKIKGIGRRFSNLVCKKAEIDLGKRAGELSAAELESLMVIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + D++ V L + +++RL + +RGLRH G+ V Sbjct: 72 SNPRQFRIPDWFLNRKHDFKDGKFSQLVSNQLDTKLRDDLERLKKMRNHRGLRHYWGIRV 131 Query: 99 RGQRTHTNARTRK 111 RGQ T T R R+ Sbjct: 132 RGQHTKTTGRGRR 144 >gi|268534940|ref|XP_002632603.1| C. briggsae CBR-RPS-18 protein [Caenorhabditis briggsae] gi|187022469|emb|CAP38284.1| CBR-RPS-18 protein [Caenorhabditis briggsae AF16] Length = 154 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K I +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVCCRKADIDVNKRAGELTEEDFDKIVTIMQN 73 Query: 63 DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100 Q + G L T N ++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|195124097|ref|XP_002006530.1| GI21106 [Drosophila mojavensis] gi|193911598|gb|EDW10465.1| GI21106 [Drosophila mojavensis] Length = 158 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 18 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 77 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 78 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 137 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 138 RGQHTKTTGR 147 >gi|301353227|ref|YP_003795224.1| ribosomal protein S13 [Proteromonas lacertae] gi|290573175|gb|ADD46362.1| ribosomal protein S13 [Proteromonas lacertae] Length = 129 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVI-----QIRQAIEQ 62 NI + L I+ I + ICNKL P +++ + + + I + +E+ Sbjct: 12 NIKLNINISELLTSIYSINLPKAIGICNKLGFNPNKQLKTIKDIDFILKILSNFLKLVEK 71 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR---GLPVRGQRTHTNARTRK 111 + +++ + I L +L + L++ R GLPV GQRTH+N + K Sbjct: 72 NDKIKSKKLHNIET-IAYLNNLKNTKNLKYYRLKNGLPVHGQRTHSNGQIAK 122 >gi|116783572|gb|ABK23001.1| unknown [Picea sitchensis] gi|116784761|gb|ABK23462.1| unknown [Picea sitchensis] gi|116785907|gb|ABK23903.1| unknown [Picea sitchensis] gi|116790495|gb|ABK25635.1| unknown [Picea sitchensis] gi|116792192|gb|ABK26268.1| unknown [Picea sitchensis] gi|116792691|gb|ABK26459.1| unknown [Picea sitchensis] gi|116793924|gb|ABK26933.1| unknown [Picea sitchensis] gi|148907687|gb|ABR16972.1| unknown [Picea sitchensis] gi|148908291|gb|ABR17259.1| unknown [Picea sitchensis] gi|224284844|gb|ACN40152.1| unknown [Picea sitchensis] Length = 152 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL--VESEVIQIRQ 58 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E E + I Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKRAGELTALELENLMIIV 71 Query: 59 AIEQDYQV-------EGDLR--RTVAM-----------NIKRLMDLGCYRGLRHRRGLPV 98 A + +++ + D++ RT + +++RL + +RGLRH GL V Sbjct: 72 ANPKQFKIPDWFLNRQKDIKDGRTTQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|56755399|gb|AAW25879.1| unknown [Schistosoma japonicum] Length = 157 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K I +R +L + EV ++ + Sbjct: 17 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 76 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RG+RH GL V Sbjct: 77 SNPSQSKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 136 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 137 RGQHTKTTGRRGRTV---GVSRKK 157 >gi|195431724|ref|XP_002063878.1| ribosomal protein S18 [Drosophila willistoni] gi|194159963|gb|EDW74864.1| ribosomal protein S18 [Drosophila willistoni] Length = 152 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 TNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|150401524|ref|YP_001325290.1| 30S ribosomal protein S13P [Methanococcus aeolicus Nankai-3] gi|150014227|gb|ABR56678.1| ribosomal protein S13 [Methanococcus aeolicus Nankai-3] Length = 149 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 26/43 (60%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 +E DL V +I + + CYRG+RH GLP RGQRT + R Sbjct: 96 IESDLTMAVQEDIATMKKIRCYRGIRHELGLPCRGQRTRGSFR 138 >gi|195057283|ref|XP_001995231.1| GH23036 [Drosophila grimshawi] gi|193899437|gb|EDV98303.1| GH23036 [Drosophila grimshawi] Length = 162 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 22 ILRIMSTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 81 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 82 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 141 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 142 RGQHTKTTGR 151 >gi|115390150|ref|XP_001212580.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624] gi|114194976|gb|EAU36676.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624] Length = 155 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ ++ + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERVVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPAWFLNRQRDITDGKDAHVLSNGVDQKAREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|296243122|ref|YP_003650609.1| 30S ribosomal protein S13P [Thermosphaera aggregans DSM 11486] gi|296095706|gb|ADG91657.1| SSU ribosomal protein S13P [Thermosphaera aggregans DSM 11486] Length = 162 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ +I + ++ L + G+G+ S I L + P R+ L + +V +I + Sbjct: 10 IIRVLETDIDGSLPLIYGLAEVKGLGYTFSLAITRILGLDPNTRIGYLSDEDVRKIEALV 69 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY V +L V +I+R + +RG+RH GL V Sbjct: 70 KNPSSYGLPSWMFNRRKDYASGKDLHLVGAELIYYVKEDIEREKRVRSWRGVRHALGLKV 129 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 130 RGQRTRTTGR 139 >gi|282931689|ref|ZP_06337181.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1] gi|281304187|gb|EFA96297.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1] Length = 33 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/26 (73%), Positives = 23/26 (88%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIG 26 MARIAGV++PR KR+V AL YI+GIG Sbjct: 4 MARIAGVDLPREKRIVVALTYIYGIG 29 >gi|157690762|tpe|CAL69108.1| TPA: putative 40S ribosomal protein S18 [Spadella cephaloptera] Length = 154 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++++ A+ I G G + S +C K + +R +L + EV ++ Sbjct: 12 ILRVMNTNIDGRRKIMFAMTSIKGCGRRFSNIVCKKADVDMTKRAGELSDEEVERVVTIM 71 Query: 57 --------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ +D + + L + +++RL + +RGLRH GL V Sbjct: 72 NNPRQYKIPDWFLNRQKDVKDGKYSQVLSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|125809258|ref|XP_001361051.1| GA21399 [Drosophila pseudoobscura pseudoobscura] gi|195154539|ref|XP_002018179.1| GL16906 [Drosophila persimilis] gi|54636224|gb|EAL25627.1| GA21399 [Drosophila pseudoobscura pseudoobscura] gi|194113975|gb|EDW36018.1| GL16906 [Drosophila persimilis] Length = 152 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 TNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|213028320|ref|ZP_03342767.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 62 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 33/60 (55%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 >gi|146103218|ref|XP_001469510.1| 40S ribosomal protein S18 [Leishmania infantum] gi|134073880|emb|CAM72619.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5] gi|322503453|emb|CBZ38538.1| unnamed protein product [Leishmania donovani BPK282A1] gi|322503454|emb|CBZ38539.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 166 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 26 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 85 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 86 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 145 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R K G Sbjct: 146 RGQHTCTTGRHGKTVG 161 >gi|56758184|gb|AAW27232.1| SJCHGC01887 protein [Schistosoma japonicum] gi|226472372|emb|CAX77222.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472374|emb|CAX77223.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472376|emb|CAX77224.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472378|emb|CAX77225.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472380|emb|CAX77226.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472382|emb|CAX77227.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472384|emb|CAX77228.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472386|emb|CAX77229.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472388|emb|CAX77230.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473486|emb|CAX71428.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473488|emb|CAX71429.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473490|emb|CAX71430.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473492|emb|CAX71431.1| ribosomal protein S18 [Schistosoma japonicum] Length = 152 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + +C K I +R +L + EV ++ Sbjct: 12 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 71 Query: 57 ---RQAIEQDY----QVEGD-----------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ Q + D L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152 >gi|170056800|ref|XP_001864194.1| 30S ribosomal protein S13P [Culex quinquefasciatus] gi|167876481|gb|EDS39864.1| 30S ribosomal protein S13P [Culex quinquefasciatus] Length = 152 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIVTII 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q ++G + + N+ +RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|17542018|ref|NP_502794.1| Ribosomal Protein, Small subunit family member (rps-18) [Caenorhabditis elegans] gi|3881192|emb|CAB16517.1| C. elegans protein Y57G11C.16, confirmed by transcript evidence [Caenorhabditis elegans] Length = 154 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K + +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQN 73 Query: 63 DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100 Q + G L T N ++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|15790213|ref|NP_280037.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1] gi|169235942|ref|YP_001689142.1| 30S ribosomal protein S13P [Halobacterium salinarum R1] gi|13124533|sp|Q9V2W4|RS13_HALSA RecName: Full=30S ribosomal protein S13P; AltName: Full=HS13 gi|6172227|dbj|BAA85895.1| ribosomal protein HS13 [Halobacterium salinarum] gi|10580671|gb|AAG19517.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1] gi|167727008|emb|CAP13794.1| ribosomal protein S13 [Halobacterium salinarum R1] Length = 171 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL + G+G + ++ + ++ + + L + + + A+ Sbjct: 16 FVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAV 75 Query: 61 E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + ++ + G D+ T +I R+ + Y+G+RH RG VR Sbjct: 76 DSFTEHAPAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVR 135 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 136 GQRTKSTGRTEGTIG 150 >gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata] gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata] Length = 154 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV AL I G+G + + +C + + +R +L + E+ ++ I Sbjct: 14 ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTQDEINKLVAII 73 Query: 61 EQ--DYQV-------EGDLRRTVAM-------------NIKRLMDLGCYRGLRHRRGLPV 98 +++V + D++ M +++RL + +RGLRH GL Sbjct: 74 SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|19113298|ref|NP_596506.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-] gi|162312104|ref|NP_588057.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe 972h-] gi|6831658|sp|O94754|RS18_SCHPO RecName: Full=40S ribosomal protein S18 gi|4481957|emb|CAB38515.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe] gi|157310505|emb|CAB58414.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe] Length = 152 Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ A+ I G+G + + +C K I +R +L E+ +I I Sbjct: 12 ILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTII 71 Query: 61 EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 + Q +G + +A N+ +RL + +RGLRH L V Sbjct: 72 QNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R K G Sbjct: 132 RGQHTKTTGRRGKTVG 147 >gi|320581243|gb|EFW95464.1| ribosomal protein S18B [Pichia angusta DL-1] Length = 150 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIRQA 59 R+ N+ +V+ AL I G+G + + +C K + +R +L + E ++ I Q Sbjct: 16 RLLNTNVDGRIKVMYALTTIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIMQN 75 Query: 60 IEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q DY V +L + +++RL + +RGLRH L VRG Sbjct: 76 PTQYKIPAWFLNRQADVVDGKDYHVLANNLESKLREDLERLKRMRAHRGLRHSWRLRVRG 135 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 136 QHTKTTGR 143 >gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga] gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva] Length = 154 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV AL I G+G + + +C + + +R +L + E+ ++ I Sbjct: 14 ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDITKRAGELTQDEINKLVAII 73 Query: 61 EQ--DYQV-------EGDLRRTVAM-------------NIKRLMDLGCYRGLRHRRGLPV 98 +++V + D++ M +++RL + +RGLRH GL Sbjct: 74 SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri] Length = 152 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++++ A+ I GIG + + + K + +R +L E EV ++ Sbjct: 14 RVMNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIMSN 73 Query: 57 -RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ QV + L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRHYWGLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|11467079|ref|NP_042555.1| ribosomal protein S13 [Acanthamoeba castellanii] gi|1173315|sp|P46760|RT13_ACACA RecName: Full=Ribosomal protein S13, mitochondrial gi|562060|gb|AAD11848.1| ribosomal protein S13 [Acanthamoeba castellanii] Length = 119 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 18/26 (69%), Positives = 20/26 (76%) Query: 87 YRGLRHRRGLPVRGQRTHTNARTRKK 112 Y G+RH LPVRGQRTHTNA+T K Sbjct: 88 YTGMRHILKLPVRGQRTHTNAKTPSK 113 >gi|195610746|gb|ACG27203.1| 40S ribosomal protein S18 [Zea mays] Length = 126 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 25/127 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---------------EQ 62 A+ I G+G + S +C K I +R +L E+ ++ + ++ Sbjct: 3 AMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPRQFKVPDWFLNRKK 62 Query: 63 DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 DY+ V L + +++RL + +RGLRH GL VRGQ T T R K Sbjct: 63 DYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV-- 120 Query: 116 GGVARKR 122 GV++KR Sbjct: 121 -GVSKKR 126 >gi|157876640|ref|XP_001686665.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin] gi|66476122|gb|AAY51369.1| ribosomal protein S18 [Leishmania major] gi|68129740|emb|CAJ09046.1| putative 40S ribosomal protein S18 [Leishmania major strain Friedlin] Length = 218 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 78 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137 Query: 61 ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98 ++D + + +M +++RL + +RG+RH GL V Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T+ R K G Sbjct: 198 RGQHTCTSGRHGKTVG 213 >gi|308450179|ref|XP_003088206.1| hypothetical protein CRE_02774 [Caenorhabditis remanei] gi|308461679|ref|XP_003093129.1| hypothetical protein CRE_12287 [Caenorhabditis remanei] gi|308248781|gb|EFO92733.1| hypothetical protein CRE_02774 [Caenorhabditis remanei] gi|308250761|gb|EFO94713.1| hypothetical protein CRE_12287 [Caenorhabditis remanei] Length = 154 Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K + +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELSEEDFDKIVTIMQN 73 Query: 63 DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100 Q + G L T N ++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154 >gi|66818921|ref|XP_643120.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4] gi|74926730|sp|Q869U7|RS18_DICDI RecName: Full=40S ribosomal protein S18 gi|60471198|gb|EAL69161.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4] Length = 154 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +++ AL + G+G + + +C K I +R +L + EV ++ + Sbjct: 14 IIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIM 73 Query: 61 EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q +G +A I +RL + +RG+RH GL V Sbjct: 74 NHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ+T T R + G G Sbjct: 134 RGQKTKTTGRRGRTVGVAG 152 >gi|88604135|ref|YP_504313.1| 30S ribosomal protein S13P [Methanospirillum hungatei JF-1] gi|121721492|sp|Q2FT96|RS13_METHJ RecName: Full=30S ribosomal protein S13P gi|88189597|gb|ABD42594.1| SSU ribosomal protein S13P [Methanospirillum hungatei JF-1] Length = 151 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 21/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V+ +L I G+G +++ I + + +L E+ V +IR+ + Sbjct: 11 FVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVV 70 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + + D+ TV +I L + YRG+RH G VR Sbjct: 71 SNYADRIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVR 130 Query: 100 GQRTHTNART 109 GQRT + RT Sbjct: 131 GQRTKSTGRT 140 >gi|147905776|ref|NP_001084747.1| ribosomal protein S18 [Xenopus laevis] gi|46329492|gb|AAH68873.1| MGC82306 protein [Xenopus laevis] Length = 152 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|242019380|ref|XP_002430139.1| ribosomal protein S18, putative [Pediculus humanus corporis] gi|212515230|gb|EEB17401.1| ribosomal protein S18, putative [Pediculus humanus corporis] Length = 137 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 22/124 (17%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---------- 56 NI ++V+ A+ I G+G + + + K I ++R + E EV +I Sbjct: 3 TNIDGKRKVMFAMTSIKGVGRRFANIVLKKADIDLDKRAGECSEEEVDKIITVLTNPRQY 62 Query: 57 --------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 RQ QD + +L + +++RL + +RG+RH GL VRGQ T Sbjct: 63 KIPDWFLNRQKDIQDGKYSQLTSTNLDSKLREDLERLKKIKAHRGMRHYWGLRVRGQHTK 122 Query: 105 TNAR 108 T R Sbjct: 123 TTGR 126 >gi|126697458|gb|ABO26686.1| 40S ribosomal protein S18 [Haliotis discus discus] Length = 154 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ AL I G+G + S + K I +R +L + EV ++ Sbjct: 14 ILRVMNTNIDGRTKIMFALTAIKGMGRRFSNVVLKKANIDLTKRAGELSDEEVDRVITVM 73 Query: 57 ---RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 74 TNPRQYKIPDWFLNRQKDVKDGKFNQVLANMLDNKLREDLERLKKIRNHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|321458683|gb|EFX69747.1| hypothetical protein DAPPUDRAFT_300691 [Daphnia pulex] Length = 152 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRILNTNIDGKIKIMFAVTSIKGVGRRYANVVLKKADIDLTKRAGELSEEEVEKLITIM 71 Query: 57 ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIKDGKFSQVTSNMLENKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|326434114|gb|EGD79684.1| 40S ribosomal protein S18 [Salpingoeca sp. ATCC 50818] Length = 154 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ + ++ +L I G+G + S K I ++R QL +V +I + ++ Sbjct: 14 RVLNTNLAGEENIMYSLTAIRGVGRRYSNLCLKKAEINQKQRAGQLNNDDVDRIVKVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q V DL + + +R+ + +RG+RH G+ VRG Sbjct: 74 PLQYKIPKWFLNRQKDPKDGAYQHCVANDLNSKLRDDFERMKKMRLHRGIRHMWGVRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GVA+K+ Sbjct: 134 QHTKTTGRRGKTV---GVAKKK 152 >gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii] Length = 184 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++++ AL I G+G + S +C K + +R ++ +V ++ Sbjct: 44 ILRVMNTNIDGRRKIMFALTAIKGVGRRYSNVVCKKADVDLTKRAXKISAIQVEKLITIM 103 Query: 57 ---RQAIEQDYQV-------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A N+ +R+ + +RGLRH GL V Sbjct: 104 SNPRQYKIPDWFLNRQKDVKDGKYSQVLANNLDNKLREDLERMKKIRAHRGLRHYWGLRV 163 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 164 RGQHTKTTGR 173 >gi|225710398|gb|ACO11045.1| 40S ribosomal protein S18 [Caligus rogercresseyi] Length = 152 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI + ++ A+ I GIG + + + K I +R +L E EV +I Sbjct: 14 RVMNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIMQN 73 Query: 57 -RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ + EG + ++ +++RL + +RGLRH G+ VRG Sbjct: 74 PRQYKIPDWFLNRQKDIKEGKTSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGVRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|124486067|ref|YP_001030683.1| 30S ribosomal protein S13P [Methanocorpusculum labreanum Z] gi|158706246|sp|A2SSW0|RS13_METLZ RecName: Full=30S ribosomal protein S13P gi|124363608|gb|ABN07416.1| SSU ribosomal protein S13P [Methanocorpusculum labreanum Z] Length = 150 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 26/144 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ + V AL I GIG ++ I + + + L + +V I + + Sbjct: 10 FVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQV 69 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + DL +I + + CYRG+RH GL VR Sbjct: 70 KAYPASVPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVR 129 Query: 100 GQRTHTNARTRKKFGK-GGVARKR 122 GQRT R FGK GV+++R Sbjct: 130 GQRTKATGR----FGKIVGVSKRR 149 >gi|62858571|ref|NP_001016358.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] gi|161611793|gb|AAI55979.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] gi|166796647|gb|AAI59393.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] Length = 152 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|168049335|ref|XP_001777119.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671562|gb|EDQ58112.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73 Query: 57 -RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ + +G + V+ +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDHKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++KR Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152 >gi|322699777|gb|EFY91536.1| 30S ribosomal protein S13 [Metarhizium acridum CQMa 102] Length = 119 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 K +I +V L V + + Q +E D RR V NI+RL D+G YRG RH G Sbjct: 3 KYSIHKLAKVGSLSPRTVTSLTAELSQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMG 61 Query: 96 LP 97 LP Sbjct: 62 LP 63 >gi|89257933|gb|ABD65245.1| ribosomal protein S18 [Stenella coeruleoalba] Length = 141 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 1 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 60 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 61 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 119 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 120 VRGQHTKTTGR 130 >gi|168004052|ref|XP_001754726.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694347|gb|EDQ80696.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73 Query: 57 -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKVPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++KR Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152 >gi|321263256|ref|XP_003196346.1| ribosomal protein S18 [Cryptococcus gattii WM276] gi|317462822|gb|ADV24559.1| ribosomal protein S18, putative [Cryptococcus gattii WM276] Length = 155 Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + +C K + +R +L E+ +I + Sbjct: 15 ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q +G + ++ +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPSWFLNRQRDITDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 135 RGQHTKTTGR 144 >gi|309262972|ref|XP_003085935.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|148668546|gb|EDL00865.1| mCG114988 [Mus musculus] Length = 152 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|148700464|gb|EDL32411.1| mCG116671 [Mus musculus] Length = 152 Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|213406555|ref|XP_002174049.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|213409073|ref|XP_002175307.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|212002096|gb|EEB07756.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|212003354|gb|EEB09014.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] Length = 152 Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I G+G + + C K + +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKNKVMYALTQIKGVGRRYANIACKKADVDMSKRAGELTTEELERLVTIV 71 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 + Q +G + +A N+ +RL + +RGLRH L V Sbjct: 72 QNPTQFKIPAWFLNRQKDITDGKSYQLLANNVDSKLRDDLERLKKIQAHRGLRHALDLRV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R K G Sbjct: 132 RGQHTKTTGRRGKTVG 147 >gi|198578|gb|AAA16796.1| ribosomal protein [Mus musculus] Length = 152 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLHNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|6755368|ref|NP_035426.1| 40S ribosomal protein S18 [Mus musculus] gi|11968182|ref|NP_072045.1| 40S ribosomal protein S18 [Homo sapiens] gi|47087103|ref|NP_998722.1| 40S ribosomal protein S18 [Rattus norvegicus] gi|47522714|ref|NP_999105.1| 40S ribosomal protein S18 [Sus scrofa] gi|75812924|ref|NP_001028786.1| 40S ribosomal protein S18 [Bos taurus] gi|189339186|ref|NP_001041547.1| 40S ribosomal protein S18 [Canis lupus familiaris] gi|55626404|ref|XP_518400.1| PREDICTED: similar to ribosomal protein [Pan troglodytes] gi|114606875|ref|XP_001170296.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes] gi|149732112|ref|XP_001497114.1| PREDICTED: similar to ribosomal protein S18 [Equus caballus] gi|291396021|ref|XP_002714578.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus] gi|291408932|ref|XP_002720764.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus] gi|293340584|ref|XP_002724624.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|293351981|ref|XP_002727879.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|296197873|ref|XP_002746441.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus] gi|297661285|ref|XP_002809198.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] gi|301757095|ref|XP_002914379.1| PREDICTED: 40S ribosomal protein S18-like [Ailuropoda melanoleuca] gi|50403620|sp|P62271|RS18_RAT RecName: Full=40S ribosomal protein S18 gi|50403625|sp|P62269|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3 gi|54039371|sp|P62272|RS18_PIG RecName: Full=40S ribosomal protein S18 gi|54039385|sp|P62270|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3 gi|62900940|sp|Q5TJE9|RS18_CANFA RecName: Full=40S ribosomal protein S18 gi|91207636|sp|Q3T0R1|RS18_BOVIN RecName: Full=40S ribosomal protein S18 gi|206558173|sp|A5JST6|RS18_CAPHI RecName: Full=40S ribosomal protein S18 gi|187609266|pdb|2ZKQ|MM Chain m, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|198580|gb|AAA16795.1| ribosomal protein [Mus musculus] gi|433447|emb|CAA40750.1| ribosomal protein S18 [Rattus rattus] gi|1841304|dbj|BAA19211.1| ribosomal protein [Sus scrofa] gi|3811382|gb|AAC69898.1| ribosomal protein subunit S18 [Mus musculus] gi|3820980|emb|CAA20231.1| ribosomal protein S18 [Homo sapiens] gi|4050105|gb|AAC97978.1| RPS18 [Mus musculus] gi|6006558|emb|CAB56794.1| ribosomal protein S18 [Homo sapiens] gi|26341376|dbj|BAC34350.1| unnamed protein product [Mus musculus] gi|46237544|emb|CAE83925.1| ribosomal protein S18 [Rattus norvegicus] gi|51980402|gb|AAH81459.1| Ribosomal protein S18 [Mus musculus] gi|51980469|gb|AAH81458.1| Ribosomal protein S18 [Mus musculus] gi|55956952|emb|CAI11439.1| ribosomal protein S18 [Canis lupus familiaris] gi|55961242|emb|CAI17530.1| ribosomal protein S18 [Homo sapiens] gi|55961291|emb|CAI18076.1| ribosomal protein S18 [Homo sapiens] gi|55961522|emb|CAI18127.1| ribosomal protein S18 [Homo sapiens] gi|55961771|emb|CAI17656.1| ribosomal protein S18 [Homo sapiens] gi|57209749|emb|CAI41848.1| ribosomal protein S18 [Homo sapiens] gi|62533209|gb|AAH93500.1| Ribosomal protein S18 [Mus musculus] gi|72679475|gb|AAI00605.1| Ribosomal protein S18 [Mus musculus] gi|74141885|dbj|BAE41010.1| unnamed protein product [Mus musculus] gi|74195924|dbj|BAE30520.1| unnamed protein product [Mus musculus] gi|74226926|dbj|BAE27106.1| unnamed protein product [Mus musculus] gi|74268023|gb|AAI02294.1| Ribosomal protein S18 [Bos taurus] gi|75517276|gb|AAI01787.1| Ribosomal protein S18 [Homo sapiens] gi|75517910|gb|AAI01789.1| Ribosomal protein S18 [Homo sapiens] gi|76779249|gb|AAI06064.1| Ribosomal protein S18 [Homo sapiens] gi|117558483|gb|AAI26073.1| Ribosomal protein S18 [Rattus norvegicus] gi|119624100|gb|EAX03695.1| ribosomal protein S18, isoform CRA_b [Homo sapiens] gi|147744669|gb|ABQ51201.1| ribosomal protein S18 [Capra hircus] gi|148678285|gb|EDL10232.1| mCG23000, isoform CRA_b [Mus musculus] gi|149043391|gb|EDL96842.1| rCG60872, isoform CRA_a [Rattus norvegicus] gi|168985411|emb|CAQ08021.1| ribosomal protein S18 [Homo sapiens] gi|168985731|emb|CAQ08251.1| ribosomal protein S18 [Homo sapiens] gi|197127178|gb|ACH43676.1| putative ribosomal protein S18 [Taeniopygia guttata] gi|296474555|gb|DAA16670.1| 40S ribosomal protein S18 [Bos taurus] gi|307685871|dbj|BAJ20866.1| ribosomal protein S18 [synthetic construct] Length = 152 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|58259960|ref|XP_567390.1| ribosomal protein S18 [Cryptococcus neoformans var. neoformans JEC21] gi|134116184|ref|XP_773263.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255885|gb|EAL18616.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229440|gb|AAW45873.1| ribosomal protein S18, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 155 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + +C K + +R +L E+ +I + Sbjct: 15 ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 61 EQDYQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 + Q +G + ++ +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPSWFLNRQRDISDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 135 RGQHTKTTGR 144 >gi|121512018|gb|ABM55460.1| ribosomal protein S18 [Xenopsylla cheopis] Length = 152 Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 RI NI ++V+ A+ I G+G + + + K + +R + E EV +I Sbjct: 14 RIMSTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIMST 73 Query: 57 -RQAIEQDYQV---------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ + L + +++R+ + +RG+RH GL VRG Sbjct: 74 PRQFKIPDWFLNRQKDIVDGRYSQLTSSSLDSKLREDLERMKKIKAHRGMRHYWGLRVRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|281338468|gb|EFB14052.1| hypothetical protein PANDA_002275 [Ailuropoda melanoleuca] Length = 152 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|318190651|ref|NP_001187081.1| 40S ribosomal protein S18 [Ictalurus punctatus] gi|41018101|sp|Q90YQ5|RS18_ICTPU RecName: Full=40S ribosomal protein S18 gi|15294049|gb|AAK95201.1|AF402827_1 40S ribosomal protein S18 [Ictalurus punctatus] Length = 152 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|225734652|gb|ACO25361.1| 40S ribosomal protein S18 [Gillichthys seta] gi|226442023|gb|ACO57601.1| 40S ribosomal protein S18 [Gillichthys mirabilis] Length = 142 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 6 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 65 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 66 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 126 RGQHTKTTGR 135 >gi|91083227|ref|XP_973632.1| PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum] gi|270007711|gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum] Length = 152 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI NI ++V+ AL I G+G + S + K + ++R + + EV +I Sbjct: 12 ILRILNTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSDEEVEKIVTIM 71 Query: 57 ---RQAIEQDYQ-------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ V+G + + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|302829312|ref|XP_002946223.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] gi|300269038|gb|EFJ53218.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] Length = 153 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ +++ A+ I GIG + S +C K + +R + E+ ++ + Sbjct: 15 RLLNTNVDGKNKIMYAMTAIKGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVAN 74 Query: 61 -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++D++ L + +++RL + +RGLRH GL VRG Sbjct: 75 PRAYKIPDWFLNRQKDHKTGRYSQLTSSGLDTALRDDLERLKKIRNHRGLRHYWGLRVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GVA+K+ Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153 >gi|28626512|ref|NP_775341.1| 40S ribosomal protein S18 [Danio rerio] gi|41018061|sp|Q8JGS9|RS18_DANRE RecName: Full=40S ribosomal protein S18 gi|20977555|gb|AAM28205.1| 40S ribosomal protein S18 [Danio rerio] gi|38566120|gb|AAH62289.1| Ribosomal protein S18 [Danio rerio] gi|126632524|emb|CAM56557.1| ribosomal protein S18 [Danio rerio] Length = 152 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|74197062|dbj|BAE35083.1| unnamed protein product [Mus musculus] gi|74204663|dbj|BAE35401.1| unnamed protein product [Mus musculus] Length = 152 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIRGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|168024894|ref|XP_001764970.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683779|gb|EDQ70186.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73 Query: 57 -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++KR Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152 >gi|168004046|ref|XP_001754723.1| predicted protein [Physcomitrella patens subsp. patens] gi|168049271|ref|XP_001777087.1| predicted protein [Physcomitrella patens subsp. patens] gi|168052464|ref|XP_001778670.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669988|gb|EDQ56565.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671530|gb|EDQ58080.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694344|gb|EDQ80693.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73 Query: 57 -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ V L + +++RL + +RGLRH GL VRG Sbjct: 74 PRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++KR Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152 >gi|60417186|emb|CAH57704.1| 40S ribosomal protein S18 [Platichthys flesus] gi|116488056|gb|ABJ98610.1| 40S ribosomal protein S18 [Scophthalmus maximus] gi|124300823|dbj|BAF45907.1| ribosomal protein S18 [Solea senegalensis] Length = 152 Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|303289004|ref|XP_003063790.1| ribosomal protein S18 [Micromonas pusilla CCMP1545] gi|226454858|gb|EEH52163.1| ribosomal protein S18 [Micromonas pusilla CCMP1545] Length = 144 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I GIG + + +C K I +R +L +E+ + + Sbjct: 13 ILRVLNTNVDGRTKVMYALTQIRGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIV 72 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ L + +++RL + +RGLRH G+ V Sbjct: 73 ANPRQFRIPDWFLNRQKDYKDGKYVQLTSNALDTKLRDDLERLKKIRNHRGLRHYWGIRV 132 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 133 RGQHTKTTGR 142 >gi|71005082|ref|XP_757207.1| hypothetical protein UM01060.1 [Ustilago maydis 521] gi|46096569|gb|EAK81802.1| hypothetical protein UM01060.1 [Ustilago maydis 521] Length = 154 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V AL I G+G + + +C K I +R +L E+ +I + Sbjct: 15 ILRLLNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLSKRAGELNSDELERIVTIL 74 Query: 61 EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 + + V+G + ++ NI +RL + +RG+RH GL V Sbjct: 75 QNPAEFKIPSWFLNRQRDIVDGKSSQLLSNNIDSKLRDDLERLKKIKAHRGIRHYLGLRV 134 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 135 RGQHTKTTGR 144 >gi|327289179|ref|XP_003229302.1| PREDICTED: 40S ribosomal protein S18-like [Anolis carolinensis] Length = 197 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 57 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 116 Query: 58 QAIEQ----DYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 117 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 176 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 177 RGQHTKTTGR 186 >gi|312380810|gb|EFR26705.1| hypothetical protein AND_25954 [Anopheles darlingi] Length = 146 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I + Sbjct: 6 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIV 65 Query: 61 E--------------QDYQVEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q V+G + + NI +RL + +RG+RH GL V Sbjct: 66 SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHHWGLRV 125 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 126 RGQHTKTTGR 135 >gi|110671476|gb|ABG81989.1| putative ribosomal protein S18 [Diaphorina citri] Length = 153 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 31/135 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++V+ AL I G G + S + K I +R + E EV +I Sbjct: 12 ILRVMSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM 71 Query: 57 ---RQAIEQDY--------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 RQ D+ Q++ LR +++RL + +RG+RH Sbjct: 72 TNPRQYKIPDWFLNRQKDIVDGKYSQLTSTAQLDSKLRE----DLERLKKIRAHRGMRHY 127 Query: 94 RGLPVRGQRTHTNAR 108 GL VRGQ T T R Sbjct: 128 WGLRVRGQHTKTTGR 142 >gi|158289973|ref|XP_311570.4| AGAP010375-PA [Anopheles gambiae str. PEST] gi|157018416|gb|EAA07206.5| AGAP010375-PA [Anopheles gambiae str. PEST] Length = 152 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITII 71 Query: 61 E--------------QDYQVEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98 Q V+G + + NI +RL + +RG+RH GL V Sbjct: 72 SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|47570246|ref|ZP_00240897.1| 30S ribosomal protein s13 [Bacillus cereus G9241] gi|47553070|gb|EAL11470.1| 30S ribosomal protein s13 [Bacillus cereus G9241] Length = 30 Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust. Identities = 19/26 (73%), Positives = 22/26 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIG 26 MARIAGV+IPR KRVV +L Y+ GIG Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIG 26 >gi|159476746|ref|XP_001696472.1| ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|158282697|gb|EDP08449.1| ribosomal protein S18 [Chlamydomonas reinhardtii] Length = 153 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ +++ A+ I GIG + S +C K + +R + E+ ++ + Sbjct: 15 RLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVAN 74 Query: 61 -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++D++ L + +++RL + +RGLRH GL VRG Sbjct: 75 PRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GVA+K+ Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153 >gi|293347481|ref|XP_002726601.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQ----DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|293359376|ref|XP_002729551.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQ----DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ QV + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|297737051|emb|CBI26252.3| unnamed protein product [Vitis vinifera] Length = 126 Score = 40.8 bits (94), Expect = 0.064, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 25/127 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---------------EQ 62 AL I GIG + + +C K + +R +L +E+ + + ++ Sbjct: 3 ALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKK 62 Query: 63 DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 DY+ V L + +++RL + +RGLRH GL VRGQ T T R K Sbjct: 63 DYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV-- 120 Query: 116 GGVARKR 122 GV++KR Sbjct: 121 -GVSKKR 126 >gi|167527167|ref|XP_001747916.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773665|gb|EDQ87303.1| predicted protein [Monosiga brevicollis MX1] Length = 154 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 26/141 (18%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59 R+ NI + ++ A+ I G+G + S K I RR +L E +V + I Q Sbjct: 14 RVMNTNIAGDRNIMYAMTAIKGVGRRYSNLCLKKAEISTRRRAGELTEDDVRRVVTIMQN 73 Query: 60 IEQ----DYQVE---------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q D+ + DL + +++R+ + +RG+RH G+ VRG Sbjct: 74 PRQYKIPDWFLNRKKDIKDGTYSQLLASDLNVKLRDDLERMKKIRLHRGIRHYWGVRVRG 133 Query: 101 QRTHTNARTRKKFG----KGG 117 Q T T R + G KGG Sbjct: 134 QHTKTTGRRGRTVGVSKKKGG 154 >gi|114606877|ref|XP_001170149.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes] Length = 143 Score = 40.8 bits (94), Expect = 0.065, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E E RQ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDE--NPRQYK 69 Query: 61 EQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 D+ + +G + +A +++RL + +RGLRH GL VRGQ T T Sbjct: 70 IPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKT 129 Query: 106 NAR 108 R Sbjct: 130 TGR 132 >gi|328852742|gb|EGG01885.1| hypothetical protein MELLADRAFT_91715 [Melampsora larici-populina 98AG31] Length = 156 Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 74 Query: 61 E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +QV + L + +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPNWFLNRQRDIVDGKSFQVLSNGLDSKMREDLERLKKIRAHRGLRHYWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|290985905|ref|XP_002675665.1| ribosomal protein S13 [Naegleria gruberi] gi|284089263|gb|EFC42921.1| ribosomal protein S13 [Naegleria gruberi] Length = 156 Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + + AL + GIG + + + K I +R +L E ++ +I+ I Sbjct: 14 LLRLFNTNIEGRRSALYALTSVKGIGRRFAGIVLKKAEIELTKRSGELSEEQINKIQDII 73 Query: 61 --EQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 + Y++ G VA +++RL + RGLRH GL V Sbjct: 74 LAPEKYKIPSWFLNRRRDWKSGATEHLVANAVDMYLREDLERLKKIKSERGLRHMWGLRV 133 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R K G Sbjct: 134 RGQHTKTTGRRGKTVG 149 >gi|225714468|gb|ACO13080.1| 40S ribosomal protein S18 [Lepeophtheirus salmonis] Length = 152 Score = 40.4 bits (93), Expect = 0.075, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI + ++ A+ I GIG + + + K I +R +L E EV +I Sbjct: 12 ILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + EG + ++ +++RL + +RGLRH G+ V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|70992765|ref|XP_751231.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293] gi|66848864|gb|EAL89193.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293] gi|159130314|gb|EDP55427.1| ribosomal protein S13p/S18e [Aspergillus fumigatus A1163] Length = 127 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE---------------- 61 AL I G+G + S +C K + +R +L E+ +I ++ Sbjct: 3 ALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPTQYKIPTWFLNRQR 62 Query: 62 -----QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 +D QV + L + +++RL + +RGLRH GL VRGQ T T R Sbjct: 63 DIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR 115 >gi|27658598|ref|XP_226269.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59 R+ N+ +++ A+ I G+G++ + + K I +R +L E EV I I Q Sbjct: 14 RVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQN 73 Query: 60 IEQDYQVEGDLRRTVAM-------------------NIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L R M +++R+ + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDMKDGKYSQVLANSLDNKLREDLERVKKIRAHRGLRHFWGLRVRG 133 Query: 101 QRTHTNAR 108 + T T R Sbjct: 134 RHTKTTGR 141 >gi|331219824|ref|XP_003322588.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301578|gb|EFP78169.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 215 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 22/134 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ N+ +++ AL I G+G + + C K + +R +L E+ +I I+ Sbjct: 77 RLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTIIQN 136 Query: 62 --------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + YQV + L + +++RL + +RGLRH GL VRG Sbjct: 137 PAQFKIPAWFLNRQRDIVDGKSYQVLSNGLDSKLREDLERLKKIRAHRGLRHYWGLRVRG 196 Query: 101 QRTHTNARTRKKFG 114 Q T T R K G Sbjct: 197 QHTKTTGRRGKTVG 210 >gi|75764943|ref|ZP_00744281.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487567|gb|EAO51445.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 30 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 19/26 (73%), Positives = 22/26 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIG 26 MARIAGV+IPR KRVV +L Y+ GIG Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIG 26 >gi|109097924|ref|XP_001085646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca mulatta] gi|297263054|ref|XP_002798738.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] gi|297263056|ref|XP_002798739.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] Length = 152 Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIYGQRKIAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 + +Q +G + +A +++RL + +RGL H GL V Sbjct: 72 QNPHQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|313126020|ref|YP_004036290.1| SSU ribosomal protein s13p [Halogeometricum borinquense DSM 11551] gi|312292385|gb|ADQ66845.1| SSU ribosomal protein S13P [Halogeometricum borinquense DSM 11551] Length = 172 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E ++ DL + +I R+ + Y+G+RH+RG VRGQRT + RT G Sbjct: 101 ETTHKTGSDLEQKRRHDINRMKMINSYKGVRHKRGQKVRGQRTKSTGRTEGTIG 154 >gi|225703456|gb|ACO07574.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 40.0 bits (92), Expect = 0.091, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152 >gi|256084884|ref|XP_002578655.1| 40S ribosomal protein S18 [Schistosoma mansoni] gi|238664036|emb|CAZ34893.1| 40S ribosomal protein S18, putative [Schistosoma mansoni] Length = 152 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 22/123 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K I +R +L E EV ++ + Sbjct: 12 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTEDEVEKLVTVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + G L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDVDDGKHSQLMSGALETKLREDLERLKRIRSHRGIRHYWGLRV 131 Query: 99 RGQ 101 RGQ Sbjct: 132 RGQ 134 >gi|302782790|ref|XP_002973168.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii] gi|300158921|gb|EFJ25542.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii] Length = 156 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 31/147 (21%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 14 RVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVAN 73 Query: 61 -------------EQDYQVEGDLRRTVA--MNIKRLMDL----------GCYRGLRHRRG 95 ++DY+ +G + VA +++K DL +RGLRH G Sbjct: 74 PRQFKIPDWFLNRKKDYK-DGRYSQVVANALDMKLRDDLERLKKIRQAYSDHRGLRHYWG 132 Query: 96 LPVRGQRTHTNARTRKKFGKGGVARKR 122 L VRGQ T T R + GV++KR Sbjct: 133 LRVRGQHTKTTERRGRTV---GVSKKR 156 >gi|148362150|gb|ABQ59673.1| ribosomal protein S18 [Salmo salar] gi|197631783|gb|ACH70615.1| ribosomal protein S18 [Salmo salar] gi|209732176|gb|ACI66957.1| 40S ribosomal protein S18 [Salmo salar] gi|209733230|gb|ACI67484.1| 40S ribosomal protein S18 [Salmo salar] gi|209736928|gb|ACI69333.1| 40S ribosomal protein S18 [Salmo salar] gi|209738224|gb|ACI69981.1| 40S ribosomal protein S18 [Salmo salar] gi|223646140|gb|ACN09828.1| 40S ribosomal protein S18 [Salmo salar] gi|223646324|gb|ACN09920.1| 40S ribosomal protein S18 [Salmo salar] gi|223671987|gb|ACN12175.1| 40S ribosomal protein S18 [Salmo salar] gi|223672171|gb|ACN12267.1| 40S ribosomal protein S18 [Salmo salar] gi|225703166|gb|ACO07429.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225703728|gb|ACO07710.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225705884|gb|ACO08788.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225716168|gb|ACO13930.1| 40S ribosomal protein S18 [Esox lucius] gi|260182164|gb|ACX35593.1| ribosomal protein S18 [Salmo salar] gi|260182178|gb|ACX35606.1| ribosomal protein S18 [Salmo salar] gi|307147577|gb|ADN37677.1| ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|229367816|gb|ACQ58888.1| 40S ribosomal protein S18 [Anoplopoma fimbria] Length = 152 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|209738282|gb|ACI70010.1| 40S ribosomal protein S18 [Salmo salar] Length = 152 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L + EV + I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVEGVVTIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|123492382|ref|XP_001326044.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|121908953|gb|EAY13821.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] Length = 155 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV--ESEVI---- 54 M R+ N+ + + AL I GIG + + + + + P RR L E E+I Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 55 ------QI----------RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 QI R + + V DL + I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T + R + G GV RK+ Sbjct: 134 RGQCTKSTGR---RGGALGVERKK 154 >gi|61654738|gb|AAX48895.1| S18 [Suberites domuncula] Length = 152 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 30/134 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ NI ++++ L I G+G + + + K + +R +L E E VI I Sbjct: 12 ILRVLNTNIDGHQKIMFGLTAIKGVGRRYANLVLKKADVDMNKRAGELSEEEIERVITIM 71 Query: 58 QAIEQ----DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 Q Q D+ Q+E LR +++RL + +RGLRH Sbjct: 72 QNPRQYKIPDWFLNRQKDHRDGKYSQILANQLEHKLRE----DLERLKKIRAHRGLRHYW 127 Query: 95 GLPVRGQRTHTNAR 108 G+ VRGQ T T R Sbjct: 128 GVRVRGQHTKTTGR 141 >gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata] Length = 154 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + + K + +R +L + EV + I Sbjct: 12 ILRVMNTNIDGRIKIMYALTAIKGVGRRYANLVLKKADVDLRKRAGELTDEEVEAVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 NNPKQYKIPNWFLNRQKDIKDGKYMQVTSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|328767380|gb|EGF77430.1| hypothetical protein BATDEDRAFT_91663 [Batrachochytrium dendrobatidis JAM81] Length = 165 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57 + R+ NI ++++ AL I GIG + + + K I +R ++ E V+ I Sbjct: 24 IIRLLNTNIDGKRKIMYALTSIKGIGRRYANLVLKKADIDLNKRAGEVTNDELERVVTIM 83 Query: 58 QAIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH G+ Sbjct: 84 QNPRQ-YKIPDWFLNRQKDIKDGKYTQVIANALDNKLREDLERLKKIRAHRGLRHYWGVR 142 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 143 VRGQHTKTTGR 153 >gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea] Length = 152 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56 R+ NI ++ A+ I GIG + + + K I +R +L E EV Q+ Sbjct: 14 RVFNTNIDGNICILHAMTAIKGIGRRYAHAVLRKADIDIRKRAGELAEEEVQQVVTIMSN 73 Query: 57 -RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRG 100 RQ D+ + +G + +A +++R+ + +RGLRH GL RG Sbjct: 74 PRQYKIPDWYLNRQRDIKDGKTSQVIANGLDNKMREDMERMKKIRLHRGLRHYWGLRTRG 133 Query: 101 QRTHTNAR 108 Q T T R Sbjct: 134 QHTKTTGR 141 >gi|508718|gb|AAC36889.1| homolog [Chlamydia trachomatis] Length = 46 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 29/44 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR 44 M RI G++IP K++ +L YI+GIG S++I +L + PE R Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEAR 44 >gi|148679456|gb|EDL11403.1| mCG9349 [Mus musculus] Length = 143 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L + EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTQDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|225704576|gb|ACO08134.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKRIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|149264635|ref|XP_001473856.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 152 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGL H GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|114588265|ref|XP_001147895.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes] gi|114588267|ref|XP_001147958.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes] gi|114588269|ref|XP_001148030.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes] gi|114588271|ref|XP_001148104.1| PREDICTED: similar to ribosomal protein isoform 4 [Pan troglodytes] gi|114588273|ref|XP_001148176.1| PREDICTED: similar to ribosomal protein isoform 5 [Pan troglodytes] Length = 152 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K +R +L + EV I I Sbjct: 12 ILRVLNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHLWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|146304895|ref|YP_001192211.1| 30S ribosomal protein S13P [Metallosphaera sedula DSM 5348] gi|145703145|gb|ABP96287.1| SSU ribosomal protein S13P [Metallosphaera sedula DSM 5348] Length = 165 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ G ++ + L + GIG+ +++ I KL I ++R+ +L + E+ +I Sbjct: 9 IVRLFGQDVDGTMKAPYGLAMVKGIGYNTARVILMKLNIDKDKRLGELTDHELKKIEEML 68 Query: 57 ---------------RQAIE--QD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 R+ IE QD + V DL V +I+R L +RG+RH GL V Sbjct: 69 ANKKIESLPAWIFNRRKDIESGQDLHYVTSDLVFVVRNDIEREKKLKSWRGVRHSLGLKV 128 Query: 99 RG 100 RG Sbjct: 129 RG 130 >gi|327239254|gb|AEA39494.1| ribosomal protein S18 [Ailuropoda melanoleuca] gi|327239350|gb|AEA39542.1| ribosomal protein S18 [Ailuropoda melanoleuca] Length = 152 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLG 130 Query: 98 VRGQRTHTNAR 108 RGQ T T R Sbjct: 131 ERGQHTKTTGR 141 >gi|330834006|ref|YP_004408734.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4] gi|329566145|gb|AEB94250.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4] Length = 163 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ +V L I GIG+ +++ I KL I +RR+ +L + E+ +I + + Sbjct: 9 IVRLFGQDVDGTMKVPYGLAMIKGIGYNTARVILMKLNIDKDRRLGELNDHELKKIEEFL 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R + +RG+RH GL V Sbjct: 69 SNKRLETLPSWMYNRRKDLETGLDMHYVTSDLVFVVRNDIEREKKIKSWRGIRHSLGLKV 128 Query: 99 RG 100 RG Sbjct: 129 RG 130 >gi|297670462|ref|XP_002813387.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] Length = 152 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI ++ A+ I G+G + + + K I +R +L EV I I Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71 Query: 58 QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ + +G + +A +++RL + +RGLRH G V Sbjct: 72 QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131 Query: 99 RGQRTHTNAR 108 RGQRT T R Sbjct: 132 RGQRTKTTGR 141 >gi|227831062|ref|YP_002832842.1| 30S ribosomal protein S13P [Sulfolobus islandicus L.S.2.15] gi|227457510|gb|ACP36197.1| ribosomal protein S13 [Sulfolobus islandicus L.S.2.15] Length = 166 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ I Sbjct: 8 VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVI 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R +RG+RH GL V Sbjct: 68 SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127 Query: 99 RG 100 RG Sbjct: 128 RG 129 >gi|229579943|ref|YP_002838342.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.G.57.14] gi|229581396|ref|YP_002839795.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.N.15.51] gi|229585534|ref|YP_002844036.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.27] gi|238620496|ref|YP_002915322.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.4] gi|284998558|ref|YP_003420326.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5] gi|228010658|gb|ACP46420.1| ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14] gi|228012112|gb|ACP47873.1| ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51] gi|228020584|gb|ACP55991.1| ribosomal protein S13 [Sulfolobus islandicus M.16.27] gi|238381566|gb|ACR42654.1| ribosomal protein S13 [Sulfolobus islandicus M.16.4] gi|284446454|gb|ADB87956.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5] gi|323475374|gb|ADX85980.1| ribosomal protein S13 [Sulfolobus islandicus REY15A] gi|323478099|gb|ADX83337.1| ribosomal protein S13 [Sulfolobus islandicus HVE10/4] Length = 166 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ I Sbjct: 8 VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVI 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R +RG+RH GL V Sbjct: 68 SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127 Query: 99 RG 100 RG Sbjct: 128 RG 129 >gi|125546023|gb|EAY92162.1| hypothetical protein OsI_13875 [Oryza sativa Indica Group] gi|125588230|gb|EAZ28894.1| hypothetical protein OsJ_12934 [Oryza sativa Japonica Group] Length = 170 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 43/160 (26%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI----------PPERR-------- 44 R+ N+ ++++ AL I G+G + S C K I PP RR Sbjct: 14 RLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPPPPSRRQISVMVGG 73 Query: 45 VHQLVESEVIQIRQAI---------------EQDYQ-------VEGDLRRTVAMNIKRLM 82 +L E+ ++ + ++DY+ V L + +++RL Sbjct: 74 AGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLK 133 Query: 83 DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +RGLRH GL VRGQ T T R K GV++KR Sbjct: 134 KIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 170 >gi|123367594|ref|XP_001297089.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123448087|ref|XP_001312777.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123453508|ref|XP_001314734.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123475112|ref|XP_001320735.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123479230|ref|XP_001322774.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123482954|ref|XP_001323914.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123503102|ref|XP_001328438.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|121877055|gb|EAX84159.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121894636|gb|EAX99847.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121897372|gb|EAY02495.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121903547|gb|EAY08512.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121905626|gb|EAY10551.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121906788|gb|EAY11691.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121911381|gb|EAY16215.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] Length = 155 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV--ESEVI---- 54 M R+ N+ + + AL I GIG + + + + + P RR L E E+I Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 55 ------QI----------RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 QI R + + V DL + I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLGANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T + R + G GV RK+ Sbjct: 134 RGQCTKSTGR---RGGALGVERKK 154 >gi|299830268|ref|YP_003734432.1| ribosomal protein S13 [Paramecium caudatum] gi|299507827|emb|CAZ66811.1| ribosomal protein S13 [Paramecium caudatum] Length = 244 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 16/29 (55%), Positives = 20/29 (68%) Query: 84 LGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 L Y+G RH +GLP RGQRT +NA + K Sbjct: 90 LWNYKGWRHFKGLPCRGQRTWSNAWSSYK 118 >gi|109073773|ref|XP_001099137.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] gi|109073775|ref|XP_001099240.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] gi|297292315|ref|XP_002804060.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] gi|297292317|ref|XP_002804061.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] Length = 152 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 24/137 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRQKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNARTRKKFG 114 VRGQ T R + G Sbjct: 131 VRGQHAKTTGRCGRTVG 147 >gi|119600195|gb|EAW79789.1| hCG1777176, isoform CRA_b [Homo sapiens] Length = 152 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K +R +L + EV I I Sbjct: 12 ILRVLNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407] Length = 156 Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++VV AL + G G + + + K I R +L ++ +I + Sbjct: 14 IIRLLNTNIDGKQKVVYALTKVKGCGRRYANIVAKKADIDLNLRAGELTAEQLERIVSIL 73 Query: 61 EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + +A +++RL + +RGLRH GL V Sbjct: 74 QSPTQYKIPSWFLNRQRDIVDGKDSQILANGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 134 RGQHTKTTGR 143 >gi|1350947|sp|P49202|RS18_CHLRE RecName: Full=40S ribosomal protein S18 gi|624957|emb|CAA58668.1| ribosomal protein S18 [Chlamydomonas reinhardtii] gi|1587084|prf||2205351A ribosomal protein S18 Length = 153 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ N+ +++ A+ I GIG + S +C K + + + E+ ++ + Sbjct: 15 RLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIVAN 74 Query: 61 -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++D++ L + +++RL + +RGLRH GL VRG Sbjct: 75 PRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GVA+K+ Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153 >gi|67478589|ref|XP_654681.1| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|167379766|ref|XP_001735274.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|56471746|gb|EAL49291.1| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] gi|165902807|gb|EDR28533.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] Length = 143 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I + Sbjct: 1 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 60 Query: 61 EQ--DYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 +Y++ +G + +A +I+ L + +RGLRH GL V Sbjct: 61 NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 120 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 121 RGQHTKTTGRRGRTVG 136 >gi|212531371|ref|XP_002145842.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] gi|210071206|gb|EEA25295.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] Length = 127 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 22/113 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------------ 65 AL I G+G + S +C K + +R + E+ +I I+ Q Sbjct: 3 ALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPTQYKIPAWFLNRQR 62 Query: 66 ----------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + + + +++RL + +RGLRH GL VRGQ T T R Sbjct: 63 DITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR 115 >gi|167378734|ref|XP_001734909.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|167381370|ref|XP_001735684.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|183231655|ref|XP_654098.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|183233172|ref|XP_653090.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|165902209|gb|EDR28096.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] gi|165903334|gb|EDR28910.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] gi|169801707|gb|EAL47704.2| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] gi|169802392|gb|EAL48712.2| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] Length = 155 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I + Sbjct: 13 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72 Query: 61 EQ--DYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 +Y++ +G + +A +I+ L + +RGLRH GL V Sbjct: 73 NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 133 RGQHTKTTGR 142 >gi|269862378|ref|XP_002650814.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|269862740|ref|XP_002650957.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|269864585|ref|XP_002651624.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220064177|gb|EED42431.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220065356|gb|EED43099.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220065576|gb|EED43243.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] Length = 161 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 30/133 (22%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI K++V AL I G+G + ++ + + P + +L E+ I+ I++ Sbjct: 23 RLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVIDE 82 Query: 63 -------DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96 +Y +++GDLR M I++ RG R GL Sbjct: 83 PLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLR----MLIEKAKKFKEIRGCRLAMGL 138 Query: 97 PVRGQRTHTNART 109 GQRT +N R Sbjct: 139 KCNGQRTRSNGRN 151 >gi|1350948|sp|P48151|RS18_ENTHI RecName: Full=40S ribosomal protein S18 gi|509603|gb|AAD09140.1| ribosomal protein S18 [Entamoeba histolytica] Length = 155 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 30/134 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I Sbjct: 13 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72 Query: 57 --------------RQAIEQDYQ--------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 RQ +D + VE LR +I+ L + +RGLRH Sbjct: 73 TTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLRE----DIEALKKMRAHRGLRHYW 128 Query: 95 GLPVRGQRTHTNAR 108 GL VRGQ T T R Sbjct: 129 GLRVRGQNTKTTGR 142 >gi|227828304|ref|YP_002830084.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.14.25] gi|227460100|gb|ACP38786.1| ribosomal protein S13 [Sulfolobus islandicus M.14.25] Length = 166 Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust. Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ + Sbjct: 8 VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVL 67 Query: 61 E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ V DL V +I+R +RG+RH GL V Sbjct: 68 SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127 Query: 99 RG 100 RG Sbjct: 128 RG 129 >gi|116754907|ref|YP_844025.1| 30S ribosomal protein S13P [Methanosaeta thermophila PT] gi|121694236|sp|A0B9L1|RS13_METTP RecName: Full=30S ribosomal protein S13P gi|116666358|gb|ABK15385.1| SSU ribosomal protein S13P [Methanosaeta thermophila PT] Length = 159 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I G+G + ++ K + P + +L E ++ ++ I Sbjct: 15 IVRIYNTDLDGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVI 74 Query: 61 EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E D V G ++ T+ ++ + Y+G+RH GL VR Sbjct: 75 ESVRDNIPAWMMNRRKDIITGVDKHVMGAEVLTTLREDLDIMKKTRSYKGIRHELGLRVR 134 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R+ GV RK+ Sbjct: 135 GQRTRSTGRSGATV---GVTRKK 154 >gi|37779106|gb|AAP20213.1| 40S ribosomal protein S18 [Pagrus major] Length = 140 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQA 59 NI +++ A+ I G+G + + + K I +R +L + EV ++ RQ Sbjct: 6 TNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPRQY 65 Query: 60 IEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 D+ + +G + +A +++RL + +RGLRH GL VRGQ T Sbjct: 66 KIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTK 125 Query: 105 TNAR 108 T R Sbjct: 126 TTGR 129 >gi|141013|sp|P15609|YM08_PARTE RecName: Full=Uncharacterized mitochondrial protein ORF8 gi|578757|emb|CAA34049.1| unnamed protein product [Paramecium aurelia] Length = 241 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 21/35 (60%) Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 A NI + YR RH +GLP RGQRT +NA + Sbjct: 78 AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASS 112 >gi|8928596|ref|NP_059401.1| ribosomal protein S13 [Paramecium aurelia] Length = 244 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 21/35 (60%) Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 A NI + YR RH +GLP RGQRT +NA + Sbjct: 81 AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASS 115 >gi|300120359|emb|CBK19913.2| unnamed protein product [Blastocystis hominis] gi|300175444|emb|CBK20755.2| unnamed protein product [Blastocystis hominis] gi|300175526|emb|CBK20837.2| unnamed protein product [Blastocystis hominis] Length = 111 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE--------------GDLRRTVAMNI 78 +C K I RR +L E+ ++ I Q + G R+ V+ N+ Sbjct: 3 VCKKAEIDISRRAGELSNDEIEKLIAVISTPLQFDIPEWFLNRQKDVETGKYRQVVSNNL 62 Query: 79 K--------RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVARKR 122 + RL + RGLRH L VRGQ T T R FGK GV+ K+ Sbjct: 63 QANLREDLNRLKKMRANRGLRHYWNLKVRGQHTKTTGR----FGKSVGVSTKK 111 >gi|109083515|ref|XP_001098938.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] Length = 152 Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 24/137 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI ++ A+ I G+G + + + K +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 72 QNPRQ-YKIPDRFLNRQKDVKDGKYSQALANGLDNNLRKDLERLKKIQAHRGLRHFWGLC 130 Query: 98 VRGQRTHTNARTRKKFG 114 V+GQ T T R + G Sbjct: 131 VQGQHTKTTGRRGRTMG 147 >gi|263173239|gb|ACY69887.1| S18e ribosomal protein [Cimex lectularius] Length = 131 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 22/118 (18%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------- 65 ++V+ A+ I G+G + + + K + ++R + E EV +I ++ Q Sbjct: 3 RKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKILTIMQNPRQYKIPDWF 62 Query: 66 -------VEG--------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 VEG L + +++RL + +RG+RH GL VRGQ T T R Sbjct: 63 LNRQKDIVEGKYFQLTSASLDAKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 120 >gi|297712488|ref|XP_002832792.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] Length = 152 Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI ++ A+ I G+G + + + K I +R +L EV I I Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71 Query: 58 QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98 Q Q D+ + +G + +A +++RL + +RGLRH G V Sbjct: 72 QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|7861934|gb|AAF70446.1|AF210641_1 Ke3 [Danio rerio] Length = 126 Score = 37.0 bits (84), Expect = 0.77, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 22/118 (18%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQAIEQDYQ 65 +++ A+ I G+G + + + K I +R +L E EV ++ RQ D+ Sbjct: 2 RKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDWF 61 Query: 66 V-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + +G + +A +++RL + +RGLRH GL VRGQ T T R Sbjct: 62 LNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 119 >gi|56754053|gb|AAW25217.1| unknown [Schistosoma japonicum] Length = 149 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 25/138 (18%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ- 65 NI +++ A+ I G+G + + + K I +R +L + EV ++ + Q Sbjct: 15 TNIGGQLKIMYAITSIRGVGSRYANVVGKKADIALTKRAGELTDDEVEKLVPVMSNPSQY 74 Query: 66 ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 + L + +++RL + +RG+RH GL VRGQ T Sbjct: 75 KIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRVRGQHTK 134 Query: 105 TNARTRKKFGKGGVARKR 122 T R + GV+RK+ Sbjct: 135 TTGRRGRTV---GVSRKK 149 >gi|157361543|gb|ABV44729.1| 40S ribosomal protein S18-like protein [Phlebotomus papatasi] Length = 152 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R NI ++V A+ I G+G + + K + +R + + EV ++ I Sbjct: 12 ILRFMNTNIDGKRKVPIAMTAIKGVGRRYANIALKKADVDLSKRAGECTDEEVERVVAVI 71 Query: 61 EQD---------------------YQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + YQ+ L + +++RL + +RGLRH GL V Sbjct: 72 QNPRIYKIPDWFLNRQKDVTDGKYYQLTSAVLESKLRDDLERLKKICAHRGLRHHWGLRV 131 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 132 RGQHTKTTGR 141 >gi|115484775|ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group] gi|113644753|dbj|BAF27894.1| Os11g0224300 [Oryza sativa Japonica Group] Length = 383 Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQ---DICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 V + AKR + LC+ + +K + ++ KL +PP+ +VH +V V +++AI D Sbjct: 270 VQMSVAKRSCQKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVV--HVSLLKKAIRPD 327 Query: 64 YQVEGDL 70 QV+ DL Sbjct: 328 VQVQADL 334 >gi|296214070|ref|XP_002753551.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus] Length = 152 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI +++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++R + ++GLRH L Sbjct: 72 QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDLERQKKIWAHKGLRHFWDLR 130 Query: 98 VRGQRTHTNAR 108 VRGQ T T R Sbjct: 131 VRGQHTKTTGR 141 >gi|253745946|gb|EET01539.1| Ribosomal protein S18 [Giardia intestinalis ATCC 50581] Length = 154 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 22/113 (19%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE---------------Q 62 AL I GIG + + K I +R +L +E + + +E Sbjct: 30 ALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPLSHGIPAWMLNRNN 89 Query: 63 DYQVEGDLR---RTVA----MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 D++ D+ T+A M+++RL C RG+RH L VRGQ T + R Sbjct: 90 DFESGKDMHILVNTIASTHRMDLERLRKTRCERGVRHHHNLKVRGQHTKSTGR 142 >gi|149940233|emb|CAM32184.1| ribosomal protein S18 [Sparus aurata] Length = 132 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 24/119 (20%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQAIEQDYQV--- 66 +++ A+ I G+G + + + K I +R +L + EV + I Q Q Y++ Sbjct: 4 RKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERAVTIMQNPRQ-YKIPDW 62 Query: 67 ---------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 +G + +A +++RL + +RGLRH GL VRGQ T T R Sbjct: 63 FLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 121 >gi|238597051|ref|XP_002394222.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553] gi|215462901|gb|EEB95152.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553] Length = 79 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 14/84 (16%) Query: 39 IPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +PP R+ +V+ + QI + D ++ DL +RL + +RGLRH GL V Sbjct: 9 VPPARK--NIVDGKDYQI-LSTNVDSKLRDDL--------ERLKKIRAHRGLRHFWGLRV 57 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 58 RGQHTKTTGRRGKTV---GVSKKR 78 >gi|311261966|ref|XP_003128953.1| PREDICTED: 40S ribosomal protein S18-like [Sus scrofa] Length = 200 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ I +++ A I G+G + + + K I +R +L E EV I I Sbjct: 60 ILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIM 119 Query: 58 QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH GL Sbjct: 120 QNPGQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLR 178 Query: 98 VRGQRTHTNAR 108 V GQ T T R Sbjct: 179 VGGQHTKTTGR 189 >gi|270261413|ref|ZP_06189686.1| indigoidine synthase A like protein [Serratia odorifera 4Rx13] gi|270044897|gb|EFA17988.1| indigoidine synthase A like protein [Serratia odorifera 4Rx13] Length = 312 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 9/107 (8%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G N+ + R R L +I G + + + + I +H + + + EQ + Sbjct: 88 GHNVAKVSR--RDLPFIVAAGKHGATTVASTMIIAEMAGIHVFATGGIGGVHRGAEQTFD 145 Query: 66 VEGDLRRTVAMNI-------KRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + DL+ N+ K ++DLG G+P+ G RT T Sbjct: 146 ISADLQELARTNVAVICAGAKSILDLGLTTEYLETHGVPLIGYRTQT 192 >gi|218884677|ref|YP_002429059.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n] gi|218766293|gb|ACL11692.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n] Length = 174 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ +V L + G+G+ S IC L + PE+RV L + V I + + Sbjct: 22 IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81 Query: 61 ---------------EQDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY +L T V +I+R + +RG+RH GL V Sbjct: 82 RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141 Query: 99 RG 100 RG Sbjct: 142 RG 143 >gi|1086185|pir||S51064 ribosomal protein S13 - Thermus aquaticus (fragment) Length = 24 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/24 (75%), Positives = 19/24 (79%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGI 25 ARIAGV IPR KRV AL YI+GI Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGI 24 >gi|114669049|ref|XP_511822.2| PREDICTED: similar to ribosomal protein [Pan troglodytes] Length = 152 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++ A+ I G+G + + + K I +R +L+E EV ++ Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELIEDEVERVVTIM 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + +RGL H GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYNQVLANGLDNELREDLERLKKIRAHRGLSHFWGLRV 131 Query: 99 RGQRTHTNA 107 RG+ T T Sbjct: 132 RGRHTKTTG 140 >gi|224980450|gb|ACN73088.1| COSII_At5g14320 [Solanum dulcamara] Length = 83 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54 R+ GV +P KRV +L YIHGIG S++ I L + E +V + L E E+I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDLSEEELI 83 >gi|262192754|gb|ACY30447.1| RPS18.A-like protein [Liriodendron tulipifera] Length = 197 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 22/139 (15%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----------NKLAIPPERRVHQLVES- 51 R+ N+ ++++ AL I GIG + + +C +L+ + +V + Sbjct: 62 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKGRRRHEQEAGELSAAELENLMVIVANP 121 Query: 52 EVIQIRQAIEQDYQVEGDLRRTV---AMNIKRLMDLGC-----YRGLRHRRGLPVRGQRT 103 + + + EQ+ ++G V A+++K D +RGLRH GL VRGQ T Sbjct: 122 DSSRFQTGFEQEEGLQGWRYSQVVSNALDMKLRDDWTTEEDQDHRGLRHYWGLRVRGQHT 181 Query: 104 HTNARTRKKFGKGGVARKR 122 T R K GV++KR Sbjct: 182 KTTGRRGKTV---GVSKKR 197 >gi|148709378|gb|EDL41324.1| mCG121998 [Mus musculus] Length = 134 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 22/129 (17%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE------ 61 NI +++ A+ I G+G + + + K I +R +L E EV ++ ++ Sbjct: 1 NINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYS 60 Query: 62 --------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 Q Y +G + +A +++RL + +R L H GL VRGQ T T Sbjct: 61 IPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQHTKT 120 Query: 106 NARTRKKFG 114 R + G Sbjct: 121 TGRRGRTMG 129 >gi|224980452|gb|ACN73089.1| COSII_At5g14320 [Datura inoxia] Length = 83 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54 R+ GV +P KRV +L YIHGIG S++ I L + E +V + L E E+I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDLSEEELI 83 >gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 27/41 (65%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 +I GIG S +IC + + PER++++L EV+ + Q+I+ Sbjct: 161 FISGIGNLYSDEICYEARLLPERKMNELSTQEVLDLFQSIQ 201 >gi|109126207|ref|XP_001091975.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] Length = 149 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 22/131 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + R+ NI ++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLT 71 Query: 57 ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98 RQ D+ + +G + +A +++RL + RGL H GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAPRGLCHFWGLRV 131 Query: 99 RGQRTHTNART 109 RGQ T T T Sbjct: 132 RGQHTKTTGLT 142 >gi|317494288|ref|ZP_07952703.1| indigoidine synthase A like protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917743|gb|EFV39087.1| indigoidine synthase A like protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 312 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 9/106 (8%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G N+ + R R L +I G + + + + I +H + + + EQ + Sbjct: 88 GHNVAKVSR--RDLPFIVAAGKNGATTVASTMIIAEMAGIHVFATGGIGGVHRGAEQTFD 145 Query: 66 VEGDLRRTVAMNI-------KRLMDLGCYRGLRHRRGLPVRGQRTH 104 + DL+ N+ K ++DLG G+P+ G RT Sbjct: 146 ISADLQELAKTNVAVICAGAKSILDLGLTTEYLETHGVPLIGYRTQ 191 >gi|23464609|ref|NP_696977.1| ribosomal protein S13 [Monosiga brevicollis ATCC 50154] gi|23344072|gb|AAN28348.1| ribosomal protein S13 [Monosiga brevicollis] Length = 166 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 27/50 (54%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E +L + I L+ + RG R + G P +GQRT +NA T K+ K Sbjct: 112 IEENLNDYESSQINTLIQINALRGRRIKMGYPSKGQRTRSNAITAKRINK 161 >gi|62733753|gb|AAX95862.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|77549399|gb|ABA92196.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 332 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 7 VNIPRAKRVVRALCYIHGIGFKSSQ---DICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 V + AKR + LC+ + +K + ++ KL +PP+ +VH +V + +++AI D Sbjct: 219 VQMSVAKRSCQKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVVHVSL--LKKAIRPD 276 Query: 64 YQVEGDL 70 QV+ DL Sbjct: 277 VQVQADL 283 >gi|82952669|ref|XP_893065.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|94395028|ref|XP_001001941.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 186 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61 + NI +++ A+ I G+G + + + K I +R +L E EV ++ ++ Sbjct: 49 VLNTNINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNP 108 Query: 62 ------------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQ 101 Q Y +G + +A +++RL + +R L H GL VRGQ Sbjct: 109 RQYSIPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQ 168 Query: 102 RTHTNARTRKKFG 114 T T R + G Sbjct: 169 HTKTTGRRGRTMG 181 >gi|551831|gb|AAA83903.1| ribosomal protein S13 [Escherichia coli] gi|554544|gb|AAA72457.1| S13 protein (gtg start codon) [synthetic construct] Length = 36 Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 22/33 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 MARIAG+NIP K V AL I+G+G S+ I Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAI 33 >gi|156042836|ref|XP_001587975.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980] gi|154695602|gb|EDN95340.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980 UF-70] Length = 37 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 19/32 (59%) Query: 84 LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G YRG RH GLPVRGQ T T +K K Sbjct: 1 MGSYRGRRHAMGLPVRGQNTKGQISTARKLNK 32 >gi|342763|gb|AAA70291.1| ribosomal protein S13 [Oenothera berteroana] Length = 26 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 15/22 (68%), Positives = 19/22 (86%) Query: 91 RHRRGLPVRGQRTHTNARTRKK 112 RH+ G P+RGQR+HTNART +K Sbjct: 1 RHQDGSPLRGQRSHTNARTSRK 22 >gi|224980696|gb|ACN73211.1| COSII_At5g14320 [Solanum bulbocastanum] gi|224980700|gb|ACN73213.1| COSII_At5g14320 [Solanum trifidum] gi|224980702|gb|ACN73214.1| COSII_At5g14320 [Solanum polyadenium] Length = 83 Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54 R+ GV +P KRV +L YIHGIG S++ I L + E +V + + E E+I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDMSEEELI 83 >gi|224980706|gb|ACN73216.1| COSII_At5g14320 [Solanum andreanum] Length = 83 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54 R+ GV +P KRV +L YIHGIG S++ I L + E +V + + E E+I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDMSEEELI 83 >gi|7525003|ref|NP_050101.1| ribosomal protein S13 [Dictyostelium discoideum] gi|74833664|sp|O21038|RT13_DICDI RecName: Full=Ribosomal protein S13, mitochondrial gi|2627258|dbj|BAA23575.1| ribosomal protein S13 [Dictyostelium discoideum] gi|4958906|dbj|BAA78083.1| ribosomal protein S13 [Dictyostelium discoideum] Length = 169 Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%) Query: 22 IHGIGFKSSQDI---CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 I G+ F +Q + +A ++ Q E +++ I Q + Y L+ I Sbjct: 24 IKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVDILQRFKGLYSHNYGLKEEALAKI 83 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +R+ + YR +R R+G PVRG RT +NA T K+ Sbjct: 84 RRIEN--VYRYIRVRQGYPVRG-RTKSNANTVKR 114 >gi|301139496|gb|ADK66163.1| COSII_At5g14320 [Solanum pascoense] Length = 77 Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 66 >gi|301139216|gb|ADK66023.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139540|gb|ADK66185.1| COSII_At5g14320 [Solanum piurae] Length = 67 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 56 >gi|327186831|gb|AEA30820.1| hypothetical protein [Solanum agrimonifolium] Length = 73 Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|327186939|gb|AEA30874.1| hypothetical protein [Solanum hjertingii] gi|327186943|gb|AEA30876.1| hypothetical protein [Solanum hjertingii] gi|327186947|gb|AEA30878.1| hypothetical protein [Solanum hjertingii] gi|327186951|gb|AEA30880.1| hypothetical protein [Solanum hjertingii] gi|327186955|gb|AEA30882.1| hypothetical protein [Solanum hjertingii] gi|327186959|gb|AEA30884.1| hypothetical protein [Solanum hjertingii] gi|327187061|gb|AEA30935.1| hypothetical protein [Solanum schenckii] gi|327187067|gb|AEA30938.1| hypothetical protein [Solanum schenckii] gi|327187073|gb|AEA30941.1| hypothetical protein [Solanum schenckii] gi|327187079|gb|AEA30944.1| hypothetical protein [Solanum schenckii] gi|327187083|gb|AEA30946.1| hypothetical protein [Solanum schenckii] gi|327187089|gb|AEA30949.1| hypothetical protein [Solanum schenckii] gi|327187097|gb|AEA30953.1| hypothetical protein [Solanum stoloniferum] gi|327187101|gb|AEA30955.1| hypothetical protein [Solanum stoloniferum] gi|327187105|gb|AEA30957.1| hypothetical protein [Solanum stoloniferum] gi|327187109|gb|AEA30959.1| hypothetical protein [Solanum stoloniferum] gi|327187123|gb|AEA30966.1| hypothetical protein [Solanum stoloniferum] gi|327187129|gb|AEA30969.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|320101541|ref|YP_004177133.1| 30S ribosomal protein S13P [Desulfurococcus mucosus DSM 2162] gi|319753893|gb|ADV65651.1| SSU ribosomal protein S13P [Desulfurococcus mucosus DSM 2162] Length = 162 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ +V L + G+G+ S +C L + P +R L + V I + + Sbjct: 10 IVRILETDVDGELPLVYGLSEVKGLGYAFSLAVCRVLGLDPRQRTGFLSDDTVKSIEEVV 69 Query: 61 E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY DL T V +I+R + +RG+RH GL V Sbjct: 70 RNPGKYGIPAWIYNRRKDYATGQDLHLTSANLIYYVKEDIEREKRIKSWRGIRHALGLKV 129 Query: 99 RG 100 RG Sbjct: 130 RG 131 >gi|327186963|gb|AEA30886.1| hypothetical protein [Solanum hougasii] Length = 73 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|301139212|gb|ADK66021.1| COSII_At5g14320 [Solanum chomatophilum] Length = 66 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 55 >gi|327186829|gb|AEA30819.1| hypothetical protein [Solanum agrimonifolium] gi|327186833|gb|AEA30821.1| hypothetical protein [Solanum agrimonifolium] gi|327186835|gb|AEA30822.1| hypothetical protein [Solanum agrimonifolium] gi|327186859|gb|AEA30834.1| hypothetical protein [Solanum albicans] gi|327186875|gb|AEA30842.1| hypothetical protein [Solanum chomatophilum] gi|327186887|gb|AEA30848.1| hypothetical protein [Solanum colombianum] gi|327186965|gb|AEA30887.1| hypothetical protein [Solanum hougasii] gi|327186971|gb|AEA30890.1| hypothetical protein [Solanum hougasii] gi|327186977|gb|AEA30893.1| hypothetical protein [Solanum hougasii] gi|327186983|gb|AEA30896.1| hypothetical protein [Solanum hougasii] gi|327186989|gb|AEA30899.1| hypothetical protein [Solanum hougasii] gi|327187001|gb|AEA30905.1| hypothetical protein [Solanum iopetalum] gi|327187007|gb|AEA30908.1| hypothetical protein [Solanum iopetalum] gi|327187013|gb|AEA30911.1| hypothetical protein [Solanum iopetalum] gi|327187025|gb|AEA30917.1| hypothetical protein [Solanum iopetalum] gi|327187043|gb|AEA30926.1| hypothetical protein [Solanum moscopanum] gi|327187045|gb|AEA30927.1| hypothetical protein [Solanum moscopanum] gi|327187049|gb|AEA30929.1| hypothetical protein [Solanum moscopanum] gi|327187051|gb|AEA30930.1| hypothetical protein [Solanum moscopanum] gi|327187055|gb|AEA30932.1| hypothetical protein [Solanum piurae] gi|327187063|gb|AEA30936.1| hypothetical protein [Solanum schenckii] gi|327187069|gb|AEA30939.1| hypothetical protein [Solanum schenckii] gi|327187085|gb|AEA30947.1| hypothetical protein [Solanum schenckii] gi|327187091|gb|AEA30950.1| hypothetical protein [Solanum schenckii] gi|327187125|gb|AEA30967.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|327186969|gb|AEA30889.1| hypothetical protein [Solanum hougasii] gi|327186975|gb|AEA30892.1| hypothetical protein [Solanum hougasii] gi|327186981|gb|AEA30895.1| hypothetical protein [Solanum hougasii] gi|327186987|gb|AEA30898.1| hypothetical protein [Solanum hougasii] Length = 73 Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|327186889|gb|AEA30849.1| hypothetical protein [Solanum cardiophyllum] Length = 68 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|327186873|gb|AEA30841.1| hypothetical protein [Solanum chomatophilum] Length = 57 Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 16 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 51 >gi|301139434|gb|ADK66132.1| COSII_At5g14320 [Solanum jalcae] Length = 74 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 28 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 63 >gi|327186933|gb|AEA30871.1| hypothetical protein [Solanum dulcamara] Length = 73 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|327186883|gb|AEA30846.1| hypothetical protein [Solanum colombianum] Length = 73 Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|301139172|gb|ADK66001.1| COSII_At5g14320 [Solanum andreanum] Length = 77 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 66 >gi|27671346|ref|XP_234780.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|109482109|ref|XP_001058023.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 24/131 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57 + R+ NI ++ A+ I G+G + + + K I +R +L E EV I I Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 58 QAIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLP 97 Q Q Y++ +G + +A +++RL + +RGLRH L Sbjct: 72 QNPRQ-YKIPDWFLDRQKDVKDGKYSQVLAKGLDNKLHEDLERLKKIRAHRGLRHFWDLR 130 Query: 98 VRGQRTHTNAR 108 V GQ + T R Sbjct: 131 VGGQHSKTTGR 141 >gi|301139574|gb|ADK66202.1| COSII_At5g14320 [Solanum tarnii] gi|301139576|gb|ADK66203.1| COSII_At5g14320 [Solanum tarnii] gi|301139578|gb|ADK66204.1| COSII_At5g14320 [Solanum tarnii] Length = 77 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 >gi|301139364|gb|ADK66097.1| COSII_At5g14320 [Solanum huancabambense] gi|301139366|gb|ADK66098.1| COSII_At5g14320 [Solanum huancabambense] gi|301139374|gb|ADK66102.1| COSII_At5g14320 [Solanum huancabambense] gi|301139376|gb|ADK66103.1| COSII_At5g14320 [Solanum huancabambense] Length = 77 Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 >gi|301139164|gb|ADK65997.1| COSII_At5g14320 [Solanum andreanum] gi|301139166|gb|ADK65998.1| COSII_At5g14320 [Solanum andreanum] gi|301139168|gb|ADK65999.1| COSII_At5g14320 [Solanum andreanum] gi|301139170|gb|ADK66000.1| COSII_At5g14320 [Solanum andreanum] gi|301139174|gb|ADK66002.1| COSII_At5g14320 [Solanum andreanum] gi|301139176|gb|ADK66003.1| COSII_At5g14320 [Solanum andreanum] gi|301139178|gb|ADK66004.1| COSII_At5g14320 [Solanum andreanum] gi|301139180|gb|ADK66005.1| COSII_At5g14320 [Solanum andreanum] gi|301139218|gb|ADK66024.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139220|gb|ADK66025.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139224|gb|ADK66027.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139226|gb|ADK66028.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139228|gb|ADK66029.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139234|gb|ADK66032.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139236|gb|ADK66033.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139238|gb|ADK66034.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139242|gb|ADK66036.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139244|gb|ADK66037.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139246|gb|ADK66038.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139254|gb|ADK66042.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139262|gb|ADK66046.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139264|gb|ADK66047.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139266|gb|ADK66048.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139362|gb|ADK66096.1| COSII_At5g14320 [Solanum huancabambense] gi|301139426|gb|ADK66128.1| COSII_At5g14320 [Solanum jalcae] gi|301139428|gb|ADK66129.1| COSII_At5g14320 [Solanum jalcae] gi|301139432|gb|ADK66131.1| COSII_At5g14320 [Solanum jalcae] gi|301139462|gb|ADK66146.1| COSII_At5g14320 [Solanum minutifoliolum] gi|301139472|gb|ADK66151.1| COSII_At5g14320 [Solanum marinasense] gi|301139500|gb|ADK66165.1| COSII_At5g14320 [Solanum paucijugum] gi|301139502|gb|ADK66166.1| COSII_At5g14320 [Solanum paucijugum] gi|301139504|gb|ADK66167.1| COSII_At5g14320 [Solanum paucijugum] gi|301139506|gb|ADK66168.1| COSII_At5g14320 [Solanum paucijugum] gi|301139508|gb|ADK66169.1| COSII_At5g14320 [Solanum paucijugum] gi|301139512|gb|ADK66171.1| COSII_At5g14320 [Solanum paucijugum] gi|301139514|gb|ADK66172.1| COSII_At5g14320 [Solanum paucijugum] gi|301139518|gb|ADK66174.1| COSII_At5g14320 [Solanum paucissectum] gi|301139520|gb|ADK66175.1| COSII_At5g14320 [Solanum paucissectum] gi|301139536|gb|ADK66183.1| COSII_At5g14320 [Solanum piurae] gi|301139542|gb|ADK66186.1| COSII_At5g14320 [Solanum piurae] gi|301139566|gb|ADK66198.1| COSII_At5g14320 [Solanum solisii] gi|301139584|gb|ADK66207.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139586|gb|ADK66208.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139588|gb|ADK66209.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139590|gb|ADK66210.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139592|gb|ADK66211.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139594|gb|ADK66212.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139596|gb|ADK66213.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139598|gb|ADK66214.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139600|gb|ADK66215.1| COSII_At5g14320 [Solanum tuquerrense] Length = 77 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 >gi|326516128|dbj|BAJ88087.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 100 Score = 33.5 bits (75), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 +++RL + +RGLRH GL VRGQ T T R Sbjct: 58 DLERLKKIKAHRGLRHYWGLRVRGQHTKTTGR 89 >gi|158187718|gb|ABW23148.1| ribosomal protein rps18 [Arenicola marina] Length = 114 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 22/101 (21%) Query: 30 SQDICNKLAIPPERRVHQLVESEVIQI-------RQAIEQDY--------------QVEG 68 S +C K + +R +L + EV +I RQ D+ Q+ Sbjct: 3 SHVVCKKADVDTSKRAGELSDEEVEKIVTIMSNPRQYKIPDWFLNRQKDVKDGKFSQIMS 62 Query: 69 D-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + L + +++RL + +RGLRH GL VRGQ T T R Sbjct: 63 NVLDSKIREDLERLKKIRVHRGLRHYWGLRVRGQHTKTTGR 103 >gi|224980698|gb|ACN73212.1| COSII_At5g14320 [Solanum stenophyllidium] Length = 83 Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63 >gi|327187113|gb|AEA30961.1| hypothetical protein [Solanum stoloniferum] gi|327187137|gb|AEA30973.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 58 >gi|313509192|gb|ADR65906.1| hypothetical protein [Solanum agrimonifolium] gi|313509196|gb|ADR65908.1| hypothetical protein [Solanum agrimonifolium] gi|313509200|gb|ADR65910.1| hypothetical protein [Solanum agrimonifolium] gi|313509206|gb|ADR65913.1| hypothetical protein [Solanum colombianum] gi|313509212|gb|ADR65916.1| hypothetical protein [Solanum colombianum] gi|313509214|gb|ADR65917.1| hypothetical protein [Solanum colombianum] gi|313509220|gb|ADR65920.1| hypothetical protein [Solanum colombianum] gi|313509222|gb|ADR65921.1| hypothetical protein [Solanum colombianum] gi|313509226|gb|ADR65923.1| hypothetical protein [Solanum colombianum] gi|313509232|gb|ADR65926.1| hypothetical protein [Solanum colombianum] gi|313509234|gb|ADR65927.1| hypothetical protein [Solanum colombianum] gi|313509236|gb|ADR65928.1| hypothetical protein [Solanum colombianum] gi|313509240|gb|ADR65930.1| hypothetical protein [Solanum colombianum] gi|313509242|gb|ADR65931.1| hypothetical protein [Solanum colombianum] gi|313509246|gb|ADR65933.1| hypothetical protein [Solanum colombianum] gi|313509250|gb|ADR65935.1| hypothetical protein [Solanum colombianum] gi|313509254|gb|ADR65937.1| hypothetical protein [Solanum flahaultii] gi|313509256|gb|ADR65938.1| hypothetical protein [Solanum flahaultii] gi|313509258|gb|ADR65939.1| hypothetical protein [Solanum flahaultii] gi|313509264|gb|ADR65942.1| hypothetical protein [Solanum garcia-barrigae] gi|313509266|gb|ADR65943.1| hypothetical protein [Solanum lobbianum] gi|313509270|gb|ADR65945.1| hypothetical protein [Solanum longiconicum] gi|313509274|gb|ADR65947.1| hypothetical protein [Solanum longiconicum] gi|313509280|gb|ADR65950.1| hypothetical protein [Solanum longiconicum] gi|313509296|gb|ADR65958.1| hypothetical protein [Solanum moscopanum] gi|313509298|gb|ADR65959.1| hypothetical protein [Solanum moscopanum] gi|313509302|gb|ADR65961.1| hypothetical protein [Solanum moscopanum] gi|313509306|gb|ADR65963.1| hypothetical protein [Solanum moscopanum] gi|313509308|gb|ADR65964.1| hypothetical protein [Solanum moscopanum] gi|313509310|gb|ADR65965.1| hypothetical protein [Solanum moscopanum] gi|313509312|gb|ADR65966.1| hypothetical protein [Solanum moscopanum] gi|313509316|gb|ADR65968.1| hypothetical protein [Solanum moscopanum] gi|313509318|gb|ADR65969.1| hypothetical protein [Solanum moscopanum] gi|313509328|gb|ADR65974.1| hypothetical protein [Solanum orocense] gi|313509330|gb|ADR65975.1| hypothetical protein [Solanum otites] gi|313509332|gb|ADR65976.1| hypothetical protein [Solanum oxycarpum] gi|313509336|gb|ADR65978.1| hypothetical protein [Solanum oxycarpum] gi|313509340|gb|ADR65980.1| hypothetical protein [Solanum oxycarpum] gi|313509356|gb|ADR65988.1| hypothetical protein [Solanum sucubunense] gi|313509358|gb|ADR65989.1| hypothetical protein [Solanum sucubunense] gi|313509360|gb|ADR65990.1| hypothetical protein [Solanum tundalomense] gi|313509366|gb|ADR65993.1| hypothetical protein [Solanum tundalomense] gi|313509368|gb|ADR65994.1| hypothetical protein [Solanum tundalomense] gi|313509372|gb|ADR65996.1| hypothetical protein [Solanum tundalomense] gi|313509376|gb|ADR65998.1| hypothetical protein [Solanum tundalomense] gi|313509378|gb|ADR65999.1| hypothetical protein [Solanum tundalomense] gi|313509420|gb|ADR66020.1| hypothetical protein [Solanum woodsonii] Length = 78 Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63 >gi|301139260|gb|ADK66045.1| COSII_At5g14320 [Solanum chomatophilum] Length = 75 Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 >gi|313509354|gb|ADR65987.1| hypothetical protein [Solanum sucubunense] Length = 78 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63 >gi|313509320|gb|ADR65970.1| hypothetical protein [Solanum moscopanum] gi|313509364|gb|ADR65992.1| hypothetical protein [Solanum tundalomense] Length = 78 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63 >gi|301139558|gb|ADK66194.1| COSII_At5g14320 [Solanum x sambucinum] Length = 77 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 >gi|301139200|gb|ADK66015.1| COSII_At5g14320 [Solanum stenophyllidium] gi|301139202|gb|ADK66016.1| COSII_At5g14320 [Solanum stenophyllidium] gi|301139570|gb|ADK66200.1| COSII_At5g14320 [Solanum stenophyllidium] Length = 77 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 16/32 (50%), Positives = 21/32 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33 R+ GV +P KRV +L YIHGIG S++ I Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62 Searching..................................................done Results from round 2 >gi|210611151|ref|ZP_03288765.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787] gi|210152138|gb|EEA83145.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787] Length = 178 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ R L + EV QI I Sbjct: 57 MARIAGVDLPRDKRVEIGLTYIYGIGRVSATKILEAAGVNPDTRCRDLTDEEVKQISAVI 116 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ YQVEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 117 DESYQVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 176 Query: 121 KR 122 K+ Sbjct: 177 KK 178 >gi|167036826|ref|YP_001664404.1| 30S ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039545|ref|YP_001662530.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X514] gi|256752657|ref|ZP_05493509.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1] gi|289579117|ref|YP_003477744.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9] gi|297545304|ref|YP_003677606.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|300915204|ref|ZP_07132519.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561] gi|307266989|ref|ZP_07548505.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1] gi|307725128|ref|YP_003904879.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513] gi|320115248|ref|YP_004185407.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|326390636|ref|ZP_08212191.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200] gi|226712796|sp|B0KCM5|RS13_THEP3 RecName: Full=30S ribosomal protein S13 gi|226712797|sp|B0K5R8|RS13_THEPX RecName: Full=30S ribosomal protein S13 gi|166853785|gb|ABY92194.1| ribosomal protein S13 [Thermoanaerobacter sp. X514] gi|166855660|gb|ABY94068.1| ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748477|gb|EEU61529.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1] gi|289528830|gb|ADD03182.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9] gi|296843079|gb|ADH61595.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|300888928|gb|EFK84075.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561] gi|306917974|gb|EFN48232.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1] gi|307582189|gb|ADN55588.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513] gi|319928339|gb|ADV79024.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|325993314|gb|EGD51751.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200] Length = 122 Score = 193 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S +I K + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEEEVSRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLR+ VAMNIKRLMD+GCYRG+RH+RGLPVRGQRT TNARTRK K + Sbjct: 61 DKEYKVEGDLRKEVAMNIKRLMDIGCYRGIRHKRGLPVRGQRTRTNARTRKGPRKTVAKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|20808635|ref|NP_623806.1| 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4] gi|32363349|sp|Q8R7X9|RS13_THETN RecName: Full=30S ribosomal protein S13 gi|20517269|gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4] Length = 122 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRSRSKEILAKAGVNPDTRVRDLTEDEVSKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEGDLR+ VAMNIKRL+D+GCYRG+RH+ GLPVRGQRT TNARTRK K + Sbjct: 61 EKEYKVEGDLRKEVAMNIKRLIDIGCYRGIRHKLGLPVRGQRTRTNARTRKGPRKTVAKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153812442|ref|ZP_01965110.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174] gi|149831367|gb|EDM86455.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174] Length = 194 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + +V +I I Sbjct: 73 MARIAGVDLPRDKRIEIGLTYIYGIGRTSADKILAQAGVNPDIRVRDLTDDDVKKISAVI 132 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 133 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 192 Query: 121 KR 122 K+ Sbjct: 193 KK 194 >gi|296131861|ref|YP_003639108.1| 30S ribosomal protein S13 [Thermincola sp. JR] gi|296030439|gb|ADG81207.1| 30S ribosomal protein S13 [Thermincola potens JR] Length = 123 Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG ++ I ++ + P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGRPTANQILSQTGVNPDTRVRDLTEEEVAKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNYKVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPAKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|296534009|ref|ZP_06896525.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957] gi|296265675|gb|EFH11784.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957] Length = 177 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ +L YI+GIG +++ IC +L IP +RRV+QL + E+++IR+ I Sbjct: 53 MARIAGVNIPTNKRVLISLRYIYGIGPANAKVICEQLGIPEDRRVNQLTDEEILKIRELI 112 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR AMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK + Sbjct: 113 DREYRVEGDLRRENAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGKAVAIAGK 172 Query: 121 KR 122 K+ Sbjct: 173 KK 174 >gi|258512645|ref|YP_003186079.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479371|gb|ACV59690.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 122 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P +RV L E EV+++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|288958719|ref|YP_003449060.1| small subunit ribosomal protein S13 [Azospirillum sp. B510] gi|288911027|dbj|BAI72516.1| small subunit ribosomal protein S13 [Azospirillum sp. B510] Length = 122 Score = 190 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YIHGIG +++IC KL IP ERRV++L + EV++IR+ I Sbjct: 1 MARIAGVNIPAQKRVEIGLTYIHGIGPFKAKEICAKLEIPAERRVNELTDDEVLKIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADYRVEGDLRREVAMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218289981|ref|ZP_03494158.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1] gi|218239966|gb|EED07153.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1] Length = 122 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P +RV L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254466762|ref|ZP_05080173.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I] gi|206687670|gb|EDZ48152.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I] Length = 122 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC+ + I P RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICDAVGIDPTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269792768|ref|YP_003317672.1| 30S ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100403|gb|ACZ19390.1| ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 125 Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +S+ I + P RR L + E +IR I Sbjct: 1 MARIAGVDLPREKRIEIALTYIYGIGLTTSRKILASTGVDPNRRTKDLTDEEAQRIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK K + Sbjct: 61 ENNYKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|110678752|ref|YP_681759.1| 30S ribosomal protein S13 [Roseobacter denitrificans OCh 114] gi|122972937|sp|Q16AC0|RS13_ROSDO RecName: Full=30S ribosomal protein S13 gi|109454868|gb|ABG31073.1| ribosomal protein S13 [Roseobacter denitrificans OCh 114] Length = 122 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I P RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|167771242|ref|ZP_02443295.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM 17241] gi|167666493|gb|EDS10623.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM 17241] Length = 122 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI GIG K++Q I + P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPKDKRVEIGLTYIFGIGRKTAQQILEATGVNPDTRVKDLTEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DHNVHVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83593998|ref|YP_427750.1| 30S ribosomal protein S13 [Rhodospirillum rubrum ATCC 11170] gi|91207722|sp|Q2RQY2|RS13_RHORT RecName: Full=30S ribosomal protein S13 gi|83576912|gb|ABC23463.1| SSU ribosomal protein S13P [Rhodospirillum rubrum ATCC 11170] Length = 122 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG + +IC + I RRV+ L + EV++IR+ I Sbjct: 1 MARIAGVNIPSNKRVCIALTYIYGIGRTKAGEICERTGIAENRRVNDLSDDEVVRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VAMNIKR+MDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DSEYKVEGDLRREVAMNIKRIMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325293314|ref|YP_004279178.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3] gi|325061167|gb|ADY64858.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3] Length = 122 Score = 189 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 104/122 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ +P ++RVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGLPADKRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319404403|emb|CBI78006.1| 30S ribosomal protein S13 [Bartonella rochalimae ATCC BAA-1498] Length = 122 Score = 189 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I K+ I PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIEKVGISPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159184981|ref|NP_354901.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58] gi|32363355|sp|Q8UE39|RS13_AGRT5 RecName: Full=30S ribosomal protein S13 gi|159140257|gb|AAK87686.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58] Length = 122 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 90/122 (73%), Positives = 104/122 (85%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ IP E+RVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGIPAEKRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|84499818|ref|ZP_00998106.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597] gi|84392962|gb|EAQ05173.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597] Length = 122 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+Q IC I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPSSAQSICEATGIDQTRRVNELSDAEVLTIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312880346|ref|ZP_07740146.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260] gi|310783637|gb|EFQ24035.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260] Length = 125 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG SS+ I + P+ R L + E +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLTSSKKILAATGVNPDTRTKDLTDEEAQRIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK + + Sbjct: 61 ENQFKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126737030|ref|ZP_01752765.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6] gi|126721615|gb|EBA18318.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6] Length = 122 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPTSAKAICEAVNIDETRRVNELSDAEVLSIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294101654|ref|YP_003553512.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261] gi|293616634|gb|ADE56788.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261] Length = 125 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 73/121 (60%), Positives = 87/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +S I I P+ RV L E E +IR+ I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLPTSHLILAATGINPDTRVKDLTEEEAQRIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V MNIKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK + + Sbjct: 61 QEHYKVEGDLRREVTMNIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRKGPRRTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|260432470|ref|ZP_05786441.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157] gi|260416298|gb|EEX09557.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157] Length = 122 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKKICEAVGIDESRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|51894185|ref|YP_076876.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863] gi|81387945|sp|Q67JW8|RS13_SYMTH RecName: Full=30S ribosomal protein S13 gi|51857874|dbj|BAD42032.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863] Length = 124 Score = 188 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG+ S++I K I P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEAALPYIYGIGWSLSREILKKTGIDPDTRVRDLTEEQVAKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDL+R V MNIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DHEYKVEGDLQREVQMNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|217967393|ref|YP_002352899.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724] gi|226712734|sp|B8E1F7|RS13_DICTD RecName: Full=30S ribosomal protein S13 gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724] Length = 124 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V AL YI+GIG +S+ I + P +RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPSNKKVEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT NARTRK K A+ Sbjct: 61 ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRKGPRKTVGAK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|325294421|ref|YP_004280935.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064869|gb|ADY72876.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 126 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K+V +L YI+GIG K+ IC + I PE+RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPDNKKVPYSLAYIYGIGIKTGFKICEEAGIDPEKRVKDLTEEEIAKIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLR+ +AMNIKRLM++GCYRG+RHR GLPVRGQRT TNARTRK K + Sbjct: 61 ETEYKVEGDLRKEIAMNIKRLMEIGCYRGIRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|237815630|ref|ZP_04594627.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A] gi|237788928|gb|EEP63139.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A] Length = 175 Score = 188 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 98/121 (80%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI+ Sbjct: 55 ARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAID 114 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K Sbjct: 115 ADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGKK 174 Query: 122 R 122 + Sbjct: 175 K 175 >gi|302669988|ref|YP_003829948.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316] gi|302394461|gb|ADL33366.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316] Length = 157 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + P+ RV L + EV +I + I Sbjct: 36 MARIAGVDLPRDKRVEIGLTYIYGIGRTSSNKILEAAKVNPDTRVRDLTDDEVKKIAEII 95 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 DY VEGDLRR VAMNIKRL ++GC+RG+RHRRGLP RGQRT TNARTRK + + Sbjct: 96 GNDYDVEGDLRREVAMNIKRLTEIGCFRGMRHRRGLPCRGQRTKTNARTRKGPKRTIANK 155 Query: 121 KR 122 K+ Sbjct: 156 KK 157 >gi|325288602|ref|YP_004264783.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271] gi|324964003|gb|ADY54782.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271] Length = 122 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV AL YI+GIG S+ I K + P+ RV L + EV +IR+ I Sbjct: 1 MARISGVDIPRDKRVEIALTYIYGIGNSQSKKILEKTQVSPDTRVRDLTDDEVARIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKEYMVEGDLRREVSLNIKRLMEIGCYRGMRHRRGLPVRGQRTKTNARTRKGPARAIARK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114767224|ref|ZP_01446089.1| 30S ribosomal protein S13 [Pelagibaca bermudensis HTCC2601] gi|114540634|gb|EAU43705.1| 30S ribosomal protein S13 [Roseovarius sp. HTCC2601] Length = 122 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+Q IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHTSAQQICEAVNIDATRRVNELSDTEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114567815|ref|YP_754969.1| 30S ribosomal protein S13 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317307|sp|Q0AUK6|RS13_SYNWW RecName: Full=30S ribosomal protein S13 gi|114338750|gb|ABI69598.1| SSU ribosomal protein S13P [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 122 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI GIG SS+ I I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEVSLTYIFGIGRSSSRKILTDAGINPDTRVKDLTEEEVSKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y VEGDLRR V M+IKRLMDLGCYRG+RHRRGLPVRGQ T TNARTRK + + Sbjct: 61 EKEYHVEGDLRRQVNMDIKRLMDLGCYRGIRHRRGLPVRGQNTKTNARTRKGPKRTAGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|161611321|ref|YP_162274.2| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761082|ref|ZP_04759171.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752952|ref|YP_003225845.1| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|91207635|sp|Q5NQ42|RS13_ZYMMO RecName: Full=30S ribosomal protein S13 gi|241374701|gb|EER64162.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552315|gb|ACV75261.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775271|gb|AAV89163.2| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4] Length = 122 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++ I KL I PERRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|328951211|ref|YP_004368546.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884] gi|328451535|gb|AEB12436.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884] Length = 126 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG ++ I P RV L + EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVEIALTYIYGIGRTRAKQALEATGIDPSVRVKDLSDQEVVKLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTWKLEGELRAEVQANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319407403|emb|CBI81054.1| 30S ribosomal protein S13 [Bartonella sp. 1-1C] Length = 122 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I ++ I PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGISPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154253199|ref|YP_001414023.1| 30S ribosomal protein S13 [Parvibaculum lavamentivorans DS-1] gi|171769644|sp|A7HWT3|RS13_PARL1 RecName: Full=30S ribosomal protein S13 gi|154157149|gb|ABS64366.1| ribosomal protein S13 [Parvibaculum lavamentivorans DS-1] Length = 122 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG +++IC + IP ERRV++L ++EVIQIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALTYIHGIGNTKAKEICGTVGIPAERRVNELTDAEVIQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|190891377|ref|YP_001977919.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652] gi|226712781|sp|B3PWU3|RS13_RHIE6 RecName: Full=30S ribosomal protein S13 gi|190696656|gb|ACE90741.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652] Length = 122 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260426999|ref|ZP_05780978.1| 30S ribosomal protein S13 [Citreicella sp. SE45] gi|260421491|gb|EEX14742.1| 30S ribosomal protein S13 [Citreicella sp. SE45] Length = 122 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+Q IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHTSAQAICEAVNIEASRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255283708|ref|ZP_05348263.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469] gi|255265773|gb|EET58978.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469] Length = 122 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +IR + Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRTSSNKILEAAGVNPDTRVRDLTDEEVSKIRDVM 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 DEHYTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|144900906|emb|CAM77770.1| 30S ribosomal protein S13 [Magnetospirillum gryphiswaldense MSR-1] Length = 125 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI GIG + +IC KL+IP ERRV+QL + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALTYITGIGRTKAAEICTKLSIPAERRVNQLTDDEVLKIREMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DSDYTVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|326203870|ref|ZP_08193732.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782] gi|325985968|gb|EGD46802.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782] Length = 122 Score = 187 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S +I K + P+ RV L + E+ +IR+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRPKSNEILVKTGVSPDTRVRDLTDDEINKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR +A+NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK K + Sbjct: 61 DKEYKVEGDLRREIALNIKRLIEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPSKPVSGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|303230139|ref|ZP_07316908.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a] gi|303231267|ref|ZP_07318005.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6] gi|302514174|gb|EFL56178.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6] gi|302515200|gb|EFL57173.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a] Length = 122 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLADEILAKTGINPDTRVRDLSEDEVAKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK K + Sbjct: 61 DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|206900392|ref|YP_002250725.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12] gi|226712733|sp|B5YDW7|RS13_DICT6 RecName: Full=30S ribosomal protein S13 gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12] Length = 124 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG +S+ I + P +RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPSNKKIEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT NARTRK K A+ Sbjct: 61 ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRKGPRKTVGAK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|291544482|emb|CBL17591.1| SSU ribosomal protein S13P [Ruminococcus sp. 18P13] Length = 122 Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG ++ I + + P+ RV L ES+V +R I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIYGIGRNTAATILKETGVNPDTRVKDLTESDVALLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DKHYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|288574687|ref|ZP_06393044.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570428|gb|EFC91985.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 122 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI GIG +S+ I + P+ RV L E E ++R I Sbjct: 1 MARISGVDLPREKRVEIGLTYIFGIGLTTSKKILATTGVNPDTRVKDLTEEETQKLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V MNIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTRK + + Sbjct: 61 QNGYTVEGDLRREVTMNIKRLMDIGCYRGIRHRQGLPLRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|268609567|ref|ZP_06143294.1| 30S ribosomal protein S13 [Ruminococcus flavefaciens FD-1] Length = 122 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +++ +I + P+ RV L E +V ++R I Sbjct: 1 MARIAGVDLPKNKRIEIGLTYIYGIGRQTATNILANTGVNPDTRVKDLAEEDVAKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DANYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86357327|ref|YP_469219.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42] gi|123512263|sp|Q2K9J4|RS13_RHIEC RecName: Full=30S ribosomal protein S13 gi|86281429|gb|ABC90492.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42] Length = 122 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 91/122 (74%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|220928233|ref|YP_002505142.1| 30S ribosomal protein S13 [Clostridium cellulolyticum H10] gi|254811141|sp|B8I805|RS13_CLOCE RecName: Full=30S ribosomal protein S13 gi|219998561|gb|ACL75162.1| ribosomal protein S13 [Clostridium cellulolyticum H10] Length = 122 Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K + P+ RV L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIYGIGRPKANEILVKTGVNPDTRVRDLTDDEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR +A+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK K + Sbjct: 61 DKEYKVEGDLRREIALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPSKPVSGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153009308|ref|YP_001370523.1| 30S ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188] gi|239832100|ref|ZP_04680429.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301] gi|166231914|sp|A6X0E0|RS13_OCHA4 RecName: Full=30S ribosomal protein S13 gi|151561196|gb|ABS14694.1| ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188] gi|239824367|gb|EEQ95935.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301] Length = 122 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114800366|ref|YP_761507.1| 30S ribosomal protein S13 [Hyphomonas neptunium ATCC 15444] gi|123027743|sp|Q0BYD6|RS13_HYPNA RecName: Full=30S ribosomal protein S13 gi|114740540|gb|ABI78665.1| ribosomal protein S13 [Hyphomonas neptunium ATCC 15444] Length = 122 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG S++IC K+ + P RRV+QL ++EVI+IR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALRYIHGIGPSFSKEICEKVGVEPSRRVNQLTDAEVIKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR +MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DAGYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRKKLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163760822|ref|ZP_02167901.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43] gi|162281866|gb|EDQ32158.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43] Length = 126 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 5 MARIAGVNIPTNKRVIIALTYIHGIGNKFAAEIVEKVGIPLDRRVNQLSDAEVLQIRETI 64 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 65 DRDYQVEGDLRRENSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 124 Query: 121 KR 122 K+ Sbjct: 125 KK 126 >gi|126728201|ref|ZP_01744017.1| 30S ribosomal protein S13 [Sagittula stellata E-37] gi|126711166|gb|EBA10216.1| 30S ribosomal protein S13 [Sagittula stellata E-37] Length = 122 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGHTSARAICEAVGIDATRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|310816988|ref|YP_003964952.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25] gi|308755723|gb|ADO43652.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25] Length = 122 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I P RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGPTSAEAICAAVGIEPTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V+MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVSMNIKRLMDLGAYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|56695423|ref|YP_165771.1| 30S ribosomal protein S13 [Ruegeria pomeroyi DSS-3] gi|81350693|sp|Q5LW34|RS13_SILPO RecName: Full=30S ribosomal protein S13 gi|56677160|gb|AAV93826.1| ribosomal protein S13 [Ruegeria pomeroyi DSS-3] Length = 122 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++E++ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEILAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYSVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222148388|ref|YP_002549345.1| 30S ribosomal protein S13 [Agrobacterium vitis S4] gi|254811121|sp|B9JVQ9|RS13_AGRVS RecName: Full=30S ribosomal protein S13 gi|221735376|gb|ACM36339.1| 30S ribosomal protein S13 [Agrobacterium vitis S4] Length = 122 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ + +RRVHQL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMEKVGLSADRRVHQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|209548957|ref|YP_002280874.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|218674113|ref|ZP_03523782.1| 30S ribosomal protein S13 [Rhizobium etli GR56] gi|218679851|ref|ZP_03527748.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 894] gi|226712782|sp|B5ZZ55|RS13_RHILW RecName: Full=30S ribosomal protein S13 gi|209534713|gb|ACI54648.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 122 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149915867|ref|ZP_01904391.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b] gi|149810190|gb|EDM70036.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b] Length = 122 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +KRV AL YI GIG S++ IC + I RRV++L ++E++ +R+ + Sbjct: 1 MARIAGVNIPTSKRVPIALTYITGIGHASAKAICEAVGIDQSRRVNELSDAELLAVREHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|116251562|ref|YP_767400.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. viciae 3841] gi|158706271|sp|Q1MIB9|RS13_RHIL3 RecName: Full=30S ribosomal protein S13 gi|115256210|emb|CAK07291.1| putative 30S ribosomal protein S13 (BS14) [Rhizobium leguminosarum bv. viciae 3841] Length = 122 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVAKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255262793|ref|ZP_05342135.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62] gi|255105128|gb|EET47802.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62] Length = 122 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL Y+ GIG S+Q IC + I P RRV++L ++EV+++R+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYVTGIGTTSAQKICEAVGIDPTRRVNELSDAEVLKVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENYTVEGDLRREATMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163739471|ref|ZP_02146881.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107] gi|163740264|ref|ZP_02147658.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10] gi|161386122|gb|EDQ10497.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10] gi|161387224|gb|EDQ11583.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107] Length = 122 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGTTSAEAICEAVGIDATRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83949765|ref|ZP_00958498.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM] gi|83837664|gb|EAP76960.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM] Length = 122 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTHKRVPIALTYITGIGNTSAKAICEAVGIDLTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYMVEGDLRRETQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319789263|ref|YP_004150896.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1] gi|317113765|gb|ADU96255.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1] Length = 126 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K+V +L YI+GIG KS IC K + PE+RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPDNKKVPYSLAYIYGIGIKSGFKICEKAGVDPEKRVKDLTEEEIAKIRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLR+ +AMNIKRL+++GCYRG+RHR GLPVRGQRT TNARTRK K + Sbjct: 61 ENEYKVEGDLRKEIAMNIKRLIEIGCYRGVRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319899077|ref|YP_004159170.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73] gi|319403041|emb|CBI76596.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73] Length = 122 Score = 186 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ + PERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGQKFAQEIVEKVGVSPERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291533604|emb|CBL06717.1| SSU ribosomal protein S13P [Megamonas hypermegale ART12/1] Length = 122 Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats. Identities = 69/121 (57%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG K+SQDI I P+ R L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGLKTSQDILAATGINPDTRARDLTEDEVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR +++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK K + + Sbjct: 61 DKNHLVEGDLRREISLNIKRLVEIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKTVMGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|256371240|ref|YP_003109064.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331] gi|256007824|gb|ACU53391.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331] Length = 125 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ + + P+ RV L + EV+ +R I Sbjct: 1 MARIAGVDIPREKRVEVALTYIYGIGPTLARQVLEATGVNPDTRVRNLTDEEVLALRSWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+ +VEGDLRR V NIKR + +GCY+G+RHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DQNLKVEGDLRREVDQNIKRKIQIGCYQGIRHRRGLPVRGQRTHTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|289523343|ref|ZP_06440197.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503035|gb|EFD24199.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 127 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG S++ I I P+ RV L E E+ ++++ I Sbjct: 1 MARIAGIDLPRDKRVEIALTYIYGIGLPSAKKILASTGISPDTRVKDLTEDEINKLQREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V NIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK + + Sbjct: 61 ENNHKVEGDLRREVNANIKRLIDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254294418|ref|YP_003060441.1| ribosomal protein S13 [Hirschia baltica ATCC 49814] gi|254042949|gb|ACT59744.1| ribosomal protein S13 [Hirschia baltica ATCC 49814] Length = 122 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +Q+IC+K+ I ERRV L ++EVIQ+R+AI Sbjct: 1 MARIAGVNIPTNKRVTIALRYIHGIGPVKAQEICDKVGIAAERRVQDLSDAEVIQVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DADYVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|99080118|ref|YP_612272.1| 30S ribosomal protein S13 [Ruegeria sp. TM1040] gi|123379121|sp|Q1GK06|RS13_SILST RecName: Full=30S ribosomal protein S13 gi|99036398|gb|ABF63010.1| SSU ribosomal protein S13P [Ruegeria sp. TM1040] Length = 122 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|78043008|ref|YP_361093.1| 30S ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901] gi|91207693|sp|Q3A9U1|RS13_CARHZ RecName: Full=30S ribosomal protein S13 gi|77995123|gb|ABB14022.1| ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901] Length = 123 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 74/123 (60%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I K I P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 E++Y+VEG+LRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK + GV Sbjct: 61 EKNYKVEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNARTRKGPRRTVGVK 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|254474763|ref|ZP_05088149.1| ribosomal protein S13p/S18e [Ruegeria sp. R11] gi|214029006|gb|EEB69841.1| ribosomal protein S13p/S18e [Ruegeria sp. R11] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGSTSAEAICEAVGIDRTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|110634008|ref|YP_674216.1| 30S ribosomal protein S13 [Mesorhizobium sp. BNC1] gi|123162300|sp|Q11HS4|RS13_MESSB RecName: Full=30S ribosomal protein S13 gi|110284992|gb|ABG63051.1| SSU ribosomal protein S13P [Chelativorans sp. BNC1] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I +K+ IP +RRVHQL ++EV+ IR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|328543380|ref|YP_004303489.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1] gi|326413125|gb|ADZ70188.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I +K+ I PERRV+QL +SEV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKFAQEIIDKVNIAPERRVNQLSDSEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|85706697|ref|ZP_01037789.1| 30S ribosomal protein S13 [Roseovarius sp. 217] gi|85668755|gb|EAQ23624.1| 30S ribosomal protein S13 [Roseovarius sp. 217] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC L I RRV++L ++E + +R+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHSSAKSICEALNIDTSRRVNELSDAEALALREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRRESQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86135791|ref|ZP_01054370.1| ribosomal protein S13 [Roseobacter sp. MED193] gi|85826665|gb|EAQ46861.1| ribosomal protein S13 [Roseobacter sp. MED193] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPAAKRVPIALTYITGIGNTSAATICEAVGIDVTRRVNELSDAEVLSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254486500|ref|ZP_05099705.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101] gi|214043369|gb|EEB84007.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNSSAAQICEAVGIDTTRRINELSDAEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENFSVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|209964062|ref|YP_002296977.1| ribosomal protein S13 [Rhodospirillum centenum SW] gi|226712783|sp|B6IRS8|RS13_RHOCS RecName: Full=30S ribosomal protein S13 gi|209957528|gb|ACI98164.1| ribosomal protein S13 [Rhodospirillum centenum SW] Length = 122 Score = 185 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++IC K+ IP ERRVHQL + EV++IR+ I Sbjct: 1 MARIAGVNIPTQKRVEIALQYIHGIGAAKAKEICGKVGIPVERRVHQLTDDEVLRIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR VAMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DSDYKVEGDLRREVAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|313903126|ref|ZP_07836520.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965] gi|317123072|ref|YP_004103075.1| 30S ribosomal protein S13P [Thermaerobacter marianensis DSM 12885] gi|313466628|gb|EFR62148.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965] gi|315593052|gb|ADU52348.1| SSU ribosomal protein S13P [Thermaerobacter marianensis DSM 12885] Length = 126 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K + P+ RV L E E+ ++R I Sbjct: 1 MARIAGVDLPRDKRVEYALPYIYGIGLSRSREILAKAQVNPDTRVRDLTEDEINRLRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY+VEG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 ERDYKVEGELRSEVQRNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 KR Sbjct: 121 KR 122 >gi|119950852|gb|ABM09763.1| ribosomal protein S13p/S18e [Arthrobacter aurescens TC1] Length = 164 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L ++E++Q+R I Sbjct: 40 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 99 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK + + Sbjct: 100 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 159 Query: 121 KR 122 K+ Sbjct: 160 KK 161 >gi|158424156|ref|YP_001525448.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571] gi|158331045|dbj|BAF88530.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571] Length = 157 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 86/121 (71%), Positives = 99/121 (81%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRVV AL YIHGIG K +++I K+ I ERRV+QL ++EV+QIR+ I+ Sbjct: 37 ARIAGVNIPTNKRVVIALQYIHGIGPKKAEEIVEKVGIAAERRVNQLTDAEVLQIRETID 96 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 97 RDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 156 Query: 122 R 122 + Sbjct: 157 K 157 >gi|331091642|ref|ZP_08340476.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403399|gb|EGG82958.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ +I K + P+ R L + EV I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRVSANNILEKAGVNPDTRCRDLTDEEVKVISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++YQVEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 DENYQVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254719269|ref|ZP_05181080.1| 30S ribosomal protein S13 [Brucella sp. 83/13] gi|265984269|ref|ZP_06097004.1| ribosomal protein S13 [Brucella sp. 83/13] gi|306838020|ref|ZP_07470878.1| 30S ribosomal protein S13 [Brucella sp. NF 2653] gi|306840323|ref|ZP_07473095.1| 30S ribosomal protein S13 [Brucella sp. BO2] gi|306844114|ref|ZP_07476708.1| 30S ribosomal protein S13 [Brucella sp. BO1] gi|264662861|gb|EEZ33122.1| ribosomal protein S13 [Brucella sp. 83/13] gi|306275557|gb|EFM57289.1| 30S ribosomal protein S13 [Brucella sp. BO1] gi|306289722|gb|EFM60911.1| 30S ribosomal protein S13 [Brucella sp. BO2] gi|306406944|gb|EFM63165.1| 30S ribosomal protein S13 [Brucella sp. NF 2653] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|224370668|ref|YP_002604832.1| 30S ribosomal protein S13 [Desulfobacterium autotrophicum HRM2] gi|259494673|sp|C0Q9V0|RS13_DESAH RecName: Full=30S ribosomal protein S13 gi|223693385|gb|ACN16668.1| RpsM [Desulfobacterium autotrophicum HRM2] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K V AL YI+GIG SQ I K+ I P + L E +V IR+ I Sbjct: 1 MARIAGVDLPRNKHVEIALTYIYGIGRTRSQQILEKVGINPTLKSDALTEEQVNDIRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D++VEG+LR ++MNIKRLMDLGCYRGLRHR+ LP RGQRT TNARTRK + V + Sbjct: 61 DSDFKVEGELRTQISMNIKRLMDLGCYRGLRHRKSLPCRGQRTSTNARTRKGPKRAAVKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83941473|ref|ZP_00953935.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36] gi|83847293|gb|EAP85168.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|167629493|ref|YP_001679992.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1] gi|226712743|sp|B0TC82|RS13_HELMI RecName: Full=30S ribosomal protein S13 gi|167592233|gb|ABZ83981.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1] Length = 123 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI GIG ++ I + I P+ R L + EV ++R+ I Sbjct: 1 MARIAGIDLPRDKRIAIALTYIFGIGRPTADKILAETGINPDTRTRDLTDEEVARLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKNVEVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227821777|ref|YP_002825747.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234] gi|254811161|sp|C3MB01|RS13_RHISN RecName: Full=30S ribosomal protein S13 gi|227340776|gb|ACP24994.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K + +I K+ IP +RRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAHEIVEKVGIPTDRRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319405876|emb|CBI79508.1| 30S ribosomal protein S13 [Bartonella sp. AR 15-3] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG K +Q+I ++ IP ERRVH+L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGIPLERRVHELSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|323703523|ref|ZP_08115169.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574] gi|323531514|gb|EGB21407.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574] Length = 123 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR AL YI+GIG ++Q I + + P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRTEIALTYIYGIGRPTAQKILAQTGVNPDTRVKDLTEEEVNKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++ +VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNIKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|147676680|ref|YP_001210895.1| 30S ribosomal protein S13 [Pelotomaculum thermopropionicum SI] gi|189044284|sp|A5D5E5|RS13_PELTS RecName: Full=30S ribosomal protein S13 gi|146272777|dbj|BAF58526.1| ribosomal protein S13 [Pelotomaculum thermopropionicum SI] Length = 123 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 77/123 (62%), Positives = 95/123 (77%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +SQ I + + P+ RV L E E+ ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGKPTSQKILAQSGVNPDTRVRNLTEEEINKLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 E++Y+VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 EKNYKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|251799616|ref|YP_003014347.1| ribosomal protein S13 [Paenibacillus sp. JDR-2] gi|247547242|gb|ACT04261.1| ribosomal protein S13 [Paenibacillus sp. JDR-2] Length = 122 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI GIG +SQ I + P+ RV L E E+ ++R+AI Sbjct: 1 MARIAGVDIPRDKRVEIALTYIFGIGKTTSQKILASTGVNPDTRVRDLTEDELAKLREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218885210|ref|YP_002434531.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226712732|sp|B8DNK6|RS13_DESVM RecName: Full=30S ribosomal protein S13 gi|218756164|gb|ACL07063.1| ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + R + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTALQILDVTGVDWSRNIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQNHKVEGDLRREISSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|150396229|ref|YP_001326696.1| 30S ribosomal protein S13 [Sinorhizobium medicae WSM419] gi|166231926|sp|A6U881|RS13_SINMW RecName: Full=30S ribosomal protein S13 gi|150027744|gb|ABR59861.1| ribosomal protein S13 [Sinorhizobium medicae WSM419] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 90/122 (73%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238018648|ref|ZP_04599074.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748] gi|269798525|ref|YP_003312425.1| ribosomal protein S13 [Veillonella parvula DSM 2008] gi|282849889|ref|ZP_06259272.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745] gi|294792819|ref|ZP_06757966.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27] gi|294794573|ref|ZP_06759709.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44] gi|237865119|gb|EEP66409.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748] gi|269095154|gb|ACZ25145.1| ribosomal protein S13 [Veillonella parvula DSM 2008] gi|282580326|gb|EFB85726.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745] gi|294454903|gb|EFG23276.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44] gi|294456718|gb|EFG25081.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLASEIIAKTGINPDTRVRDLSEDEVAKIRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK K + Sbjct: 61 DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302344332|ref|YP_003808861.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075] gi|301640945|gb|ADK86267.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075] Length = 123 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG +S+ I + + P+ + L EV +IRQ I Sbjct: 1 MARIAGIDLPRNKRIEVALTYIYGIGPSTSKRILDAAGVNPDTKSDALNSEEVNRIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK + V + Sbjct: 61 DEAYKVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSRAVVGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|121534657|ref|ZP_01666478.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1] gi|121306677|gb|EAX47598.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I I P+ RV L E E+ ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTLSREILAATKINPDTRVRDLTEEEISKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR +NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK + + Sbjct: 61 DKNYKVEGDLRREEQLNIKRLIEIGCYRGKRHRAGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|17987062|ref|NP_539696.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|23502088|ref|NP_698215.1| 30S ribosomal protein S13 [Brucella suis 1330] gi|62290122|ref|YP_221915.1| 30S ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941] gi|82700045|ref|YP_414619.1| 30S ribosomal protein S13 [Brucella melitensis biovar Abortus 2308] gi|148560452|ref|YP_001259131.1| 30S ribosomal protein S13 [Brucella ovis ATCC 25840] gi|161619166|ref|YP_001593053.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365] gi|163843476|ref|YP_001627880.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445] gi|189024360|ref|YP_001935128.1| Ribosomal protein S13 [Brucella abortus S19] gi|225627682|ref|ZP_03785719.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo] gi|225852707|ref|YP_002732940.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457] gi|254689431|ref|ZP_05152685.1| 30S ribosomal protein S13 [Brucella abortus bv. 6 str. 870] gi|254693916|ref|ZP_05155744.1| 30S ribosomal protein S13 [Brucella abortus bv. 3 str. Tulya] gi|254697566|ref|ZP_05159394.1| 30S ribosomal protein S13 [Brucella abortus bv. 2 str. 86/8/59] gi|254701952|ref|ZP_05163780.1| 30S ribosomal protein S13 [Brucella suis bv. 5 str. 513] gi|254704496|ref|ZP_05166324.1| 30S ribosomal protein S13 [Brucella suis bv. 3 str. 686] gi|254706608|ref|ZP_05168436.1| 30S ribosomal protein S13 [Brucella pinnipedialis M163/99/10] gi|254710282|ref|ZP_05172093.1| 30S ribosomal protein S13 [Brucella pinnipedialis B2/94] gi|254730460|ref|ZP_05189038.1| 30S ribosomal protein S13 [Brucella abortus bv. 4 str. 292] gi|256031776|ref|ZP_05445390.1| 30S ribosomal protein S13 [Brucella pinnipedialis M292/94/1] gi|256044861|ref|ZP_05447765.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. Rev.1] gi|256061291|ref|ZP_05451441.1| 30S ribosomal protein S13 [Brucella neotomae 5K33] gi|256113765|ref|ZP_05454569.1| 30S ribosomal protein S13 [Brucella melitensis bv. 3 str. Ether] gi|256159946|ref|ZP_05457664.1| 30S ribosomal protein S13 [Brucella ceti M490/95/1] gi|256255177|ref|ZP_05460713.1| 30S ribosomal protein S13 [Brucella ceti B1/94] gi|256257677|ref|ZP_05463213.1| 30S ribosomal protein S13 [Brucella abortus bv. 9 str. C68] gi|256263802|ref|ZP_05466334.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9] gi|256369635|ref|YP_003107145.1| 30S ribosomal protein S13 [Brucella microti CCM 4915] gi|260168910|ref|ZP_05755721.1| 30S ribosomal protein S13 [Brucella sp. F5/99] gi|260546670|ref|ZP_05822409.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038] gi|260565537|ref|ZP_05836021.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|260566260|ref|ZP_05836730.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40] gi|260754954|ref|ZP_05867302.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870] gi|260758170|ref|ZP_05870518.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292] gi|260761996|ref|ZP_05874339.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59] gi|260883963|ref|ZP_05895577.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68] gi|261214208|ref|ZP_05928489.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya] gi|261222373|ref|ZP_05936654.1| SSU ribosomal protein S13P [Brucella ceti B1/94] gi|261314067|ref|ZP_05953264.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10] gi|261317845|ref|ZP_05957042.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94] gi|261325298|ref|ZP_05964495.1| SSU ribosomal protein S13P [Brucella neotomae 5K33] gi|261752520|ref|ZP_05996229.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513] gi|261755179|ref|ZP_05998888.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686] gi|261758403|ref|ZP_06002112.1| SSU ribosomal protein S13P [Brucella sp. F5/99] gi|265988874|ref|ZP_06101431.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1] gi|265991288|ref|ZP_06103845.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1] gi|265995125|ref|ZP_06107682.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether] gi|265998338|ref|ZP_06110895.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1] gi|294852546|ref|ZP_06793219.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026] gi|297248517|ref|ZP_06932235.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196] gi|54039348|sp|P66382|RS13_BRUSU RecName: Full=30S ribosomal protein S13 gi|54042120|sp|P66381|RS13_BRUME RecName: Full=30S ribosomal protein S13 gi|75496693|sp|Q57CT0|RS13_BRUAB RecName: Full=30S ribosomal protein S13 gi|91207690|sp|Q2YRT8|RS13_BRUA2 RecName: Full=30S ribosomal protein S13 gi|158706216|sp|A5VQY4|RS13_BRUO2 RecName: Full=30S ribosomal protein S13 gi|189040492|sp|A9M5M7|RS13_BRUC2 RecName: Full=30S ribosomal protein S13 gi|189040493|sp|B0CH09|RS13_BRUSI RecName: Full=30S ribosomal protein S13 gi|226712703|sp|B2S657|RS13_BRUA1 RecName: Full=30S ribosomal protein S13 gi|254811133|sp|C0RJH8|RS13_BRUMB RecName: Full=30S ribosomal protein S13 gi|17982719|gb|AAL51960.1| ssu ribosomal protein s13p [Brucella melitensis bv. 1 str. 16M] gi|23348047|gb|AAN30130.1| ribosomal protein S13 [Brucella suis 1330] gi|62196254|gb|AAX74554.1| RpsM, ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941] gi|82616146|emb|CAJ11189.1| Ribosomal protein S13 [Brucella melitensis biovar Abortus 2308] gi|148371709|gb|ABQ61688.1| ribosomal protein S13 [Brucella ovis ATCC 25840] gi|161335977|gb|ABX62282.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365] gi|163674199|gb|ABY38310.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445] gi|189019932|gb|ACD72654.1| Ribosomal protein S13 [Brucella abortus S19] gi|225617687|gb|EEH14732.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo] gi|225641072|gb|ACO00986.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457] gi|255999797|gb|ACU48196.1| 30S ribosomal protein S13 [Brucella microti CCM 4915] gi|260095720|gb|EEW79597.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038] gi|260151605|gb|EEW86699.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M] gi|260155778|gb|EEW90858.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40] gi|260668488|gb|EEX55428.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292] gi|260672428|gb|EEX59249.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59] gi|260675062|gb|EEX61883.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870] gi|260873491|gb|EEX80560.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68] gi|260915815|gb|EEX82676.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya] gi|260920957|gb|EEX87610.1| SSU ribosomal protein S13P [Brucella ceti B1/94] gi|261297068|gb|EEY00565.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94] gi|261301278|gb|EEY04775.1| SSU ribosomal protein S13P [Brucella neotomae 5K33] gi|261303093|gb|EEY06590.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10] gi|261738387|gb|EEY26383.1| SSU ribosomal protein S13P [Brucella sp. F5/99] gi|261742273|gb|EEY30199.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513] gi|261744932|gb|EEY32858.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686] gi|262552806|gb|EEZ08796.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1] gi|262766238|gb|EEZ12027.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether] gi|263002072|gb|EEZ14647.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1] gi|263093930|gb|EEZ17864.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9] gi|264661071|gb|EEZ31332.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1] gi|294821135|gb|EFG38134.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026] gi|297175686|gb|EFH35033.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196] gi|326409232|gb|ADZ66297.1| Ribosomal protein S13 [Brucella melitensis M28] gi|326538940|gb|ADZ87155.1| 30S ribosomal protein S13 [Brucella melitensis M5-90] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83858544|ref|ZP_00952066.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633] gi|83853367|gb|EAP91219.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 83/122 (68%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG + +IC K+ IP E+RV QL ++E++QIR+AI Sbjct: 1 MARIAGVNIPTNKRVTIALRYIHGIGPAMAAEICEKVGIPAEKRVSQLTDAEILQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR VA+N+KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DAGYTVEGDLRREVAVNVKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319408743|emb|CBI82400.1| 30S ribosomal protein S13 [Bartonella schoenbuchensis R1] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I K+ IP ERRVH+L+++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGRKFAQEIVEKVGIPSERRVHELLDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89053106|ref|YP_508557.1| 30S ribosomal protein S13 [Jannaschia sp. CCS1] gi|122499557|sp|Q28UT0|RS13_JANSC RecName: Full=30S ribosomal protein S13 gi|88862655|gb|ABD53532.1| SSU ribosomal protein S13P [Jannaschia sp. CCS1] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL Y+ GIG S+ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYVTGIGHTSAAAICEAVGIDVTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYAVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|259416113|ref|ZP_05740033.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B] gi|259347552|gb|EEW59329.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDVTRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DATFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str. psy62] gi|254039916|gb|ACT56712.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str. psy62] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 122/122 (100%), Positives = 122/122 (100%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI Sbjct: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR Sbjct: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Query: 121 KR 122 KR Sbjct: 121 KR 122 >gi|162139937|ref|YP_001261831.2| 30S ribosomal protein S13 [Sphingomonas wittichii RW1] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 83/122 (68%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++I KL I P+RRV L + EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|187933579|ref|YP_001884499.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B] gi|188589031|ref|YP_001919698.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska E43] gi|251779722|ref|ZP_04822642.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226712717|sp|B2UYD6|RS13_CLOBA RecName: Full=30S ribosomal protein S13 gi|226712718|sp|B2TIK1|RS13_CLOBB RecName: Full=30S ribosomal protein S13 gi|187721732|gb|ACD22953.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B] gi|188499312|gb|ACD52448.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska E43] gi|243084037|gb|EES49927.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 122 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +SQ I + I P+ RV L E EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLSTSQKILSTTGISPDARVKDLSEDEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTMANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|241204187|ref|YP_002975283.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858077|gb|ACS55744.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 122 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 92/122 (75%), Positives = 103/122 (84%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGSKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|292669834|ref|ZP_06603260.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541] gi|292648631|gb|EFF66603.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG ++Q I + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEISLTYIYGIGLTTAQKILAIADVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154505144|ref|ZP_02041882.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149] gi|153794623|gb|EDN77043.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149] Length = 159 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L + +V +I + I Sbjct: 38 MARIAGVDLPRDKRVEIGLTYIYGIGKTSAIRILADAGVDPDTRVRDLTQDDVKKISEVI 97 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 98 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 157 Query: 121 KR 122 K+ Sbjct: 158 KK 159 >gi|94985943|ref|YP_605307.1| 30S ribosomal protein S13 [Deinococcus geothermalis DSM 11300] gi|158706226|sp|Q1IX96|RS13_DEIGD RecName: Full=30S ribosomal protein S13 gi|94556224|gb|ABF46138.1| ribosomal protein S13 [Deinococcus geothermalis DSM 11300] Length = 126 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++++ + + P+ RV L E+E +R+AI Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGLTRAKEVLARTGVNPDTRVKNLSETEQSALREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|197117347|ref|YP_002137774.1| 30S ribosomal protein S13 [Geobacter bemidjiensis Bem] gi|253701898|ref|YP_003023087.1| 30S ribosomal protein S13 [Geobacter sp. M21] gi|226712741|sp|B5EFS4|RS13_GEOBB RecName: Full=30S ribosomal protein S13 gi|259494680|sp|C6E4N3|RS13_GEOSM RecName: Full=30S ribosomal protein S13 gi|197086707|gb|ACH37978.1| ribosomal protein S13 [Geobacter bemidjiensis Bem] gi|251776748|gb|ACT19329.1| ribosomal protein S13 [Geobacter sp. M21] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ+I + R L E+EV +IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTAAGVDMNTRCDNLTEAEVTKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK + + Sbjct: 61 DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|13470573|ref|NP_102142.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099] gi|260468532|ref|ZP_05813699.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075] gi|32363384|sp|Q98N35|RS13_RHILO RecName: Full=30S ribosomal protein S13 gi|14021315|dbj|BAB47928.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099] gi|259028688|gb|EEW29997.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I +K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGKKFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|116749014|ref|YP_845701.1| 30S ribosomal protein S13 [Syntrophobacter fumaroxidans MPOB] gi|158706289|sp|A0LIL4|RS13_SYNFM RecName: Full=30S ribosomal protein S13 gi|116698078|gb|ABK17266.1| SSU ribosomal protein S13P [Syntrophobacter fumaroxidans MPOB] Length = 124 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG ++Q I + I + L E+++ IR I Sbjct: 1 MARIAGIDLPKNKRIEIALTYIYGIGRPTAQKILEQANIDGNTKSDDLTENQINSIRHVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK + + + Sbjct: 61 DSHYKVEGDLRTEVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRSVMGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|125975410|ref|YP_001039320.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405] gi|256005303|ref|ZP_05430269.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360] gi|281419372|ref|ZP_06250387.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20] gi|158706224|sp|A3DJJ8|RS13_CLOTH RecName: Full=30S ribosomal protein S13 gi|125715635|gb|ABN54127.1| SSU ribosomal protein S13P [Clostridium thermocellum ATCC 27405] gi|255990739|gb|EEU00855.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360] gi|281406992|gb|EFB37255.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20] gi|316939526|gb|ADU73560.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313] Length = 123 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S +I K I P+ RV L + E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRTLSNEILRKTGINPDTRVKDLTDEEISKLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR +A+NIKRLM++GCYRG RHR GLPVRGQRT TNARTRK K GV Sbjct: 61 DKEYKVEGDLRREIALNIKRLMEIGCYRGRRHRAGLPVRGQRTKTNARTRKGPKKTVGVQ 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|90106929|gb|ABD88966.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB18] Length = 148 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 81/121 (66%), Positives = 96/121 (79%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV+ AL YIHGIG K++ +I K+ I ++RV+QL + EV+QIR+ I+ Sbjct: 28 ARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVID 87 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 88 RDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGKK 147 Query: 122 R 122 + Sbjct: 148 K 148 >gi|303328071|ref|ZP_07358510.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3] gi|302861897|gb|EFL84832.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + ER + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTALKILDSTGVNWERSIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQNFKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319783342|ref|YP_004142818.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169230|gb|ADV12768.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +Q+I +K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGKRFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163868628|ref|YP_001609837.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476] gi|189040491|sp|A9IVZ8|RS13_BART1 RecName: Full=30S ribosomal protein S13 gi|161018284|emb|CAK01842.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ IP RRVH+L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITEKVGIPTGRRVHELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148499439|gb|ABQ67693.1| SSU ribosomal protein S13P [Sphingomonas wittichii RW1] Length = 137 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 82/121 (67%), Positives = 93/121 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV AL YIHGIG +++I KL I P+RRV L + EV+QIR+AI+ Sbjct: 17 ARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAID 76 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K +K Sbjct: 77 AGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGKK 136 Query: 122 R 122 + Sbjct: 137 K 137 >gi|46579737|ref|YP_010545.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough] gi|120602786|ref|YP_967186.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris DP4] gi|81566848|sp|Q72CF7|RS13_DESVH RecName: Full=30S ribosomal protein S13 gi|158706227|sp|A1VE93|RS13_DESVV RecName: Full=30S ribosomal protein S13 gi|46449152|gb|AAS95804.1| ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough] gi|120563015|gb|ABM28759.1| SSU ribosomal protein S13P [Desulfovibrio vulgaris DP4] gi|311233528|gb|ADP86382.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris RCH1] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + R V L EV +IR+ I Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRATALQILDATGVNWTRNVDDLNADEVNEIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPVRGQRTHTNARTRK +G V + Sbjct: 61 EQNHKVEGDLRREISANIKRLMDIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRGTVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159042863|ref|YP_001531657.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12] gi|157910623|gb|ABV92056.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12] Length = 147 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 74/121 (61%), Positives = 89/121 (73%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVN+P KR AL YI GIG S+Q IC + I RR+++L ++E++ IR+ I+ Sbjct: 27 ARIAGVNLPTGKRTPIALTYITGIGLSSAQAICEAVGIEESRRLNELSDAEILAIREHID 86 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K Sbjct: 87 ANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 146 Query: 122 R 122 + Sbjct: 147 K 147 >gi|254470460|ref|ZP_05083864.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062] gi|211960771|gb|EEA95967.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062] Length = 122 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV AL YIHGIG K +Q+I +K+ I ERRV++L ++EV++IR+AI Sbjct: 1 MARIAGVNLPTNKRVVIALQYIHGIGAKFAQEITDKVGIAAERRVNELSDAEVLKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DAEYTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|163733785|ref|ZP_02141227.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149] gi|161392896|gb|EDQ17223.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149] Length = 145 Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 77/121 (63%), Positives = 93/121 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP AKRV AL YI GIG S++ IC + I P RRV++L ++EV+ +R+ I+ Sbjct: 25 ARIAGVNIPTAKRVPIALTYITGIGNNSAKQICEAVGIDPSRRVNELSDAEVLAVREHID 84 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K Sbjct: 85 ANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 144 Query: 122 R 122 + Sbjct: 145 K 145 >gi|134298118|ref|YP_001111614.1| 30S ribosomal protein S13 [Desulfotomaculum reducens MI-1] gi|172044236|sp|A4J136|RS13_DESRM RecName: Full=30S ribosomal protein S13 gi|134050818|gb|ABO48789.1| SSU ribosomal protein S13P [Desulfotomaculum reducens MI-1] Length = 123 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR AL YI+GIG ++Q I + + P+ R+ L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRAEIALTYIYGIGKPTAQKILAQTGVNPDTRIKDLTEEEVNKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK K AR Sbjct: 61 DKNTKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPKKTVGAR 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|89070530|ref|ZP_01157819.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516] gi|89043837|gb|EAR50035.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGPSSAKAICEAVNIDQTRRVNELSDAEVLSIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRRETQMNIKRLMDLGSYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225026388|ref|ZP_03715580.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353] gi|224956277|gb|EEG37486.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSADQILKAADVNPDTRVRDLTDDEVRRLSDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 DY VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 NADYTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83591250|ref|YP_431259.1| 30S ribosomal protein S13 [Moorella thermoacetica ATCC 39073] gi|123523769|sp|Q2RFS3|RS13_MOOTA RecName: Full=30S ribosomal protein S13 gi|83574164|gb|ABC20716.1| SSU ribosomal protein S13P [Moorella thermoacetica ATCC 39073] Length = 123 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S I + P+ RV L E EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEVALTYIYGIGRPKSNMILAATGVNPDTRVRDLTEDEVNRLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++ VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK + GV Sbjct: 61 DKNVVVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|15965131|ref|NP_385484.1| 30S ribosomal protein S13 [Sinorhizobium meliloti 1021] gi|307314381|ref|ZP_07593987.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C] gi|307322093|ref|ZP_07601469.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83] gi|32363377|sp|Q925X7|RS13_RHIME RecName: Full=30S ribosomal protein S13 gi|15074311|emb|CAC45957.1| Probable 30S ribosomal protein S13 [Sinorhizobium meliloti 1021] gi|16588800|gb|AAL26899.1| ribosomal protein S13 [Sinorhizobium meliloti] gi|306892275|gb|EFN23085.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83] gi|306899079|gb|EFN29721.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 90/122 (73%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIIEKVGIPAERRVHQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|320451276|ref|YP_004203372.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01] gi|320151445|gb|ADW22823.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01] Length = 126 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+G+G +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGVGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|304438386|ref|ZP_07398327.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368752|gb|EFM22436.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG +++ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAADVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260655359|ref|ZP_05860847.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1] gi|260629807|gb|EEX48001.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1] Length = 123 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 83/121 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S+ I + P+ RV L E E ++R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGVATSRKILETTGVNPDTRVKDLTEEEEQKLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR MNIKRL+D+GCYRGLRH++GLPVRGQRT TNART K + + Sbjct: 61 VNNHTVEGDLRRERTMNIKRLVDIGCYRGLRHKQGLPVRGQRTKTNARTCKGPRRTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|114778800|ref|ZP_01453607.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1] gi|114550931|gb|EAU53495.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG SS+ I I RV L + EV +IR I Sbjct: 1 MARIAGVNIPTQKRVEIALTYIYGIGHTSSKAILASAGIDVNTRVKDLSDGEVDKIRSLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V M+IKRL DLGCYRGLRHR+GLPVRGQR+ TNARTRK + + Sbjct: 61 DADYAVEGDLRREVTMSIKRLTDLGCYRGLRHRKGLPVRGQRSKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|78221870|ref|YP_383617.1| 30S ribosomal protein S13 [Geobacter metallireducens GS-15] gi|91207703|sp|Q39XY2|RS13_GEOMG RecName: Full=30S ribosomal protein S13 gi|78193125|gb|ABB30892.1| SSU ribosomal protein S13P [Geobacter metallireducens GS-15] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG ++Q I + + + R L E+EV +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRTTAQKILAESGVSVDTRTDSLTEAEVAKIREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 DKNIKVEGDLRRDVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|303240947|ref|ZP_07327458.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2] gi|302591533|gb|EFL61270.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2] Length = 123 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S I K + P+ RV L + E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRTLSNQILEKTGVNPDTRVRDLTDDEISKLRECI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR V++NIKRLM++GCYRG RHR GLP RGQRT TNARTRK + G Sbjct: 61 DKEYKVEGDLRREVSLNIKRLMEVGCYRGRRHRMGLPCRGQRTKTNARTRKGPKRTVGAQ 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|322418388|ref|YP_004197611.1| 30S ribosomal protein S13 [Geobacter sp. M18] gi|320124775|gb|ADW12335.1| 30S ribosomal protein S13 [Geobacter sp. M18] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ+I + R L E+EV +IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTATGVDMNTRCDNLTEAEVAKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK + + Sbjct: 61 DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222056682|ref|YP_002539044.1| ribosomal protein S13 [Geobacter sp. FRC-32] gi|254811149|sp|B9M6F5|RS13_GEOSF RecName: Full=30S ribosomal protein S13 gi|221565971|gb|ACM21943.1| ribosomal protein S13 [Geobacter sp. FRC-32] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG +SQ I + + R L ESEV +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRSTSQKILAEAGVDANTRSDNLTESEVAKIRENI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK + + Sbjct: 61 DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294675881|ref|YP_003576496.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003] gi|294474701|gb|ADE84089.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++ I + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALQYIHGIGPMFAKQIVEAVGIAEARRVNELTDAEVLAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DAHFTVEGDLRREVSMNIKRLMDLGCYRGLRHRKNLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291296966|ref|YP_003508364.1| 30S ribosomal protein S13 [Meiothermus ruber DSM 1279] gi|290471925|gb|ADD29344.1| ribosomal protein S13 [Meiothermus ruber DSM 1279] Length = 126 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IPR KRV AL YI+G+G +++ + P RV L E+EV ++R+ + Sbjct: 1 MARISGVEIPRNKRVDVALTYIYGVGPARAKEALAATNVDPATRVKDLTEAEVARLREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTYKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149202866|ref|ZP_01879837.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035] gi|149143412|gb|EDM31448.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC L+I RRV++L ++E + +R+ I Sbjct: 1 MARIAGVNIPTNKRVPIALTYITGIGHASAKSICEALSIDVSRRVNELSDAEALALREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|162139378|ref|YP_914590.2| 30S ribosomal protein S13 [Paracoccus denitrificans PD1222] gi|158706363|sp|A1B050|RS13_PARDP RecName: Full=30S ribosomal protein S13 Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|146278546|ref|YP_001168705.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17025] gi|166231918|sp|A4WVI6|RS13_RHOS5 RecName: Full=30S ribosomal protein S13 gi|145556787|gb|ABP71400.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17025] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YIHGIG ++ IC+ + I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYIHGIGNHVAEQICDAVGIDRARRVNQLSDAEVLAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238928131|ref|ZP_04659891.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531] gi|238884091|gb|EEQ47729.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531] Length = 122 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG +++ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAANVNPDTRTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254714279|ref|ZP_05176090.1| 30S ribosomal protein S13 [Brucella ceti M644/93/1] gi|254717716|ref|ZP_05179527.1| 30S ribosomal protein S13 [Brucella ceti M13/05/1] gi|261219559|ref|ZP_05933840.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1] gi|261322054|ref|ZP_05961251.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1] gi|260924648|gb|EEX91216.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1] gi|261294744|gb|EEX98240.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1] Length = 122 Score = 183 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K +++I K+ I +RRV+QL ++EV++IR+AI Sbjct: 1 MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|313893169|ref|ZP_07826746.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str. F0412] gi|313442522|gb|EFR60937.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str. F0412] Length = 122 Score = 183 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + +I K I P+ RV L E EV++IR+ + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGPTLAAEIIAKTGINPDTRVRDLSEDEVVKIRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK K + Sbjct: 61 DAEYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300742032|ref|ZP_07072053.1| 30S ribosomal protein S13 [Rothia dentocariosa M567] gi|311111946|ref|YP_003983168.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931] gi|300381217|gb|EFJ77779.1| 30S ribosomal protein S13 [Rothia dentocariosa M567] gi|310943440|gb|ADP39734.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931] Length = 153 Score = 183 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + + P+ RV L + E++ +R I Sbjct: 32 MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 91 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 92 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 151 Query: 121 KR 122 K+ Sbjct: 152 KK 153 >gi|163745566|ref|ZP_02152926.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45] gi|161382384|gb|EDQ06793.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGTSSAKAICEAVGIDATRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254511521|ref|ZP_05123588.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11] gi|221535232|gb|EEE38220.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S++ IC + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIEAHRRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260577157|ref|ZP_05845134.1| ribosomal protein S13 [Rhodobacter sp. SW2] gi|259020631|gb|EEW23950.1| ribosomal protein S13 [Rhodobacter sp. SW2] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG ++ IC + I RRV+ L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGPHIAEQICEAVGIDRARRVNDLTDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANLTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312115709|ref|YP_004013305.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100] gi|311220838|gb|ADP72206.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YIHGIG K +++IC+K++IP ERRV++L ++E++QIR+ I Sbjct: 1 MARIAGVNIPSNKRVEIGLRYIHGIGAKYAKEICDKVSIPVERRVNELSDAEILQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126724890|ref|ZP_01740733.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150] gi|126706054|gb|EBA05144.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S+ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTGKRVPIALTYITGIGTTSAAAICEAVGIESTRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DANYNVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257792537|ref|YP_003183143.1| 30S ribosomal protein S13 [Eggerthella lenta DSM 2243] gi|317490403|ref|ZP_07948887.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA] gi|325833513|ref|ZP_08165962.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1] gi|257476434|gb|ACV56754.1| ribosomal protein S13 [Eggerthella lenta DSM 2243] gi|316910538|gb|EFV32163.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA] gi|325485437|gb|EGC87906.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ L YI+GIG +S+ I + + P RV L E ++ ++R I Sbjct: 1 MARLVGVDLPRDKRIEVGLTYIYGIGLTTSKKILAETGVDPSVRVKDLTEDDLTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +VEGDL R V+ N+KRLM++GCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 QANIKVEGDLHREVSQNVKRLMEIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRKQIGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222085697|ref|YP_002544227.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84] gi|254811120|sp|B9JDV0|RS13_AGRRK RecName: Full=30S ribosomal protein S13 gi|221723145|gb|ACM26301.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84] Length = 122 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +Q+IC K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALRYIHGIGPKFAQEICEKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR +MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYQVEGDLRRETSMNIKRLMDLGSYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218294779|ref|ZP_03495633.1| ribosomal protein S13 [Thermus aquaticus Y51MC23] gi|218244687|gb|EED11211.1| ribosomal protein S13 [Thermus aquaticus Y51MC23] Length = 126 Score = 183 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGIGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENAWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVPGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254421006|ref|ZP_05034730.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3] gi|196187183|gb|EDX82159.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3] Length = 133 Score = 183 bits (467), Expect = 6e-45, Method: Composition-based stats. Identities = 79/121 (65%), Positives = 95/121 (78%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV AL YIHGIG +++DI K+ I P RRV+QL ++EV+ IR+ I+ Sbjct: 13 ARIAGVNIPTNKRVEIALQYIHGIGPAAAKDITEKVGIEPARRVNQLTDAEVLSIRETID 72 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K +K Sbjct: 73 KDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 132 Query: 122 R 122 + Sbjct: 133 K 133 >gi|304321462|ref|YP_003855105.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503] gi|303300364|gb|ADM09963.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503] Length = 122 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++I +++ I ERRV +L ++E+++IR+AI Sbjct: 1 MARIAGVNIPNNKRVHIALTYIHGIGPSLAKEITDRVGIAEERRVQELSDAEILRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR A+NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DEGYTVEGDLRRETAVNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|256826597|ref|YP_003150556.1| 30S ribosomal protein S13P [Cryptobacterium curtum DSM 15641] gi|256582740|gb|ACU93874.1| SSU ribosomal protein S13P [Cryptobacterium curtum DSM 15641] Length = 122 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ L YI+GIG +SQ I + + P+ RV + E ++ +IR + Sbjct: 1 MARLVGVDLPRDKRIEVGLTYIYGIGLTTSQKILAETGVDPDTRVRDITEEDLTKIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDL R V+ N+KRLM++GCYRGLRHR+GLPV GQRTHTNARTRK K + Sbjct: 61 NENLSVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKQIGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|118579142|ref|YP_900392.1| 30S ribosomal protein S13 [Pelobacter propionicus DSM 2379] gi|158706257|sp|A1ALW4|RS13_PELPD RecName: Full=30S ribosomal protein S13 gi|118501852|gb|ABK98334.1| SSU ribosomal protein S13P [Pelobacter propionicus DSM 2379] Length = 122 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+V AL YI+GIG +++ I + P R L E++V +R I Sbjct: 1 MARIAGIDLPKNKRIVIALTYIYGIGNSTAEKILEATNVDPNTRTDNLTEADVSHLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 DRNIKVEGDLRREISMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|220903957|ref|YP_002479269.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254811146|sp|B8IYL4|RS13_DESDA RecName: Full=30S ribosomal protein S13 gi|219868256|gb|ACL48591.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 122 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG ++ I + + ER + L EV +IR+ + Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGIGRTTAMKILDTTGVNWERSIDDLSADEVNEIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ Y+VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK +G V + Sbjct: 61 EQHYKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|77462281|ref|YP_351785.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides 2.4.1] gi|126461157|ref|YP_001042271.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17029] gi|221638135|ref|YP_002524397.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131] gi|91207723|sp|Q3J5Q0|RS13_RHOS4 RecName: Full=30S ribosomal protein S13 gi|158706272|sp|A3PGN3|RS13_RHOS1 RecName: Full=30S ribosomal protein S13 gi|254811163|sp|B9KLB3|RS13_RHOSK RecName: Full=30S ribosomal protein S13 gi|77386699|gb|ABA77884.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides 2.4.1] gi|126102821|gb|ABN75499.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17029] gi|221158916|gb|ACL99895.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131] Length = 122 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YIHGIG + IC+ + I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYIHGIGDFVAGQICDAVGIDRARRVNELSDAEVLSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148263162|ref|YP_001229868.1| 30S ribosomal protein S13 [Geobacter uraniireducens Rf4] gi|189044277|sp|A5GAU3|RS13_GEOUR RecName: Full=30S ribosomal protein S13 gi|146396662|gb|ABQ25295.1| SSU ribosomal protein S13P [Geobacter uraniireducens Rf4] Length = 122 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG ++Q I + R L ESE+ +IR+ I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIYGIGRSTAQKILADAGVDSNTRSDNLTESEIARIRENI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK + + Sbjct: 61 DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|23492405|dbj|BAC17379.1| putative 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] Length = 142 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + + P+ R L + ++ +R I Sbjct: 21 MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 80 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 81 EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 140 Query: 121 KR 122 K+ Sbjct: 141 KK 142 >gi|295694863|ref|YP_003588101.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912] gi|295410465|gb|ADG04957.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912] Length = 122 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S I + + P+ RV L + EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRPMSNRILRETGVNPDTRVRDLTDEEVARLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR VAMNIKRL ++GCYRGLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DRNLKVEGDLRRDVAMNIKRLTEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312899069|ref|ZP_07758453.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359] gi|310619854|gb|EFQ03430.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359] Length = 122 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SSQ+I K I P+ RV L E EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSSSQEILAKTGINPDTRVRDLTEDEVQKIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y+VEGDLRR A+NIKRL+++ YRG RHR GLP+RGQRT TNARTRK K + Sbjct: 61 GEEYKVEGDLRRETALNIKRLIEVNSYRGKRHRSGLPLRGQRTKTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15807119|ref|NP_295848.1| 30S ribosomal protein S13 [Deinococcus radiodurans R1] gi|32363426|sp|Q9RSJ9|RS13_DEIRA RecName: Full=30S ribosomal protein S13 gi|6459923|gb|AAF11675.1|AE002047_8 ribosomal protein S13 [Deinococcus radiodurans R1] Length = 126 Score = 183 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG S++I + + P+ RV L E+E +R+AI Sbjct: 1 MARIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EKTYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|323141379|ref|ZP_08076270.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067] gi|322414128|gb|EFY04956.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067] Length = 122 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI+GIG S++I K I P+ RV L E EV +IR+ + Sbjct: 1 MARISGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEEEVAKIRETL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +QDY+VEGDLRR ++NIKRL+++G YRG RHR GLPVRGQ T NARTRK + + Sbjct: 61 DQDYKVEGDLRREESLNIKRLIEIGSYRGRRHRMGLPVRGQNTKNNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|289449373|ref|YP_003475758.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289183920|gb|ADC90345.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 122 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P KR+ AL YI+GIG S +I K + P+ RV L + E+ +IR + Sbjct: 1 MARISGVDLPNEKRLEIALTYIYGIGRTLSGEIIAKCGLNPDTRVKDLSDDEIAKIRDVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR VA+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK + + Sbjct: 61 ENQYKVEGDLRREVALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPKRTMANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|115376113|ref|ZP_01463358.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1] gi|310821019|ref|YP_003953377.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1] gi|115366928|gb|EAU65918.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1] gi|309394091|gb|ADO71550.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1] Length = 128 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 73/121 (60%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P AKR V +L YI+GIG K++ +IC I R L + + +IR I Sbjct: 1 MARIAGVDLPPAKRAVISLQYIYGIGNKTAHEICAAAGIDLTTRTKDLTDEQARKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTN+RTRK +G V Sbjct: 61 EANLKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNSRTRKGPKRGIVRA 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|313895242|ref|ZP_07828799.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str. F0430] gi|320529820|ref|ZP_08030897.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399] gi|312976137|gb|EFR41595.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str. F0430] gi|320137838|gb|EFW29743.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399] Length = 122 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +S+ + + P+ R L E EV+++R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTTSKKLLAIADVNPDARTRDLTEDEVVRLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83854950|ref|ZP_00948480.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1] gi|83842793|gb|EAP81960.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1] Length = 133 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 76/121 (62%), Positives = 92/121 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP AKRV AL YI GIG S+ IC + I RR+++L ++E+++IR+ I+ Sbjct: 13 ARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYID 72 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K Sbjct: 73 ENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 132 Query: 122 R 122 + Sbjct: 133 K 133 >gi|282857338|ref|ZP_06266575.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455] gi|282584838|gb|EFB90169.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455] Length = 126 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 68/124 (54%), Positives = 86/124 (69%), Gaps = 3/124 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG ++++I K + P+ RV L E E +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSTAREILKKTGVNPDTRVKDLTEEEAQLLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART---RKKFGKGG 117 +++VEGDLRR V+MNIKRLMD+GCYRG+RHR GLP RGQRT TNART RK + Sbjct: 61 VNNHKVEGDLRREVSMNIKRLMDIGCYRGIRHRLGLPCRGQRTKTNARTWKNRKGRSRPV 120 Query: 118 VARK 121 +K Sbjct: 121 AGKK 124 >gi|114570323|ref|YP_757003.1| 30S ribosomal protein S13 [Maricaulis maris MCS10] gi|122315803|sp|Q0ANS2|RS13_MARMM RecName: Full=30S ribosomal protein S13 gi|114340785|gb|ABI66065.1| SSU ribosomal protein S13P [Maricaulis maris MCS10] Length = 122 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 83/122 (68%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG +++IC +++I PERRV +L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVEIALRYIHGIGPAKAKEICEQVSILPERRVSELTDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+QVEGDLRR VA+NIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDHQVEGDLRREVAVNIKRLMDLGNYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|240850813|ref|YP_002972213.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup] gi|240267936|gb|ACS51524.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup] Length = 122 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I ++ IP RRVH+L ++EV+Q+R+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEIIERVGIPLGRRVHELSDAEVLQVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|253577205|ref|ZP_04854525.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str. D14] gi|251843449|gb|EES71477.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str. D14] Length = 122 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKTTGINPDTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKTVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|46199605|ref|YP_005272.1| 30S ribosomal protein S13 [Thermus thermophilus HB27] gi|55981636|ref|YP_144933.1| 30S ribosomal protein S13 [Thermus thermophilus HB8] gi|24212669|sp|P80377|RS13_THET8 RecName: Full=30S ribosomal protein S13 gi|50401368|sp|P62655|RS13_THET2 RecName: Full=30S ribosomal protein S13 gi|10835597|pdb|1FJG|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotics Streptomycin, Spectinomycin, And Paromomycin gi|13096406|pdb|1HR0|M Chain M, Crystal Structure Of Initiation Factor If1 Bound To The 30s Ribosomal Subunit gi|13399804|pdb|1HNW|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Tetracycline gi|13399826|pdb|1HNX|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Pactamycin gi|13399848|pdb|1HNZ|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With Hygromycin B gi|14278022|pdb|1GIX|P Chain P, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1gix, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|14278068|pdb|1IBK|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With The Antibiotic Paromomycin gi|14278089|pdb|1IBL|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site And With The Antibiotic Paromomycin gi|14278113|pdb|1IBM|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In Complex With A Messenger Rna Fragment And Cognate Transfer Rna Anticodon Stem-Loop Bound At The A Site gi|15826132|pdb|1JGO|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgo, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826157|pdb|1JGP|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgp, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|15826182|pdb|1JGQ|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File, 1jgq, Contains The 30s Ribosome Subunit, Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy gi|20663898|pdb|1J5E|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit gi|24987759|pdb|1MJ1|P Chain P, Fitting The Ternary Complex Of Ef-TuTRNAGTP AND RIBOSOMAL Proteins Into A 13 A Cryo-Em Map Of The Coli 70s Ribosome gi|27065888|pdb|1N32|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position At The A Site With Paromomycin gi|27065915|pdb|1N33|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Bound To Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position At The A Site With Paromomycin gi|27065942|pdb|1N34|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Codon And Crystallographically Disordered Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The First Codon Position gi|27065968|pdb|1N36|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit In The Presence Of Crystallographically Disordered Codon And Near-Cognate Transfer Rna Anticodon Stem-Loop Mismatched At The Second Codon Position gi|28373711|pdb|1ML5|P Chain P, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|58177412|pdb|1XMO|M Chain M, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed With Aag-Mrna In The Decoding Center gi|58177435|pdb|1XMQ|M Chain M, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The Decoding Center gi|58177476|pdb|1XNQ|M Chain M, Structure Of An Inosine-Adenine Wobble Base Pair Complex In The Context Of The Decoding Center gi|58177499|pdb|1XNR|M Chain M, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair In The Context Of The Decoding Center gi|66361066|pdb|1YL4|P Chain P, Crystal Structure Of 70s Ribosome With Thrs Operator And Trnas. 30s Subunit. The Coordinates For The 50s Subunit Are In The Pdb Entry 1yl3 gi|88192248|pdb|2B64|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|88192311|pdb|2B9M|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400. gi|88192367|pdb|2B9O|M Chain M, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site. This File Contains The 30s Subunit, Trnas And Mrna From A Crystal Structure Of The Whole Ribosomal Complex With A Stop Codon In The A-Site And Is Described In Remark 400. gi|110591335|pdb|2F4V|M Chain M, 30s Ribosome + Designer Antibiotic gi|116667666|pdb|2HHH|M Chain M, Crystal Structure Of Kasugamycin Bound To The 30s Ribosomal Subunit gi|116668209|pdb|2J00|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule I. gi|116668270|pdb|2J02|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4) This File Contains The 30s Subunit, Mrna, A-, P- And E-Site Trnas And Paromomycin For Molecule Ii. gi|119389724|pdb|2HGI|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome Showing How The 16s 3'-End Mimicks Mrna E And P Codons. This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgj. gi|119389781|pdb|2HGP|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome With Translocated And Rotated Shine-Dalgarno Duplex. This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgq. gi|119389837|pdb|2HGR|P Chain P, 70s T.Th. Ribosome Functional Complex With Mrna And E- And P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 2hgu. gi|149242720|pdb|2OW8|NN Chain n, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 2ow8, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsa. gi|149243630|pdb|2UU9|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gug-Codon In The A-Site And Paromomycin. gi|149243657|pdb|2UUA|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guc-Codon In The A-Site And Paromomycin. gi|149243684|pdb|2UUB|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Guu-Codon In The A-Site And Paromomycin. gi|149243711|pdb|2UUC|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Complexed With A Valine-Asl With Cmo5u In Position 34 Bound To An Mrna With A Gua-Codon In The A-Site And Paromomycin. gi|149243850|pdb|2UXC|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Ucgu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836420|pdb|2UXB|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Gggu In The Context Of The Thermus Thermophilus 30s Subunit. gi|157836497|pdb|2V46|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 1 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 1. gi|157836553|pdb|2V48|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And Trna-Fmet (Part 3 Of 4). This File Contains The 30s Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For Molecule 2. gi|158430912|pdb|2UXD|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop In Complex With Its Cognate Mrna Cggg In The Context Of The Thermus Thermophilus 30s Subunit. gi|160285951|pdb|2QNH|NN Chain n, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 2qnh, Contains The 30s Ribosome Subunit, Two Trna, And Mrna Molecules. 50s Ribosome Subunit Is In The File 1vsp. gi|186972861|pdb|2VQE|M Chain M, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|186972884|pdb|2VQF|M Chain M, Modified Uridines With C5-Methylene Substituents At The First Position Of The Trna Anticodon Stabilize U-G Wobble Pairing During Decoding gi|209156508|pdb|3D5A|M Chain M, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156564|pdb|3D5C|M Chain M, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|211938831|pdb|2JL5|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938889|pdb|2JL7|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|218766785|pdb|3F1E|M Chain M, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766841|pdb|3F1G|M Chain M, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|226887386|pdb|2WDG|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887411|pdb|2WDH|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A-Site Trna, Deacylated P-Site Trna, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|226887500|pdb|2WDK|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule I. gi|226887557|pdb|2WDM|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In Complex With Mrna, Paromomycin, Acylated A- And P-Site Trnas, And E-Site Trna. This File Contains The 30s Subunit A-,P-, And E-Site Trnas And Paromomycin For Molecule Ii. gi|237823541|pdb|2WH1|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823600|pdb|2WH3|M Chain M, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit. gi|260099998|pdb|3HUW|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule I. gi|260100054|pdb|3HUY|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For Molecule Ii. gi|261824496|pdb|2WRI|M Chain M, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 1 Of 4). gi|261824558|pdb|2WRK|M Chain M, The Structure Of The Ribosome With Elongation Factor G Trapped In The Post-Translocational State (Part 3 Of 4). gi|261824620|pdb|2WRN|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 1 Of 4). gi|261824679|pdb|2WRQ|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu And Trna (Part 3 Of 4). gi|281307179|pdb|3KIQ|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 1 Of 4) gi|281307237|pdb|3KIS|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Precleavage State; Part 3 Of 4) gi|281307295|pdb|3KIU|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 1 Of 4) gi|281307353|pdb|3KIX|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome (Postcleavage State; Part 3 Of 4) gi|288965616|pdb|3KNH|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526694|pdb|3KNJ|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii' gi|289526719|pdb|3KNL|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule I gi|289526744|pdb|3KNN|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome. This File Contains The 30s Subunit For Molecule Ii gi|294979516|pdb|3I8G|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f (50s). gi|294979541|pdb|3I8H|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g (30s). gi|294979600|pdb|3I9B|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B. The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule A In The S Asymmetric Unit Is Deposited As 3i9d (30s) And 3i9e (50s) gi|294979654|pdb|3I9D|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A. The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule B In The S Asymmetric Unit Is Deposited As 3i9b (30s) And 3i9c (50s) gi|295982087|pdb|2X9R|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982146|pdb|2X9T|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|307567974|pdb|2XFZ|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 1 Of 4) gi|307568032|pdb|2XG1|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The 70s Ribosome (Part 3 Of 4) gi|307776624|pdb|3OTO|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga Mutant Of Thermus Thermophilus (Hb8) gi|309320247|pdb|3OGE|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320268|pdb|3OGY|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Chloramphenicol. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320349|pdb|3OHC|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320370|pdb|3OHD|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed With Erythromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320451|pdb|3OHY|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320502|pdb|3OI0|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Azithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320553|pdb|3OI2|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|309320604|pdb|3OI4|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome Complexed With Telithromycin. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|312207685|pdb|2XQD|M Chain M, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s Ribosome With A Gtp Analog gi|313754011|pdb|2XSY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Pre- Translocational Translocation Intermediate Ti(Pre) gi|313754126|pdb|2XUY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Post- Translocational Translocation Intermediate Ti(Post) gi|325533414|pdb|2Y0U|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533473|pdb|2Y0W|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533532|pdb|2Y0Y|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533591|pdb|2Y10|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533650|pdb|2Y12|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Near-Cognate Codon On The 70s Ribosome gi|325533709|pdb|2Y14|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533768|pdb|2Y16|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|325533827|pdb|2Y18|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A Cognate Codon On The 70s Ribosome. gi|4519420|dbj|BAA75546.1| ribosomal protein S13 [Thermus thermophilus] gi|46197231|gb|AAS81645.1| SSU ribosomal protein S13P [Thermus thermophilus HB27] gi|55773049|dbj|BAD71490.1| 30S ribosomal protein S13 [Thermus thermophilus HB8] Length = 126 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ + Sbjct: 1 MARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|39997926|ref|NP_953877.1| 30S ribosomal protein S13 [Geobacter sulfurreducens PCA] gi|81701334|sp|Q749B0|RS13_GEOSL RecName: Full=30S ribosomal protein S13 gi|39984871|gb|AAR36227.1| ribosomal protein S13 [Geobacter sulfurreducens PCA] gi|298506864|gb|ADI85587.1| ribosomal protein S13 [Geobacter sulfurreducens KN400] Length = 122 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI GIG ++Q I + + + R L ESEV +IR I Sbjct: 1 MARIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR V+M+IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 DKNLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|217077307|ref|YP_002335025.1| 30S ribosomal protein S13 [Thermosipho africanus TCF52B] gi|226712795|sp|B7IHX0|RS13_THEAB RecName: Full=30S ribosomal protein S13 gi|217037162|gb|ACJ75684.1| ribosomal protein S13p/S18e [Thermosipho africanus TCF52B] Length = 122 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL YI+GIG ++ IC I P++RV +L + E+ +I I Sbjct: 1 MARIVGVEIPNDKKVEIALTYIYGIGRTRAKQICEATNIDPDKRVRELNDEEISKIATYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+++VEG+LR V NIKRL+D+GCYRG RH+ GLPVRGQ+T +NARTRK + + Sbjct: 61 QQNFKVEGELRTEVMQNIKRLIDIGCYRGFRHKLGLPVRGQKTKSNARTRKGPRPSRIKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|49475772|ref|YP_033813.1| 30S ribosomal protein S13 [Bartonella henselae str. Houston-1] gi|81647796|sp|Q6G2Y7|RS13_BARHE RecName: Full=30S ribosomal protein S13 gi|49238579|emb|CAF27820.1| 30S ribosomal protein s13 [Bartonella henselae str. Houston-1] Length = 122 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K+ IP RRVH+L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITKKVGIPIGRRVHELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|117924177|ref|YP_864794.1| 30S ribosomal protein S13 [Magnetococcus sp. MC-1] gi|158706244|sp|A0L5Z5|RS13_MAGSM RecName: Full=30S ribosomal protein S13 gi|117607933|gb|ABK43388.1| SSU ribosomal protein S13P [Magnetococcus sp. MC-1] Length = 122 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GI S++ I + I P+ RV L ++EV Q+R I Sbjct: 1 MARIAGVNIPVNKRVEIALTYIYGICRDSAKRITKEAGIEPQVRVSDLTDAEVAQLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR +AMN+KRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK K + Sbjct: 61 DNNHTVEGDLRRQIAMNVKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|108761573|ref|YP_631522.1| 30S ribosomal protein S13 [Myxococcus xanthus DK 1622] gi|123374507|sp|Q1D751|RS13_MYXXD RecName: Full=30S ribosomal protein S13 gi|108465453|gb|ABF90638.1| ribosomal protein S13 [Myxococcus xanthus DK 1622] Length = 127 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 77/121 (63%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P KR V +L YI+GIG KS+QDI I P R L E + +IR+ I Sbjct: 1 MARIAGIDLPPNKRAVISLQYIYGIGNKSAQDIIAAAGIDPTTRTKDLTEEQARKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK +G V Sbjct: 61 EASYKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRGIVRA 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|304315966|ref|YP_003851111.1| 30S ribosomal protein S13 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|323706476|ref|ZP_08118037.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum LX-11] gi|302777468|gb|ADL68027.1| 30S ribosomal protein S13 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|323534196|gb|EGB23986.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum LX-11] Length = 122 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 68/113 (60%), Positives = 87/113 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG S +I K + P+ RV L E EV ++R I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEVSRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +++Y+VEGDLRR V++NIKRL+D+GCYRG+RHR+GLPVRGQRT TNARTRK Sbjct: 61 DKEYKVEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTNARTRKGP 113 >gi|320335499|ref|YP_004172210.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211] gi|319756788|gb|ADV68545.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211] Length = 126 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG ++++ + + P+ RV L E+E Q+R AI Sbjct: 1 MARIAGVDLPREKRIEIALTYIYGIGLTRAKEVLAQTGVNPDTRVKNLSEAEQGQLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ ++VEGDLR + NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EKTFKVEGDLRSEIGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254461772|ref|ZP_05075188.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium HTCC2083] gi|206678361|gb|EDZ42848.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium HTCC2083] Length = 122 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI GIG S++ IC + I RRV++L ++EV+ +R+ I Sbjct: 1 MARIAGVNIPTHKRVPIALTYITGIGPASAKAICEAVKIDETRRVNELSDAEVLAVREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 61 DATYNVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302388737|ref|YP_003824558.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646] gi|302199365|gb|ADL06935.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646] Length = 123 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 72/121 (59%), Positives = 90/121 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG S I + + P+ RV L E E+ +R I Sbjct: 1 MARIAGVDLPKDKRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK K AR Sbjct: 61 EKNYKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNARTRKGPRKTVGAR 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|221632954|ref|YP_002522177.1| 30S ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159] gi|254811173|sp|B9KZW3|RS13_THERP RecName: Full=30S ribosomal protein S13 gi|221156457|gb|ACM05584.1| ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159] Length = 128 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL I+GIG+ +++ I + I P +V L + EV ++R I Sbjct: 1 MARIAGVDLPRDKRIEYALTLIYGIGWTTARKILERTGIDPWTKVRDLTDDEVQRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ VEGDLRR VAMNIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK + Sbjct: 61 EKEMVVEGDLRRQVAMNIKRLIDIGCYRGLRHRMGLPVRGQRTRTNARTRKGPRPRIGVK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|168334326|ref|ZP_02692513.1| 30S ribosomal protein S13 [Epulopiscium sp. 'N.t. morphotype B'] Length = 122 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG SS+ I + I + RV L + + +IR I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIYGIGRPSSRKILEAVGIDFDTRVKDLTDEQADKIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 EKTMMVEGDLRREVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114771245|ref|ZP_01448665.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255] gi|114548170|gb|EAU51057.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV AL YI GIG S+ ICN I RR+++L ++E++ IR+ I Sbjct: 1 MARIAGVNLPTHKRVPIALTYITGIGPASADKICNGTKIDAARRINELSDAEILSIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 DANFEVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|46202866|ref|ZP_00052474.2| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum MS-1] Length = 125 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG + +I L IP ERRV+QL + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALTYIHGIGRAKATEITTSLGIPAERRVNQLTDDEVLKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+QVEGDLRR+VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK K + Sbjct: 61 DRDFQVEGDLRRSVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325261518|ref|ZP_08128256.1| 30S ribosomal protein S13 [Clostridium sp. D5] gi|324032972|gb|EGB94249.1| 30S ribosomal protein S13 [Clostridium sp. D5] Length = 127 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ RV L EV +I + I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILTEAGVNPDTRVRDLTSEEVKKISEVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 66 EQSQTVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125 Query: 121 KR 122 K+ Sbjct: 126 KK 127 >gi|15605671|ref|NP_213046.1| 30S ribosomal protein S13 [Aquifex aeolicus VF5] gi|6226059|sp|O66486|RS13_AQUAE RecName: Full=30S ribosomal protein S13 gi|2982822|gb|AAC06445.1| ribosomal protein S13 [Aquifex aeolicus VF5] Length = 126 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG+ +++IC K IP +RV +L E+ +R+ I Sbjct: 1 MARIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDELNTLRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR V +NIK+L D+GCYRG+RH RGLPVRGQ+T TNARTRK K Sbjct: 61 DENYKVEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQQTRTNARTRKGKRKTVGGT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307694126|ref|ZP_07636363.1| 30S ribosomal protein S13 [Ruminococcaceae bacterium D16] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG S+ I K I P+ RV L E + ++R+ I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRTSANKILAKAGINPDTRVKDLTEDDEAKLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y VEGDLRR VAM+IKRL ++GCYRG+RHR+GLPVRGQR+ TNARTRK + + Sbjct: 61 SHEYTVEGDLRRNVAMDIKRLTEIGCYRGIRHRKGLPVRGQRSKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153816226|ref|ZP_01968894.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756] gi|317501798|ref|ZP_07959984.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA] gi|145846409|gb|EDK23327.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756] gi|316896831|gb|EFV18916.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 127 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L EV +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 66 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125 Query: 121 KR 122 K+ Sbjct: 126 KK 127 >gi|291518022|emb|CBK73243.1| 30S ribosomal protein S13 [Butyrivibrio fibrisolvens 16/4] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS + + P RV L + EV +I I Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGRVSSNKVLEAAGVDPNTRVKDLTDEEVKKISTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEG+LRR VA++IKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETLTVEGNLRREVALDIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|94496223|ref|ZP_01302801.1| ribosomal protein S13 [Sphingomonas sp. SKA58] gi|94424402|gb|EAT09425.1| ribosomal protein S13 [Sphingomonas sp. SKA58] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 81/122 (66%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRHTAVSIADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|38233155|ref|NP_938922.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae NCTC 13129] gi|81401847|sp|Q6NJ66|RS13_CORDI RecName: Full=30S ribosomal protein S13 gi|38199414|emb|CAE49057.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLEETGISPDLRTDNLTDEQVSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|331004146|ref|ZP_08327626.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411556|gb|EGG90966.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str. F0167] Length = 122 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS+ I + + P+ RV L + EV ++ Q I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTSSKRILKEAGVNPDTRVKDLTDDEVKELAQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 SDSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89893242|ref|YP_516729.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51] gi|219666515|ref|YP_002456950.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense DCB-2] gi|122483916|sp|Q250K7|RS13_DESHY RecName: Full=30S ribosomal protein S13 gi|254811147|sp|B8G1Z1|RS13_DESHD RecName: Full=30S ribosomal protein S13 gi|89332690|dbj|BAE82285.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51] gi|219536775|gb|ACL18514.1| ribosomal protein S13 [Desulfitobacterium hafniense DCB-2] Length = 123 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG ++Q I + + PE R+ L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIYGIGLPTAQKILARTGVNPETRIRDLSEEEVNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK K A+ Sbjct: 61 DKEIKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPIKTVGAK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|289548517|ref|YP_003473505.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484] gi|289182134|gb|ADC89378.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484] Length = 126 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL Y++GIG+ +++IC K IP +R+ +L E+ IR+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYLYGIGWSRAREICEKTGIPCTKRLGELTPDELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T TNARTRK K Sbjct: 61 EQNYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRTNARTRKGKRKTVGGT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255659526|ref|ZP_05404935.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544] gi|260848079|gb|EEX68086.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544] Length = 123 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG K+SQ++ I P+ R L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIFGIGLKTSQELLKMTGINPDTRTRDLTEDEVVKLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR MNIKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKNVVVEGDLRRERQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302382641|ref|YP_003818464.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264] gi|302193269|gb|ADL00841.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264] Length = 133 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 79/121 (65%), Positives = 95/121 (78%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV AL YIHGIG +++DI K+ I RRV+QL ++EV+QIR+ I+ Sbjct: 13 ARIAGVNIPTNKRVEIALQYIHGIGPAAAKDIVGKVGIEASRRVNQLTDAEVLQIRETID 72 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K +K Sbjct: 73 KDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 132 Query: 122 R 122 + Sbjct: 133 K 133 >gi|326387081|ref|ZP_08208691.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM 19370] gi|326208262|gb|EGD59069.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM 19370] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIVALTYIHGIGPFKARQIADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAEHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|256390170|ref|YP_003111734.1| 30S ribosomal protein S13 [Catenulispora acidiphila DSM 44928] gi|256356396|gb|ACU69893.1| ribosomal protein S13 [Catenulispora acidiphila DSM 44928] Length = 126 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KR+ AL YI+GIG SQ C + I P RV L E +++++RQ I Sbjct: 1 MARLSGVDIPREKRLEIALTYIYGIGRTRSQKTCAETGINPNTRVKDLTEDDLVKLRQWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR V +I+R +++GCY+G+RHR+GLPV GQRTHTNARTRK K + Sbjct: 61 DTNYRVEGDLRREVQADIRRKIEIGCYQGVRHRKGLPVHGQRTHTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312140892|ref|YP_004008228.1| 30S ribosomal protein s13 rpsm [Rhodococcus equi 103S] gi|325675470|ref|ZP_08155154.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707] gi|311890231|emb|CBH49549.1| 30S ribosomal protein S13 RpsM [Rhodococcus equi 103S] gi|325553441|gb|EGD23119.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG +S++I + P+ R L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTTSKEILAATGVNPDLRSKDLTDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EESVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269837091|ref|YP_003319319.1| 30S ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745] gi|269786354|gb|ACZ38497.1| ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745] Length = 124 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 73/122 (59%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG +S+ + + + P+ RV L + EV ++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIYGIGLSTSKKLLERTGVSPDTRVRDLTDDEVGRLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ VEGDLRR + MNIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK + R Sbjct: 61 EKEMVVEGDLRREINMNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPKRAIGVR 120 Query: 121 KR 122 KR Sbjct: 121 KR 122 >gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 [Oribacterium sinus F0268] gi|227842378|gb|EEJ52603.1| ribosomal protein S13 [Oribacterium sinus F0268] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + EV + I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAETGVNPDTRVKDLTDDEVKTLATYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 AEHQMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|150015069|ref|YP_001307323.1| 30S ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052] gi|189040496|sp|A6LPT7|RS13_CLOB8 RecName: Full=30S ribosomal protein S13 gi|149901534|gb|ABR32367.1| ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KRV L YI+GIG +SQ I I P+ RV L E EV +IR I Sbjct: 1 MARISGIDLPREKRVEIGLTYIYGIGLSTSQKILAVTGINPDTRVKDLSEEEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|229825292|ref|ZP_04451361.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC 49176] gi|229790664|gb|EEP26778.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC 49176] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S +I K A+ P+ R L + +V +IR I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRAKSNEILTKAAVDPDIRCKDLSDEQVGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ VEGDLRR VAMNIKRL ++GCYRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 61 EESVLVEGDLRREVAMNIKRLQEIGCYRGVRHRKGLPVRGQNTKNNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302330096|gb|ADL20290.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis 1002] Length = 143 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 22 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 81 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 82 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 141 Query: 121 KR 122 K+ Sbjct: 142 KK 143 >gi|298291460|ref|YP_003693399.1| 30S ribosomal protein S13 [Starkeya novella DSM 506] gi|296927971|gb|ADH88780.1| 30S ribosomal protein S13 [Starkeya novella DSM 506] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKNAADIVEKVGIPLDRRVNQLTDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|87200542|ref|YP_497799.1| 30S ribosomal protein S13 [Novosphingobium aromaticivorans DSM 12444] gi|123488705|sp|Q2G5A8|RS13_NOVAD RecName: Full=30S ribosomal protein S13 gi|87136223|gb|ABD26965.1| SSU ribosomal protein S13P [Novosphingobium aromaticivorans DSM 12444] Length = 122 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L ++E++QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGSFKAKQIADKLGIDHSRRVQDLSDAEILQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DAEHTVEGDLRREVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255994831|ref|ZP_05427966.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989] gi|255993544|gb|EEU03633.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989] Length = 132 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P KR+ L Y++GIG S++I K + P+ RV L E EV +IR+ I Sbjct: 11 MARLAGVDLPNDKRIEIGLTYVYGIGNTKSKEILAKAKVDPDTRVKDLTEDEVGEIRKVI 70 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++ VEGDLRR +MNIKRLM++GCYRG+RHR+GLPVRGQ+T TNARTRK K Sbjct: 71 ENEHMVEGDLRRENSMNIKRLMEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVGRS 130 Query: 121 KR 122 K+ Sbjct: 131 KK 132 >gi|153004797|ref|YP_001379122.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5] gi|166231897|sp|A7HBP2|RS13_ANADF RecName: Full=30S ribosomal protein S13 gi|152028370|gb|ABS26138.1| ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5] Length = 127 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 74/120 (61%), Positives = 92/120 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG ++Q IC++ + R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVALQYIYGIGKTTAQAICHRANVDVTTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ +VEGDLRR +++NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V + Sbjct: 61 EQAVKVEGDLRREISLNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLVRK 120 >gi|150020870|ref|YP_001306224.1| 30S ribosomal protein S13 [Thermosipho melanesiensis BI429] gi|166231928|sp|A6LLN8|RS13_THEM4 RecName: Full=30S ribosomal protein S13 gi|149793391|gb|ABR30839.1| ribosomal protein S13 [Thermosipho melanesiensis BI429] Length = 122 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL YI+GIG ++ IC I P +RV +L + E+ +I I Sbjct: 1 MARIVGVEIPNDKKVEIALTYIYGIGKTRAKQICEATNIDPNKRVRELGDEEISKIATFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+Y+VEG+LR V NIKRL+D+GCYRGLRH+ GLPVRGQ+T +NARTRK + + Sbjct: 61 QQNYKVEGELRTEVMQNIKRLIDIGCYRGLRHKLGLPVRGQKTKSNARTRKGPRPSRIKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300857806|ref|YP_003782789.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis FRC41] gi|300685260|gb|ADK28182.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis FRC41] Length = 142 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 21 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 80 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 81 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 140 Query: 121 KR 122 K+ Sbjct: 141 KK 142 >gi|331088681|ref|ZP_08337591.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA] gi|330407204|gb|EGG86707.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA] Length = 122 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 61 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|322381103|ref|ZP_08055106.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154679|gb|EFX46950.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ AL YI GIG ++Q I N+ + P+ RV L E E+ +IR I Sbjct: 1 MARIAGVDLPRDKRVIIALTYIFGIGKTTAQKIINETGVNPDTRVRDLTEDEISKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKQLKVEGDLRREIALNIKRLVEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225574730|ref|ZP_03783340.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM 10507] gi|225038059|gb|EEG48305.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM 10507] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L + EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRPSATRILADAKVNPDTRVRDLTDEEVNRIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|313680490|ref|YP_004058229.1| SSU ribosomal protein s13p [Oceanithermus profundus DSM 14977] gi|313153205|gb|ADR37056.1| SSU ribosomal protein S13P [Oceanithermus profundus DSM 14977] Length = 126 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI+GIG +++ I RV L E +V+++R + Sbjct: 1 MARIAGVEIPRNKRVEIALTYIYGIGRTRAKEALEATGIDGSIRVKDLSEQDVVKLRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EG+LR V NIKRLMD+GCYRGLRHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 ENKWKLEGELRSEVQSNIKRLMDIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114704506|ref|ZP_01437414.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506] gi|114539291|gb|EAU42411.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR V AL YIHGIG ++ I K + +RRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRAVIALQYIHGIGPSLAKQIMAKANLTEDRRVNDLSDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++QVEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DREHQVEGDLRRETSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325663037|ref|ZP_08151487.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086644|ref|ZP_08335721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470491|gb|EGC73721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA] gi|330409810|gb|EGG89245.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRVSSNRILEEAGVNPDTRVRDLTDEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 DETQLVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|222529705|ref|YP_002573587.1| 30S ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725] gi|302871523|ref|YP_003840159.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47] gi|312127251|ref|YP_003992125.1| 30S ribosomal protein s13 [Caldicellulosiruptor hydrothermalis 108] gi|312135471|ref|YP_004002809.1| 30S ribosomal protein s13 [Caldicellulosiruptor owensensis OL] gi|312622070|ref|YP_004023683.1| 30S ribosomal protein s13 [Caldicellulosiruptor kronotskyensis 2002] gi|254811124|sp|B9MKF6|RS13_ANATD RecName: Full=30S ribosomal protein S13 gi|222456552|gb|ACM60814.1| ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725] gi|302574382|gb|ADL42173.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47] gi|311775522|gb|ADQ05009.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL] gi|311777270|gb|ADQ06756.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108] gi|312202537|gb|ADQ45864.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis 2002] Length = 124 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|73913588|gb|AAZ91709.1| 30S Ribosomal protein S13 [Corynebacterium stationis] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EASWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154498910|ref|ZP_02037288.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC 29799] gi|150271750|gb|EDM98976.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC 29799] Length = 122 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ L YI+GIG S+ I + I P+ RV L E++ +R+ I Sbjct: 1 MARIAGIDLPKDKRIEIGLTYIYGIGRTSANKILAETGINPDTRVKDLTEADEAALRECI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y VEGDLRR VAM+IKRL ++GCYRGLRHR+GLPVRGQR+ TNARTRK + + Sbjct: 61 AHNYTVEGDLRRDVAMDIKRLTEIGCYRGLRHRKGLPVRGQRSKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269925856|ref|YP_003322479.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798] gi|269789516|gb|ACZ41657.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798] Length = 124 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 73/121 (60%), Positives = 87/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG SS+ I K + P+ RV L E EV +IR I Sbjct: 1 MARIAGVDLPRDKRVEVALTYIYGIGPTSSKKILEKTGVNPDTRVKDLTEDEVARIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR VA NI+RL+++GCYRG+RHRR LPV GQRT TNAR R+ K AR Sbjct: 61 EHEYVVEGDLRREVAQNIRRLIEIGCYRGIRHRRNLPVHGQRTRTNARQRRGPRKTVGAR 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|296119327|ref|ZP_06837895.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306] gi|295967719|gb|EFG80976.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306] Length = 122 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EASFKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238916289|ref|YP_002929806.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC 27750] gi|259494676|sp|C4Z2V4|RS13_EUBE2 RecName: Full=30S ribosomal protein S13 gi|238871649|gb|ACR71359.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC 27750] Length = 124 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 2/124 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG + I + + P+ RV L + EV +I + I Sbjct: 1 MARISGVDLPREKRIEIGLTYVYGIGRVRASKILEEAGVNPDTRVKDLTDEEVAKIAKVI 60 Query: 61 EQD--YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + D + VEGDLRR VAMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART K K Sbjct: 61 DADPEHLVEGDLRREVAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNARTCKGPKKTVA 120 Query: 119 ARKR 122 +K+ Sbjct: 121 NKKK 124 >gi|290968218|ref|ZP_06559761.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L] gi|290781700|gb|EFD94285.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG SSQ+I K I P+ RV L E EV +IR+ I Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIFGIGLSSSQEILKKTGINPDTRVRDLTEDEVQKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y+VEGDLRR AMN+KRL+++ YRG RHR GLPVRGQR+ TNARTRK K + Sbjct: 61 GSEYKVEGDLRREGAMNVKRLIEINSYRGKRHRAGLPVRGQRSKTNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|284049233|ref|YP_003399572.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731] gi|283953454|gb|ADB48257.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731] Length = 121 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEAEIAKLREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR ++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK K A+ Sbjct: 61 DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKKVAGAK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|188584862|ref|YP_001916407.1| SSU ribosomal protein S13P [Natranaerobius thermophilus JW/NM-WN-LF] gi|226712768|sp|B2A4P7|RS13_NATTJ RecName: Full=30S ribosomal protein S13 gi|179349549|gb|ACB83819.1| SSU ribosomal protein S13P [Natranaerobius thermophilus JW/NM-WN-LF] Length = 121 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 87/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +++I + + + RV L E EV ++R I Sbjct: 1 MARIAGVDLPRNKRVAIGLTYIYGIGHSKAEEIVEQTGVSTDTRVKDLTEDEVNRLRSTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR ++MNIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK + A+ Sbjct: 61 DNDYTVEGDLRREISMNIKRLMEIGCYRGLRHRRGLPVRGQSTKNNARTRKGPKRTVGAK 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|251772515|gb|EES53081.1| ribosomal protein S13 [Leptospirillum ferrodiazotrophum] Length = 124 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KR+ AL YI G+G +SQ I K + P+ RVH L + EV ++R+A+ Sbjct: 1 MARIVGIDLPRNKRIEIALTYIFGVGKPTSQLILKKAGVNPDTRVHALTDDEVAKLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E VEGDLRR ++ NIKR MD+GCY+GLRHR+GLPVRGQRT TNARTRK KG A+ Sbjct: 61 ETTCSVEGDLRREISQNIKRKMDIGCYQGLRHRKGLPVRGQRTKTNARTRKGPKKGIGAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|49474382|ref|YP_032424.1| 30S ribosomal protein S13 [Bartonella quintana str. Toulouse] gi|81646970|sp|Q6FZE4|RS13_BARQU RecName: Full=30S ribosomal protein S13 gi|49239886|emb|CAF26284.1| 30s ribosomal protein s13 [Bartonella quintana str. Toulouse] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +Q+I K+ IP RRV +L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPRFAQEITKKVGIPVGRRVCELSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y+VEGDLRR VA+N+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DQGYKVEGDLRREVAVNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227497206|ref|ZP_03927454.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434] gi|226833337|gb|EEH65720.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434] Length = 124 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++ +R I Sbjct: 1 MARISGVDLPREKRVEVALTYIFGIGRTRAHETLAATGVNPDTRVKDLSEDELVLLRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK + + Sbjct: 61 DANYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154507839|ref|ZP_02043481.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC 17982] gi|293190234|ref|ZP_06608730.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309] gi|315605924|ref|ZP_07880955.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. F0310] gi|153797473|gb|EDN79893.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC 17982] gi|292821050|gb|EFF80003.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309] gi|315312206|gb|EFU60292.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str. F0310] Length = 132 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E E++++R I Sbjct: 9 MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 68 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 69 EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 128 Query: 121 KR 122 K+ Sbjct: 129 KK 130 >gi|163796897|ref|ZP_02190854.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199] gi|159177886|gb|EDP62435.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVNIP KRVV AL YIHGIG ++ IC+ + +P ERRVH+L E E+ ++R++I Sbjct: 1 MARISGVNIPTQKRVVIALTYIHGIGRTTASRICSSVGVPAERRVHELTEDELSRLRESI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AM+IKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADLIVEGDLRRQTAMSIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|260893347|ref|YP_003239444.1| 30S ribosomal protein S13 [Ammonifex degensii KC4] gi|260865488|gb|ACX52594.1| 30S ribosomal protein S13 [Ammonifex degensii KC4] Length = 123 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 72/123 (58%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG S++ I K + P+ RV L E E+ +IR+ I Sbjct: 1 MARIAGVDLPKDKRVEIALTYIYGIGRSSAKKILEKTGVNPDTRVKDLTEDEIARIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR +AMNI+RL+D+ CYRG+RH RGLPVRGQRT TNARTRK + GV Sbjct: 61 DKEYKVEGDLRREIAMNIRRLIDIRCYRGIRHIRGLPVRGQRTRTNARTRKGPRRTVGVK 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|302205541|gb|ADL09883.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis C231] gi|308275777|gb|ADO25676.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis I19] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + + + I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|182418811|ref|ZP_02950076.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521] gi|237666810|ref|ZP_04526795.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377308|gb|EDT74869.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521] gi|237658009|gb|EEP55564.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+G+G +SQ I I P+ R+ L E EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGVGLSTSQKILATTGINPDTRIKDLSEEEVNEIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 NKNLIVEGDLRRDVALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|308070949|ref|YP_003872554.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681] gi|310644174|ref|YP_003948933.1| 30S ribosomal protein s13 [Paenibacillus polymyxa SC2] gi|305860228|gb|ADM72016.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681] gi|309249125|gb|ADO58692.1| 30S ribosomal protein S13 [Paenibacillus polymyxa SC2] Length = 122 Score = 180 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I + I RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKETGISANTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKEVKVEGDLRREISLNIKRLTEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|210623212|ref|ZP_03293651.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275] gi|210153749|gb|EEA84755.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275] Length = 149 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 64/113 (56%), Positives = 83/113 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I P+ R+ L E EV ++R+ I Sbjct: 27 MARIAGVDLPREKRAEIGLTYIYGIGKATSNEILAKAGINPDTRIKDLSEDEVNELRKII 86 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP RGQ+T TNARTRK Sbjct: 87 DEDFLVEGDLRREIALNIKRLRDIKCYRGIRHMKGLPCRGQKTKTNARTRKGP 139 >gi|183221325|ref|YP_001839321.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911416|ref|YP_001962971.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226712754|sp|B0SA23|RS13_LEPBA RecName: Full=30S ribosomal protein S13 gi|226712755|sp|B0SSF5|RS13_LEPBP RecName: Full=30S ribosomal protein S13 gi|167776092|gb|ABZ94393.1| 30S Ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779747|gb|ABZ98045.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 125 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+V L YI GIG SSQ+I K I RV L + IR+ I Sbjct: 1 MARIAGVDLPSNKRIVIGLTYIFGIGKTSSQNILKKAGIDESIRVKDLSDEHEAAIRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ YQVEGDLR V +NIKRLMD+GCYRG RHRRGLPV GQRT TNARTRK K + Sbjct: 61 EESYQVEGDLRSEVNLNIKRLMDVGCYRGFRHRRGLPVNGQRTRTNARTRKGVKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225571579|ref|ZP_03780575.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM 15053] gi|225159656|gb|EEG72275.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM 15053] Length = 170 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I ++ + P+ R L + +V +I I Sbjct: 49 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILSEAGVSPDIRCRDLTDEDVKKISAVI 108 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 109 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 168 Query: 121 KR 122 K+ Sbjct: 169 KK 170 >gi|300779799|ref|ZP_07089655.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030] gi|300533909|gb|EFK54968.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030] Length = 122 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKELLEKTGISPDLRTDNLTDDQVAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENSWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254503181|ref|ZP_05115332.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11] gi|222439252|gb|EEE45931.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11] Length = 126 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 97/121 (80%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRVV AL YIHGIG K +Q+I K +I RRV++L ++EV+QIR+ I+ Sbjct: 6 ARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIVEKNSIDAARRVNELSDAEVLQIRETID 65 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 66 RDYMVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 125 Query: 122 R 122 + Sbjct: 126 K 126 >gi|58038833|ref|YP_190797.1| 30S ribosomal protein S13 [Gluconobacter oxydans 621H] gi|81352519|sp|Q5FU05|RS13_GLUOX RecName: Full=30S ribosomal protein S13 gi|58001247|gb|AAW60141.1| SSU ribosomal protein S13P [Gluconobacter oxydans 621H] Length = 125 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL Y++GIG ++Q ICNKL IP +RV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALRYVYGIGPSTAQSICNKLEIPDAKRVNELSDDEIVKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK + Sbjct: 61 DSELRVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225016260|ref|ZP_03705452.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum DSM 5476] gi|224950935|gb|EEG32144.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum DSM 5476] Length = 122 Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG K+++DI + P+ RV L E E ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVALTYIFGIGQKTAKDIIAATGVNPDTRVRDLTEDEASKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR VA+NIKRL+++ CYRG RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 DKNLMVEGDLRRDVALNIKRLIEINCYRGTRHRKGLPVRGQKTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329889149|ref|ZP_08267492.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568] gi|328844450|gb|EGF94014.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568] Length = 122 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++++I K+ I P RRV+QL ++E++QIR+ I Sbjct: 1 MARIAGVNIPTNKRVEIALQYIHGIGAHNAKEITAKIGIEPARRVNQLTDAEILQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|57239315|ref|YP_180451.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58579281|ref|YP_197493.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58617335|ref|YP_196534.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel] gi|75356679|sp|Q5FFR9|RS13_EHRRG RecName: Full=30S ribosomal protein S13 gi|81352862|sp|Q5HAU3|RS13_EHRRW RecName: Full=30S ribosomal protein S13 gi|57161394|emb|CAH58318.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] gi|58416947|emb|CAI28060.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel] gi|58417907|emb|CAI27111.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden] Length = 123 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRVVIALTYIYGIGISLANKICESCNIDHNIRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK + VA Sbjct: 61 RENYVVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSRLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|161485990|ref|NP_737179.2| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] gi|32363329|sp|Q8FS35|RS13_COREF RecName: Full=30S ribosomal protein S13 Length = 122 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + + P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312793914|ref|YP_004026837.1| 30S ribosomal protein s13 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877390|ref|ZP_07737355.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A] gi|311795864|gb|EFR12228.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A] gi|312181054|gb|ADQ41224.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 124 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVARIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|294085980|ref|YP_003552740.1| 30S ribosomal protein S13 [Candidatus Puniceispirillum marinum IMCC1322] gi|292665555|gb|ADE40656.1| ribosomal protein S13 [Candidatus Puniceispirillum marinum IMCC1322] Length = 122 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG ++++IC + +P ERRV+ L E E+ ++R I Sbjct: 1 MARIAGVNIPTKKRVEIALTYIHGIGTTTAKNICERAGVPDERRVNDLSEEELTKLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR +MNIKR +DLGC RGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DADVLVEGDLRRQTSMNIKRYLDLGCLRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296116711|ref|ZP_06835321.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769] gi|295976923|gb|EFG83691.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769] Length = 125 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 83/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG +Q IC+KL+IP ERRV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIALRYIYGIGATKAQTICDKLSIPGERRVNELSDDEIVKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK + Sbjct: 61 DNDYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170738681|ref|YP_001767336.1| 30S ribosomal protein S13 [Methylobacterium sp. 4-46] gi|226712763|sp|B0UHU7|RS13_METS4 RecName: Full=30S ribosomal protein S13 gi|168192955|gb|ACA14902.1| ribosomal protein S13 [Methylobacterium sp. 4-46] Length = 122 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|237786337|ref|YP_002907042.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM 44385] gi|259494670|sp|C4LKZ4|RS13_CORK4 RecName: Full=30S ribosomal protein S13 gi|237759249|gb|ACR18499.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM 44385] Length = 122 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++ + K I P+ R L + +V ++R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTSAKQLLEKTEISPDLRTDALTDDQVAKLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EAEYTVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319442998|ref|ZP_07992154.1| 30S ribosomal protein S13 [Corynebacterium variabile DSM 44702] Length = 122 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + ++ K I P+ R L + +V ++ I Sbjct: 1 MARLAGVDLPRDKRMEVALTYIYGIGPARAAELLEKTGISPDLRSKDLTDEQVSALKDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGTWKVEGDLRREVAADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297623299|ref|YP_003704733.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093] gi|297164479|gb|ADI14190.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093] Length = 126 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG SQ++ + + P+ RV L E+EV ++R+ + Sbjct: 1 MARIAGVDLPRDKRIEHALPYIYGIGLSRSQEVLAQAGVNPDTRVKDLAEAEVARLREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y+VEGDLRR + +NIKRLMD+G YRGLRHRRGLPVRGQ + TNARTRK + + Sbjct: 61 EKTYKVEGDLRREIQLNIKRLMDIGSYRGLRHRRGLPVRGQSSKTNARTRKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254452139|ref|ZP_05065576.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238] gi|198266545|gb|EDY90815.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238] Length = 122 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 79/122 (64%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRV AL YI GIG S+Q IC ++I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTAKRVPIALTYITGIGNTSAQAICEAVSIDVARRVNELSDAEVLAIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +YQVEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK K + Sbjct: 61 DANYQVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|293402525|ref|ZP_06646660.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304039|gb|EFE45293.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 121 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG +++ I K I + RV L + ++ IR + Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEQILAKTGISEDIRVKDLTDEQINAIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR VA+NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 DS-IKVEGDLRREVALNIKRLMEIGCYRGIRHRKGLPVRGQRTKTNARTRKGPVRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|220917145|ref|YP_002492449.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1] gi|254811122|sp|B8J884|RS13_ANAD2 RecName: Full=30S ribosomal protein S13 gi|219954999|gb|ACL65383.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1] Length = 128 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 72/120 (60%), Positives = 92/120 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG S++ I + + P R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V + Sbjct: 61 EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLVRK 120 >gi|182679001|ref|YP_001833147.1| 30S ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039] gi|226712696|sp|B2IF93|RS13_BEII9 RecName: Full=30S ribosomal protein S13 gi|182634884|gb|ACB95658.1| ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039] Length = 122 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +++IC K++IPPERRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGPKKAEEICEKVSIPPERRVVDLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226309833|ref|YP_002769727.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599] gi|254811132|sp|C0ZIK5|RS13_BREBN RecName: Full=30S ribosomal protein S13 gi|226092781|dbj|BAH41223.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599] Length = 122 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ I + + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVALTYIFGIGRPTSQKILSATGVDMNTRVRDLTEDEVNKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRLM++GC+RG+RHRRGLPVRGQR+ TNARTRK + + Sbjct: 61 DKTVKVEGDLRREISLNIKRLMEIGCFRGIRHRRGLPVRGQRSKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|111023122|ref|YP_706094.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1] gi|226365621|ref|YP_002783404.1| 30S ribosomal protein S13 [Rhodococcus opacus B4] gi|123045552|sp|Q0S3F0|RS13_RHOSR RecName: Full=30S ribosomal protein S13 gi|254811162|sp|C1B038|RS13_RHOOB RecName: Full=30S ribosomal protein S13 gi|110822652|gb|ABG97936.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1] gi|226244111|dbj|BAH54459.1| 30S ribosomal protein S13 [Rhodococcus opacus B4] Length = 124 Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + + P+ R L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325282665|ref|YP_004255206.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP] gi|324314474|gb|ADY25589.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP] Length = 125 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + I + R+ L E+E +R AI Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTRSREILERTGINADTRIKDLSEAEQSTLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y+VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQKTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|315925230|ref|ZP_07921444.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621464|gb|EFV01431.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC 23263] Length = 122 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S++I +L I P R L E EV +R + Sbjct: 1 MARIAGVDLPRNKRVEVGLTYIYGIGRSTSKEILAELKIDPNTRCKDLTEDEVNSLRNIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR V +NIKRL+++G YRG RHRRGLPVRGQ+T TNARTRK + Sbjct: 61 DEKYTVEGDLRREVNLNIKRLIEIGSYRGYRHRRGLPVRGQKTKTNARTRKGPKRTVGRS 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325068057|ref|ZP_08126730.1| 30S ribosomal protein S13 [Actinomyces oris K20] Length = 124 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I Sbjct: 1 MARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK + + Sbjct: 61 DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|229829401|ref|ZP_04455470.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM 14600] gi|229791832|gb|EEP27946.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM 14600] Length = 122 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS + + P+ RV L + EV +I AI Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRASSDAVLASANVDPDTRVKDLTDDEVKRISNAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ VEGDLRR A++IKRL ++GCYRG RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 EETLTVEGDLRRQTALDIKRLQEIGCYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|197303836|ref|ZP_03168872.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC 29176] gi|197297129|gb|EDY31693.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC 29176] Length = 127 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P+ RV L EV +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSADRILKDAGVNPDTRVRDLTSEEVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 66 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125 Query: 121 KR 122 K+ Sbjct: 126 KK 127 >gi|154483164|ref|ZP_02025612.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC 27560] gi|149735972|gb|EDM51858.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC 27560] Length = 127 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS+ I + + P+ R L + EV +I I Sbjct: 6 MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILTEAGVNPDTRCKDLTDDEVKKISDVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ T NARTRK + + Sbjct: 66 DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQNTKNNARTRKGPKRTVANK 125 Query: 121 KR 122 K+ Sbjct: 126 KK 127 >gi|146297260|ref|YP_001181031.1| 30S ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166231904|sp|A4XLQ5|RS13_CALS8 RecName: Full=30S ribosomal protein S13 gi|145410836|gb|ABP67840.1| SSU ribosomal protein S13P [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 124 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI GIG S+ I + P +RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRIEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++++VEG+LR +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK K GV Sbjct: 61 DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|162136028|ref|YP_533285.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB18] gi|158706368|sp|Q211H0|RS13_RHOPB RecName: Full=30S ribosomal protein S13 Length = 122 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ +I K+ I ++RV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|303233092|ref|ZP_07319765.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4] gi|308233882|ref|ZP_07664619.1| SSU ribosomal protein S13P [Atopobium vaginae DSM 15829] gi|328943589|ref|ZP_08241054.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829] gi|302480677|gb|EFL43764.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4] gi|327491558|gb|EGF23332.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829] Length = 123 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++G+G + +C + I P+ RV L E EV ++R I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGVGQTRATKVCAETGINPDTRVKDLTEDEVTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ EGDLRR V N RLM++GCYRGLRHR+GLPVRGQRTHTNARTRK + A+ Sbjct: 61 DANFTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGKRRQIGAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149922190|ref|ZP_01910628.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1] gi|149816930|gb|EDM76415.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1] Length = 123 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI+G+G +SQ+I K + R L E ++ IR+ I Sbjct: 1 MARISGVDLPRNKRVEIALTYIYGVGRTTSQEILVKAGVGGSIRTDDLNEEQLSAIRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY+VEGDLRR V IKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 ESDYKVEGDLRREVQTKIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPKRGQVAM 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|320533219|ref|ZP_08033933.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str. F0337] gi|326773988|ref|ZP_08233270.1| 30S ribosomal protein S13 [Actinomyces viscosus C505] gi|320134569|gb|EFW26803.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str. F0337] gi|326636127|gb|EGE37031.1| 30S ribosomal protein S13 [Actinomyces viscosus C505] Length = 136 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 83/121 (68%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I+ Sbjct: 14 ARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHID 73 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK + +K Sbjct: 74 GNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGKK 133 Query: 122 R 122 + Sbjct: 134 K 134 >gi|172040038|ref|YP_001799752.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109] gi|226712722|sp|B1VEX9|RS13_CORU7 RecName: Full=30S ribosomal protein S13 gi|171851342|emb|CAQ04318.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109] Length = 122 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLSDEQLAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENNWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291549396|emb|CBL25658.1| 30S ribosomal protein S13 [Ruminococcus torques L2-14] Length = 122 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++ I + P+ RV L EV +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSAERILKDAGVNPDTRVRDLTSEEVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K + + Sbjct: 61 DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|169830461|ref|YP_001716443.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C] gi|226712730|sp|B1I1M4|RS13_DESAP RecName: Full=30S ribosomal protein S13 gi|169637305|gb|ACA58811.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C] Length = 123 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV AL YI+GIG S++ + ++ + PE RV L E E+ ++R I Sbjct: 1 MARISGVDLPRDKRVEVALTYIYGIGRSSAKQLLEQVNVNPETRVRDLTEEEISRLRDLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR V++NIKRL+++G YRGLRHRRGLPV GQRT TNARTRK K GV Sbjct: 61 DKEYKVEGDLRREVSLNIKRLIEIGSYRGLRHRRGLPVWGQRTRTNARTRKGPKKTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|118591159|ref|ZP_01548558.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614] gi|118436235|gb|EAV42877.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614] Length = 126 Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats. Identities = 83/121 (68%), Positives = 95/121 (78%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRVV AL YIHGIG K +Q+I K I RRV++L ++EV+ IR+ I+ Sbjct: 6 ARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIIEKNNIDAARRVNELSDAEVLSIRETID 65 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 66 RDYLVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 125 Query: 122 R 122 + Sbjct: 126 K 126 >gi|154248693|ref|YP_001419651.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2] gi|226712806|sp|A7IPP8|RS13_XANP2 RecName: Full=30S ribosomal protein S13 gi|154162778|gb|ABS69994.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2] Length = 122 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++++I K+ IP ERRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKNAEEIVTKVGIPAERRVNQLTDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|213964843|ref|ZP_03393042.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46] gi|213952379|gb|EEB63762.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46] Length = 122 Score = 179 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG + ++ K I P+ R L + +V +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARANELLEKTGISPDLRTDALTDEQVAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|315652329|ref|ZP_07905321.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986] gi|315485452|gb|EFU75842.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986] Length = 122 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS+ I + + P+ RV L + EV ++ Q I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGLTSSRRILKEANVNPDTRVKDLTDDEVKELAQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 SDTQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227499171|ref|ZP_03929306.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21] gi|226904618|gb|EEH90536.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21] Length = 121 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG S++I K I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRDKRVEYALPYIYGIGLTLSREILEKTGINPDTRVRDLTEAEIAKLRELL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR ++NIKRL+++GCYRG RHR GLPVRGQ T NARTRK G + Sbjct: 61 DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKNVGGKK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|255326869|ref|ZP_05367945.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296] gi|283457574|ref|YP_003362157.1| 30S ribosomal protein S13 [Rothia mucilaginosa DY-18] gi|255296086|gb|EET75427.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296] gi|283133572|dbj|BAI64337.1| ribosomal protein S13 [Rothia mucilaginosa DY-18] Length = 122 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + + P+ RV L + E++ +R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|239623372|ref|ZP_04666403.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522338|gb|EEQ62204.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 122 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKKLATII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K K + Sbjct: 61 AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|166031633|ref|ZP_02234462.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC 27755] gi|166028610|gb|EDR47367.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC 27755] Length = 139 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 18 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAQAGVNPDIRCRDLTDDDVKKISAVI 77 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 78 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 137 Query: 121 KR 122 K+ Sbjct: 138 KK 139 >gi|73667207|ref|YP_303223.1| 30S ribosomal protein S13 [Ehrlichia canis str. Jake] gi|91207702|sp|Q3YRN0|RS13_EHRCJ RecName: Full=30S ribosomal protein S13 gi|72394348|gb|AAZ68625.1| SSU ribosomal protein S13P [Ehrlichia canis str. Jake] Length = 123 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 76/122 (62%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRVVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK K VA Sbjct: 61 RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159901448|ref|YP_001547695.1| 30S ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779] gi|226712747|sp|A9B434|RS13_HERA2 RecName: Full=30S ribosomal protein S13 gi|159894487|gb|ABX07567.1| ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779] Length = 127 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV +L YI+GIG +S +I + I P RV L E EVI++R+ I Sbjct: 1 MARISGVDIPRNKRVEISLTYIYGIGRTTSTEILARTNINPNVRVKDLTEDEVIRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +QDY VEGDLRR V +NIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTR+ + Sbjct: 61 DQDYTVEGDLRRAVQLNIKRLMDIGCYRGIRHRKGLPLRGQRTKTNARTRRGKKGAAIGG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|261415796|ref|YP_003249479.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372252|gb|ACX74997.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328112|gb|ADL27313.1| ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 122 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ K V L I+G+G ++ +C +L I ++ L E E +IR + Sbjct: 1 MARIAGVDLPKNKTVEYGLTAIYGVGLFTANKVCAQLGIDKNKKCDDLTEEEQGKIRHLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEG LR V +NIKRL D+GCYRG+RHR+GLPVRGQR+ TNARTRK K + Sbjct: 61 EDEYSVEGQLRAEVTLNIKRLQDIGCYRGIRHRKGLPVRGQRSRTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226323037|ref|ZP_03798555.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758] gi|225208604|gb|EEG90958.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758] Length = 135 Score = 179 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + EV +I I Sbjct: 14 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAEAGVNPDTRCRDLTDDEVKKISAVI 73 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 74 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 133 Query: 121 KR 122 K+ Sbjct: 134 KK 135 >gi|220921921|ref|YP_002497222.1| 30S ribosomal protein S13 [Methylobacterium nodulans ORS 2060] gi|254811155|sp|B8IT33|RS13_METNO RecName: Full=30S ribosomal protein S13 gi|219946527|gb|ACL56919.1| ribosomal protein S13 [Methylobacterium nodulans ORS 2060] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|253580645|ref|ZP_04857909.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39B_FAA] gi|251848016|gb|EES75982.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39BFAA] gi|291548008|emb|CBL21116.1| 30S ribosomal protein S13 [Ruminococcus sp. SR1/5] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I K + P+ RV L + EV ++ I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAKAEVNPDTRVRDLTDDEVKRLSAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227487077|ref|ZP_03917393.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541759|ref|ZP_03971808.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51866] gi|227093151|gb|EEI28463.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182465|gb|EEI63437.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC 51866] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAKKLLEETGISPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK K + Sbjct: 61 EASWKVEGDLRRQVAADIRRKIEIGCYQGMRHRRGLPVHGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225020481|ref|ZP_03709673.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii ATCC 33806] gi|305679948|ref|ZP_07402758.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266] gi|224946870|gb|EEG28079.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii ATCC 33806] gi|305660568|gb|EFM50065.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLKETGISPDLRTDNLTDEQIASLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|160881760|ref|YP_001560728.1| ribosomal protein S13 [Clostridium phytofermentans ISDg] gi|189040498|sp|A9KJG9|RS13_CLOPH RecName: Full=30S ribosomal protein S13 gi|160430426|gb|ABX43989.1| ribosomal protein S13 [Clostridium phytofermentans ISDg] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG SS I K + P+ RV L + EV +IR I Sbjct: 1 MARISGVDLPREKRIEIGLTYVYGIGRVSSNRILAKAGVNPDTRVRDLTDEEVAKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETMLVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302876508|ref|YP_003845141.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] gi|307687180|ref|ZP_07629626.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] gi|302579365|gb|ADL53377.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KRV AL YI+GIG +SQ I ++ + P+ RV L E EV +R I Sbjct: 1 MARIAGIDIPKEKRVEIALTYIYGIGLPTSQRILSETGVNPDTRVKNLTEDEVNLLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR +A+NIKRL+++GCYRG+RHRR LPVRGQ+T TNARTRK K + Sbjct: 61 NKTVKVEGDLRREIALNIKRLVEIGCYRGIRHRRNLPVRGQKTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|315497995|ref|YP_004086799.1| 30S ribosomal protein s13 [Asticcacaulis excentricus CB 48] gi|315416007|gb|ADU12648.1| 30S ribosomal protein S13 [Asticcacaulis excentricus CB 48] Length = 122 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG + +++I K+ I RRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQQKAKEIVEKVGIEDARRVNSLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|303247015|ref|ZP_07333291.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ] gi|302491722|gb|EFL51605.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ] Length = 123 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG ++ I + + L E IR+ I Sbjct: 1 MARIAGVDLPKNKRMDIALTYIYGIGRTTALTILEASGVDWTKNSDALTPEETNTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V NIKRLMD+GCYRG RHRRGLP RGQRTHTNARTRK +G +A+ Sbjct: 61 EANHKVEGDLRRDVTANIKRLMDIGCYRGFRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297567259|ref|YP_003686231.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946] gi|296851708|gb|ADH64723.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946] Length = 126 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV IPR KRV AL YI G+G+ +++ + P RV L E+EV ++R+ I Sbjct: 1 MARIAGVEIPRNKRVDVALTYIFGVGWSRAKEALAATNVDPATRVKDLSEAEVARLREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y++EG+LR +A NIKRLMD+GCYRGLRHRRGLPVRGQRT TNAR+RK K + Sbjct: 61 ENTYKLEGELRAEIAGNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARSRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|304405591|ref|ZP_07387250.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9] gi|304345630|gb|EFM11465.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +++ I + + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALQYIFGIGQTTAKKILATTGVDAQTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227549865|ref|ZP_03979914.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291] gi|227078120|gb|EEI16083.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEIALTYIYGIGATRSKELLEKTGISPDLRTDNLTDDQLAALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ESSYTVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|283796528|ref|ZP_06345681.1| 30S ribosomal protein S13 [Clostridium sp. M62/1] gi|291075942|gb|EFE13306.1| 30S ribosomal protein S13 [Clostridium sp. M62/1] gi|295092571|emb|CBK78678.1| 30S ribosomal protein S13 [Clostridium cf. saccharolyticum K10] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASSNRILAEAGVNPDTRVKDLTDDEVKKLAAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 ADTQVVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|332186879|ref|ZP_08388621.1| 30S ribosomal protein S13 [Sphingomonas sp. S17] gi|332013212|gb|EGI55275.1| 30S ribosomal protein S13 [Sphingomonas sp. S17] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG +++I KL I +RRV L + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGPAKAKEITAKLNIAADRRVQDLSDQEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|19551796|ref|NP_599798.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|62389451|ref|YP_224853.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|145294732|ref|YP_001137553.1| 30S ribosomal protein S13 [Corynebacterium glutamicum R] gi|32363343|sp|Q8NSV6|RS13_CORGL RecName: Full=30S ribosomal protein S13 gi|158706225|sp|A4QBQ4|RS13_CORGB RecName: Full=30S ribosomal protein S13 gi|21323326|dbj|BAB97954.1| Ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032] gi|41324785|emb|CAF19267.1| RIBOSOMAL PROTEIN S13 [Corynebacterium glutamicum ATCC 13032] gi|140844652|dbj|BAF53651.1| hypothetical protein [Corynebacterium glutamicum R] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLEETGISPDLRTDNLTDEQIAALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGTWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|309777156|ref|ZP_07672119.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53] gi|313897276|ref|ZP_07830820.1| 30S ribosomal protein S13 [Clostridium sp. HGF2] gi|308915026|gb|EFP60803.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53] gi|312957997|gb|EFR39621.1| 30S ribosomal protein S13 [Clostridium sp. HGF2] Length = 121 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG +S+ I K I + RV L E +V IR I Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRSTSEKILAKTGISEDIRVKDLTEDQVNAIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 D-GVKVEGDLRREVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPVRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|161610771|ref|NP_948567.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009] gi|192292014|ref|YP_001992619.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris TIE-1] gi|226712784|sp|B3QBV7|RS13_RHOPT RecName: Full=30S ribosomal protein S13 gi|192285763|gb|ACF02144.1| ribosomal protein S13 [Rhodopseudomonas palustris TIE-1] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|119373301|gb|ABL68894.1| SSU ribosomal protein S13P [Paracoccus denitrificans PD1222] Length = 128 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 78/121 (64%), Positives = 92/121 (76%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I+ Sbjct: 8 ARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYID 67 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + VEGDLRR MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 68 ANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 127 Query: 122 R 122 + Sbjct: 128 K 128 >gi|295109499|emb|CBL23452.1| 30S ribosomal protein S13 [Ruminococcus obeum A2-162] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + +V +I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRASADKILAQAGVNPDIRVRDLTDDDVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225376435|ref|ZP_03753656.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM 16841] gi|225211811|gb|EEG94165.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM 16841] Length = 128 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P R L + EV +I + I Sbjct: 7 MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILAEANVDPNTRCRDLTDDEVKRISEVI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 67 DNTQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 126 Query: 121 KR 122 K+ Sbjct: 127 KK 128 >gi|323136109|ref|ZP_08071192.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242] gi|322399200|gb|EFY01719.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++IC K+ IP ERRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEICEKVNIPAERRVAQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|14278542|pdb|1I94|M Chain M, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 gi|14278563|pdb|1I95|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine gi|14278584|pdb|1I96|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With The Translation Initiation Factor If3 (C-Terminal Domain) gi|14278606|pdb|1I97|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Tetracycline gi|34811541|pdb|1PNS|M Chain M, Crystal Structure Of A Streptomycin Dependent Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pns, Contains The 30s Subunit, Two Trnas, And One Mrna Molecule. The 50s Ribosomal Subunit Is In File 1pnu. gi|34811597|pdb|1PNX|M Chain M, Crystal Structure Of The Wild Type Ribosome From E. Coli, 30s Subunit Of 70s Ribosome. This File, 1pnx, Contains Only Molecules Of The 30s Ribosomal Subunit. The 50s Subunit Is In The Pdb File 1pny. gi|56966335|pdb|1VOQ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966388|pdb|1VOS|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966441|pdb|1VOV|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966494|pdb|1VOX|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|56966547|pdb|1VOZ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia Coli In Complex With Protein Y. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Five 70s Ribosomes And Is Described In Remark 400. gi|149241287|pdb|2E5L|M Chain M, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via The Shine- Dalgarno Interaction gi|170292340|pdb|2R1G|I Chain I, Coordinates Of The Thermus Thermophilus 30s Components Neighboring Rbfa As Obtained By Fitting Into The Cryo-Em Map Of A 30s-Rbfa Complex gi|224510701|pdb|3FIC|M Chain M, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A 6.4 A Cryo-Em Map. This File Contains The 30s Subunit And The Ligands gi|226887641|pdb|2ZM6|M Chain M, Crystal Structure Of The Thermus Thermophilus 30s Ribosomal Subunit Length = 125 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 71/121 (58%), Positives = 88/121 (72%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K +K Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKK 120 Query: 122 R 122 + Sbjct: 121 K 121 >gi|330993870|ref|ZP_08317802.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1] gi|329759138|gb|EGG75650.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1] Length = 125 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 81/122 (66%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YI+GIG +Q IC++L IP ERRV++L + E+ +IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIALRYIYGIGATKAQAICDQLEIPAERRVNELSDDEIGKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK + Sbjct: 61 DSNYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300932969|ref|ZP_07148225.1| 30S ribosomal protein S13 [Corynebacterium resistens DSM 45100] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|160932175|ref|ZP_02079566.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753] gi|156868777|gb|EDO62149.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG K++ +I + P+ RV L E +V ++R+ I Sbjct: 1 MARIAGVDLPRDKRIEIGLSYIYGIGRKTATEILKATGVNPDTRVRDLTEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +VEGDLRR VA +IKRL+++GCYRG+RHR+GLPVRGQR+ TNARTRK K + Sbjct: 61 DHNCRVEGDLRRDVAFDIKRLIEIGCYRGVRHRKGLPVRGQRSKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|95930499|ref|ZP_01313235.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684] gi|95133539|gb|EAT15202.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG +SQ I ++ + R L E+EV QIR+ I Sbjct: 1 MARIAGIDLPKNKRIEVALTYIYGIGRSTSQHILSQAGVDFSTRSDDLTEAEVGQIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +VEGDLRR V+MNIKR+MDLG YRGLRHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 DDELKVEGDLRREVSMNIKRMMDLGNYRGLRHRRGLPVRGQKTKTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|299135235|ref|ZP_07028426.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2] gi|298590212|gb|EFI50416.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGQKNAADIMEKVKIPLDRRVSQLSDAEVLQIREMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|317131395|ref|YP_004090709.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3] gi|315469374|gb|ADU25978.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV L YI GIG KS+ DI I P+ RV L E +V +R I Sbjct: 1 MARIAGVNLPNEKRVEIGLTYIFGIGRKSADDIIKATGINPDIRVKDLTEEQVSLLRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DKEYTIEGDLRRRVALNIKRLVEVGCYRGVRHRKGLPVRGQRTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300022563|ref|YP_003755174.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888] gi|299524384|gb|ADJ22853.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888] Length = 125 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV AL YIHGIG K S++IC K +IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTGKRVEIALRYIHGIGPKFSKEICAKCSIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK + Sbjct: 61 DRDYTVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGKAVPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] gi|262183874|ref|ZP_06043295.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] gi|254811143|sp|C3PL35|RS13_CORA7 RecName: Full=30S ribosomal protein S13 gi|227453286|gb|ACP32039.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPARAKELLEKTGISPDLRTDNLDDDQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227494570|ref|ZP_03924886.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436] gi|226832304|gb|EEH64687.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E +++++R+ I Sbjct: 1 MARIAGVDLPREKRMEIALTYIYGVGRTRAAETLEATGVSPDLRVKDATEEDLVKLREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218135256|ref|ZP_03464060.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC 43243] gi|217990641|gb|EEC56652.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC 43243] Length = 123 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 68/123 (55%), Positives = 85/123 (69%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I + + P+ RV L + EV +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILAEAQVNPDTRVRDLTDEEVAKIRDVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E D VEGDLRR +AMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART K K Sbjct: 61 ENDNILVEGDLRRDIAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNARTCKGPKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|126697666|ref|YP_001086563.1| 30S ribosomal protein S13 [Clostridium difficile 630] gi|254973757|ref|ZP_05270229.1| 30S ribosomal protein S13 [Clostridium difficile QCD-66c26] gi|255091147|ref|ZP_05320625.1| 30S ribosomal protein S13 [Clostridium difficile CIP 107932] gi|255099258|ref|ZP_05328235.1| 30S ribosomal protein S13 [Clostridium difficile QCD-63q42] gi|255305041|ref|ZP_05349213.1| 30S ribosomal protein S13 [Clostridium difficile ATCC 43255] gi|255312801|ref|ZP_05354384.1| 30S ribosomal protein S13 [Clostridium difficile QCD-76w55] gi|255515560|ref|ZP_05383236.1| 30S ribosomal protein S13 [Clostridium difficile QCD-97b34] gi|255648655|ref|ZP_05395557.1| 30S ribosomal protein S13 [Clostridium difficile QCD-37x79] gi|255654188|ref|ZP_05399597.1| 30S ribosomal protein S13 [Clostridium difficile QCD-23m63] gi|260681872|ref|YP_003213157.1| 30S ribosomal protein S13 [Clostridium difficile CD196] gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291] gi|296449773|ref|ZP_06891542.1| 30S ribosomal protein S13 [Clostridium difficile NAP08] gi|296877837|ref|ZP_06901859.1| 30S ribosomal protein S13 [Clostridium difficile NAP07] gi|306518778|ref|ZP_07405125.1| 30S ribosomal protein S13 [Clostridium difficile QCD-32g58] gi|123174671|sp|Q18CI0|RS13_CLOD6 RecName: Full=30S ribosomal protein S13 gi|115249103|emb|CAJ66914.1| 30S ribosomal protein S13 [Clostridium difficile] gi|260208035|emb|CBA60233.1| 30S ribosomal protein S13 [Clostridium difficile CD196] gi|260211486|emb|CBE01623.1| 30S ribosomal protein S13 [Clostridium difficile R20291] gi|296261371|gb|EFH08197.1| 30S ribosomal protein S13 [Clostridium difficile NAP08] gi|296431137|gb|EFH16962.1| 30S ribosomal protein S13 [Clostridium difficile NAP07] Length = 123 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG ++ +I K I P+ R+ L E +V ++R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQRT TNARTRK K + Sbjct: 61 DDDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTNARTRKGPRKTVSRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226305367|ref|YP_002765325.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4] gi|229489477|ref|ZP_04383340.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121] gi|259494688|sp|C0ZW51|RS13_RHOE4 RecName: Full=30S ribosomal protein S13 gi|226184482|dbj|BAH32586.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4] gi|229323574|gb|EEN89332.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121] Length = 124 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KR+ AL YI+GIG S++I + + P+ R L + ++ ++R+ I Sbjct: 1 MARLSGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226356868|ref|YP_002786608.1| 30S ribosomal protein S13 [Deinococcus deserti VCD115] gi|259494671|sp|C1CXD7|RS13_DEIDV RecName: Full=30S ribosomal protein S13 gi|226318858|gb|ACO46854.1| putative 30S ribosomal protein S13 [Deinococcus deserti VCD115] Length = 126 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+++ + I + RV L E+E +R AI Sbjct: 1 MARVAGVDLPREKRIEIALTYIYGIGLTRSKEVLAQTGISADTRVKNLTEAEQSTLRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ ++VEGDLR V NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EKTFKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|268316432|ref|YP_003290151.1| 30S ribosomal protein S13 [Rhodothermus marinus DSM 4252] gi|262333966|gb|ACY47763.1| ribosomal protein S13 [Rhodothermus marinus DSM 4252] Length = 126 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+IP KR AL I+GIG +++I +++ + P R E + +IR+ I Sbjct: 1 MPRIAGVDIPLHKRGEIALTAIYGIGKSRAKEILSRVGLDPNTRPKDWTEEQTREIRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+Y VEG LR + MNIKRLMD+GCYRG+RHR GLPVRGQRT TNARTRK K + Sbjct: 61 EQEYVVEGQLRAEIQMNIKRLMDIGCYRGIRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294010567|ref|YP_003544027.1| ribosomal protein S13 [Sphingobium japonicum UT26S] gi|292673897|dbj|BAI95415.1| ribosomal protein S13 [Sphingobium japonicum UT26S] Length = 122 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI +KL I RRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHSRRVQDLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307946309|ref|ZP_07661644.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4] gi|307769973|gb|EFO29199.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4] Length = 122 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 83/122 (68%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K +Q+I K I RRV++L ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALQYIHGIGAKFAQEIVEKNNIDAARRVNELSDAEVLSIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|310829559|ref|YP_003961916.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612] gi|308741293|gb|ADO38953.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612] Length = 122 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I +L I P+ RV L E+EV +R + Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIYGIGRPTSNKILKELNINPDTRVKDLTENEVNALRNIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR V +NIKRL+++G YRGLRHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 DEKYTVEGDLRREVNLNIKRLIEIGSYRGLRHRRGLPVRGQKTKTNARTRKGPKKTVGRK 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|261338255|ref|ZP_05966139.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093] gi|270276909|gb|EFA22763.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093] Length = 125 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNDKRIEIALTYIFGVGRTRAKETLAATGINPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 ESNYKIEGDLRREIDADIRRKIQINCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153854995|ref|ZP_01996208.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814] gi|149752492|gb|EDM62423.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814] Length = 127 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 6 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDDDVKKISAVI 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 66 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 125 Query: 121 KR 122 K+ Sbjct: 126 KK 127 >gi|258542049|ref|YP_003187482.1| 30S ribosomal protein S13 [Acetobacter pasteurianus IFO 3283-01] gi|256633127|dbj|BAH99102.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01] gi|256636184|dbj|BAI02153.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-03] gi|256639239|dbj|BAI05201.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-07] gi|256642293|dbj|BAI08248.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-22] gi|256645348|dbj|BAI11296.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-26] gi|256648403|dbj|BAI14344.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-32] gi|256651456|dbj|BAI17390.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654447|dbj|BAI20374.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-12] Length = 125 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV L YI+GIG + +IC L IP +RV++L + E++++R+ I Sbjct: 1 MARIAGVNVPTNKRVVIGLQYIYGIGATKAVEICKALEIPEAKRVNELSDDEILKLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK + Sbjct: 61 DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|317485799|ref|ZP_07944663.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6] gi|316922905|gb|EFV44127.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6] Length = 122 Score = 178 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR AL YI+GIG ++ I + + R + L E+ ++R+ + Sbjct: 1 MARIAGVDLPRGKRADIALTYIYGIGRVTALKILDASGVNWTRGIDDLTAEELNEVRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ Y+VEGDLRR ++MNIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK +G V + Sbjct: 61 EQSYKVEGDLRREISMNIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRRGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|266620237|ref|ZP_06113172.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479] gi|288868141|gb|EFD00440.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 ADSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|229542179|ref|ZP_04431239.1| ribosomal protein S13 [Bacillus coagulans 36D1] gi|229326599|gb|EEN92274.1| ribosomal protein S13 [Bacillus coagulans 36D1] Length = 121 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + I + RV L E EV +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAQKILAEAGISEDTRVRDLTEDEVNKIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|297571897|ref|YP_003697671.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595] gi|296932244|gb|ADH93052.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595] Length = 124 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG +Q+ + P+ RV L E ++++++ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGLTRAQESLAATGVNPDTRVKDLTEDDLVKLKNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DENYKVEGDLRREIQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|85374441|ref|YP_458503.1| 30S ribosomal protein S13 [Erythrobacter litoralis HTCC2594] gi|122544188|sp|Q2N9D5|RS13_ERYLH RecName: Full=30S ribosomal protein S13 gi|84787524|gb|ABC63706.1| ribosomal protein S13 [Erythrobacter litoralis HTCC2594] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL I RRV L + EV+++R+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTTAVKIADKLGIDHARRVQDLTDEEVLRLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D VEGDLRR AMNIKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K + Sbjct: 61 DEDLMVEGDLRRETAMNIKRLMDLKSYRGLRHRNGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|68536851|ref|YP_251556.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411] gi|260579209|ref|ZP_05847099.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734] gi|91207697|sp|Q4JTB9|RS13_CORJK RecName: Full=30S ribosomal protein S13 gi|68264450|emb|CAI37938.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411] gi|258602695|gb|EEW15982.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ K I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENTWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296394893|ref|YP_003659777.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985] gi|296182040|gb|ADG98946.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985] Length = 124 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + P+ R L ++ V Q+R+ I Sbjct: 1 MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDANVAQLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238922854|ref|YP_002936367.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656] gi|259494677|sp|C4ZBU3|RS13_EUBR3 RecName: Full=30S ribosomal protein S13 gi|238874526|gb|ACR74233.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656] gi|291523754|emb|CBK89341.1| 30S ribosomal protein S13 [Eubacterium rectale DSM 17629] gi|291528780|emb|CBK94366.1| 30S ribosomal protein S13 [Eubacterium rectale M104/1] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + P RV L + EV +I I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILEAANVDPSTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254517496|ref|ZP_05129552.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA] gi|226911245|gb|EEH96446.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA] Length = 121 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG +S I + + P+ RV L E EV +IR+ + Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLSTSHKILAETGVNPDTRVRDLTEEEVTKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 -KTLTIEGDLRREVALNIKRLVEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|167759836|ref|ZP_02431963.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704] gi|167662455|gb|EDS06585.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ R L + +V +I I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDEDVKKISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302336356|ref|YP_003801563.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084] gi|301320196|gb|ADK68683.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084] Length = 123 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG S+ +C + + P+ RV L E EV +IR I Sbjct: 1 MARINGVDLPREKRVEVGLTYLYGIGQTSATKVCAETGVNPDTRVKDLTEDEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ EGDLRR V N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK + AR Sbjct: 61 DANFTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQIGAR 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|160941045|ref|ZP_02088383.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC BAA-613] gi|158435994|gb|EDP13761.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC BAA-613] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASSNRILTAAGVNPDTRVKDLTDDEVKKLANTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K K + Sbjct: 61 AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|121602910|ref|YP_989019.1| 30S ribosomal protein S13 [Bartonella bacilliformis KC583] gi|158706337|sp|A1USR6|RS13_BARBK RecName: Full=30S ribosomal protein S13 gi|120615087|gb|ABM45688.1| ribosomal protein S13 [Bartonella bacilliformis KC583] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+V AL YIHGIG K + I K+ IP ERRVH+L +SE++QIR+ I Sbjct: 1 MARIAGVNIPTNKRLVIALQYIHGIGEKFAHKIIEKVGIPAERRVHELSDSEILQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DYQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK + + Sbjct: 61 DRDYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPARAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307294933|ref|ZP_07574775.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1] gi|306879407|gb|EFN10625.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ D+ +KL I RRV L ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDLADKLGIDHSRRVQDLSDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|189424434|ref|YP_001951611.1| ribosomal protein S13 [Geobacter lovleyi SZ] gi|226712742|sp|B3E854|RS13_GEOLS RecName: Full=30S ribosomal protein S13 gi|189420693|gb|ACD95091.1| ribosomal protein S13 [Geobacter lovleyi SZ] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR+ AL YI+GIG ++++I +I R +L E+E+ ++R+ I Sbjct: 1 MARIAGIDLPKNKRIEIALTYIYGIGRTTAKNILVATSIDGSTRTDKLTEAEIGKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK + + Sbjct: 61 DKNVKVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255526604|ref|ZP_05393511.1| ribosomal protein S13 [Clostridium carboxidivorans P7] gi|296187293|ref|ZP_06855689.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7] gi|255509712|gb|EET86045.1| ribosomal protein S13 [Clostridium carboxidivorans P7] gi|296048164|gb|EFG87602.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7] Length = 123 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/113 (56%), Positives = 85/113 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S I ++ + P+ RV L E EV +R + Sbjct: 1 MARIAGVDLPKEKRVEIGLTYIYGIGLPTSHKILSETGVNPDIRVKDLSEEEVNALRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNVKVEGDLRREIALNIKRLIEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 113 >gi|164686551|ref|ZP_02210579.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM 16795] gi|164604420|gb|EDQ97885.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM 16795] Length = 123 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR L YI+GIG ++ +I K I P+ R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPNEKRAEIGLTYIYGIGRATANEILAKAEINPDTRIKDLSEEEVNTLRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK K + Sbjct: 61 DNDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|262203543|ref|YP_003274751.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247] gi|262086890|gb|ACY22858.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G +S++I + P+ R L +++V ++R+ I Sbjct: 1 MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILEGTGLSPDLRAKDLTDADVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260886900|ref|ZP_05898163.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|330839302|ref|YP_004413882.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|260863499|gb|EEX77999.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] gi|329747066|gb|AEC00423.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185] Length = 124 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +SQ + + P+ R L E EV+++R I Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTTSQKLLKLAGVNPDTRTRDLTEDEVVKLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ VEGDLRR M IKRL+D+GCYRG RHR GLPVRGQ T NARTRK K + Sbjct: 61 DKEAIVEGDLRRERQMAIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225387213|ref|ZP_03756977.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme DSM 15981] gi|225046692|gb|EEG56938.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme DSM 15981] Length = 122 Score = 178 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + + P+ RV L + EV ++ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSANRILTEAGVNPDTRVKDLTDDEVKKLATII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +A+NIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K K + Sbjct: 61 ADTQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291562747|emb|CBL41563.1| 30S ribosomal protein S13 [butyrate-producing bacterium SS3/4] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S+ I + P+ RV L + EV I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRASADRILAAAGVNPDTRVKDLTDDEVKNIAAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +A+NIKRL ++GCYRG+RHR+ LP RGQ+T TNART K K + Sbjct: 61 AETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPCRGQKTKTNARTCKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255324776|ref|ZP_05365890.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum SK141] gi|311740033|ref|ZP_07713867.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC 33035] gi|255298251|gb|EET77554.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum SK141] gi|311305106|gb|EFQ81175.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC 33035] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + ++ +R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EATWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300857222|ref|YP_003782206.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528] gi|300437337|gb|ADK17104.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528] Length = 125 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG +SQ I + + P+ RV L E EV +R + Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLSTSQKILKEAGVNPDTRVKDLTEEEVNSLRNYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +EGDLRR +A+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 -KNVTIEGDLRREIALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKMVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|329114196|ref|ZP_08242958.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001] gi|326696272|gb|EGE47951.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001] Length = 125 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRVV L YI+GIG + +IC L IP +RV++L + E++++R+ I Sbjct: 1 MARIAGVNVPTNKRVVIGLQYIYGIGATKAAEICKALEIPEAKRVNELSDDEILKVRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK + Sbjct: 61 DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|261409495|ref|YP_003245736.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10] gi|315649673|ref|ZP_07902757.1| 30S ribosomal protein S13 [Paenibacillus vortex V453] gi|261285958|gb|ACX67929.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10] gi|315274861|gb|EFU38237.1| 30S ribosomal protein S13 [Paenibacillus vortex V453] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI GIG +SQ + + I + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKVLKETGINADTRVRDLTEDEVSKLRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DGMVKVEGDLRREISLNIKRLTEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257784938|ref|YP_003180155.1| 30S ribosomal protein S13 [Atopobium parvulum DSM 20469] gi|257473445|gb|ACV51564.1| ribosomal protein S13 [Atopobium parvulum DSM 20469] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG + +CN+ I RV L E EV +IR I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGIGQTRATKVCNETGIDVNTRVKDLTEEEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y EGDLRR V N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK + + Sbjct: 61 DANYTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQVGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170760916|ref|YP_001788795.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch Maree] gi|226712720|sp|B1KSJ9|RS13_CLOBM RecName: Full=30S ribosomal protein S13 gi|169407905|gb|ACA56316.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch Maree] Length = 123 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KRV L YI+GIG +SQ+I + P+ RV L E EV IR + Sbjct: 1 MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILEATGVNPDTRVKDLSEEEVNAIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK + + Sbjct: 61 NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGPKRAIGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|88658171|ref|YP_507248.1| 30S ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas] gi|123493519|sp|Q2GH35|RS13_EHRCR RecName: Full=30S ribosomal protein S13 gi|88599628|gb|ABD45097.1| ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas] Length = 123 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+V AL YI+GIG + IC I RV L + E+I+IR I Sbjct: 1 MARIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK K VA Sbjct: 61 RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257413860|ref|ZP_04744453.2| 30S ribosomal protein S13 [Roseburia intestinalis L1-82] gi|257202000|gb|EEV00285.1| 30S ribosomal protein S13 [Roseburia intestinalis L1-82] gi|291537906|emb|CBL11017.1| 30S ribosomal protein S13 [Roseburia intestinalis XB6B4] Length = 128 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +I I Sbjct: 7 MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 66 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 67 DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 126 Query: 121 KR 122 K+ Sbjct: 127 KK 128 >gi|217979115|ref|YP_002363262.1| 30S ribosomal protein S13 [Methylocella silvestris BL2] gi|254811156|sp|B8EIT3|RS13_METSB RecName: Full=30S ribosomal protein S13 gi|217504491|gb|ACK51900.1| ribosomal protein S13 [Methylocella silvestris BL2] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++IC K+ IP RRV +L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGSKKAEEICAKVNIPDARRVSELTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|320094555|ref|ZP_08026321.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. F0338] gi|319978470|gb|EFW10047.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str. F0338] Length = 124 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+G+G + + + P+ RV E E++++R I Sbjct: 1 MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|167645600|ref|YP_001683263.1| 30S ribosomal protein S13 [Caulobacter sp. K31] gi|189040494|sp|B0T2E4|RS13_CAUSK RecName: Full=30S ribosomal protein S13 gi|167348030|gb|ABZ70765.1| ribosomal protein S13 [Caulobacter sp. K31] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 81/122 (66%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS++DI K+ I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSARDIVTKVGIDDARRVNQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+ VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DKDFTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291298739|ref|YP_003510017.1| 30S ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728] gi|290567959|gb|ADD40924.1| ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728] Length = 126 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S + C I P +RVH+L ++E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRSVETCAATGIDPSKRVHELTDAELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 EGNYQVEGDLRREVAADIRRKVEIGCYQGIRHRRGLPVHGQRTRTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307244743|ref|ZP_07526844.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678] gi|306491841|gb|EFM63893.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I P+ R+ +L E +V ++R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGINPDTRIKELSEDQVNELRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK K + Sbjct: 61 DEDHLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260438191|ref|ZP_05792007.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876] gi|292809381|gb|EFF68586.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SS I + + P RV L + EV +I+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVSSNRILAEAKVDPNTRVKDLTDEEVGRIKDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|306835267|ref|ZP_07468299.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726] gi|304568860|gb|EFM44393.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG ++++ K I P+ R L + +V +R AI Sbjct: 1 MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGSWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291535453|emb|CBL08565.1| 30S ribosomal protein S13 [Roseburia intestinalis M50/1] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SS I + P+ RV L + EV +I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|323483275|ref|ZP_08088665.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum WAL-14163] gi|323691226|ref|ZP_08105502.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673] gi|323403373|gb|EGA95681.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum WAL-14163] gi|323504745|gb|EGB20531.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSTRILAEAGVNPDTRVKDLTDDEVKRIAGVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 AESQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|77918339|ref|YP_356154.1| 30S ribosomal protein S13 [Pelobacter carbinolicus DSM 2380] gi|91207711|sp|Q3A6M3|RS13_PELCD RecName: Full=30S ribosomal protein S13 gi|77544422|gb|ABA87984.1| SSU ribosomal protein S13P [Pelobacter carbinolicus DSM 2380] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 75/122 (61%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL YI+GIG SSQDI K + P R +L E+E QIR I Sbjct: 1 MARIAGIDLPRNKRIEVALTYIYGIGRSSSQDILQKAGVDPNTRTDELTEAEAGQIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + QVEGDLRR V NIKRLMDLGCYRGLRHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 DGQMQVEGDLRRVVTGNIKRLMDLGCYRGLRHRRGLPVRGQKTKTNARTRKGPRKTVAGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|304391477|ref|ZP_07373419.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130] gi|303295706|gb|EFL90064.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130] Length = 122 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR V AL YIHGIG K++ +I K IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRTVIALQYIHGIGQKNANEIVTKANIPMERRVNQLTDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DADYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|160914537|ref|ZP_02076752.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991] gi|158433695|gb|EDP11984.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991] Length = 121 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 91/122 (74%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI+GIG ++++I K+ I + RV L E +V IR+ + Sbjct: 1 MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEEILAKVGISEDIRVKDLSEEQVNAIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DT-IKVEGDLRRDVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPVRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|325678627|ref|ZP_08158237.1| 30S ribosomal protein S13 [Ruminococcus albus 8] gi|324109677|gb|EGC03883.1| 30S ribosomal protein S13 [Ruminococcus albus 8] Length = 122 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL Y++GIG K++ I + + P+ RV + E +V ++R+ I Sbjct: 1 MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|221195396|ref|ZP_03568451.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626] gi|221184583|gb|EEE16975.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L Y++GIG + IC + + + RV L E EV +IR I Sbjct: 1 MARINGVDLPRDKRVEVGLTYLYGIGQTRATKICAETGVNVDTRVKDLTEDEVTKIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y EGDLRR V N RLM++GCYRGLRHR+GLPV GQRTHTNARTRK + + Sbjct: 61 DANYTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQVGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|241889158|ref|ZP_04776462.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379] gi|241864407|gb|EER68785.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379] Length = 121 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L E ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTEDQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK K + Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|28212157|ref|NP_783101.1| 30S ribosomal protein S13 [Clostridium tetani E88] gi|32363299|sp|Q890Q7|RS13_CLOTE RecName: Full=30S ribosomal protein S13 gi|28204601|gb|AAO37038.1| SSU ribosomal protein S13P [Clostridium tetani E88] Length = 123 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG S++ I + + P+ R+ L E EV +R I Sbjct: 1 MARIAGIDLPREKRVEVGLTYIFGIGTSSAKKILKETGVNPDIRIKDLSEEEVNLLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q+ +VEGDLRR VA++IKRL ++G YRG+RHRRGLPVRGQ+T TNARTRK K V+R Sbjct: 61 NQNLKVEGDLRRDVALDIKRLKEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKLVVSR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269218965|ref|ZP_06162819.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. F0332] gi|269212076|gb|EEZ78416.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str. F0332] Length = 123 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI+GIG S + I P+ RV L E +++ +++ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIYGIGRTRSAETLAATGISPDVRVRDLTEDQLVALKKHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DENYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148260917|ref|YP_001235044.1| 30S ribosomal protein S13 [Acidiphilium cryptum JF-5] gi|326404315|ref|YP_004284397.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301] gi|166231896|sp|A5FZU3|RS13_ACICJ RecName: Full=30S ribosomal protein S13 gi|146402598|gb|ABQ31125.1| SSU ribosomal protein S13P [Acidiphilium cryptum JF-5] gi|325051177|dbj|BAJ81515.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301] Length = 125 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 78/122 (63%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ +L YI+GIG +++IC L I ++RV+QL E E+++IR+ I Sbjct: 1 MARIAGVNIPSNKRVLISLRYIYGIGPAKAREICQSLEIGEDKRVNQLSEDEIMKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY+VEGDLRR VAMNIKRL+DLGCYRGLRHR+GLPVRGQRTHTNARTRK + Sbjct: 61 DRDYRVEGDLRREVAMNIKRLVDLGCYRGLRHRKGLPVRGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|317054792|ref|YP_004103259.1| 30S ribosomal protein S13 [Ruminococcus albus 7] gi|315447061|gb|ADU20625.1| 30S ribosomal protein S13 [Ruminococcus albus 7] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+ AL Y++GIG K++ I + + P+ RV + E +V ++R+ I Sbjct: 1 MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|75675578|ref|YP_317999.1| 30S ribosomal protein S13 [Nitrobacter winogradskyi Nb-255] gi|85715108|ref|ZP_01046092.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A] gi|91207710|sp|Q3SSU4|RS13_NITWN RecName: Full=30S ribosomal protein S13 gi|74420448|gb|ABA04647.1| SSU ribosomal protein S13P [Nitrobacter winogradskyi Nb-255] gi|85698023|gb|EAQ35896.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K++ +I K+ IP +RRV QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIEKVKIPADRRVSQLTDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|316933549|ref|YP_004108531.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1] gi|315601263|gb|ADU43798.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|328953133|ref|YP_004370467.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109] gi|328453457|gb|AEB09286.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109] Length = 124 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI+GIG ++Q I + + L ++E+ +IR I Sbjct: 1 MARISGVDLPRNKRMEIALTYIYGIGRTTAQKILQVAEVDGSTKSDNLTDAELTRIRNVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++VEGDLRR ++MNIKRLMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + V + Sbjct: 61 DAHHKVEGDLRREISMNIKRLMDIGCYRGLRHRKSLPVRGQRTHTNARTRKGPRRSVVGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|295396441|ref|ZP_06806603.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030] gi|294970743|gb|EFG46656.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G + + + P+ RV L + E++Q+R I Sbjct: 1 MARLAGVDLPREKRVEVALTYIYGVGRTRASQTLTETGVNPDTRVKDLTDDELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGTFKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|223983944|ref|ZP_03634104.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM 12042] gi|223964136|gb|EEF68488.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM 12042] Length = 121 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR K VV +L YI+GIG +++ I K I + RV L + +V IRQ + Sbjct: 1 MARIAGIDIPRDKHVVVSLTYIYGIGSSTAKTILKKCGISEDIRVKDLTDEQVNAIRQEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q +VEGDLRR +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 DQ-IKVEGDLRRETQLNIKRLMEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163816002|ref|ZP_02207372.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759] gi|158448812|gb|EDP25807.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759] Length = 140 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SSQ I + + P+ R L + EV ++ + I Sbjct: 19 MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 78 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR + NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK K + Sbjct: 79 KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 138 Query: 121 KR 122 K+ Sbjct: 139 KK 140 >gi|237747387|ref|ZP_04577867.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS] gi|229378738|gb|EEO28829.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS] Length = 121 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + +V L I+GIG ++DIC + P ++V L +SE+ ++R+ I Sbjct: 1 MARIAGVNIPNHQHIVIGLTAIYGIGRPRAEDICAATGVAPTKKVKDLDDSELEKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 DK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|326792581|ref|YP_004310402.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427] gi|326543345|gb|ADZ85204.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427] Length = 123 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI GIG +S+ I + I + R+ L E +V +IR+ I Sbjct: 1 MARIAGVDLPKNKRVEIGLTYIFGIGRPTSRQILTEAGIDFDTRIKDLTEEQVSKIRELI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ VEGDLRR +A+NIKRLM++GCYRG+RHRRGLPVRGQ+T TNARTRK K Sbjct: 61 EKLGIIVEGDLRREIALNIKRLMEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|218284161|ref|ZP_03489955.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989] gi|218215354|gb|EEC88892.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989] Length = 121 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L YI+GIG +S+ + + I + RV L E ++ IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYIYGIGLTTSKKVLEETGISEDVRVKDLTEEQLNAIRKTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 DA-IKVEGDLRREVQLNIKRLMEIGCYRGMRHRKGLPVRGQRTKTNARTRKGKAKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|149184336|ref|ZP_01862654.1| ribosomal protein S13 [Erythrobacter sp. SD-21] gi|148831656|gb|EDL50089.1| ribosomal protein S13 [Erythrobacter sp. SD-21] Length = 122 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 74/122 (60%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG + +I +KL I RV L + E++++R+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTKAVEIADKLGIDHATRVQDLTDEELLRVRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLRR AMNIKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K + Sbjct: 61 DEEHTVEGDLRRETAMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86749437|ref|YP_485933.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris HaA2] gi|123408223|sp|Q2IXN8|RS13_RHOP2 RecName: Full=30S ribosomal protein S13 gi|86572465|gb|ABD07022.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris HaA2] Length = 122 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ +I K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEIIEKVKIPVDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329945755|ref|ZP_08293442.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str. F0386] gi|328528203|gb|EGF55181.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str. F0386] Length = 136 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 82/121 (67%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI+GV++PR KRV AL YI GIG + + + P+ RV L E E++++R I+ Sbjct: 14 ARISGVDLPREKRVEVALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVRLRTHID 73 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 YQVEGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK + +K Sbjct: 74 GSYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGKK 133 Query: 122 R 122 + Sbjct: 134 K 134 >gi|307718228|ref|YP_003873760.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192] gi|306531953|gb|ADN01487.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192] Length = 121 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG S++ IC K IP E +V +L +V ++RQ I Sbjct: 1 MARIAGVDLP-NKQIQIALTYIYGIGRASARKICEKTGIPYETKVSELTSDQVQKLRQVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK K + Sbjct: 60 ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|302390982|ref|YP_003826802.1| 30S ribosomal protein S13P [Acetohalobium arabaticum DSM 5501] gi|302203059|gb|ADL11737.1| SSU ribosomal protein S13P [Acetohalobium arabaticum DSM 5501] Length = 123 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++QDI + + P+ RV L E EV ++R+ I Sbjct: 1 MARIEGVDLPRDKRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTRVRDLTEEEVAKLRRVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEG+LRR + +IKRL D+GCYRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 DEEYTVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQRTRTNARTRKGPKQTVGTK 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|291460742|ref|ZP_06600132.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str. F0262] gi|291416701|gb|EFE90420.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str. F0262] Length = 122 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG S+ I + + P+ RV L + EV I I Sbjct: 1 MARIAGVDLPREKRIEIGLTYIYGIGRSSADKILRESKVNPDTRVKDLTDDEVKAIANYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 AENQMVEGDLRRETALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|18311361|ref|NP_563295.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13] gi|110801380|ref|YP_697068.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124] gi|110802938|ref|YP_699637.1| 30S ribosomal protein S13 [Clostridium perfringens SM101] gi|168205208|ref|ZP_02631213.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987] gi|168211879|ref|ZP_02637504.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626] gi|168215202|ref|ZP_02640827.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969] gi|168216657|ref|ZP_02642282.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239] gi|169347160|ref|ZP_02866102.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495] gi|182626922|ref|ZP_02954655.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721] gi|32363368|sp|Q8XHU8|RS13_CLOPE RecName: Full=30S ribosomal protein S13 gi|123047165|sp|Q0SQH0|RS13_CLOPS RecName: Full=30S ribosomal protein S13 gi|123049590|sp|Q0TMS2|RS13_CLOP1 RecName: Full=30S ribosomal protein S13 gi|18146045|dbj|BAB82085.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13] gi|110676027|gb|ABG85014.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124] gi|110683439|gb|ABG86809.1| 30S ribosomal protein S13 [Clostridium perfringens SM101] gi|169296843|gb|EDS78972.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495] gi|170663261|gb|EDT15944.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987] gi|170710177|gb|EDT22359.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626] gi|170713398|gb|EDT25580.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969] gi|177907712|gb|EDT70327.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721] gi|182381222|gb|EDT78701.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239] Length = 121 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG +SQ I + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGLPTSQKILEVTGVNPDTRVKDLTEEEVNSIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +D VEGDLRR VA+NIKRL+++G YRG+RHR+GLP+RGQ+T TNARTRK K + Sbjct: 61 -KDLTVEGDLRREVALNIKRLVEIGSYRGIRHRKGLPLRGQKTKTNARTRKGPKKTIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|323700829|ref|ZP_08112741.1| 30S ribosomal protein S13 [Desulfovibrio sp. ND132] gi|323460761|gb|EGB16626.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans ND132] Length = 123 Score = 177 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + I I L +V QIR I Sbjct: 1 MARIAGVDLPRNKRIDIALTYIYGIGRTMAMQILETTGIDWTMSSDDLTADDVNQIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR + NIKRLMD+GCYRGLRHRRGLPVRGQ++ TNARTRK + + R Sbjct: 61 ENNYKVEGDLRREITTNIKRLMDIGCYRGLRHRRGLPVRGQKSKTNARTRKGPRRSVMGR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|260907116|ref|ZP_05915438.1| 30S ribosomal protein S13 [Brevibacterium linens BL2] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + I P+ RV L ++E++Q+R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGRTRASQTLTETGISPDTRVKDLSDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +QVEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGTFQVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297618358|ref|YP_003703517.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680] gi|297146195|gb|ADI02952.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680] Length = 123 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 94/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRVV AL YI GIG S++ I + I P+ RV L E E+ +IR+AI Sbjct: 1 MARVAGVDLPRDKRVVVALTYIFGIGRSSAEKIVKETGINPDTRVKDLTEEEIAKIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEG+LRR ++MNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DRGYKVEGELRREISMNIKRLIDIGCYRGIRHRRGLPVRGQRTRTNARTRKGPRRTVGTK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|85858170|ref|YP_460372.1| 30S ribosomal protein S13 [Syntrophus aciditrophicus SB] gi|123515694|sp|Q2LQD2|RS13_SYNAS RecName: Full=30S ribosomal protein S13 gi|85721261|gb|ABC76204.1| SSU ribosomal protein S13P [Syntrophus aciditrophicus SB] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 92/122 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +++I K I + + +L +SE+ IR I Sbjct: 1 MARIAGVDLPKNKRMEIALTYIYGIGRTKAKEILEKAEISFDTKTDELADSEINAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++D++VEGDLRR ++M+IKRLMD+G YRGLRHR+GLPVRGQRTHTNARTRK + + Sbjct: 61 DRDHKVEGDLRRDISMSIKRLMDVGAYRGLRHRKGLPVRGQRTHTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|115525563|ref|YP_782474.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisA53] gi|122295429|sp|Q07KP0|RS13_RHOP5 RecName: Full=30S ribosomal protein S13 gi|115519510|gb|ABJ07494.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisA53] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + DI K+ IP +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|92117120|ref|YP_576849.1| 30S ribosomal protein S13 [Nitrobacter hamburgensis X14] gi|122418085|sp|Q1QN08|RS13_NITHX RecName: Full=30S ribosomal protein S13 gi|91800014|gb|ABE62389.1| SSU ribosomal protein S13P [Nitrobacter hamburgensis X14] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K++ +I +K+ IP +RRV QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIDKVKIPADRRVSQLSDQEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|315186309|gb|EFU20070.1| SSU ribosomal protein S13P [Spirochaeta thermophila DSM 6578] Length = 121 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG S++ IC + IP E +V +L +V ++RQ I Sbjct: 1 MARIAGVDLP-NKQIQIALTYIYGIGRSSARKICERTGIPYETKVSELTSDQVQKLRQVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEG LR VA+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 60 ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|167767779|ref|ZP_02439832.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1] gi|317497070|ref|ZP_07955397.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA] gi|167710518|gb|EDS21097.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1] gi|291558880|emb|CBL37680.1| 30S ribosomal protein S13 [butyrate-producing bacterium SSC/2] gi|316895615|gb|EFV17770.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S++ I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLSSAKRILAEANVDPDTRVRDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +A+NIKRL ++GCYRG RHR+GLP RGQ+T TNARTRK K + Sbjct: 61 NDTQVVEGDLRREIALNIKRLKEIGCYRGKRHRQGLPCRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|119538759|gb|ABL83376.1| SSU ribosomal protein S13P [Nocardioides sp. JS614] Length = 140 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +Q + + P+ RVHQL + E++++R I Sbjct: 17 MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++++EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 77 EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAGK 136 Query: 121 KR 122 K+ Sbjct: 137 KK 138 >gi|317505826|ref|ZP_07963671.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974] gi|316255908|gb|EFV15133.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974] Length = 124 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I + P+ R L + +V +R+ I Sbjct: 1 MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDGDVAVLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|27380489|ref|NP_772018.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110] gi|32363304|sp|Q89JA6|RS13_BRAJA RecName: Full=30S ribosomal protein S13 gi|27353653|dbj|BAC50643.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110] Length = 122 Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ IP +RRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302388062|ref|YP_003823884.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1] gi|302198690|gb|ADL06261.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1] Length = 122 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS I + + P+ RV L + EV +I I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK K + Sbjct: 61 GDSQIVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148381395|ref|YP_001255936.1| ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502] gi|153932993|ref|YP_001385770.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397] gi|153937296|ref|YP_001389177.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall] gi|153939368|ref|YP_001392808.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland] gi|168178858|ref|ZP_02613522.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916] gi|168181890|ref|ZP_02616554.1| 30S ribosomal protein S13 [Clostridium botulinum Bf] gi|170757214|ref|YP_001783095.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra] gi|187776601|ref|ZP_02993074.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC 15579] gi|226950907|ref|YP_002805998.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto] gi|237796916|ref|YP_002864468.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657] gi|166231909|sp|A7FZ47|RS13_CLOB1 RecName: Full=30S ribosomal protein S13 gi|166231910|sp|A5I7I0|RS13_CLOBH RecName: Full=30S ribosomal protein S13 gi|166231911|sp|A7GJ48|RS13_CLOBL RecName: Full=30S ribosomal protein S13 gi|226712719|sp|B1IGC8|RS13_CLOBK RecName: Full=30S ribosomal protein S13 gi|254811140|sp|C1FMS5|RS13_CLOBJ RecName: Full=30S ribosomal protein S13 gi|259494669|sp|C3KVM5|RS13_CLOB6 RecName: Full=30S ribosomal protein S13 gi|148290879|emb|CAL85015.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502] gi|152929037|gb|ABS34537.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397] gi|152933210|gb|ABS38709.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall] gi|152935264|gb|ABS40762.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland] gi|169122426|gb|ACA46262.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra] gi|182670171|gb|EDT82147.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916] gi|182674848|gb|EDT86809.1| 30S ribosomal protein S13 [Clostridium botulinum Bf] gi|187775260|gb|EDU39062.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC 15579] gi|226843905|gb|ACO86571.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto] gi|229261193|gb|ACQ52226.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657] gi|295320788|gb|ADG01166.1| 30S ribosomal protein S13 [Clostridium botulinum F str. 230613] gi|322807780|emb|CBZ05355.1| SSU ribosomal protein S13p (S18e) [Clostridium botulinum H04402 065] Length = 123 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KRV L YI+GIG +SQ+I + P+ RV L E EV IR + Sbjct: 1 MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILKATGVNPDTRVKDLSEEEVNAIRDYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK + + Sbjct: 61 NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGPKRAIGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|219682880|ref|YP_002469263.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis AD011] gi|219620530|gb|ACL28687.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis AD011] gi|289178181|gb|ADC85427.1| SSU ribosomal protein S13P [Bifidobacterium animalis subsp. lactis BB-12] Length = 136 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 12 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R + + Y+G+RHR+GLPVRGQRT TNARTRK + + Sbjct: 72 ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|183601968|ref|ZP_02963337.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis HN019] gi|241190457|ref|YP_002967851.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195863|ref|YP_002969418.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218853|gb|EDT89495.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis HN019] gi|240248849|gb|ACS45789.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250417|gb|ACS47356.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793444|gb|ADG32979.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis V9] Length = 125 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R + + Y+G+RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|187930341|ref|YP_001900828.1| 30S ribosomal protein S13 [Ralstonia pickettii 12J] gi|241664509|ref|YP_002982869.1| 30S ribosomal protein S13 [Ralstonia pickettii 12D] gi|309782857|ref|ZP_07677577.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA] gi|226712780|sp|B2UEJ6|RS13_RALPJ RecName: Full=30S ribosomal protein S13 gi|187727231|gb|ACD28396.1| ribosomal protein S13 [Ralstonia pickettii 12J] gi|240866536|gb|ACS64197.1| ribosomal protein S13 [Ralstonia pickettii 12D] gi|308918281|gb|EFP63958.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA] Length = 121 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC IP +++V L + + +R+ I Sbjct: 1 MARIAGVNIPNHKHTVIGLTAIYGIGRSRAQKICEATGIPTDKKVKDLTDPDQDALRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|295111401|emb|CBL28151.1| SSU ribosomal protein S13P [Synergistetes bacterium SGP1] Length = 125 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 87/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ AL YI GIG S++ I + P+ RV L E + ++R+ I Sbjct: 1 MARISGVDLPREKRIEIALTYIFGIGVPSARKILAATGVNPDVRVKDLSEDDAQKLRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y VEGDLRR V+M+IKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK + + Sbjct: 61 EEHYVVEGDLRREVSMSIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRKGKRRTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|291542056|emb|CBL15166.1| SSU ribosomal protein S13P [Ruminococcus bromii L2-63] Length = 122 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG K++ DI + P+ RV L E ++ ++R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRKTADDIIAATGVNPDTRVRDLTEEDIAKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR +A +IKRL+D+GCYRG+RHR+GLPVRGQR+ TNARTRK K + Sbjct: 61 EHHCRVEGDLRRDIAYDIKRLIDIGCYRGVRHRKGLPVRGQRSKTNARTRKGPRKTMANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|169630852|ref|YP_001704501.1| 30S ribosomal protein S13 [Mycobacterium abscessus ATCC 19977] gi|226712765|sp|B1MGA2|RS13_MYCA9 RecName: Full=30S ribosomal protein S13 gi|169242819|emb|CAM63847.1| 30S ribosomal protein S13 [Mycobacterium abscessus] Length = 124 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S++I I PE+R L + +V Q+R+ I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSKEILAATGISPEQRSKDLTDDQVTQLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EATLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225175649|ref|ZP_03729643.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1] gi|225168978|gb|EEG77778.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1] Length = 123 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 76/123 (61%), Positives = 96/123 (78%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+GIG K+SQDI ++ A+ + RV L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIALTYIYGIGRKTSQDILSQSAVNMDTRVRDLTEDEVNRLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y+VEGDLRR VAMNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + GV Sbjct: 61 DKNYKVEGDLRREVAMNIKRLMEIGSYRGIRHRRGLPVRGQTTKNNARTRKGPKRTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|269123122|ref|YP_003305699.1| 30S ribosomal protein S13 [Streptobacillus moniliformis DSM 12112] gi|268314448|gb|ACZ00822.1| ribosomal protein S13 [Streptobacillus moniliformis DSM 12112] Length = 121 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG S +I K I + +V L E EV +IR + Sbjct: 1 MARIAGVDIPRNKRVEVSLTYIYGIGRSISNEILVKAGINRDTKVKDLTEEEVGKIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL D+ CYRGLRHR GLPVRGQ+T TNARTRK K VA+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLTDIKCYRGLRHRMGLPVRGQKTKTNARTRKGPAKMAVAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|212637979|ref|YP_002314499.1| 30S ribosomal protein S13 [Anoxybacillus flavithermus WK1] gi|226712689|sp|B7GJ92|RS13_ANOFW RecName: Full=30S ribosomal protein S13 gi|212559459|gb|ACJ32514.1| Ribosomal protein S13 [Anoxybacillus flavithermus WK1] Length = 121 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKATAQKILAEAGVSEDTRVRDLTEEELGKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|289706557|ref|ZP_06502907.1| 30S ribosomal protein S13 [Micrococcus luteus SK58] gi|289556692|gb|EFD50033.1| 30S ribosomal protein S13 [Micrococcus luteus SK58] Length = 122 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ + I P RV L + +++Q+R I Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLSATGIDPNIRVKDLSDEQLVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|150392134|ref|YP_001322183.1| 30S ribosomal protein S13 [Alkaliphilus metalliredigens QYMF] gi|166991596|sp|A6TWF6|RS13_ALKMQ RecName: Full=30S ribosomal protein S13 gi|149951996|gb|ABR50524.1| ribosomal protein S13 [Alkaliphilus metalliredigens QYMF] Length = 123 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG ++S I I + R+ L E EV ++R+ I Sbjct: 1 MARIAGVDLPREKRVEVGLTYIFGIGRQTSNKILAATGINVDTRIKDLTEEEVNELRKLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DYQVEGDLRR V++NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK + + Sbjct: 61 DADYQVEGDLRREVSLNIKRLKEIRCYRGIRHTKGLPVRGQKTKTNARTRKGPKRTVGRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227876169|ref|ZP_03994285.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243] gi|269976924|ref|ZP_06183898.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1] gi|306819444|ref|ZP_07453151.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239] gi|307701694|ref|ZP_07638710.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16] gi|227843130|gb|EEJ53323.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243] gi|269934755|gb|EEZ91315.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1] gi|304647736|gb|EFM45054.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239] gi|307613197|gb|EFN92450.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16] Length = 124 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +++ + P+ RV L E E+I++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIYGIGRTRAKETLESTGVSPDTRVKDLTEDELIKLRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNARTRK + + Sbjct: 61 QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294789216|ref|ZP_06754455.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453] gi|294482957|gb|EFG30645.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453] Length = 120 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKSICEAAGIAPTTKVKDLNESQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|290958126|ref|YP_003489308.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22] gi|260647652|emb|CBG70757.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22] Length = 126 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ+ + P+ RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEVALTYVFGIGRTLSQETLAATGVNPDTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|169335654|ref|ZP_02862847.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM 17244] gi|169258392|gb|EDS72358.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM 17244] Length = 122 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S + + I P+ R+ L E EV ++R I Sbjct: 1 MARIAGVDLPKDKRVEIGLTYIYGIGQATSNKLLAEAGINPDTRIKDLSEEEVNKLRSLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ++ TNARTRK K + Sbjct: 61 DEKVTVEGDLRREVSLNIKRLMEIGTYRGLRHRRGLPVRGQKSKTNARTRKGPKKTVSRK 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|103486060|ref|YP_615621.1| 30S ribosomal protein S13 [Sphingopyxis alaskensis RB2256] gi|123380095|sp|Q1GVN4|RS13_SPHAL RecName: Full=30S ribosomal protein S13 gi|98976137|gb|ABF52288.1| SSU ribosomal protein S13P [Sphingopyxis alaskensis RB2256] Length = 122 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 81/122 (66%), Positives = 95/122 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P KRV+ AL YIHGIG K++ DI +KL I RRV L ++EV+QIR+ I Sbjct: 1 MARIAGVNLPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHGRRVQDLSDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + D+ VEGDLRR AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DADHTVEGDLRRNTAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|23466154|ref|NP_696757.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705] gi|46190440|ref|ZP_00121530.2| COG0099: Ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|189440593|ref|YP_001955674.1| 30S ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|227546500|ref|ZP_03976549.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621034|ref|ZP_04664065.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133898|ref|YP_004001237.1| rpsm [Bifidobacterium longum subsp. longum BBMN68] gi|317483426|ref|ZP_07942416.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA] gi|322689905|ref|YP_004209639.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 157F] gi|322691846|ref|YP_004221416.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM 1217] gi|32363330|sp|Q8G3Z5|RS13_BIFLO RecName: Full=30S ribosomal protein S13 gi|226712697|sp|B3DQD8|RS13_BIFLD RecName: Full=30S ribosomal protein S13 gi|23326891|gb|AAN25393.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705] gi|189429028|gb|ACD99176.1| Ribosomal protein S13 [Bifidobacterium longum DJO10A] gi|227213049|gb|EEI80928.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239516135|gb|EEQ56002.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516447|emb|CBK70063.1| SSU ribosomal protein S13P [Bifidobacterium longum subsp. longum F8] gi|311773192|gb|ADQ02680.1| RpsM [Bifidobacterium longum subsp. longum BBMN68] gi|316915112|gb|EFV36544.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA] gi|320456702|dbj|BAJ67324.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM 1217] gi|320461241|dbj|BAJ71861.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis 157F] Length = 125 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319654894|ref|ZP_08008969.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2] gi|317393457|gb|EFV74220.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2] Length = 121 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDVPREKRVVISLTYIFGIGKSTAQKVLAEAGVSEDTRVRDLTEDELNKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|237749537|ref|ZP_04580017.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13] gi|229380899|gb|EEO30990.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13] Length = 121 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + +V L I GIG +++IC + P ++V L ++++ ++R I Sbjct: 1 MARIAGVNIPNHQHIVIGLTAIFGIGRPRAEEICAATGVDPTKKVKDLDDNDLEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 GK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|152988309|ref|YP_001346245.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7] gi|166231915|sp|A6UZL0|RS13_PSEA7 RecName: Full=30S ribosomal protein S13 gi|150963467|gb|ABR85492.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7] Length = 118 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q+IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-HTTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|81562141|sp|Q6N4V5|RS13_RHOPA RecName: Full=30S ribosomal protein S13; AltName: Full=RRP-S13 gi|39650146|emb|CAE28669.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009] Length = 128 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 98/121 (80%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I+ Sbjct: 8 ARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVID 67 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 68 RDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKK 127 Query: 122 R 122 + Sbjct: 128 K 128 >gi|291457227|ref|ZP_06596617.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213] gi|291381062|gb|EFE88580.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213] Length = 125 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|326383229|ref|ZP_08204917.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395] gi|326197979|gb|EGD55165.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395] Length = 122 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G +S++I + + R L +++V ++R+ I Sbjct: 1 MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILAATGLSADLRAKDLTDADVSKLREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK K + Sbjct: 61 EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|313904926|ref|ZP_07838297.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6] gi|313470183|gb|EFR65514.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6] Length = 123 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 66/123 (53%), Positives = 84/123 (68%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S + + + P+ RV L + EV + AI Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGRTTSTKLLAQAGVNPDTRVRDLTDDEVKSLTNAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ VEGDLRR +AMNIKRL ++GCYRG RHR GLPVRGQ+T TNARTRK + Sbjct: 61 EELQVTVEGDLRREIAMNIKRLQEIGCYRGKRHRVGLPVRGQKTKTNARTRKGPRRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|269217221|ref|ZP_06161075.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122] gi|269129358|gb|EEZ60443.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122] Length = 122 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ L YI+GIG S++ I + P+ RV + E ++ +IR+ I Sbjct: 1 MPRLFGVDLPREKRIETGLTYIYGIGDTSAKKIIAATGVNPDIRVKDISEDDLQKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+ +EGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK + + Sbjct: 61 DQNMTIEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|120402444|ref|YP_952273.1| 30S ribosomal protein S13 [Mycobacterium vanbaalenii PYR-1] gi|158706254|sp|A1T517|RS13_MYCVP RecName: Full=30S ribosomal protein S13 gi|119955262|gb|ABM12267.1| SSU ribosomal protein S13P [Mycobacterium vanbaalenii PYR-1] Length = 124 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG SQ+I I + R L + +V Q+R I Sbjct: 1 MARLMGVDLPRDKRMEIALTYIYGIGRTRSQEILEATGISRDMRTKDLTDDQVTQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|256830516|ref|YP_003159244.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028] gi|256579692|gb|ACU90828.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028] Length = 123 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG ++ I + I + L ++ +R+ + Sbjct: 1 MARLVGVDLPRNKRLDIALTYIYGIGRATALKILDATGIDWTKNSDDLTSDDINTLRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++VEGDLRR + NIKRLMD+GCYRGLRHRRGLP RGQRTHTNARTRK + V + Sbjct: 61 EASHKVEGDLRREIVANIKRLMDIGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAIVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269122556|ref|YP_003310733.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386] gi|268616434|gb|ACZ10802.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386] Length = 121 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG ++ I K + +V L E +V QIR + Sbjct: 1 MARIAGVDIPRNKRVEISLTYIFGIGRSTANKILEKANVDKNIKVKDLSEEQVGQIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +++EG+LR+ + +NIKRLMD+ YRGLRHR GLPVRGQ+T TNARTRK K VA+ Sbjct: 61 DE-FKIEGELRKEIRLNIKRLMDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKAAVAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|297201754|ref|ZP_06919151.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083] gi|197710871|gb|EDY54905.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083] Length = 126 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + I P RV L E E++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEVALTYVFGIGRTLSQLTLAETGINPNTRVRDLSEEELVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNLKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312144223|ref|YP_003995669.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus'] gi|311904874|gb|ADQ15315.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus'] Length = 128 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG +SQ+I +I P+ RV L E+E+ +R+ I Sbjct: 1 MARIEGVDLPRNKRVEIGLTYIYGIGKTTSQNILENTSIDPDTRVKDLTEAEISSLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEG+LRR +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 DNNYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGIK 120 Query: 121 KR 122 R Sbjct: 121 TR 122 >gi|220930990|ref|YP_002507898.1| ribosomal protein S13 [Halothermothrix orenii H 168] gi|254811150|sp|B8D0T4|RS13_HALOH RecName: Full=30S ribosomal protein S13 gi|219992300|gb|ACL68903.1| ribosomal protein S13 [Halothermothrix orenii H 168] Length = 122 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 2/123 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I I P+ RV L E+E+ ++R+ + Sbjct: 1 MARIAGVDLPRNKRVEIGLTYIYGIGRSTSNKILKVTGIDPDTRVKDLTEAEIAKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 ++ YQVEGDLRR + NIKRLMD+GCYRG+RHR+ LPVRGQRT TNARTRK K GV Sbjct: 61 DK-YQVEGDLRREIRANIKRLMDIGCYRGIRHRKNLPVRGQRTRTNARTRKGPKKTVGVR 119 Query: 120 RKR 122 R + Sbjct: 120 RAK 122 >gi|260589252|ref|ZP_05855165.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583] gi|331082660|ref|ZP_08331783.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540333|gb|EEX20902.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583] gi|330400279|gb|EGG79921.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA] Length = 123 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +S I K + P+ RV + + EV +IR AI Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILEKAGVNPDTRVRDVTDEEVGKIRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK + Sbjct: 61 EELQIPVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|188581394|ref|YP_001924839.1| 30S ribosomal protein S13 [Methylobacterium populi BJ001] gi|226712761|sp|B1Z771|RS13_METPB RecName: Full=30S ribosomal protein S13 gi|179344892|gb|ACB80304.1| ribosomal protein S13 [Methylobacterium populi BJ001] Length = 122 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 86/122 (70%), Positives = 101/122 (82%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|108798082|ref|YP_638279.1| 30S ribosomal protein S13 [Mycobacterium sp. MCS] gi|119867178|ref|YP_937130.1| 30S ribosomal protein S13 [Mycobacterium sp. KMS] gi|126433742|ref|YP_001069433.1| 30S ribosomal protein S13 [Mycobacterium sp. JLS] gi|123179360|sp|Q1BD11|RS13_MYCSS RecName: Full=30S ribosomal protein S13 gi|158706250|sp|A3PVL5|RS13_MYCSJ RecName: Full=30S ribosomal protein S13 gi|158706251|sp|A1UBY2|RS13_MYCSK RecName: Full=30S ribosomal protein S13 gi|108768501|gb|ABG07223.1| SSU ribosomal protein S13P [Mycobacterium sp. MCS] gi|119693267|gb|ABL90340.1| SSU ribosomal protein S13P [Mycobacterium sp. KMS] gi|126233542|gb|ABN96942.1| SSU ribosomal protein S13P [Mycobacterium sp. JLS] Length = 124 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G SQ+I I + R L + +V Q+R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGIDRDLRTKDLTDDQVTQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|54022801|ref|YP_117043.1| 30S ribosomal protein S13 [Nocardia farcinica IFM 10152] gi|81375955|sp|Q5Z1L2|RS13_NOCFA RecName: Full=30S ribosomal protein S13 gi|54014309|dbj|BAD55679.1| putative ribosomal protein S13 [Nocardia farcinica IFM 10152] Length = 123 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S++I + P+ R L + ++ ++R I Sbjct: 1 MARLMGVDLPREKRMEIALTYIYGIGRTRSKEILEATGVSPDLRSKDLSDDDLTKLRDYI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E +++VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 EASEFKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|262197165|ref|YP_003268374.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365] gi|262080512|gb|ACY16481.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365] Length = 127 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 75/121 (61%), Positives = 92/121 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + S ++ +K I P++R L E++V IR I Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGRRRSNELLDKAGITPDKRTDDLDENDVRMIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK + V + Sbjct: 61 EANYKVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPRRMPVKK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|161485633|ref|YP_925063.2| 30S ribosomal protein S13 [Nocardioides sp. JS614] gi|158706369|sp|A1SNJ1|RS13_NOCSJ RecName: Full=30S ribosomal protein S13 Length = 124 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +Q + + P+ RVHQL + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++++EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|162139877|ref|YP_744397.2| 30S ribosomal protein S13 [Granulibacter bethesdensis CGDNIH1] gi|158706371|sp|Q0BUM8|RS13_GRABC RecName: Full=30S ribosomal protein S13 Length = 125 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV +L YI+GIG +Q IC +L+IP ERRV+QL + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK + Sbjct: 61 DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|29831494|ref|NP_826128.1| 30S ribosomal protein S13 [Streptomyces avermitilis MA-4680] gi|32363228|sp|P59756|RS13_STRAW RecName: Full=30S ribosomal protein S13 gi|29608610|dbj|BAC72663.1| putative ribosomal protein S13 [Streptomyces avermitilis MA-4680] Length = 126 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + + P RV L E E+++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQKTLAETGVNPNTRVRDLSEEELVRIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++ EGDLRR V +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNFKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|283782777|ref|YP_003373531.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05] gi|297242946|ref|ZP_06926884.1| ribosomal protein S13 [Gardnerella vaginalis AMD] gi|308235471|ref|ZP_07666208.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14018] gi|311115144|ref|YP_003986365.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019] gi|283441639|gb|ADB14105.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05] gi|296889157|gb|EFH27891.1| ribosomal protein S13 [Gardnerella vaginalis AMD] gi|310946638|gb|ADP39342.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019] Length = 125 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ + P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGVNPDTRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154148745|ref|YP_001405815.1| 30S ribosomal protein S13 [Campylobacter hominis ATCC BAA-381] gi|166231907|sp|A7HZX4|RS13_CAMHC RecName: Full=30S ribosomal protein S13 gi|153804754|gb|ABS51761.1| ribosomal protein S13p/S18e [Campylobacter hominis ATCC BAA-381] Length = 127 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 68/119 (57%), Positives = 86/119 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L YI+GIG +S+ I + I ++RV L E EV IR+ I Sbjct: 1 MARISGVDLPKKKRIEYGLTYIYGIGLFTSRKILDATGISYDKRVADLSEDEVAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ Y VEGDLR+ V+MNIK LMDLGCYRGLRH +GLPVRGQ+T TNARTRK K A Sbjct: 61 QEHYMVEGDLRKEVSMNIKSLMDLGCYRGLRHIKGLPVRGQKTKTNARTRKGKRKTVGA 119 >gi|163851602|ref|YP_001639645.1| ribosomal protein S13 [Methylobacterium extorquens PA1] gi|218530411|ref|YP_002421227.1| 30S ribosomal protein S13 [Methylobacterium chloromethanicum CM4] gi|240138770|ref|YP_002963242.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1] gi|254561370|ref|YP_003068465.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4] gi|226712759|sp|A9W4R8|RS13_METEP RecName: Full=30S ribosomal protein S13 gi|254811154|sp|B7L0S8|RS13_METC4 RecName: Full=30S ribosomal protein S13 gi|163663207|gb|ABY30574.1| ribosomal protein S13 [Methylobacterium extorquens PA1] gi|218522714|gb|ACK83299.1| ribosomal protein S13 [Methylobacterium chloromethanicum CM4] gi|240008739|gb|ACS39965.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1] gi|254268648|emb|CAX24607.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4] Length = 122 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 87/122 (71%), Positives = 102/122 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP AKRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+AI Sbjct: 1 MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYIVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302877824|ref|YP_003846388.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2] gi|302580613|gb|ADL54624.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2] Length = 121 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V AL I+GIG SQ IC + P ++ L ++EV ++R+ + Sbjct: 1 MARIAGVNIPNHQHAVIALTAIYGIGRVRSQGICAAAGVTPSVKMKDLTDAEVEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHRRGLP RGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPCRGQRTRTNARTRKGPRKAISGS 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|91977630|ref|YP_570289.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB5] gi|123762626|sp|Q134V1|RS13_RHOPS RecName: Full=30S ribosomal protein S13 gi|91684086|gb|ABE40388.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB5] Length = 122 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 85/122 (69%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKNAADIIEKVKIPVDRRVNQLSDAEVLQIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|91774658|ref|YP_544414.1| 30S ribosomal protein S13 [Methylobacillus flagellatus KT] gi|123380633|sp|Q1H4L4|RS13_METFK RecName: Full=30S ribosomal protein S13 gi|91708645|gb|ABE48573.1| SSU ribosomal protein S13P [Methylobacillus flagellatus KT] Length = 120 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G +++ IC + ++ L ++EV ++R + Sbjct: 1 MARIAGVNIPNHKHTEIALTSIYGVGRTTAKQICLAAGVSATAKIKDLNDAEVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + QVEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK K A Sbjct: 61 AK-LQVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPIKPIKAS 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|17547715|ref|NP_521117.1| 30S ribosomal protein S13 [Ralstonia solanacearum GMI1000] gi|32363369|sp|Q8XV35|RS13_RALSO RecName: Full=30S ribosomal protein S13 gi|17430020|emb|CAD16705.1| probable 30s ribosomal protein s13 [Ralstonia solanacearum GMI1000] gi|299065438|emb|CBJ36607.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CMR15] Length = 121 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG ++ IC IP +++V L + + +R+ I Sbjct: 1 MARIAGVNIPNHKHTVIGLTAIYGIGRSRARKICEATGIPTDKKVKDLTDPDQDALRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|294630918|ref|ZP_06709478.1| 30S ribosomal protein S13 [Streptomyces sp. e14] gi|292834251|gb|EFF92600.1| 30S ribosomal protein S13 [Streptomyces sp. e14] Length = 126 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLAATGVDPNTRVRDLTEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296268578|ref|YP_003651210.1| 30S ribosomal protein S13 [Thermobispora bispora DSM 43833] gi|296091365|gb|ADG87317.1| ribosomal protein S13 [Thermobispora bispora DSM 43833] Length = 126 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG +++I I P+ RV+QL ++E++ IR I Sbjct: 1 MARLVGVDLPRDKRLEIALTYIYGIGRSRAKEILKATGINPDLRVYQLTDAELVPIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +I+R +++GCY+G+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRKGLPVRGQRTQTNARTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257866552|ref|ZP_05646205.1| ribosomal protein S13 [Enterococcus casseliflavus EC30] gi|257872932|ref|ZP_05652585.1| ribosomal protein S13 [Enterococcus casseliflavus EC10] gi|257876156|ref|ZP_05655809.1| ribosomal protein S13 [Enterococcus casseliflavus EC20] gi|325567353|ref|ZP_08144020.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755] gi|257800510|gb|EEV29538.1| ribosomal protein S13 [Enterococcus casseliflavus EC30] gi|257807096|gb|EEV35918.1| ribosomal protein S13 [Enterococcus casseliflavus EC10] gi|257810322|gb|EEV39142.1| ribosomal protein S13 [Enterococcus casseliflavus EC20] gi|325158786|gb|EGC70932.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755] Length = 121 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILADAGVSEEVRVRDLTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|257064665|ref|YP_003144337.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476] gi|256792318|gb|ACV22988.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476] Length = 123 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 62/121 (51%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ L YI+GIG +++ I + + P+ RV + E ++ +IR I Sbjct: 1 MPRLFGVDLPRDKRIETGLTYIYGIGNTTAKKIIAETGVDPDVRVRDISEEDLQKIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DANLTVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGPRKQIGGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|169350819|ref|ZP_02867757.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552] gi|169292405|gb|EDS74538.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552] Length = 121 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 91/122 (74%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q+I K+ I RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILAKVGINENTRVKDLTEDEIGKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKAKPIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|253682110|ref|ZP_04862907.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873] gi|331268439|ref|YP_004394931.1| 30S ribosomal protein S13 [Clostridium botulinum BKT015925] gi|253561822|gb|EES91274.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873] gi|329124989|gb|AEB74934.1| ribosomal protein S13 [Clostridium botulinum BKT015925] Length = 123 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S+ I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSRQILKETGVNPDTRVKDLSEEEVNTIRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|195952668|ref|YP_002120958.1| 30S ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1] gi|226712748|sp|B4U769|RS13_HYDS0 RecName: Full=30S ribosomal protein S13 gi|195932280|gb|ACG56980.1| ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1] Length = 126 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 93/122 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL YI+GIG+ ++++C + IP +++ +L E+ Q+R+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYIYGIGWSKAREVCEQTGIPSIKKLGELTPEELNQLRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+ +VEGDLRR V +NIKRL+D+G YRGLRH RGLPVRGQ+T TNARTRK KG VA Sbjct: 61 EQNIKVEGDLRREVQLNIKRLVDIGTYRGLRHVRGLPVRGQQTKTNARTRKGRRKGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|118443662|ref|YP_877224.1| 30S ribosomal protein S13 [Clostridium novyi NT] gi|158706223|sp|A0PXX2|RS13_CLONN RecName: Full=30S ribosomal protein S13 gi|118134118|gb|ABK61162.1| ribosomal protein S13p/S18e [Clostridium novyi NT] Length = 123 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S++I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|294786436|ref|ZP_06751690.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305] gi|294485269|gb|EFG32903.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305] Length = 134 Score = 176 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 12 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK + + Sbjct: 72 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|148256370|ref|YP_001240955.1| 30S ribosomal protein S13 [Bradyrhizobium sp. BTAi1] gi|158706214|sp|A5ELK5|RS13_BRASB RecName: Full=30S ribosomal protein S13 gi|146408543|gb|ABQ37049.1| SSU ribosomal protein S13P [Bradyrhizobium sp. BTAi1] Length = 122 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ I +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGPKIASEIIEKVKIAEDRRVNQLSDQEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329770016|ref|ZP_08261411.1| 30S ribosomal protein S13 [Gemella sanguinis M325] gi|328837327|gb|EGF86957.1| 30S ribosomal protein S13 [Gemella sanguinis M325] Length = 121 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L ++ +IR+A+ Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK K + Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|257870541|ref|ZP_05650194.1| ribosomal protein S13 [Enterococcus gallinarum EG2] gi|257804705|gb|EEV33527.1| ribosomal protein S13 [Enterococcus gallinarum EG2] Length = 121 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|86609043|ref|YP_477805.1| 30S ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502213|sp|Q2JL76|RS13_SYNJB RecName: Full=30S ribosomal protein S13 gi|86557585|gb|ABD02542.1| ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 127 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 72/117 (61%), Positives = 83/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG S+ I K I P+ R L ++EV +R + Sbjct: 1 MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTRK K Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRKGVRKTV 117 >gi|296445045|ref|ZP_06887006.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b] gi|296257466|gb|EFH04532.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b] Length = 122 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 88/122 (72%), Positives = 100/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +Q+I K+ IPPERRV QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAKKAQEIIEKVNIPPERRVAQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|52783997|ref|YP_089826.1| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|163119191|ref|YP_077426.2| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|319649090|ref|ZP_08003298.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2] gi|81386392|sp|Q65P81|RS13_BACLD RecName: Full=30S ribosomal protein S13 gi|52346499|gb|AAU39133.1| RpsM [Bacillus licheniformis ATCC 14580] gi|145902697|gb|AAU21788.2| ribosomal protein S13 [Bacillus licheniformis ATCC 14580] gi|317388790|gb|EFV69609.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2] Length = 121 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q I + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQILKEAGVSEDTRVRDLTEEELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|162149152|ref|YP_001603613.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|209545104|ref|YP_002277333.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|189044278|sp|A9H3J7|RS13_GLUDA RecName: Full=30S ribosomal protein S13 gi|161787729|emb|CAP57325.1| putative 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] gi|209532781|gb|ACI52718.1| ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5] Length = 125 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 80/122 (65%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV L YI+GIG +++IC +L IP ERRV++L + E+++IR+ I Sbjct: 1 MARIAGVNIPTNKRVTIGLRYIYGIGETKAEEICRRLEIPAERRVNELSDDEILKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK + Sbjct: 61 DSEYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|16125519|ref|NP_420083.1| 30S ribosomal protein S13 [Caulobacter crescentus CB15] gi|221234265|ref|YP_002516701.1| 30S ribosomal protein S13 [Caulobacter crescentus NA1000] gi|32363389|sp|Q9A8T1|RS13_CAUCR RecName: Full=30S ribosomal protein S13 gi|254811137|sp|B8H4F6|RS13_CAUCN RecName: Full=30S ribosomal protein S13 gi|13422603|gb|AAK23251.1| ribosomal protein S13 [Caulobacter crescentus CB15] gi|220963437|gb|ACL94793.1| SSU ribosomal protein S13P [Caulobacter crescentus NA1000] Length = 122 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 98/122 (80%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS+++I K+ I RRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|261417632|ref|YP_003251314.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61] gi|319765290|ref|YP_004130791.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52] gi|261374089|gb|ACX76832.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61] gi|317110156|gb|ADU92648.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52] Length = 121 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 61 G-CLKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|283853176|ref|ZP_06370429.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B] gi|283571434|gb|EFC19441.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B] Length = 123 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG ++ I + + L E IR+ I Sbjct: 1 MARIAGVDLPKNKRMDIALTYIYGIGRTTALRILEVTGVDWTKNSDALSPEETNTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR V NIKRLMD+GC+RGLRHRRGLP RGQRTHTNARTRK +G +A+ Sbjct: 61 EANHKVEGDLRRDVTANIKRLMDIGCFRGLRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|295688928|ref|YP_003592621.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756] gi|295430831|gb|ADG10003.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756] Length = 122 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 81/122 (66%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG KS+++I K+ I RRV+QL ++EV+ IR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLAIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154249792|ref|YP_001410617.1| 30S ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1] gi|171769363|sp|A7HM27|RS13_FERNB RecName: Full=30S ribosomal protein S13 gi|154153728|gb|ABS60960.1| ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1] Length = 123 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K+V AL Y++GIG + +IC + P++RV +L E E+ +I I Sbjct: 1 MARIVGVEIPSNKKVHIALRYLYGIGPTRAMEICKNTGVDPDKRVKELTEDEISKIASFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+Y+VEG+LR V NIKRLMD+GCYRGLRH+ GLPVRGQRT +NARTRK + + Sbjct: 61 QQNYKVEGELRTEVMRNIKRLMDIGCYRGLRHKLGLPVRGQRTRSNARTRKGPRPSRIKK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|289641141|ref|ZP_06473309.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata] gi|289509082|gb|EFD30013.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata] Length = 126 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S + + P+ RV L + E++++R+ I Sbjct: 1 MARLSGVDLPRDKRVEIALTYIFGIGRSRSLETLAATGVNPDTRVQDLTDEEIVRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +Y+VEGDL R V +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DANYRVEGDLHREVRQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|298345437|ref|YP_003718124.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063] gi|304390993|ref|ZP_07372945.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315655843|ref|ZP_07908741.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333] gi|315656231|ref|ZP_07909122.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235498|gb|ADI66630.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063] gi|304325876|gb|EFL93122.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315489907|gb|EFU79534.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333] gi|315493233|gb|EFU82833.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 124 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + + P+ RV L E E+I +R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIYGIGRTRATETLAATGVSPDTRVKDLTEDELIALRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNAR+RK + + Sbjct: 61 QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARSRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|259047531|ref|ZP_05737932.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175] gi|259035722|gb|EEW36977.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175] Length = 121 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +S+ I + + RV +L E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGITTSKQILAAANVNEDTRVRELTNDELDRIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|213693064|ref|YP_002323650.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254811130|sp|B7GNB6|RS13_BIFLI RecName: Full=30S ribosomal protein S13 gi|213524525|gb|ACJ53272.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459242|dbj|BAJ69863.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 125 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|330470147|ref|YP_004407890.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032] gi|328813118|gb|AEB47290.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032] Length = 126 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYEGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|23012204|ref|ZP_00052348.1| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 99/121 (81%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I+ Sbjct: 16 ARIAGVNIPTGKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETID 75 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK K +K Sbjct: 76 RDYVVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGKK 135 Query: 122 R 122 + Sbjct: 136 K 136 >gi|315225999|ref|ZP_07867787.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105] gi|315120131|gb|EFT83263.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105] Length = 123 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 1 MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK + + Sbjct: 61 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|224542263|ref|ZP_03682802.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM 15897] gi|224524805|gb|EEF93910.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM 15897] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG +++ I + + RV L E E +IR+ + Sbjct: 1 MARIAGIDIPRDKRVVVSLTYIYGIGPTTAKKILAAAGVSEDVRVKDLTEEEETKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + EGDLRR +NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK + Sbjct: 61 EH-IKTEGDLRRETQLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGKATPIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|89100323|ref|ZP_01173188.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911] gi|89084944|gb|EAR64080.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q + + + + RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGKNTAQKVLAEAGVSEDTRVRDLTEDELNKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|301057490|ref|ZP_07198586.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2] gi|300448418|gb|EFK12087.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2] Length = 122 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG SSQ + + I + + +L ++ IR+ I Sbjct: 1 MARIAGVDLPKGKRIEIALTYIYGIGRTSSQKMLTEAGINWDTKSDELTSEQIASIRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR V+MNIKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK + V + Sbjct: 61 DEKYTVEGDLRREVSMNIKRLMDLGLYRGLRHRRGLPVRGQRTSTNARTRKGPRRAVVGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|262038712|ref|ZP_06012072.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264] gi|261747264|gb|EEY34743.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG +S +I K + + +V L E +V +IR + Sbjct: 1 MARIAGVDIPRNKRVEISLTYIFGIGRSTSNEILEKAGVDKDIKVKDLTEEQVGKIRTIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL+D+ YRGLRHR GLPVRGQ+T TNARTRK K +A+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKMAIAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|260584440|ref|ZP_05852187.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633] gi|260157958|gb|EEW93027.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +S+ + + + RV L E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGVTTSKQVLAAANVSEDTRVRDLSNDELDRIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300309479|ref|YP_003773571.1| 30S ribosomal protein S13 [Herbaspirillum seropedicae SmR1] gi|300072264|gb|ADJ61663.1| 30S ribosomal subunit S13 protein [Herbaspirillum seropedicae SmR1] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I+GIG +QDIC +P ++V L ++E+ ++R I Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIYGIGRPRAQDICAATGVPTNKKVKDLDDNELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 AK-FVVEGDLRRELSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|238061097|ref|ZP_04605806.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149] gi|237882908|gb|EEP71736.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149] Length = 126 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|71905984|ref|YP_283571.1| 30S ribosomal protein S13 [Dechloromonas aromatica RCB] gi|91207698|sp|Q47J80|RS13_DECAR RecName: Full=30S ribosomal protein S13 gi|71845605|gb|AAZ45101.1| SSU ribosomal protein S13P [Dechloromonas aromatica RCB] Length = 120 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I GIG +Q IC+ + ++ L +S++ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIFGIGRTRAQKICDAAGVGRNVKMKDLSDSDMDRLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK K + Sbjct: 61 GK-FTVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|319948698|ref|ZP_08022819.1| 30S ribosomal protein S13 [Dietzia cinnamea P4] gi|319437600|gb|EFV92599.1| 30S ribosomal protein S13 [Dietzia cinnamea P4] Length = 122 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S +I + I P+ R L + ++ +R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILERTGISPDLRTKDLTDEQLTVLRDDI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGNYKVEGDLRREIQGDIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|187918366|ref|YP_001883929.1| 30S ribosomal protein S13 [Borrelia hermsii DAH] gi|226712700|sp|B2S0K3|RS13_BORHD RecName: Full=30S ribosomal protein S13 gi|119861214|gb|AAX17009.1| SSU ribosomal protein S13P [Borrelia hermsii DAH] Length = 125 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K + P++R +L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRARALEICEKTGVLPDKRAKELDNDEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|329768297|ref|ZP_08259798.1| 30S ribosomal protein S13 [Gemella haemolysans M341] gi|328837496|gb|EGF87125.1| 30S ribosomal protein S13 [Gemella haemolysans M341] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K+SQ I + + + RV L ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK K + Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|317496166|ref|ZP_07954526.1| 30S ribosomal protein S13 [Gemella moribillum M424] gi|316913741|gb|EFV35227.1| 30S ribosomal protein S13 [Gemella moribillum M424] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG K++Q I + + + RV L ++ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGLKTAQKILKEAGVSEDIRVKDLSGEQLDKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T N+RTRK K + Sbjct: 61 D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|291613259|ref|YP_003523416.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1] gi|291583371|gb|ADE11029.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1] Length = 121 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I+GIG +Q IC I +V + +S++ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIYGIGRTRAQQICAAAGIVTSTKVKDISDSDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLP RGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREISMNIKRLMDLGCYRGLRHRRGLPCRGQRTRTNARTRKGPRKSIAGA 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] Length = 136 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 12 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 71 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 72 EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 131 Query: 121 KR 122 K+ Sbjct: 132 KK 133 >gi|167748454|ref|ZP_02420581.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662] gi|317472013|ref|ZP_07931345.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA] gi|167652446|gb|EDR96575.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662] gi|316900417|gb|EFV22399.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA] Length = 122 Score = 175 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SS+ I ++ + P+ RV L + EV +I + I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILSEANVNPDTRVRDLTDDEVRRISEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR +A+NIKRL ++G YRG RHR+GLP RGQ+T TNART K K + Sbjct: 61 SESQTVEGDLRREIALNIKRLKEIGSYRGKRHRQGLPCRGQKTKTNARTCKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319938483|ref|ZP_08012877.1| 30S ribosomal protein [Coprobacillus sp. 29_1] gi|319806399|gb|EFW03066.1| 30S ribosomal protein [Coprobacillus sp. 29_1] Length = 121 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ IC I + RV L E E +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGATTAKKICEATGISEDTRVKDLTEEEEGKIRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ ++VEGDLRR A+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK + + Sbjct: 61 EK-FKVEGDLRRDTALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKARPIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|90962382|ref|YP_536298.1| 30S ribosomal protein S13 [Lactobacillus salivarius UCC118] gi|227891568|ref|ZP_04009373.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741] gi|301300217|ref|ZP_07206429.1| 30S ribosomal protein S13 [Lactobacillus salivarius ACS-116-V-Col5a] gi|122448614|sp|Q1WSB4|RS13_LACS1 RecName: Full=30S ribosomal protein S13 gi|90821576|gb|ABE00215.1| SSU ribosomal protein S13P [Lactobacillus salivarius UCC118] gi|227866715|gb|EEJ74136.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741] gi|300852158|gb|EFK79830.1| 30S ribosomal protein S13 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 121 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV L YI+GIG ++Q I ++ + + RV L + +IR + Sbjct: 1 MARIAGVDLPRNKRVVIGLTYIYGIGNSTAQKILSEAGVSEDVRVRDLTADQEDKIRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V++NIKRL ++G YRGLRHRR LPVRGQ T NARTRK + Sbjct: 61 DK-YKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPVRGQNTKNNARTRKGPAVSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|94312225|ref|YP_585435.1| 30S ribosomal protein S13 [Cupriavidus metallidurans CH34] gi|194291000|ref|YP_002006907.1| 30S ribosomal protein s13 [Cupriavidus taiwanensis LMG 19424] gi|158706270|sp|Q1LI60|RS13_RALME RecName: Full=30S ribosomal protein S13 gi|226712725|sp|B3R7E6|RS13_CUPTR RecName: Full=30S ribosomal protein S13 gi|93356077|gb|ABF10166.1| 30S ribosomal subunit protein S13 [Cupriavidus metallidurans CH34] gi|193224835|emb|CAQ70846.1| 30S ribosomal subunit protein S13 [Cupriavidus taiwanensis LMG 19424] Length = 121 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+GIG ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGIGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163840860|ref|YP_001625265.1| 30S ribosomal protein S13 [Renibacterium salmoninarum ATCC 33209] gi|189044289|sp|A9WSR3|RS13_RENSM RecName: Full=30S ribosomal protein S13 gi|162954336|gb|ABY23851.1| SSU ribosomal protein S13P [Renibacterium salmoninarum ATCC 33209] Length = 125 Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G + + I P+ RV L ++E++Q+R I Sbjct: 1 MARLAGVDLPREKRLEVALTYIYGVGKTRAHKTLAETGISPDVRVKDLSDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y G+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EVNYKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149195171|ref|ZP_01872262.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2] gi|149134723|gb|EDM23208.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2] Length = 122 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K++ AL YI+GIG +S+ I I P +RV++L E EV + + I Sbjct: 1 MARIAGIDLPKNKKIEYALPYIYGIGLTTSRKILKDTGIDPNKRVYELTEDEVSILNKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK K A+ Sbjct: 61 QNNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGKRKTVGAK 120 Query: 121 KR 122 + Sbjct: 121 AK 122 >gi|69247193|ref|ZP_00604255.1| Ribosomal protein S13 [Enterococcus faecium DO] gi|227550743|ref|ZP_03980792.1| ribosomal protein S13 [Enterococcus faecium TX1330] gi|257878748|ref|ZP_05658401.1| ribosomal protein S13 [Enterococcus faecium 1,230,933] gi|257881390|ref|ZP_05661043.1| ribosomal protein S13 [Enterococcus faecium 1,231,502] gi|257885657|ref|ZP_05665310.1| ribosomal protein S13 [Enterococcus faecium 1,231,501] gi|257887998|ref|ZP_05667651.1| ribosomal protein S13 [Enterococcus faecium 1,141,733] gi|257890607|ref|ZP_05670260.1| ribosomal protein S13 [Enterococcus faecium 1,231,410] gi|257893198|ref|ZP_05672851.1| ribosomal protein S13 [Enterococcus faecium 1,231,408] gi|257896383|ref|ZP_05676036.1| ribosomal protein S13 [Enterococcus faecium Com12] gi|257899358|ref|ZP_05679011.1| ribosomal protein S13 [Enterococcus faecium Com15] gi|258615187|ref|ZP_05712957.1| 30S ribosomal protein S13 [Enterococcus faecium DO] gi|260558311|ref|ZP_05830507.1| ribosomal protein S13 [Enterococcus faecium C68] gi|261207016|ref|ZP_05921705.1| ribosomal protein S13 [Enterococcus faecium TC 6] gi|289565349|ref|ZP_06445799.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF] gi|293379469|ref|ZP_06625613.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1] gi|293553902|ref|ZP_06674508.1| 30S ribosomal protein S13 [Enterococcus faecium E1039] gi|293562970|ref|ZP_06677437.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162] gi|293567908|ref|ZP_06679249.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071] gi|293570707|ref|ZP_06681757.1| ribosomal protein S13p/S18e [Enterococcus faecium E980] gi|294615370|ref|ZP_06695243.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636] gi|294618296|ref|ZP_06697877.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679] gi|294621102|ref|ZP_06700293.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317] gi|314937632|ref|ZP_07844958.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04] gi|314942869|ref|ZP_07849682.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C] gi|314947995|ref|ZP_07851399.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082] gi|314950912|ref|ZP_07853981.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A] gi|314991440|ref|ZP_07856917.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B] gi|314995039|ref|ZP_07860159.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01] gi|68194958|gb|EAN09426.1| Ribosomal protein S13 [Enterococcus faecium DO] gi|227180204|gb|EEI61176.1| ribosomal protein S13 [Enterococcus faecium TX1330] gi|257812976|gb|EEV41734.1| ribosomal protein S13 [Enterococcus faecium 1,230,933] gi|257817048|gb|EEV44376.1| ribosomal protein S13 [Enterococcus faecium 1,231,502] gi|257821513|gb|EEV48643.1| ribosomal protein S13 [Enterococcus faecium 1,231,501] gi|257824052|gb|EEV50984.1| ribosomal protein S13 [Enterococcus faecium 1,141,733] gi|257826967|gb|EEV53593.1| ribosomal protein S13 [Enterococcus faecium 1,231,410] gi|257829577|gb|EEV56184.1| ribosomal protein S13 [Enterococcus faecium 1,231,408] gi|257832948|gb|EEV59369.1| ribosomal protein S13 [Enterococcus faecium Com12] gi|257837270|gb|EEV62344.1| ribosomal protein S13 [Enterococcus faecium Com15] gi|260075485|gb|EEW63791.1| ribosomal protein S13 [Enterococcus faecium C68] gi|260078644|gb|EEW66346.1| ribosomal protein S13 [Enterococcus faecium TC 6] gi|289162839|gb|EFD10689.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF] gi|291589493|gb|EFF21300.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071] gi|291591744|gb|EFF23380.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636] gi|291595390|gb|EFF26702.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679] gi|291599338|gb|EFF30364.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317] gi|291601954|gb|EFF32200.1| 30S ribosomal protein S13 [Enterococcus faecium E1039] gi|291605096|gb|EFF34563.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162] gi|291609179|gb|EFF38451.1| ribosomal protein S13p/S18e [Enterococcus faecium E980] gi|292641992|gb|EFF60158.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1] gi|313590765|gb|EFR69610.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01] gi|313593920|gb|EFR72765.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B] gi|313596921|gb|EFR75766.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A] gi|313598341|gb|EFR77186.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C] gi|313643009|gb|EFS07589.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04] gi|313645593|gb|EFS10173.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082] Length = 121 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + RV +L + IR + Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKILADAGVSEDVRVRELTNEQTDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPARAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|289423653|ref|ZP_06425452.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L] gi|289155903|gb|EFD04569.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +S +I K I + R+ L + EV +R+ I Sbjct: 1 MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGISKDARIKDLSDDEVNVLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +++NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK K + Sbjct: 61 DEDYLVEGDLRREISLNIKRLRDIKCYRGMRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|168187788|ref|ZP_02622423.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund] gi|169294364|gb|EDS76497.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 88/121 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG S++I + + P+ RV L E EV IR I Sbjct: 1 MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK + + Sbjct: 61 GKSFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|118473987|ref|YP_885903.1| 30S ribosomal protein S13 [Mycobacterium smegmatis str. MC2 155] gi|158706249|sp|A0QSL5|RS13_MYCS2 RecName: Full=30S ribosomal protein S13 gi|118175274|gb|ABK76170.1| ribosomal protein S13p/S18e [Mycobacterium smegmatis str. MC2 155] Length = 124 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S +I I R L + +V +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSNEILAATGIDKNMRTKDLTDDQVTVLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|73542841|ref|YP_297361.1| 30S ribosomal protein S13 [Ralstonia eutropha JMP134] gi|91207721|sp|Q46WG6|RS13_RALEJ RecName: Full=30S ribosomal protein S13 gi|72120254|gb|AAZ62517.1| SSU ribosomal protein S13P [Ralstonia eutropha JMP134] Length = 121 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+G+G ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|294790436|ref|ZP_06755594.1| 30S ribosomal protein S13 [Scardovia inopinata F0304] gi|294458333|gb|EFG26686.1| 30S ribosomal protein S13 [Scardovia inopinata F0304] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++IQ+R + Sbjct: 1 MARLAGVDIPNEKRIEVALTYIFGVGRTRAKETLEATGISPDIRVKDLTDEQLIQLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G+RHRR LPVRGQRT TNARTRK + + Sbjct: 61 EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|145225549|ref|YP_001136227.1| 30S ribosomal protein S13 [Mycobacterium gilvum PYR-GCK] gi|315445901|ref|YP_004078780.1| 30S ribosomal protein S13P [Mycobacterium sp. Spyr1] gi|189044282|sp|A4TEI2|RS13_MYCGI RecName: Full=30S ribosomal protein S13 gi|145218035|gb|ABP47439.1| SSU ribosomal protein S13P [Mycobacterium gilvum PYR-GCK] gi|315264204|gb|ADU00946.1| SSU ribosomal protein S13P [Mycobacterium sp. Spyr1] Length = 124 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G SQ+I I ++R L + +V Q+R I Sbjct: 1 MARLMGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGISRDQRTKDLTDDQVSQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|320160438|ref|YP_004173662.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1] gi|319994291|dbj|BAJ63062.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1] Length = 128 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 68/120 (56%), Positives = 84/120 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI+GIG +++ + P+ RV L E+EV +R I Sbjct: 1 MARIEGVDLPRNKRVEVALTYIYGIGPTRARETLAATKVNPDTRVKDLTEAEVNALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLRR V M+IKRL+++GCYRGLRHRR LPVRGQRT TNARTRK K R Sbjct: 61 ARNYTVEGDLRREVQMSIKRLIEIGCYRGLRHRRNLPVRGQRTRTNARTRKGPRKTVAGR 120 >gi|239918175|ref|YP_002957733.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] gi|259494685|sp|C5CC38|RS13_MICLC RecName: Full=30S ribosomal protein S13 gi|239839382|gb|ACS31179.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] Length = 122 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ I P RV L +++Q+R I Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225076417|ref|ZP_03719616.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens NRL30031/H210] gi|224952265|gb|EEG33474.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens NRL30031/H210] Length = 120 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E ++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEDQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|85709031|ref|ZP_01040097.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1] gi|85690565|gb|EAQ30568.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1] Length = 122 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 77/122 (63%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG ++ I +KL IP RV L + EV++IR+ I Sbjct: 1 MARIAGVNIPTNKRVIIALTYIHGIGRTTAVQIADKLGIPHTARVQDLTDEEVLRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR AMNIKRLMDL YRGLRHR LPVRGQRTHTNARTRK K + Sbjct: 61 DEAYTVEGDLRRNTAMNIKRLMDLRSYRGLRHRNQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|49074668|gb|AAT49419.1| PA4241 [synthetic construct] Length = 119 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|302869945|ref|YP_003838582.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029] gi|302572804|gb|ADL49006.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029] Length = 126 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++RV L + E++++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|158319569|ref|YP_001512076.1| 30S ribosomal protein S13 [Alkaliphilus oremlandii OhILAs] gi|166991597|sp|A8MLG6|RS13_ALKOO RecName: Full=30S ribosomal protein S13 gi|158139768|gb|ABW18080.1| ribosomal protein S13 [Alkaliphilus oremlandii OhILAs] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 65/113 (57%), Positives = 82/113 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG K+S +I I P+ R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPRDKRVEVGLTYIFGIGRKTSNNILAAAGINPDTRIKDLTEEEVNNLRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + D+ VEGDLRR +A+NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK Sbjct: 61 DADHHVEGDLRREIALNIKRLKEIRCYRGIRHIKGLPVRGQKTKTNARTRKGP 113 >gi|256831851|ref|YP_003160578.1| 30S ribosomal protein S13 [Jonesia denitrificans DSM 20603] gi|256685382|gb|ACV08275.1| ribosomal protein S13 [Jonesia denitrificans DSM 20603] Length = 124 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+G+G +Q I P+ RV L ++E++ +R + Sbjct: 1 MARLIGVDLPRDKRVEVALTYIYGVGRTRAQQTLEATGISPDVRVKDLGDTELVALRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|288818041|ref|YP_003432388.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] gi|288787440|dbj|BAI69187.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] gi|308751642|gb|ADO45125.1| 30S ribosomal protein S13 [Hydrogenobacter thermophilus TK-6] Length = 126 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K++ AL Y++GIG+ S++IC K IP +R+ +L E+ IR+ I Sbjct: 1 MARIAGVDLPDHKKLEVALTYLYGIGWSRSREICQKTGIPCTKRLGELTPDELNTIRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+Y+VEGDLRR V MNIKRLMD+G YRG+RH RGLPVRGQ+T TN+RTRK K Sbjct: 61 EQNYKVEGDLRREVQMNIKRLMDMGSYRGIRHSRGLPVRGQQTRTNSRTRKGKRKTVGGT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15599437|ref|NP_252931.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1] gi|107103757|ref|ZP_01367675.1| hypothetical protein PaerPA_01004828 [Pseudomonas aeruginosa PACS2] gi|116052276|ref|YP_788878.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889430|ref|YP_002438294.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58] gi|254237105|ref|ZP_04930428.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719] gi|296387202|ref|ZP_06876701.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAb1] gi|313111395|ref|ZP_07797200.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016] gi|32363411|sp|Q9HWF7|RS13_PSEAE RecName: Full=30S ribosomal protein S13 gi|122261425|sp|Q02T58|RS13_PSEAB RecName: Full=30S ribosomal protein S13 gi|226712778|sp|B7V665|RS13_PSEA8 RecName: Full=30S ribosomal protein S13 gi|9950458|gb|AAG07629.1|AE004841_7 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1] gi|115587497|gb|ABJ13512.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14] gi|126169036|gb|EAZ54547.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719] gi|218769653|emb|CAW25413.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58] gi|310883702|gb|EFQ42296.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016] gi|310941721|dbj|BAJ24214.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa] Length = 118 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|229818216|ref|ZP_04448498.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM 20098] gi|229784467|gb|EEP20581.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM 20098] Length = 125 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G ++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKQTLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANFKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|167755936|ref|ZP_02428063.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402] gi|237733253|ref|ZP_04563734.1| 30S ribosomal protein S13 [Mollicutes bacterium D7] gi|167703928|gb|EDS18507.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402] gi|229383634|gb|EEO33725.1| 30S ribosomal protein S13 [Coprobacillus sp. D7] Length = 121 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q+I K+ I RV L E E+ IR+ I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILKKVGINENTRVKDLTEDEIGTIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKAKPIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|332178478|gb|AEE14167.1| 30S ribosomal protein S13 [Thermodesulfobium narugense DSM 14796] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++ K+ AL YI+GIG + I N + PE+R+ +L E E+I++R + Sbjct: 1 MARIAGVDLAENKKAWVALTYIYGIGKPLAFKILNATGVDPEKRIKELSEDEIIKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEGDLRR VA NI+RL+DLG YRGLRHRRGLPVRGQRT TNARTRK + A+ Sbjct: 61 EKNYKVEGDLRREVAQNIRRLIDLGTYRGLRHRRGLPVRGQRTRTNARTRKGPKRLIGAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|264680563|ref|YP_003280473.1| ribosomal protein S13 [Comamonas testosteroni CNB-2] gi|299532873|ref|ZP_07046260.1| 30S ribosomal protein S13 [Comamonas testosteroni S44] gi|262211079|gb|ACY35177.1| ribosomal protein S13 [Comamonas testosteroni CNB-2] gi|298719097|gb|EFI60067.1| 30S ribosomal protein S13 [Comamonas testosteroni S44] Length = 121 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG +++ IC I ++V L ++++ +IR + Sbjct: 1 MARIAGINIPPHKHAEIGLTAIYGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 -NPMTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|146340079|ref|YP_001205127.1| 30S ribosomal protein S13 [Bradyrhizobium sp. ORS278] gi|158706215|sp|A4YSL4|RS13_BRASO RecName: Full=30S ribosomal protein S13 gi|146192885|emb|CAL76890.1| 30S ribosomal subunit protein S13 [Bradyrhizobium sp. ORS278] Length = 122 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 96/122 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRV+ AL YIHGIG K + +I K+ I +RRV+QL + EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVLIALQYIHGIGPKIAGEIIEKVKIAEDRRVNQLSDQEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|56416982|ref|YP_154056.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries] gi|222475350|ref|YP_002563767.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida] gi|254995158|ref|ZP_05277348.1| 30S ribosomal protein S13 [Anaplasma marginale str. Mississippi] gi|255003332|ref|ZP_05278296.1| 30S ribosomal protein S13 [Anaplasma marginale str. Puerto Rico] gi|255004456|ref|ZP_05279257.1| 30S ribosomal protein S13 [Anaplasma marginale str. Virginia] gi|81358978|sp|Q5PA79|RS13_ANAMM RecName: Full=30S ribosomal protein S13 gi|254811123|sp|B9KJ49|RS13_ANAMF RecName: Full=30S ribosomal protein S13 gi|56388214|gb|AAV86801.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries] gi|222419488|gb|ACM49511.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida] Length = 123 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I + V L + +V++IR I Sbjct: 1 MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICEGCGIGEDVLVSSLSDEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148377784|ref|YP_001256660.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2] gi|291320471|ref|YP_003515735.1| 30S ribosomal protein S13 [Mycoplasma agalactiae] gi|313678390|ref|YP_004056130.1| 30S ribosomal protein S13 [Mycoplasma bovis PG45] gi|226712766|sp|A5IYW1|RS13_MYCAP RecName: Full=30S ribosomal protein S13 gi|148291830|emb|CAL59220.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2] gi|290752806|emb|CBH40781.1| 30S ribosomal protein S13 [Mycoplasma agalactiae] gi|312950177|gb|ADR24772.1| ribosomal protein S13 [Mycoplasma bovis PG45] Length = 123 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 85/121 (70%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG S+Q+IC K I RV L E+++ IR+ I Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGRTSAQEICAKAKIDENIRVKDLSEAQLSAIRE-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T +NARTRK K + Sbjct: 60 AKEYVTEGDLRREVSLNIKRLMEVKCYRGIRHRKGLPVRGQSTKSNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis L2-32] gi|162229911|ref|YP_909208.2| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] gi|171741250|ref|ZP_02917057.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC 27678] gi|212716588|ref|ZP_03324716.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM 16992] gi|224283733|ref|ZP_03647055.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] gi|225351021|ref|ZP_03742044.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium pseudocatenulatum DSM 20438] gi|283455390|ref|YP_003359954.1| 30S ribosomal protein S13P [Bifidobacterium dentium Bd1] gi|306823544|ref|ZP_07456919.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679] gi|309802871|ref|ZP_07696972.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022] gi|310288000|ref|YP_003939259.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17] gi|311064873|ref|YP_003971599.1| 30S ribosomal protein S13P RpsM [Bifidobacterium bifidum PRL2010] gi|313140889|ref|ZP_07803082.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] gi|158706364|sp|A1A093|RS13_BIFAA RecName: Full=30S ribosomal protein S13 gi|154084634|gb|EDN83679.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis L2-32] gi|171276864|gb|EDT44525.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC 27678] gi|212660292|gb|EEB20867.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM 16992] gi|225158477|gb|EEG71719.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium pseudocatenulatum DSM 20438] gi|283102024|gb|ADB09130.1| rpsM SSU ribosomal protein S13P [Bifidobacterium dentium Bd1] gi|304553251|gb|EFM41163.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679] gi|308220338|gb|EFO76649.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022] gi|309251937|gb|ADO53685.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17] gi|310867193|gb|ADP36562.1| RpsM SSU ribosomal protein S13P [Bifidobacterium bifidum PRL2010] gi|313133399|gb|EFR51016.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171] Length = 125 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226227382|ref|YP_002761488.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27] gi|259494679|sp|C1A4J3|RS13_GEMAT RecName: Full=30S ribosomal protein S13 gi|226090573|dbj|BAH39018.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27] Length = 125 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K+V L YI GIG K++Q I + +RV L ++++ ++RQ I Sbjct: 1 MARIAGVDLPREKKVEIGLTYIFGIGRKTAQKILEASGVSSAQRVRDLNDNDLNKLRQEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++++VEG LR VAMNIKRLMD+G YRG RHRRGLPVRGQRTHTNART+K + + Sbjct: 61 ERNHRVEGALRTEVAMNIKRLMDIGSYRGTRHRRGLPVRGQRTHTNARTKKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114315414|gb|ABI61474.1| SSU ribosomal protein S13P [Granulibacter bethesdensis CGDNIH1] Length = 137 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 81/121 (66%), Positives = 98/121 (80%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV +L YI+GIG +Q IC +L+IP ERRV+QL + E+++IR+ I+ Sbjct: 14 ARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELID 73 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK +K Sbjct: 74 REYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGKK 133 Query: 122 R 122 + Sbjct: 134 K 134 >gi|160894731|ref|ZP_02075506.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50] gi|156863665|gb|EDO57096.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50] Length = 122 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SSQ I + + P+ R + L + EV +I + I Sbjct: 1 MARISGVDLPRDKRVEIGLTYVYGIGLASSQRILKEANVNPDTRCNDLTDDEVRRISEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VEGDLRR VA+NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 NATQTVEGDLRREVALNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86606121|ref|YP_474884.1| 30S ribosomal protein S13 [Synechococcus sp. JA-3-3Ab] gi|123506458|sp|Q2JUJ3|RS13_SYNJA RecName: Full=30S ribosomal protein S13 gi|86554663|gb|ABC99621.1| ribosomal protein S13 [Synechococcus sp. JA-3-3Ab] Length = 127 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 71/117 (60%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG S+ I K I P+ R L ++EV +R + Sbjct: 1 MARIAGVDIPRDKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +YQVEGDLRR AMNIKRL+D+G YRG RHR LPVRGQRT TNARTRK K Sbjct: 61 EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLNLPVRGQRTRTNARTRKGVRKTV 117 >gi|260592741|ref|ZP_05858199.1| 30S ribosomal protein S13 [Prevotella veroralis F0319] gi|260535272|gb|EEX17889.1| 30S ribosomal protein S13 [Prevotella veroralis F0319] Length = 146 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 21 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 80 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 81 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 133 >gi|325510514|gb|ADZ22150.1| 30S ribosomal protein S13 [Clostridium acetobutylicum EA 2018] Length = 125 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 66/113 (58%), Positives = 86/113 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG SS+ I ++ PE RV L E EV +R I Sbjct: 3 MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 63 NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 115 >gi|323357348|ref|YP_004223744.1| ribosomal protein S13 [Microbacterium testaceum StLB037] gi|323273719|dbj|BAJ73864.1| ribosomal protein S13 [Microbacterium testaceum StLB037] Length = 124 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV AL YI+G+G S +I N I + RV L + +++ +R I Sbjct: 1 MARLAGVDIPRDKRVVIALTYIYGVGRTRSVEILNATGISQDVRVKDLTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGTYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15925216|ref|NP_372750.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50] gi|15927806|ref|NP_375339.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus N315] gi|21283874|ref|NP_646962.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2] gi|49484442|ref|YP_041666.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA252] gi|49487008|ref|YP_044229.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650810|ref|YP_187025.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus COL] gi|82751816|ref|YP_417557.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122] gi|87159948|ref|YP_494815.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196138|ref|YP_500955.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268666|ref|YP_001247609.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH9] gi|150394731|ref|YP_001317406.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1] gi|151222340|ref|YP_001333162.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980541|ref|YP_001442800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3] gi|161510430|ref|YP_001576089.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140172|ref|ZP_03564665.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253316987|ref|ZP_04840200.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729892|ref|ZP_04864057.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734365|ref|ZP_04868530.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH130] gi|255007006|ref|ZP_05145607.2| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257423711|ref|ZP_05600140.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus 55/2053] gi|257426389|ref|ZP_05602791.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322] gi|257429029|ref|ZP_05605416.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 68-397] gi|257431675|ref|ZP_05608038.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus E1410] gi|257434635|ref|ZP_05610686.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus M876] gi|257794572|ref|ZP_05643551.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781] gi|258408826|ref|ZP_05681110.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763] gi|258422425|ref|ZP_05685337.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719] gi|258422673|ref|ZP_05685578.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635] gi|258439813|ref|ZP_05690559.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299] gi|258442631|ref|ZP_05691191.1| ribosomal protein S13 [Staphylococcus aureus A8115] gi|258446671|ref|ZP_05694826.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300] gi|258450211|ref|ZP_05698303.1| ribosomal protein S13 [Staphylococcus aureus A6224] gi|258450778|ref|ZP_05698837.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948] gi|258455417|ref|ZP_05703377.1| ribosomal protein S13 [Staphylococcus aureus A5937] gi|269203859|ref|YP_003283128.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED98] gi|282893665|ref|ZP_06301897.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117] gi|282902129|ref|ZP_06310022.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C160] gi|282906569|ref|ZP_06314417.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909539|ref|ZP_06317350.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911787|ref|ZP_06319583.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WBG10049] gi|282915075|ref|ZP_06322852.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M899] gi|282917571|ref|ZP_06325323.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus D139] gi|282920801|ref|ZP_06328519.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C427] gi|282922095|ref|ZP_06329791.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765] gi|282925706|ref|ZP_06333354.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C101] gi|282926772|ref|ZP_06334399.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102] gi|283767318|ref|ZP_06340233.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19] gi|283959004|ref|ZP_06376445.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus A017934/97] gi|284025252|ref|ZP_06379650.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 132] gi|293497479|ref|ZP_06665333.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 58-424] gi|293511054|ref|ZP_06669751.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus M809] gi|293549660|ref|ZP_06672332.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M1015] gi|294848759|ref|ZP_06789504.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754] gi|295404902|ref|ZP_06814715.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819] gi|295428809|ref|ZP_06821433.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275983|ref|ZP_06858490.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MR1] gi|297209961|ref|ZP_06926357.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297243960|ref|ZP_06927850.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796] gi|297589705|ref|ZP_06948346.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8] gi|300910973|ref|ZP_07128423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH70] gi|304379410|ref|ZP_07362145.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039351|sp|P66388|RS13_STAAN RecName: Full=30S ribosomal protein S13 gi|54039352|sp|P66389|RS13_STAAW RecName: Full=30S ribosomal protein S13 gi|54042123|sp|P66387|RS13_STAAM RecName: Full=30S ribosomal protein S13 gi|56749504|sp|Q6G795|RS13_STAAS RecName: Full=30S ribosomal protein S13 gi|56749551|sp|Q6GEK7|RS13_STAAR RecName: Full=30S ribosomal protein S13 gi|81693973|sp|Q5HDY2|RS13_STAAC RecName: Full=30S ribosomal protein S13 gi|91207727|sp|Q2YYM0|RS13_STAAB RecName: Full=30S ribosomal protein S13 gi|122538866|sp|Q2FW30|RS13_STAA8 RecName: Full=30S ribosomal protein S13 gi|123484808|sp|Q2FER3|RS13_STAA3 RecName: Full=30S ribosomal protein S13 gi|166231927|sp|A7X5C7|RS13_STAA1 RecName: Full=30S ribosomal protein S13 gi|172049007|sp|A6QJ68|RS13_STAAE RecName: Full=30S ribosomal protein S13 gi|189044299|sp|A6U3V1|RS13_STAA2 RecName: Full=30S ribosomal protein S13 gi|189044300|sp|A5IV10|RS13_STAA9 RecName: Full=30S ribosomal protein S13 gi|189044301|sp|A8Z333|RS13_STAAT RecName: Full=30S ribosomal protein S13 gi|13702026|dbj|BAB43318.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus N315] gi|14247999|dbj|BAB58388.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu50] gi|21205316|dbj|BAB96010.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2] gi|49242571|emb|CAG41292.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA252] gi|49245451|emb|CAG43928.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284996|gb|AAW37090.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus COL] gi|82657347|emb|CAI81788.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122] gi|87125922|gb|ABD20436.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203696|gb|ABD31506.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741735|gb|ABQ50033.1| SSU ribosomal protein S13P [Staphylococcus aureus subsp. aureus JH9] gi|149947183|gb|ABR53119.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1] gi|150375140|dbj|BAF68400.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722676|dbj|BAF79093.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3] gi|160369239|gb|ABX30210.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726339|gb|EES95068.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727682|gb|EES96411.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH130] gi|257272729|gb|EEV04831.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus 55/2053] gi|257276020|gb|EEV07471.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279510|gb|EEV10097.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 68-397] gi|257282554|gb|EEV12686.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus E1410] gi|257285231|gb|EEV15347.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus M876] gi|257788544|gb|EEV26884.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781] gi|257840509|gb|EEV64969.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763] gi|257841856|gb|EEV66293.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719] gi|257847084|gb|EEV71093.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635] gi|257847589|gb|EEV71591.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299] gi|257851752|gb|EEV75686.1| ribosomal protein S13 [Staphylococcus aureus A8115] gi|257854739|gb|EEV77687.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300] gi|257856303|gb|EEV79212.1| ribosomal protein S13 [Staphylococcus aureus A6224] gi|257861561|gb|EEV84363.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948] gi|257862628|gb|EEV85396.1| ribosomal protein S13 [Staphylococcus aureus A5937] gi|262076149|gb|ACY12122.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED98] gi|269941815|emb|CBI50225.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TW20] gi|282312535|gb|EFB42939.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C101] gi|282315216|gb|EFB45600.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C427] gi|282318533|gb|EFB48891.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus D139] gi|282320796|gb|EFB51130.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M899] gi|282323483|gb|EFB53799.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326518|gb|EFB56820.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329468|gb|EFB58989.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Btn1260] gi|282591223|gb|EFB96296.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102] gi|282593563|gb|EFB98556.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765] gi|282596588|gb|EFC01547.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus C160] gi|282763723|gb|EFC03851.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117] gi|283461197|gb|EFC08281.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19] gi|283471448|emb|CAQ50659.1| ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus ST398] gi|283788596|gb|EFC27423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus A017934/97] gi|285817888|gb|ADC38375.1| 30S ribosomal protein S13 [Staphylococcus aureus 04-02981] gi|290918707|gb|EFD95783.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus M1015] gi|291096410|gb|EFE26668.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 58-424] gi|291466041|gb|EFF08570.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus M809] gi|294824138|gb|EFG40562.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754] gi|294969847|gb|EFG45865.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819] gi|295127158|gb|EFG56800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885634|gb|EFH24571.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178738|gb|EFH37983.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796] gi|297578216|gb|EFH96929.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8] gi|298695483|gb|ADI98705.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ED133] gi|300887953|gb|EFK83148.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH70] gi|302333862|gb|ADL24055.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JKD6159] gi|302752099|gb|ADL66276.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341942|gb|EFM07846.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312437363|gb|ADQ76434.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus TCH60] gi|312830575|emb|CBX35417.1| 30S ribosomal protein S13 (BS14) [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129694|gb|EFT85685.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS03] gi|315193478|gb|EFU23874.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS00] gi|315198244|gb|EFU28575.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus CGS01] gi|320140236|gb|EFW32095.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143506|gb|EFW35287.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MRSA177] gi|323440094|gb|EGA97809.1| 30S ribosomal protein S13 [Staphylococcus aureus O11] gi|323442768|gb|EGB00394.1| 30S ribosomal protein S13 [Staphylococcus aureus O46] gi|329314909|gb|AEB89322.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus T0131] gi|329723637|gb|EGG60166.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21172] gi|329730351|gb|EGG66741.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21193] gi|329732010|gb|EGG68365.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 21189] Length = 121 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 D-GYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|315640138|ref|ZP_07895260.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952] gi|315484115|gb|EFU74589.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952] Length = 121 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + E RV L + IR I Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNDQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR + +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREINLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|206895241|ref|YP_002247310.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM 5265] gi|226712721|sp|B5Y963|RS13_COPPD RecName: Full=30S ribosomal protein S13 gi|206737858|gb|ACI16936.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM 5265] Length = 124 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P KR+V AL I+GIG +++DIC L I P +++ +L ++ ++ I Sbjct: 1 MARIVGVELPDNKRIVFALPRIYGIGKSTAEDICEALGIDPMQKLGELTPEQINTLQDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y+VEGDLRR VAMNIKRLMD+ CYRG+RH+RGLPVRGQRT NARTRK K A+ Sbjct: 61 TAHYKVEGDLRREVAMNIKRLMDIKCYRGIRHQRGLPVRGQRTRHNARTRKGPRKTVGAK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|325267154|ref|ZP_08133822.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394] gi|324981392|gb|EGC17036.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394] Length = 120 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG +++IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKNICEVAGIAPATKVKDLDESQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V MNIKRL+D+GCYRG+RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMNIKRLIDMGCYRGMRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|21223106|ref|NP_628885.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)] gi|256785798|ref|ZP_05524229.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] gi|289769690|ref|ZP_06529068.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] gi|6226063|sp|O86773|RS13_STRCO RecName: Full=30S ribosomal protein S13 gi|3449239|emb|CAA20383.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)] gi|289699889|gb|EFD67318.1| 30S ribosomal protein S13 [Streptomyces lividans TK24] Length = 126 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR V +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|113869408|ref|YP_727897.1| 30S ribosomal protein S13 [Ralstonia eutropha H16] gi|123328830|sp|Q0K642|RS13_RALEH RecName: Full=30S ribosomal protein S13 gi|113528184|emb|CAJ94529.1| SSU ribosomal protein S13 [Ralstonia eutropha H16] Length = 121 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K L I+G+G ++ IC +P +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|120553674|ref|YP_958025.1| 30S ribosomal protein S13 [Marinobacter aquaeolei VT8] gi|158706245|sp|A1TYL9|RS13_MARAV RecName: Full=30S ribosomal protein S13 gi|120323523|gb|ABM17838.1| SSU ribosomal protein S13P [Marinobacter aquaeolei VT8] Length = 118 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGKTTAQKLCDATGVKPDAKVKDLSDEQLEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVQMNIKRLKDLGCFRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116 >gi|239980031|ref|ZP_04702555.1| 30S ribosomal protein S13 [Streptomyces albus J1074] gi|291451888|ref|ZP_06591278.1| 30S ribosomal protein S13 [Streptomyces albus J1074] gi|291354837|gb|EFE81739.1| 30S ribosomal protein S13 [Streptomyces albus J1074] Length = 126 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLEATGVDPNARVRDLSEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254440445|ref|ZP_05053939.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307] gi|198255891|gb|EDY80205.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307] Length = 139 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 76/121 (62%), Positives = 88/121 (72%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP AKRV AL YI GIG S+ IC + I RRV++L ++EV+ IR+ I+ Sbjct: 19 ARIAGVNIPTAKRVPIALTYITGIGNTSAAAICEAVKIDVTRRVNELSDAEVLAIREHID 78 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +Y VEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK K +K Sbjct: 79 ANYMVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGKK 138 Query: 122 R 122 + Sbjct: 139 K 139 >gi|295401895|ref|ZP_06811858.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius C56-YS93] gi|312109286|ref|YP_003987602.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1] gi|294976025|gb|EFG51640.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius C56-YS93] gi|311214387|gb|ADP72991.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 61 SR-LKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|224477196|ref|YP_002634802.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus TM300] gi|254811165|sp|B9DM53|RS13_STACT RecName: Full=30S ribosomal protein S13 gi|222421803|emb|CAL28617.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus TM300] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+G+G ++ I + + P+ RV L + E+ +IR+ + Sbjct: 1 MARIAGIDIPREKRVVISLTYIYGVGKSTAAKILEEANVSPDTRVKDLTDDELGRIRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 DA-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|56418666|ref|YP_145984.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426] gi|138893808|ref|YP_001124261.1| 30S ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2] gi|196250999|ref|ZP_03149681.1| ribosomal protein S13 [Geobacillus sp. G11MC16] gi|297528507|ref|YP_003669782.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3] gi|81348360|sp|Q5L3R4|RS13_GEOKA RecName: Full=30S ribosomal protein S13 gi|158706233|sp|A4IJL2|RS13_GEOTN RecName: Full=30S ribosomal protein S13 gi|56378508|dbj|BAD74416.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426] gi|134265321|gb|ABO65516.1| Ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2] gi|196209471|gb|EDY04248.1| ribosomal protein S13 [Geobacillus sp. G11MC16] gi|297251759|gb|ADI25205.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 61 GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300508617|pdb|3MR8|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508672|pdb|3MS0|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s) Length = 117 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 70/117 (59%), Positives = 85/117 (72%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVA 117 >gi|311748490|ref|ZP_07722275.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1] gi|126577007|gb|EAZ81255.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1] Length = 125 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR L YI GIG S++ I +K I +++ + + E IR I Sbjct: 1 MARIAGVDIPDNKRGEIGLTYIFGIGRSSAKAILSKAGISFDKKAGEWDDDESTAIRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ EG L+ + +NIKRLMD+GCYRGLRHR+GLPVRGQ T NARTRK K + Sbjct: 61 AEEFRTEGVLKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQHTKNNARTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|319944773|ref|ZP_08019037.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599] gi|319742022|gb|EFV94445.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG +Q IC + I P ++V L ++E+ +IR + Sbjct: 1 MARIAGVNVPDRQHTVIGLTAIYGIGRARAQAICAAVGIEPSKKVRDLSDAEMERIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K GVA Sbjct: 61 GR-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359] gi|254811172|sp|B9K8B1|RS13_THENN RecName: Full=30S ribosomal protein S13 gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359] Length = 125 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+V AL YI+GIG S +I + P++RV +L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGVDPDKRVGELTDEEISKITKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++VEG+LR V NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK + Sbjct: 61 QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRKGPRPSRIKT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|299820979|ref|ZP_07052868.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601] gi|299818000|gb|EFI85235.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + PE R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKTTAEKVLAEAGVSPETRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|184200287|ref|YP_001854494.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201] gi|226712750|sp|B2GJ18|RS13_KOCRD RecName: Full=30S ribosomal protein S13 gi|183580517|dbj|BAG28988.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201] Length = 122 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+G+G + + I + RV L + +++++R I Sbjct: 1 MARLAGVDLPREKRLEVALTYIYGVGRTRALETLEATGISGDVRVKDLTDPQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|221064826|ref|ZP_03540931.1| ribosomal protein S13 [Comamonas testosteroni KF-1] gi|220709849|gb|EED65217.1| ribosomal protein S13 [Comamonas testosteroni KF-1] Length = 121 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG +++ IC I ++V L ++++ +IR + Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 -NPMTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|325135171|gb|EGC57797.1| ribosomal protein S13p/S18e [Neisseria meningitidis M13399] Length = 120 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P+ + L E+++ +R I Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|296141065|ref|YP_003648308.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162] gi|296029199|gb|ADG79969.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162] Length = 123 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + +I + P+ R L + ++ ++R I Sbjct: 1 MARLMGVDLPREKRMEIALTYIYGIGRTRATEILTATGVSPDLRSKDLSDEDLTKLRDFI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E DY+VEGDLRR V +I+R +++ CY+G+RHRRGLPVRGQRT TNARTRK K Sbjct: 61 EGTDYKVEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|309389909|gb|ADO77789.1| SSU ribosomal protein S13P [Halanaerobium praevalens DSM 2228] Length = 126 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 67/123 (54%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++Q I I + R+ L E+E+ +R+ I Sbjct: 1 MARIEGVDLPRNKRVEIGLTYIYGIGRTTAQSIVANTGINSDTRIKDLTEAEISDLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 +++Y VEG+LRR +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK K GV Sbjct: 61 DENYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVT 120 Query: 120 RKR 122 + + Sbjct: 121 KTK 123 >gi|315501406|ref|YP_004080293.1| 30S ribosomal protein s13 [Micromonospora sp. L5] gi|315408025|gb|ADU06142.1| 30S ribosomal protein S13 [Micromonospora sp. L5] Length = 126 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++RV L + E++++R I Sbjct: 1 MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|258513665|ref|YP_003189887.1| 30S ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771] gi|257777370|gb|ACV61264.1| ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771] Length = 123 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 72/123 (58%), Positives = 95/123 (77%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG K+SQ I K + P+ R+ L E E+ ++R+ I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIYGIGKKTSQKIIEKTGVNPDTRIRNLTEDEINKLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119 E++ ++EGDLRR +A+NIKRL+++GCYRGLRHRRGLPVRGQ+T TNARTRK + GV Sbjct: 61 EKNCKIEGDLRREIALNIKRLIEIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRTVGVR 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|15828062|ref|NP_302325.1| 30S ribosomal protein S13 [Mycobacterium leprae TN] gi|221230539|ref|YP_002503955.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923] gi|7388130|sp|Q9X7A1|RS13_MYCLE RecName: Full=30S ribosomal protein S13 gi|254811158|sp|B8ZSH9|RS13_MYCLB RecName: Full=30S ribosomal protein S13 gi|4539115|emb|CAB39836.1| putative 30S ribosomal protein S13 [Mycobacterium leprae] gi|13093615|emb|CAC30915.1| 30S ribosomal protein S13 [Mycobacterium leprae] gi|219933646|emb|CAR72057.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923] Length = 124 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIYGIGRTRANEILEATGIERDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R M++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKMEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|114319641|ref|YP_741324.1| 30S ribosomal protein S13 [Alkalilimnicola ehrlichii MLHE-1] gi|122312437|sp|Q0ABF3|RS13_ALHEH RecName: Full=30S ribosomal protein S13 gi|114226035|gb|ABI55834.1| SSU ribosomal protein S13P [Alkalilimnicola ehrlichii MLHE-1] Length = 119 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 71/120 (59%), Positives = 89/120 (74%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G ++ IC++ +P +R+V +L E E+ IR A+ Sbjct: 1 MARIAGVNIPVHKHAWVALTSIYGVGRTRAKAICDEAGVPRDRKVKELTEQELEAIRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR VAM+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK +G + Sbjct: 61 GK-YEVEGDLRRAVAMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRKGPRRGPAGK 119 >gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] gi|241320007|gb|EER56388.1| 30S ribosomal protein S13 [Neisseria flavescens SK114] Length = 120 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPSTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|15676092|ref|NP_273223.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58] gi|59802138|ref|YP_208850.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090] gi|121634039|ref|YP_974284.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18] gi|161870897|ref|YP_001600072.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442] gi|218767145|ref|YP_002341657.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491] gi|239997948|ref|ZP_04717872.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|240015074|ref|ZP_04721987.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI18] gi|240017523|ref|ZP_04724063.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA6140] gi|240081666|ref|ZP_04726209.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|240113944|ref|ZP_04728434.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|240116678|ref|ZP_04730740.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|240118900|ref|ZP_04732962.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|240122146|ref|ZP_04735108.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID24-1] gi|240124438|ref|ZP_04737394.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|240124693|ref|ZP_04737579.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|240129114|ref|ZP_04741775.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|254494699|ref|ZP_05107870.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291] gi|254805791|ref|YP_003084012.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14] gi|260439563|ref|ZP_05793379.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|268593798|ref|ZP_06127965.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|268597763|ref|ZP_06131930.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|268600008|ref|ZP_06134175.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|268602345|ref|ZP_06136512.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|268604609|ref|ZP_06138776.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|268683066|ref|ZP_06149928.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|268683267|ref|ZP_06150129.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|268687496|ref|ZP_06154358.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|291042799|ref|ZP_06568540.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|293398180|ref|ZP_06642385.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62] gi|296313387|ref|ZP_06863328.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768] gi|304388965|ref|ZP_07371012.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091] gi|54039350|sp|P66386|RS13_NEIMB RecName: Full=30S ribosomal protein S13 gi|54042122|sp|P66385|RS13_NEIMA RecName: Full=30S ribosomal protein S13 gi|75355451|sp|Q5F5U9|RS13_NEIG1 RecName: Full=30S ribosomal protein S13 gi|158706255|sp|A1KRJ6|RS13_NEIMF RecName: Full=30S ribosomal protein S13 gi|189044283|sp|A9M3U3|RS13_NEIM0 RecName: Full=30S ribosomal protein S13 gi|7225383|gb|AAF40622.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58] gi|59719033|gb|AAW90438.1| putative 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090] gi|120865745|emb|CAM09474.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18] gi|121051153|emb|CAM07424.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491] gi|161596450|gb|ABX74110.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442] gi|226513739|gb|EEH63084.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291] gi|254669333|emb|CBA08378.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14] gi|254670760|emb|CBA07029.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha153] gi|254672690|emb|CBA06582.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha275] gi|261391701|emb|CAX49150.1| 30S ribosomal protein S13 [Neisseria meningitidis 8013] gi|268547187|gb|EEZ42605.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02] gi|268551551|gb|EEZ46570.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19] gi|268584139|gb|EEZ48815.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11] gi|268586476|gb|EEZ51152.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18] gi|268588740|gb|EEZ53416.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1] gi|268623350|gb|EEZ55750.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332] gi|268623551|gb|EEZ55951.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679] gi|268627780|gb|EEZ60180.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035] gi|291013233|gb|EFE05199.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2] gi|291611443|gb|EFF40513.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62] gi|296840097|gb|EFH24035.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768] gi|304337099|gb|EFM03286.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091] gi|308388381|gb|ADO30701.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha710] gi|319411351|emb|CBY91762.1| 30S ribosomal protein S13 [Neisseria meningitidis WUE 2594] gi|325129084|gb|EGC51933.1| ribosomal protein S13p/S18e [Neisseria meningitidis N1568] gi|325131055|gb|EGC53779.1| ribosomal protein S13p/S18e [Neisseria meningitidis OX99.30304] gi|325133077|gb|EGC55749.1| ribosomal protein S13p/S18e [Neisseria meningitidis M6190] gi|325137223|gb|EGC59818.1| ribosomal protein S13p/S18e [Neisseria meningitidis M0579] gi|325139055|gb|EGC61601.1| ribosomal protein S13p/S18e [Neisseria meningitidis ES14902] gi|325141178|gb|EGC63678.1| ribosomal protein S13p/S18e [Neisseria meningitidis CU385] gi|325143255|gb|EGC65594.1| ribosomal protein S13p/S18e [Neisseria meningitidis 961-5945] gi|325145362|gb|EGC67639.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240013] gi|325197452|gb|ADY92908.1| ribosomal protein S13p/S18e [Neisseria meningitidis G2136] gi|325199378|gb|ADY94833.1| ribosomal protein S13p/S18e [Neisseria meningitidis H44/76] gi|325203000|gb|ADY98454.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240149] gi|325203285|gb|ADY98738.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240355] gi|325205258|gb|ADZ00711.1| ribosomal protein S13p/S18e [Neisseria meningitidis M04-240196] gi|325207202|gb|ADZ02654.1| hypothetical protein NMBNZ0533_0169 [Neisseria meningitidis NZ-05/33] Length = 120 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P+ + L E+++ +R + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|152989995|ref|YP_001355717.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2] gi|158706256|sp|A6Q1K1|RS13_NITSB RecName: Full=30S ribosomal protein S13 gi|151421856|dbj|BAF69360.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2] Length = 120 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 71/120 (59%), Positives = 91/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL Y++GIG +S+ I + + I ++RV++L E EV I + I Sbjct: 1 MARIAGVDLPKNKRIEYALPYVYGIGLTTSRKILDAVGISYDKRVYELTEDEVAAINKHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEGDLRR VAM+IK LMD+GCYRGLRHRRGLPVRGQRT TNARTRK K A+ Sbjct: 61 RENYMVEGDLRRKVAMDIKALMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGKKKTVGAK 120 >gi|161897604|ref|YP_948629.2| 30S ribosomal protein S13 [Arthrobacter aurescens TC1] gi|158706372|sp|A1R8R7|RS13_ARTAT RecName: Full=30S ribosomal protein S13 Length = 125 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L ++E++Q+R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|34499618|ref|NP_903833.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472] gi|81654192|sp|Q7NQH4|RS13_CHRVO RecName: Full=30S ribosomal protein S13 gi|34105469|gb|AAQ61824.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472] Length = 120 Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP V L I G+G +Q IC ++ P +V L E+E+ +R + Sbjct: 1 MARIAGVNIPNHAHAVIGLQAIFGVGQTRAQQICAAASVNPSTKVKDLTEAEMEALRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-FTVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|291521875|emb|CBK80168.1| 30S ribosomal protein S13 [Coprococcus catus GD/7] Length = 123 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 64/123 (52%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y++GIG +S + + + P+ RV L + EV +IR AI Sbjct: 1 MARISGVDLPRDKRIEIGLTYVYGIGRATSNRLLKEAGVNPDTRVRDLTDEEVGKIRDAI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + D +EGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK K Sbjct: 61 DADSILIEGDLRREIAINIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|288919687|ref|ZP_06414014.1| ribosomal protein S13 [Frankia sp. EUN1f] gi|288348876|gb|EFC83126.1| ribosomal protein S13 [Frankia sp. EUN1f] Length = 126 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S++ + P+ RV L + EV ++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSKETLAATGVNPDTRVRDLTDEEVQKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|302553567|ref|ZP_07305909.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM 40736] gi|302471185|gb|EFL34278.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM 40736] Length = 126 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPRDKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|308272956|emb|CBX29560.1| 30S ribosomal protein S13 [uncultured Desulfobacterium sp.] Length = 127 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 69/116 (59%), Positives = 88/116 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KRV L YI+GIG S+ I +KL I P+ +V QL E+E+ IRQ I Sbjct: 1 MARISGVDLPKHKRVEIGLTYIYGIGRSMSKSILSKLNINPDTKVDQLSETEINSIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +Y+VEG+LR ++MNIKRLMDLGCYRGLRHR+ LPVRGQRT TN+RTRK + Sbjct: 61 NTEYKVEGELRTDISMNIKRLMDLGCYRGLRHRKSLPVRGQRTKTNSRTRKGPKRS 116 >gi|300690183|ref|YP_003751178.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07] gi|299077243|emb|CBJ49869.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I+G+G +Q IC +P ++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHAVIGLTAIYGVGRSRAQKICEATGVPTNKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K G+A Sbjct: 61 -NRFTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGIAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|162456222|ref|YP_001618589.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56'] gi|189044298|sp|A9FGC9|RS13_SORC5 RecName: Full=30S ribosomal protein S13 gi|161166804|emb|CAN98109.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56'] Length = 126 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 74/121 (61%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K V AL Y+ GIG + IC K IP +RV +L ++EV IR + Sbjct: 1 MARIAGVDLPRRKHVAYALPYLFGIGRTLALQICEKTNIPQNKRVEELSDAEVKAIRDLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP GQRTHTNARTRK KG + R Sbjct: 61 DAEYKVEGDLRREVQLNIKRLMDLGCYRGLRHRRGLPANGQRTHTNARTRKGPRKGMLQR 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|57242512|ref|ZP_00370450.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195] gi|315639082|ref|ZP_07894250.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21] gi|57016797|gb|EAL53580.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195] gi|315480858|gb|EFU71494.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|86158345|ref|YP_465130.1| 30S ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-C] gi|197122363|ref|YP_002134314.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. K] gi|123497979|sp|Q2IJ63|RS13_ANADE RecName: Full=30S ribosomal protein S13 gi|226712688|sp|B4UBC3|RS13_ANASK RecName: Full=30S ribosomal protein S13 gi|85774856|gb|ABC81693.1| SSU ribosomal protein S13P [Anaeromyxobacter dehalogenans 2CP-C] gi|196172212|gb|ACG73185.1| ribosomal protein S13 [Anaeromyxobacter sp. K] Length = 128 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 72/118 (61%), Positives = 91/118 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ +L YI+GIG S++ I + + P R L + EV +IR+ I Sbjct: 1 MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK KG V Sbjct: 61 EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118 >gi|328884452|emb|CCA57691.1| SSU ribosomal protein S13p [Streptomyces venezuelae ATCC 10712] Length = 126 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRVV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVVVALTYVFGIGRTRSEEILAATGVNPSTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + Q EGDLRR +A +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DANLQTEGDLRREIAADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|255067436|ref|ZP_05319291.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256] gi|261380581|ref|ZP_05985154.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703] gi|319639571|ref|ZP_07994318.1| 30S ribosomal protein S13 [Neisseria mucosa C102] gi|255048231|gb|EET43695.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256] gi|284796549|gb|EFC51896.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703] gi|317399142|gb|EFV79816.1| 30S ribosomal protein S13 [Neisseria mucosa C102] Length = 120 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|94968279|ref|YP_590327.1| 30S ribosomal protein S13 [Candidatus Koribacter versatilis Ellin345] gi|158706207|sp|Q1IS97|RS13_ACIBL RecName: Full=30S ribosomal protein S13 gi|94550329|gb|ABF40253.1| SSU ribosomal protein S13P [Candidatus Koribacter versatilis Ellin345] Length = 127 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + AL YI GIG ++ I + + R+V L E EV +IR AI Sbjct: 1 MARIAGVDLPRNKYINIALTYIFGIGNSRAKAILAEANVEANRKVSDLNEEEVNRIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E VEGDLR+ V+M+IKRL+++G YRG RHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 ENGSSVEGDLRKDVSMHIKRLIEIGSYRGYRHRRSLPVRGQRTHTNARTRKGPRKGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|126654304|ref|ZP_01726074.1| 30S ribosomal protein S13 [Bacillus sp. B14905] gi|169830007|ref|YP_001700165.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41] gi|299541956|ref|ZP_07052279.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1] gi|226712758|sp|B1HMV7|RS13_LYSSC RecName: Full=30S ribosomal protein S13 gi|126589233|gb|EAZ83396.1| 30S ribosomal protein S13 [Bacillus sp. B14905] gi|168994495|gb|ACA42035.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41] gi|298725694|gb|EFI66335.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + I + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKTTAQKVLADAGISEDTRVRDLTEDELNKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y++EGDLRR ++NIKRLM++G +RG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DS-YKLEGDLRRETSLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|41410328|ref|NP_963164.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254776833|ref|ZP_05218349.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. avium ATCC 25291] gi|81412936|sp|Q73S46|RS13_MYCPA RecName: Full=30S ribosomal protein S13 gi|158706370|sp|A0QKU8|RS13_MYCA1 RecName: Full=30S ribosomal protein S13 gi|41399162|gb|AAS06780.1| RpsM [Mycobacterium avium subsp. paratuberculosis K-10] Length = 124 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|329118618|ref|ZP_08247322.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200] gi|327465353|gb|EGF11634.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200] Length = 120 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P +V L ES++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGNSRAKLICEMTGIIPSTKVKDLDESQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|311029075|ref|ZP_07707165.1| 30S ribosomal protein S13 [Bacillus sp. m3-13] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV +L Y+ GIG +++ + + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDVPRDKRVVISLTYVFGIGRSTAEKVLAEAGVSEDTRVRDLTEEELGKIRDVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 61 DK-IKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|225024810|ref|ZP_03714002.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC 23834] gi|224942413|gb|EEG23622.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC 23834] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP VV L I+GIG ++ ICN AI P+ +V L E ++ +R+ + Sbjct: 1 MARVAGVNIPNNAHVVIGLQAIYGIGASRAKLICNNAAIAPDTKVKDLTEGQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q Y+VEGDLRR + MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AQ-YEVEGDLRREITMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|322436521|ref|YP_004218733.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9] gi|321164248|gb|ADW69953.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9] Length = 126 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V L YI+GIG + I I P +V L E ++ IRQ I Sbjct: 1 MARIAGVDVPNNKQVRIGLTYIYGIGDSRAAKILTAADIDPIAKVGTLDEDQLNAIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EKQGMIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|299138170|ref|ZP_07031350.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8] gi|298600100|gb|EFI56258.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8] Length = 126 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+ AL YI+GIG + I I P ++ L E ++ IRQ I Sbjct: 1 MARIAGVDLPGNKQARIALTYIYGIGDPRALRILTAAGIDPLAKMGTLDEDQLNAIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EKEGGIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|192360555|ref|YP_001981230.1| 30S ribosomal protein S13 [Cellvibrio japonicus Ueda107] gi|226712710|sp|B3PK59|RS13_CELJU RecName: Full=30S ribosomal protein S13 gi|190686720|gb|ACE84398.1| ribosomal protein S13p/S18e [Cellvibrio japonicus Ueda107] Length = 118 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG +++ IC I + ++ L E ++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYVYGIGRTTAKQICAATGIAEDTKIGTLSEEQMDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-HTVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|323490647|ref|ZP_08095852.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2] gi|323395739|gb|EGA88580.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2] Length = 121 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI G+G ++Q + + I E RV L E E+ IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGVGKTTAQKVLSAAGISEETRVRDLTEDELNNIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y++EGDLRR V+MNIKRLM++ +RG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DQ-YKIEGDLRREVSMNIKRLMEIASFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|203284410|ref|YP_002222150.1| 30S ribosomal protein S13 [Borrelia duttonii Ly] gi|203287944|ref|YP_002222959.1| 30S ribosomal protein S13 [Borrelia recurrentis A1] gi|226712699|sp|B5RM58|RS13_BORDL RecName: Full=30S ribosomal protein S13 gi|226712702|sp|B5RPK4|RS13_BORRA RecName: Full=30S ribosomal protein S13 gi|201083853|gb|ACH93444.1| 30S ribosomal protein S13 [Borrelia duttonii Ly] gi|201085164|gb|ACH94738.1| 30S ribosomal protein S13 [Borrelia recurrentis A1] Length = 125 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K I PE+R L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRSRALEICKKTGILPEKRAKDLDNEEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|90417745|ref|ZP_01225657.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1] gi|90337417|gb|EAS51068.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1] Length = 122 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 82/122 (67%), Positives = 97/122 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG ++DI K+ + ERRV+ L ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAAHAKDIVKKVNLGDERRVNDLTDAEVLQIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY+VEGDLRR AMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYRVEGDLRRETAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|258406162|ref|YP_003198904.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692] gi|257798389|gb|ACV69326.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692] Length = 123 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR AL YI+GIG ++ I + + + ++ L EV IR + Sbjct: 1 MARIAGVDLPRNKRADIALTYIYGIGRTTALAILDSVGVDWTKKTDALSNDEVNSIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y+VEGDLRR V NIKRLMD+GCYRGLRHRR LP RGQRT TNARTRK + + + Sbjct: 61 EKTYKVEGDLRREVRANIKRLMDIGCYRGLRHRRSLPARGQRTGTNARTRKGPRRAVMGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|108804950|ref|YP_644887.1| 30S ribosomal protein S13 [Rubrobacter xylanophilus DSM 9941] gi|123177177|sp|Q1AU53|RS13_RUBXD RecName: Full=30S ribosomal protein S13 gi|108766193|gb|ABG05075.1| SSU ribosomal protein S13P [Rubrobacter xylanophilus DSM 9941] Length = 122 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG +++ + + + P+ RV L E E+ +R+ I Sbjct: 1 MARIAGVDLPREKRIEVALTYIYGIGRSTARRVIRETGVDPDTRVRDLAEGEIAALRRYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDL+R V NI+RLMD+GCYRGLRHRRGLPVRGQRT TNAR RK R Sbjct: 61 DENLKVEGDLKREVNQNIRRLMDIGCYRGLRHRRGLPVRGQRTKTNARQRKGPRPAIGGR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15896358|ref|NP_349707.1| 30S ribosomal protein S13 [Clostridium acetobutylicum ATCC 824] gi|32363381|sp|Q97EK3|RS13_CLOAB RecName: Full=30S ribosomal protein S13 gi|15026173|gb|AAK81047.1|AE007807_5 Ribosomal protein S13 [Clostridium acetobutylicum ATCC 824] Length = 123 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 66/113 (58%), Positives = 86/113 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG SS+ I ++ PE RV L E EV +R I Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK Sbjct: 61 NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 113 >gi|167749413|ref|ZP_02421540.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702] gi|167657585|gb|EDS01715.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702] gi|291532115|emb|CBK97700.1| SSU ribosomal protein S13P [Eubacterium siraeum 70/3] gi|291558145|emb|CBL35262.1| SSU ribosomal protein S13P [Eubacterium siraeum V10Sc8a] Length = 123 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L Y++GIG K++ DI K + P+ RV L + + +IR AI Sbjct: 1 MARIAGIDLPKEKRVEIGLTYVYGIGRKTANDILAKAGVNPDTRVKDLTDDDEAKIRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 EQ VEGDLRR VA+NIKRL+++ C+RG RHR+GLPVRGQRT TNARTRK K Sbjct: 61 EQLGVAVEGDLRREVALNIKRLVEINCFRGTRHRKGLPVRGQRTKTNARTRKGPKKTIAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|15612723|ref|NP_241026.1| 30S ribosomal protein S13 [Bacillus halodurans C-125] gi|6094152|sp|O50632|RS13_BACHD RecName: Full=30S ribosomal protein S13 gi|2760183|dbj|BAA24192.1| ribosomal protein S13 [Bacillus halodurans] gi|4512429|dbj|BAA75296.1| rpsM homologue (identity of 84% to B. subtilis ) [Bacillus halodurans] gi|10172772|dbj|BAB03879.1| 30S ribosomal protein S13 [Bacillus halodurans C-125] Length = 121 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+G+G ++Q+I K + RV L E E+ +IR A+ Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGVGRSTAQEILAKANVSENTRVRDLTEEELGRIRSAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ ++VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T N+RTRK + + Sbjct: 61 EE-FKVEGDLRREVSLNIKRLIEIGAYRGIRHRRGLPVRGQNTKNNSRTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|329938207|ref|ZP_08287658.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045] gi|329302696|gb|EGG46586.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045] Length = 126 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|239929489|ref|ZP_04686442.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] gi|291437814|ref|ZP_06577204.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] gi|291340709|gb|EFE67665.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ + P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226939209|ref|YP_002794280.1| RpsM [Laribacter hongkongensis HLHK9] gi|254811151|sp|C1DAU0|RS13_LARHH RecName: Full=30S ribosomal protein S13 gi|226714133|gb|ACO73271.1| RpsM [Laribacter hongkongensis HLHK9] Length = 120 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + + L I+GIG ++ IC+ I +V L ++E+ ++R I Sbjct: 1 MARIAGVNIPNHQHIWVGLQAIYGIGATRAKVICSAAGIEISTKVKDLTDAEMEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EGDLRR V MNIKRLMDLGCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-FTIEGDLRREVTMNIKRLMDLGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKPIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|73661996|ref|YP_300777.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82581616|sp|Q49ZE4|RS13_STAS1 RecName: Full=30S ribosomal protein S13 gi|72494511|dbj|BAE17832.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 121 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + PE RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTTTANKIAEEANVSPETRVKDLTDDELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 D-NYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|296454846|ref|YP_003661990.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301] gi|296184278|gb|ADH01160.1| ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301] Length = 125 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR+ AL YI G+G +++ I P+ RV L + ++I +R + Sbjct: 1 MARLAGVDIPNEKRIEIALTYIFGVGRTRTKETLAATGISPDIRVKDLTDEQLITLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|332107890|gb|EGJ09114.1| 30S ribosomal protein S13 [Rubrivivax benzoatilyticus JA2] Length = 121 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++Q IC+ + IP ++V L +SE+ +IR+ I Sbjct: 1 MARIAGINIPPHKHAEIGLTSIYGIGRTTAQKICDSVGIPYSKKVKDLNDSELEKIREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK KG A Sbjct: 61 GR-LTIEGDLRRELSINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|239905881|ref|YP_002952620.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1] gi|259494674|sp|C4XLK0|RS13_DESMR RecName: Full=30S ribosomal protein S13 gi|239795745|dbj|BAH74734.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1] Length = 123 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI GIG ++ I + + L E IR+ + Sbjct: 1 MARIAGVDLPKNKRMDIALTYIFGIGRTTALRILESTGVDWTKNSDALTSEETNNIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR + IKRLMD+GCYRGLRHRRGLP RGQRTHTN+RTRK +G +A+ Sbjct: 61 EANYKVEGDLRREITAGIKRLMDIGCYRGLRHRRGLPCRGQRTHTNSRTRKGPRRGVMAK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302558969|ref|ZP_07311311.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000] gi|302476587|gb|EFL39680.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000] Length = 126 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG SQ I P RV L E +++ IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGIDPNTRVRDLSEEQLVAIREFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|220935470|ref|YP_002514369.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7] gi|254811174|sp|B8GV36|RS13_THISH RecName: Full=30S ribosomal protein S13 gi|219996780|gb|ACL73382.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7] Length = 118 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 70/117 (59%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP K V AL I+GIG +Q IC + P+ ++ L E EV ++R A+ Sbjct: 1 MARVAGVNIPDNKHTVIALTAIYGIGRTRAQKICEATGVKPDMKIRDLTEEEVEKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Q + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK + Sbjct: 61 GQ-FPVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRRPI 116 >gi|297159622|gb|ADI09334.1| 30S ribosomal protein S13 [Streptomyces bingchenggensis BCW-1] Length = 126 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPRDKRVEVALTYVFGIGRTLAQQTLATTGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|240167780|ref|ZP_04746439.1| 30S ribosomal protein S13 [Mycobacterium kansasii ATCC 12478] Length = 124 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIYGIGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + ++EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296168682|ref|ZP_06850431.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896591|gb|EFG76232.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 124 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S +I I + R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDKDLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|226942800|ref|YP_002797873.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ] gi|259494667|sp|C1DKN5|RS13_AZOVD RecName: Full=30S ribosomal protein S13 gi|226717727|gb|ACO76898.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ] Length = 118 Score = 173 bits (441), Expect = 5e-42, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQAICAATGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-LTTEGDLRREVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|90020628|ref|YP_526455.1| 30S ribosomal protein S13 [Saccharophagus degradans 2-40] gi|122996430|sp|Q21M36|RS13_SACD2 RecName: Full=30S ribosomal protein S13 gi|89950228|gb|ABD80243.1| SSU ribosomal protein S13P [Saccharophagus degradans 2-40] Length = 118 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG ++ IC+ + ++ L E +V IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVYGIGRTKAKQICSAAGVAESTKIGDLSEEQVDTIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK K Sbjct: 61 AK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRNLPVRGQRSKTNARTRKGPRKPI 116 >gi|157690925|ref|YP_001485387.1| 30S ribosomal protein S13 [Bacillus pumilus SAFR-032] gi|194017484|ref|ZP_03056095.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061] gi|166991599|sp|A8F9B0|RS13_BACP2 RecName: Full=30S ribosomal protein S13 gi|157679683|gb|ABV60827.1| ribosomal protein S13 [Bacillus pumilus SAFR-032] gi|194010756|gb|EDW20327.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061] Length = 121 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|313891541|ref|ZP_07825151.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E] gi|329121853|ref|ZP_08250468.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965] gi|313120000|gb|EFR43182.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E] gi|327467791|gb|EGF13283.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965] Length = 125 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S+ I + + P+ RV L E +V +IR A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTLSKKILAETGVSPDTRVRDLNEDDVAKIRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK K A+ Sbjct: 61 GE-YKVEGDLRREESLNIKRLVEIGSYRGRRHRLGLPTRGQRTKTNARTRKGPRKTIAAK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|56961957|ref|YP_173679.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16] gi|81367460|sp|Q5WLN7|RS13_BACSK RecName: Full=30S ribosomal protein S13 gi|56908191|dbj|BAD62718.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16] Length = 121 Score = 173 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L Y+ GIG ++ I + RV L E E+ +IR+A+ Sbjct: 1 MARVAGVDIPRDKRVVISLTYVFGIGKSTAAKILETAGVDENTRVRDLTEEELGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E YQVEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 E-GYQVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPKRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|317126887|ref|YP_004093169.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522] gi|315471835|gb|ADU28438.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522] Length = 121 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 92/122 (75%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG S++ I ++ + E RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYVYGIGTSSAKAILSEAGVSEETRVRDLTEDELGKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T NARTRK + + Sbjct: 61 DK-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116671488|ref|YP_832421.1| 30S ribosomal protein S13 [Arthrobacter sp. FB24] gi|158706333|sp|A0JZ51|RS13_ARTS2 RecName: Full=30S ribosomal protein S13 gi|116611597|gb|ABK04321.1| SSU ribosomal protein S13P [Arthrobacter sp. FB24] Length = 125 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L +++++++R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153952886|ref|YP_001393651.1| RpsM [Clostridium kluyveri DSM 555] gi|219853551|ref|YP_002470673.1| hypothetical protein CKR_0208 [Clostridium kluyveri NBRC 12016] gi|189040497|sp|A5N4S2|RS13_CLOK5 RecName: Full=30S ribosomal protein S13 gi|254811142|sp|B9DYD4|RS13_CLOK1 RecName: Full=30S ribosomal protein S13 gi|146345767|gb|EDK32303.1| RpsM [Clostridium kluyveri DSM 555] gi|219567275|dbj|BAH05259.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 123 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KRV L YI+GIG +SQ I + + + RV L E EV +R I Sbjct: 1 MARIAGIDLPKEKRVEIGLTYIYGIGLPTSQKILKETGVNSDTRVKDLTEEEVNLLRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++EGDLRR VA+NIKRL+++G YRG+RHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 -KNLKIEGDLRREVALNIKRLIEIGSYRGIRHRKGLPVRGQKTKTNARTRKGPKKLVGAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|255020789|ref|ZP_05292847.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC 51756] gi|254969785|gb|EET27289.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC 51756] Length = 118 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 69/118 (58%), Positives = 83/118 (70%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K++ AL YI+GIG S+ I +P + RV + E+E+ +IR + Sbjct: 1 MARIAGVNIPNNKQIETALTYIYGIGPSRSKQILAAAEVPFDIRVKDISEAELERIRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK K Sbjct: 61 GK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKAIT 117 >gi|326799152|ref|YP_004316971.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21] gi|326549916|gb|ADZ78301.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21] Length = 125 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR V L YI+GIG +++ I + I + +V + + ++ IR I Sbjct: 1 MARIAGIDLPRNKRGVIGLTYIYGIGPSTAKSILAEAGIDEDTKVQEWTDDQLTAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +VEG LR V +NIKRLMD+GCYRGLRHR+GLP+RGQRT N+RTRK K + Sbjct: 61 NDRVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|78357277|ref|YP_388726.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|91207701|sp|Q30Z65|RS13_DESDG RecName: Full=30S ribosomal protein S13 gi|78219682|gb|ABB39031.1| SSU ribosomal protein S13P [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 122 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL YI+G+G ++ +I + + R + L EV +IR+ I Sbjct: 1 MARIAGVDLPRGKRVDIALTYIYGVGRATALEILDTTGVDWTRNIDDLSADEVNEIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ+++VEGDLRR ++ NIKRLMD+GC+RGLRHRRGLP RGQRT TNARTRK +G + Sbjct: 61 EQNHKVEGDLRREISSNIKRLMDIGCHRGLRHRRGLPARGQRTKTNARTRKGPRRGVAGK 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|254819218|ref|ZP_05224219.1| 30S ribosomal protein S13 [Mycobacterium intracellulare ATCC 13950] Length = 124 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G S +I I R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILEATGIDKNLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|77461279|ref|YP_350786.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1] gi|91207719|sp|Q3K609|RS13_PSEPF RecName: Full=30S ribosomal protein S13 gi|77385282|gb|ABA76795.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1] gi|310941781|dbj|BAJ24244.1| 30S ribosomal protein S13 [Pseudomonas chlororaphis subsp. chlororaphis] Length = 118 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAETGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|269958605|ref|YP_003328392.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel] gi|269848434|gb|ACZ49078.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel] Length = 123 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I + V L + +V++IR I Sbjct: 1 MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICKGCGISEDALVSSLGDEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|94987421|ref|YP_595354.1| 30S ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00] gi|158706242|sp|Q1MPP4|RS13_LAWIP RecName: Full=30S ribosomal protein S13 gi|94731670|emb|CAJ55033.1| ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00] Length = 122 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 91/122 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR AL YI+G+G ++ + + + I R + L E+ ++R+ + Sbjct: 1 MARIAGIDLPRGKRSDIALSYIYGVGRVTALKVLDAVGINWSRSIDDLSAEELNEVRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEG+LRR V+ NIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK KG V + Sbjct: 61 EKNYKVEGELRREVSANIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKGAVGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|239825718|ref|YP_002948342.1| 30S ribosomal protein S13 [Geobacillus sp. WCH70] gi|259494681|sp|C5D3U2|RS13_GEOSW RecName: Full=30S ribosomal protein S13 gi|239806011|gb|ACS23076.1| ribosomal protein S13 [Geobacillus sp. WCH70] Length = 121 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRL+++GCYRG+RHRRGLPVRGQ T NARTRK + + Sbjct: 61 GR-LKVEGDLRREVSLNIKRLIEIGCYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8] gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1] gi|170289158|ref|YP_001739396.1| ribosomal protein S13 [Thermotoga sp. RQ2] gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10] gi|6831659|sp|Q9X1I5|RS13_THEMA RecName: Full=30S ribosomal protein S13 gi|166231929|sp|A5IMA8|RS13_THEP1 RecName: Full=30S ribosomal protein S13 gi|226712798|sp|B1LBL5|RS13_THESQ RecName: Full=30S ribosomal protein S13 gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8] gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1] gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2] gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10] Length = 125 Score = 173 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+V AL YI+GIG S +I I PE+RV L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++VEG+LR V NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK + Sbjct: 61 QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRKGPRPSRIKT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|302543336|ref|ZP_07295678.1| 30S ribosomal protein S13 [Streptomyces hygroscopicus ATCC 53653] gi|302460954|gb|EFL24047.1| 30S ribosomal protein S13 [Streptomyces himastatinicus ATCC 53653] Length = 126 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|308190156|ref|YP_003923087.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER] gi|319777460|ref|YP_004137111.1| 30S ribosomal protein s13 [Mycoplasma fermentans M64] gi|238810273|dbj|BAH70063.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624898|gb|ADN69203.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER] gi|318038535|gb|ADV34734.1| 30S ribosomal protein S13 [Mycoplasma fermentans M64] Length = 123 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG +Q+IC K I RV L E ++ IR+ + Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGRTRAQEICAKAKIDENLRVKDLSEEQLSAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y EGDLRR ++NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKEYTTEGDLRRETSLNIKRLMEIKCYRGIRHRKGLPVRGQCTQKNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|220913402|ref|YP_002488711.1| 30S ribosomal protein S13 [Arthrobacter chlorophenolicus A6] gi|325964134|ref|YP_004242040.1| 30S ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3] gi|254811125|sp|B8HCX6|RS13_ARTCA RecName: Full=30S ribosomal protein S13 gi|219860280|gb|ACL40622.1| ribosomal protein S13 [Arthrobacter chlorophenolicus A6] gi|323470221|gb|ADX73906.1| SSU ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3] Length = 124 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KR+ AL YI+G+G + + I + RV L +++++++R I Sbjct: 1 MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218779739|ref|YP_002431057.1| 30S ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01] gi|226712729|sp|B8FER2|RS13_DESAA RecName: Full=30S ribosomal protein S13 gi|218761123|gb|ACL03589.1| ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01] Length = 127 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 67/115 (58%), Positives = 83/115 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI GIG +S I +L I P+ + L E +V IR+ I Sbjct: 1 MARIAGVDLPKRKRIEIGLTYIFGIGRSTSSKILEELGIDPDTKTDDLTEGQVNDIRKLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y+VEG+LR ++MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK + Sbjct: 61 DSKYRVEGELRTQISMNIKRLMDLGCYRGLRHRRGLPVHGQRTSTNARTRKGPRR 115 >gi|325280944|ref|YP_004253486.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712] gi|324312753|gb|ADY33306.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712] Length = 125 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 59/112 (52%), Positives = 79/112 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR AL YI+GIG S++ I ++ I + +V + ++ +R+ I Sbjct: 1 MARIVGVDLPSNKRGEIALTYIYGIGRSSARAILSEAGIDYDLKVKDWNDDQLGAVRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y+VEG+LR +V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 GTEYKVEGELRSSVQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKG 112 >gi|300812373|ref|ZP_07092808.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496678|gb|EFK31765.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 116 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115 >gi|327438301|dbj|BAK14666.1| ribosomal protein S13 [Solibacillus silvestris StLB046] Length = 121 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +SQ + I RV L E ++ QIR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKTTSQKVLAGAGIDENTRVKDLTEDQLNQIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+ EGDLRR V++NIKRLM++ RG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DS-YKTEGDLRREVSLNIKRLMEIASNRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|322812562|pdb|3PYN|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812615|pdb|3PYQ|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From The Psiv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|322812668|pdb|3PYS|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|322812721|pdb|3PYU|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv Igr Ires Rna Bound To The 70s Ribosome. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 116 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 70/116 (60%), Positives = 85/116 (73%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV IPR KRV AL YI+GIG +++ K I P RV L E+EV+++R+ +E Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +++EG+LR VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTV 116 >gi|308178108|ref|YP_003917514.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117] gi|307745571|emb|CBT76543.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117] Length = 124 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV+ AL YI+G+G +++ I P+ RV L + +++Q+R + Sbjct: 1 MARLAGVDIPREKRVIIALTYIYGVGKTRAEETIAATGISPDIRVKDLTDEQLVQLRDFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR V +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGTYKVEGDLRREVQADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257095018|ref|YP_003168659.1| 30S ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047542|gb|ACV36730.1| ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 120 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + AL I+GIG +Q IC+ + ++ L E+E+ ++R I Sbjct: 1 MARIAGVNLPNHQHAEIALTAIYGIGRPRAQKICDAAGVTRSTKMKDLTEAELERLRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK K + Sbjct: 61 GK-LSVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPSRGQRTRTNARTRKGPRKPIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|23097598|ref|NP_691064.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831] gi|32363325|sp|Q8ETW0|RS13_OCEIH RecName: Full=30S ribosomal protein S13 gi|22775821|dbj|BAC12099.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831] Length = 121 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+G+G ++Q I + + + RV L E E+ +IRQA+ Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGVGKTTAQQILKEAGVSEDTRVRDLTEDELGRIRQAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y EGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T N+RTRK K + Sbjct: 61 DQ-YNTEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNSRTRKGPRKTMANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|254391368|ref|ZP_05006571.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|294814492|ref|ZP_06773135.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|326442881|ref|ZP_08217615.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|197705058|gb|EDY50870.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] gi|294327091|gb|EFG08734.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064] Length = 126 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG +Q+ + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTLAQETLAATGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|145596409|ref|YP_001160706.1| 30S ribosomal protein S13 [Salinispora tropica CNB-440] gi|189044293|sp|A4XBM1|RS13_SALTO RecName: Full=30S ribosomal protein S13 gi|145305746|gb|ABP56328.1| SSU ribosomal protein S13P [Salinispora tropica CNB-440] Length = 126 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK + + Sbjct: 61 ETNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|158520747|ref|YP_001528617.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3] gi|226712731|sp|A8ZV79|RS13_DESOH RecName: Full=30S ribosomal protein S13 gi|158509573|gb|ABW66540.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3] Length = 127 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 68/116 (58%), Positives = 87/116 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I NKL+I + +V QL E+E+ IR A+ Sbjct: 1 MARIAGVDLPKRKRVEIGLTYIYGIGRSTSRQILNKLSIDYDTKVDQLTETEINAIRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +++VEG+LR V+MNIKRLMDLGCYRGLRHR+ LP GQRT TNARTRK + Sbjct: 61 TNEHKVEGELRTEVSMNIKRLMDLGCYRGLRHRKSLPCHGQRTSTNARTRKGPKRT 116 >gi|242278681|ref|YP_002990810.1| 30S ribosomal protein S13 [Desulfovibrio salexigens DSM 2638] gi|259494672|sp|C6C1A8|RS13_DESAD RecName: Full=30S ribosomal protein S13 gi|242121575|gb|ACS79271.1| ribosomal protein S13 [Desulfovibrio salexigens DSM 2638] Length = 123 Score = 173 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+G+G ++ I + + I + L +V IR+ + Sbjct: 1 MARIAGVDLPKNKRLDIALTYIYGVGRTTALKILDTVGIDWTLKTDDLSGEQVNTIRKEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR +IKRLMD+GCYRGLRHRRGLPVRGQ + TNARTRK + ++R Sbjct: 61 EDNYKVEGDLRRDQIADIKRLMDIGCYRGLRHRRGLPVRGQSSKTNARTRKGPRRSVMSR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|284040597|ref|YP_003390527.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74] gi|283819890|gb|ADB41728.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74] Length = 125 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR AL YI GIG ++ I I +++ + + E +R AI Sbjct: 1 MARIAGVDIPDKKRGEIALTYIFGIGRSRAKKILTDAGISVDKKASEWSDEEASAVRNAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y+VEG LR V ++IKRLMD+GCYRGLRHR+GLPVRGQ T N+RTRK K + Sbjct: 61 SNEYKVEGQLRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQHTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|83748172|ref|ZP_00945199.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551] gi|207721874|ref|YP_002252312.1| 30S ribosomal protein S13 [Ralstonia solanacearum MolK2] gi|207744553|ref|YP_002260945.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609] gi|300702803|ref|YP_003744404.1| 30S ribosomal protein S13 [Ralstonia solanacearum CFBP2957] gi|83725140|gb|EAP72291.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551] gi|206587042|emb|CAQ17626.1| 30s ribosomal protein s13 [Ralstonia solanacearum MolK2] gi|206595959|emb|CAQ62886.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609] gi|299070465|emb|CBJ41760.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CFBP2957] Length = 121 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L ++GIG ++ IC +P ++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAVYGIGRSRARKICEVTGVPTNKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK K GVA Sbjct: 61 NK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|222150469|ref|YP_002559622.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402] gi|254811153|sp|B9E9L5|RS13_MACCJ RecName: Full=30S ribosomal protein S13 gi|222119591|dbj|BAH16926.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402] Length = 121 Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG S+Q I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRVVIALTYIYGIGRTSAQKILAEANVSEDTRVRDLTEDELGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V +NIKRLM++ YRG+RHRRGLP RGQ T NARTRK K + Sbjct: 61 D-GYKVEGDLRREVNLNIKRLMEIASYRGIRHRRGLPTRGQNTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|312866513|ref|ZP_07726730.1| 30S ribosomal protein S13 [Streptococcus downei F0415] gi|311097944|gb|EFQ56171.1| 30S ribosomal protein S13 [Streptococcus downei F0415] Length = 121 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP K VV +L YI+GIG +SQ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKHVVISLTYIYGIGLATSQKILAAAGVAEDIRVKDLTTDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 D-NIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|209884835|ref|YP_002288692.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5] gi|209873031|gb|ACI92827.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5] Length = 125 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 84/121 (69%), Positives = 96/121 (79%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRV+ AL YIHGIG K++ DI K+ IP +RRV QL + EV+QIR+ I+ Sbjct: 5 ARIAGVNIPTNKRVIIALQYIHGIGQKNAADIVEKVKIPLDRRVSQLTDQEVLQIREIID 64 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K Sbjct: 65 RDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKK 124 Query: 122 R 122 + Sbjct: 125 K 125 >gi|126736628|ref|ZP_01752368.1| ribosomal protein S13 [Roseobacter sp. CCS2] gi|126713941|gb|EBA10812.1| ribosomal protein S13 [Roseobacter sp. CCS2] Length = 133 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 76/121 (62%), Positives = 89/121 (73%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP AKRV AL YI GIG +++IC + I RRV+QL ++EV+ IR+ I+ Sbjct: 13 ARIAGVNIPTAKRVPIALTYITGIGNAKAEEICEAVKIDRARRVNQLSDAEVLSIREYID 72 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + VEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K +K Sbjct: 73 ANLMVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGKK 132 Query: 122 R 122 + Sbjct: 133 K 133 >gi|289550167|ref|YP_003471071.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis HKU09-01] gi|315659203|ref|ZP_07912067.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590] gi|289179699|gb|ADC86944.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis HKU09-01] gi|315495628|gb|EFU83959.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590] Length = 121 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++Q I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGTSTAQKIVEQANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 DS-FKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|118616622|ref|YP_904954.1| 30S ribosomal protein S13 [Mycobacterium ulcerans Agy99] gi|183981107|ref|YP_001849398.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M] gi|158706253|sp|A0PMB4|RS13_MYCUA RecName: Full=30S ribosomal protein S13 gi|226712767|sp|B2HCX1|RS13_MYCMM RecName: Full=30S ribosomal protein S13 gi|118568732|gb|ABL03483.1| 30S ribosomal protein S13, RpsM [Mycobacterium ulcerans Agy99] gi|183174433|gb|ACC39543.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M] Length = 124 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G S +I I R L + ++ +R I Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + ++EGDLRR V +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|88607193|ref|YP_504913.1| 30S ribosomal protein S13 [Anaplasma phagocytophilum HZ] gi|123495600|sp|Q2GL38|RS13_ANAPZ RecName: Full=30S ribosomal protein S13 gi|88598256|gb|ABD43726.1| ribosomal protein S13 [Anaplasma phagocytophilum HZ] Length = 123 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 72/122 (59%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVN+P KRVV AL YI+GIG + IC I RV L E +V++IR I Sbjct: 1 MARIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDVVKIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK + VA Sbjct: 61 RAGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGSRLAVAA 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|159039808|ref|YP_001539061.1| 30S ribosomal protein S13 [Salinispora arenicola CNS-205] gi|189044292|sp|A8M503|RS13_SALAI RecName: Full=30S ribosomal protein S13 gi|157918643|gb|ABW00071.1| ribosomal protein S13 [Salinispora arenicola CNS-205] Length = 126 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + I P++R L + E++Q+R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRNHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK + + Sbjct: 61 EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|221307954|ref|ZP_03589801.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|221312275|ref|ZP_03594080.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317209|ref|ZP_03598503.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. JH642] gi|221321472|ref|ZP_03602766.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. SMY] gi|255767034|ref|NP_388022.2| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|321313813|ref|YP_004206100.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5] gi|1173195|sp|P20282|RS13_BACSU RecName: Full=30S ribosomal protein S13; AltName: Full=BS14 gi|1044989|gb|AAB06824.1| ribosomal protein S13 [Bacillus subtilis] gi|225184661|emb|CAB11917.2| ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168] gi|291482513|dbj|BAI83588.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. natto BEST195] gi|320020087|gb|ADV95073.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5] Length = 121 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|328955888|ref|YP_004373221.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2] gi|328456212|gb|AEB07406.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2] Length = 124 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG ++ IC I P+ RV L E EV IR I Sbjct: 1 MARINGVDLPREKRVEIGLTYIYGIGRTTATKICVTCNINPDTRVRDLTEDEVNAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLRR N+KRLMD+G YRGLRHRRGLPVRGQRTHTNARTRK + A Sbjct: 61 DKNRIMVEGDLRRDQNQNVKRLMDIGAYRGLRHRRGLPVRGQRTHTNARTRKGPKRQIGA 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|258646027|ref|ZP_05733496.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470] gi|260403399|gb|EEW96946.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470] Length = 125 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG S++I NK I P+ RV L E +V IR A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIFGIGLTLSREILNKAGISPDVRVRDLTEDDVANIRNAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 DY+VEGDLRR ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK K + Sbjct: 61 -ADYKVEGDLRREESLNIKRLVEIGSYRGRRHRDGLPTRGQRTKTNARTRKGPRKTIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|206889222|ref|YP_002249223.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM 11347] gi|226712799|sp|B5YG25|RS13_THEYD RecName: Full=30S ribosomal protein S13 gi|206741160|gb|ACI20217.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM 11347] Length = 121 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ +RV L I GIG S I + + P +RV L + E+++IR I Sbjct: 1 MARIAGVDIPKNERVEIGLTRIFGIGRSLSNKILKETGVEPNKRVKDLTDDEIVKIRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++Y+VEG+LR+ ++MNIKRLMD+GCYRGLRH LPVRGQRT TN+RTRK + + + Sbjct: 61 EKNYKVEGELRKEISMNIKRLMDIGCYRGLRHMANLPVRGQRTRTNSRTRKGPRRKIMKK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|57504896|ref|ZP_00370871.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228] gi|305432397|ref|ZP_07401559.1| 30S ribosomal protein S13 [Campylobacter coli JV20] gi|57019324|gb|EAL56026.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228] gi|304444436|gb|EFM37087.1| 30S ribosomal protein S13 [Campylobacter coli JV20] Length = 121 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|225873053|ref|YP_002754512.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196] gi|254811119|sp|C1F617|RS13_ACIC5 RecName: Full=30S ribosomal protein S13 gi|225793801|gb|ACO33891.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196] Length = 127 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR K+ AL YI+GIG + I + P R++ L E EV +IRQ I Sbjct: 1 MARVAGVDLPRNKQARIALTYIYGIGNPRALRILTAANVDPFRKIQDLSEDEVNRIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + QVEGDLR+ VAM+IKRL+++ YRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 EAEGQVEGDLRKDVAMHIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325684743|gb|EGD26897.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 116 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115 >gi|261378063|ref|ZP_05982636.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685] gi|269145513|gb|EEZ71931.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685] Length = 120 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|295093658|emb|CBK82749.1| 30S ribosomal protein S13 [Coprococcus sp. ART55/1] Length = 122 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SSQ I + + P+ R L + EV ++ + I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR + NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK K + Sbjct: 61 KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218961409|ref|YP_001741184.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas acidaminovorans] gi|167730066|emb|CAO80978.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas acidaminovorans] Length = 122 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA IAG+ +P+ KR+ L YI+GIG S+++IC K I ++V L E +R I Sbjct: 1 MAHIAGIELPKNKRLFIGLTYIYGIGRSSAREICKKANIDEMKKVADLTMEEEKILRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y VEG LR VAMNIKRLM++GCYRGLRH+RGLPVRGQRTHTNARTRK + + Sbjct: 61 HNEYVVEGALRTQVAMNIKRLMEIGCYRGLRHKRGLPVRGQRTHTNARTRKGPRGSTIKK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|257126745|ref|YP_003164859.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b] gi|260891352|ref|ZP_05902615.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254] gi|257050684|gb|ACV39868.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b] gi|260858735|gb|EEX73235.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254] Length = 121 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI GIG +S I I + RV L E +V ++R A+ Sbjct: 1 MARIAGVDIPRNKRVEVSLTYIFGIGRSTSNKILGATGIDRDTRVKDLTEEQVAKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y++EG+LR+ + +NIKRL+D+ YRGLRHR GLPVRGQ+T TNARTRK + +A+ Sbjct: 61 EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVRMAIAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|170780764|ref|YP_001709096.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. sepedonicus] gi|169155332|emb|CAQ00435.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. sepedonicus] Length = 124 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G SS I RV L + ++I +R I Sbjct: 1 MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKNIRVKDLSDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|237653973|ref|YP_002890287.1| 30S ribosomal protein S13 [Thauera sp. MZ1T] gi|237625220|gb|ACR01910.1| ribosomal protein S13 [Thauera sp. MZ1T] Length = 120 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ I ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGIVRSVKIKDLTESDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKPIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|92112576|ref|YP_572504.1| 30S ribosomal protein S13 [Chromohalobacter salexigens DSM 3043] gi|122420779|sp|Q1R0F3|RS13_CHRSD RecName: Full=30S ribosomal protein S13 gi|91795666|gb|ABE57805.1| SSU ribosomal protein S13P [Chromohalobacter salexigens DSM 3043] Length = 118 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI GIG +Q+IC I P +V L EV +R + Sbjct: 1 MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICAATGIAPTAKVQDLSAEEVDTLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR +NIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YTVEGDLRRDTTLNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|222823136|ref|YP_002574709.1| 30S ribosomal protein S13 [Campylobacter lari RM2100] gi|254811136|sp|B9KEH3|RS13_CAMLR RecName: Full=30S ribosomal protein S13 gi|222538357|gb|ACM63458.1| 30S ribosomal protein S13 [Campylobacter lari RM2100] Length = 121 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLHTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|317125843|ref|YP_004099955.1| 30S ribosomal protein S13P [Intrasporangium calvum DSM 43043] gi|315589931|gb|ADU49228.1| SSU ribosomal protein S13P [Intrasporangium calvum DSM 43043] Length = 124 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G S++ + P+ RV L ++E++ +R + Sbjct: 1 MARLVGVDLPRDKRVEVALTYIFGVGRTRSKEALAATGVSPDTRVKDLGDAELVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYRLEGDLRREVQSDIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148273770|ref|YP_001223331.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831700|emb|CAN02669.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 124 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL YI+G+G SS I + RV L + ++I +R I Sbjct: 1 MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKDIRVKDLSDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170723884|ref|YP_001751572.1| 30S ribosomal protein S13 [Pseudomonas putida W619] gi|226712779|sp|B1JAJ0|RS13_PSEPW RecName: Full=30S ribosomal protein S13 gi|169761887|gb|ACA75203.1| ribosomal protein S13 [Pseudomonas putida W619] gi|310941010|dbj|BAJ24379.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941040|dbj|BAJ24394.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|307328055|ref|ZP_07607236.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113] gi|306886360|gb|EFN17365.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113] Length = 126 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KRV AL Y+ GIG +Q + P+ RV L E ++++IR+ + Sbjct: 1 MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLGEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|224023642|ref|ZP_03642008.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM 18228] gi|224016864|gb|EEF74876.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM 18228] Length = 126 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|269796229|ref|YP_003315684.1| 30S ribosomal protein S13P [Sanguibacter keddieii DSM 10542] gi|269098414|gb|ACZ22850.1| SSU ribosomal protein S13P [Sanguibacter keddieii DSM 10542] Length = 124 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G +Q I P+ RV L ++E++ +R + Sbjct: 1 MARLIGVDLPRDKRLEVALTYIFGVGRTRAQQTLAATGISPDVRVKDLGDAELVSLRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|253995741|ref|YP_003047805.1| 30S ribosomal protein S13 [Methylotenera mobilis JLW8] gi|253982420|gb|ACT47278.1| ribosomal protein S13 [Methylotenera mobilis JLW8] Length = 120 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG ++Q IC + ++ L +++V ++R + Sbjct: 1 MARIAGVNIPNNKHTEIALTAIYGIGRNTAQKICVAAGVLATAKIKDLNDADVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YKVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPVKAIKQS 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|310940980|dbj|BAJ24364.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|237806897|ref|YP_002891337.1| 30S ribosomal protein S13 [Tolumonas auensis DSM 9187] gi|259494693|sp|C4L7V2|RS13_TOLAT RecName: Full=30S ribosomal protein S13 gi|237499158|gb|ACQ91751.1| ribosomal protein S13 [Tolumonas auensis DSM 9187] Length = 118 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G ++ IC I + +V L E+++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGDTRAKSICAAAGIAEDVKVKDLDEAQIEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|253998038|ref|YP_003050101.1| 30S ribosomal protein S13 [Methylovorus sp. SIP3-4] gi|253984717|gb|ACT49574.1| ribosomal protein S13 [Methylovorus sp. SIP3-4] Length = 120 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+G+G +++ IC + ++ L ++EV ++R + Sbjct: 1 MARIAGVNIPNHKHTEIALTSIYGVGRNTAKQICLAAGVAGTAKIKDLNDAEVEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK K A Sbjct: 61 AK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRTKTNARTRKGPIKPIKAS 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|70732862|ref|YP_262629.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf-5] gi|330812054|ref|YP_004356516.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|91207717|sp|Q4K554|RS13_PSEF5 RecName: Full=30S ribosomal protein S13 gi|68347161|gb|AAY94767.1| ribosomal protein S13p/S18e [Pseudomonas fluorescens Pf-5] gi|327380162|gb|AEA71512.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 118 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVTGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|57238605|ref|YP_179736.1| 30S ribosomal protein S13 [Campylobacter jejuni RM1221] gi|86152230|ref|ZP_01070441.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596382|ref|ZP_01099619.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 84-25] gi|148925736|ref|ZP_01809424.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8486] gi|153951257|ref|YP_001398872.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. doylei 269.97] gi|157415812|ref|YP_001483068.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81116] gi|205355606|ref|ZP_03222376.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563181|ref|YP_002344961.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|283956976|ref|ZP_06374448.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336] gi|315125000|ref|YP_004067004.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|32363423|sp|Q9PM83|RS13_CAMJE RecName: Full=30S ribosomal protein S13 gi|81353183|sp|Q5HSJ9|RS13_CAMJR RecName: Full=30S ribosomal protein S13 gi|166231908|sp|A7H5U2|RS13_CAMJD RecName: Full=30S ribosomal protein S13 gi|172047191|sp|A8FNQ4|RS13_CAMJ8 RecName: Full=30S ribosomal protein S13 gi|57167409|gb|AAW36188.1| ribosomal protein S13/S18 [Campylobacter jejuni RM1221] gi|85840719|gb|EAQ57970.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 260.94] gi|88191223|gb|EAQ95195.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360888|emb|CAL35689.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845746|gb|EDK22837.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8486] gi|152938703|gb|ABS43444.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. doylei 269.97] gi|157386776|gb|ABV53091.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81116] gi|205346383|gb|EDZ33016.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni CG8421] gi|283791477|gb|EFC30274.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336] gi|284926787|gb|ADC29139.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni IA3902] gi|307748449|gb|ADN91719.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni M1] gi|315018722|gb|ADT66815.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315059043|gb|ADT73372.1| SSU ribosomal protein S13p/S18 [Campylobacter jejuni subsp. jejuni S3] gi|315927662|gb|EFV06993.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929463|gb|EFV08660.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 305] gi|315931271|gb|EFV10241.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 327] Length = 121 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 91/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|310941931|dbj|BAJ24319.1| 30S ribosomal protein S13 [Pseudomonas putida] Length = 118 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAVKIKDLSDEQIEQLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|241763532|ref|ZP_04761584.1| ribosomal protein S13 [Acidovorax delafieldii 2AN] gi|241367263|gb|EER61603.1| ribosomal protein S13 [Acidovorax delafieldii 2AN] Length = 121 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L +S++ +IR+ I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTRARKICEATGIAYSKKIKDLSDSDLEKIREQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|119899683|ref|YP_934896.1| 30S ribosomal protein S13 [Azoarcus sp. BH72] gi|158706334|sp|A1KB04|RS13_AZOSB RecName: Full=30S ribosomal protein S13 gi|119672096|emb|CAL96010.1| 30S ribosomal protein S13 [Azoarcus sp. BH72] Length = 120 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ + ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGVVRSAKIKDLTESDMEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 GR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|298370569|ref|ZP_06981884.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314] gi|298281179|gb|EFI22669.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314] Length = 120 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVNIP VV L I+GIG ++ IC I P +V L E+++ +R+ + Sbjct: 1 MARISGVNIPNNAHVVIGLQAIYGIGTTRAKLICEAAKIAPSIKVKDLDENQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|294669846|ref|ZP_06734905.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308239|gb|EFE49482.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 120 Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I +V L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKLICAATGIEGSTKVKDLDENQLEALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q Y+VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 LQ-YEVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|239943602|ref|ZP_04695539.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] gi|239990055|ref|ZP_04710719.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 11379] gi|291447069|ref|ZP_06586459.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] gi|291350016|gb|EFE76920.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998] Length = 126 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAATGVNPNTRVRDLAEEDLVKIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR V NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|310941751|dbj|BAJ24229.1| 30S ribosomal protein S13 [Pseudomonas azotoformans] gi|310941961|dbj|BAJ24334.1| 30S ribosomal protein S13 [Pseudomonas fluorescens] Length = 118 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVAGVNPAAKIKDLSDEQIELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|121997627|ref|YP_001002414.1| 30S ribosomal protein S13 [Halorhodospira halophila SL1] gi|158706237|sp|A1WVA0|RS13_HALHL RecName: Full=30S ribosomal protein S13 gi|121589032|gb|ABM61612.1| SSU ribosomal protein S13P [Halorhodospira halophila SL1] Length = 119 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K AL I+GIG + ICN +P +RRV L ++EV +RQ + Sbjct: 1 MARIAGINIPTHKHAWVALTSIYGIGRTRALSICNAAGVPHDRRVRDLNDAEVEALRQEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y +EGDLRR+VAM+IKRLMDLGCYRG+RHRRGLPVRGQ+T TNARTRK +G +R Sbjct: 61 G-NYVIEGDLRRSVAMDIKRLMDLGCYRGMRHRRGLPVRGQQTQTNARTRKGPRRGPASR 119 >gi|297192678|ref|ZP_06910076.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC 25486] gi|197721667|gb|EDY65575.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC 25486] Length = 126 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + Q EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLQTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|268680564|ref|YP_003304995.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946] gi|268618595|gb|ACZ12960.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946] Length = 122 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KRV L YI+GIG SS+ I I ++RVH+L E +V IR+ I Sbjct: 1 MARIAGVDLPMKKRVEYGLTYIYGIGLTSSRAILTATGISFDKRVHELSEDDVAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +QVEGDLR+ VAM+IK LMD+G YRGLRHR+GLPVRGQ+T TNARTRK + A+ Sbjct: 61 QAGFQVEGDLRKKVAMDIKALMDMGSYRGLRHRKGLPVRGQKTKTNARTRKGKKRTVGAK 120 Query: 121 KR 122 + Sbjct: 121 AK 122 >gi|82701922|ref|YP_411488.1| 30S ribosomal protein S13 [Nitrosospira multiformis ATCC 25196] gi|91207708|sp|Q2YAX5|RS13_NITMU RecName: Full=30S ribosomal protein S13 gi|82409987|gb|ABB74096.1| SSU ribosomal protein S13P [Nitrosospira multiformis ATCC 25196] Length = 125 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + AL I+GIG +++IC I ++ + ++E+ ++R + Sbjct: 1 MARIAGVNIPNHQHAEIALTAIYGIGRARAREICEAAGINVSTKMKDVTDAEMDKLRDNV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAV 116 >gi|293364084|ref|ZP_06610820.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2] gi|292552574|gb|EFF41348.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2] Length = 122 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 62/121 (51%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRVV +L YI+GIG ++ IC + I RV L E ++ +IR+ + Sbjct: 1 MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKIDENARVKSLSEEQLSKIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKQFTTEGDLRREVTLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|146281192|ref|YP_001171345.1| 30S ribosomal protein S13 [Pseudomonas stutzeri A1501] gi|158706265|sp|A4VHQ2|RS13_PSEU5 RecName: Full=30S ribosomal protein S13 gi|145569397|gb|ABP78503.1| ribosomal protein S13 [Pseudomonas stutzeri A1501] gi|310941901|dbj|BAJ24304.1| 30S ribosomal protein S13 [Pseudomonas stutzeri] gi|327479345|gb|AEA82655.1| 30S ribosomal protein S13 [Pseudomonas stutzeri DSM 4166] Length = 118 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G +Q+IC + P ++ L + +V +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTRAQEICAATGVNPAAKIKDLSDEQVELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FIVEGDLRRDVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|158317767|ref|YP_001510275.1| 30S ribosomal protein S13 [Frankia sp. EAN1pec] gi|226712739|sp|A8LB08|RS13_FRASN RecName: Full=30S ribosomal protein S13 gi|158113172|gb|ABW15369.1| ribosomal protein S13 [Frankia sp. EAN1pec] Length = 126 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S+D + P+ RV L + EV ++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATGVNPDTRVRDLTDDEVQKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|154684659|ref|YP_001419820.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens FZB42] gi|296333138|ref|ZP_06875592.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672841|ref|YP_003864512.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str. W23] gi|308172032|ref|YP_003918737.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7] gi|166231898|sp|A7Z0R3|RS13_BACA2 RecName: Full=30S ribosomal protein S13 gi|154350510|gb|ABS72589.1| RpsM [Bacillus amyloliquefaciens FZB42] gi|296149754|gb|EFG90649.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411084|gb|ADM36202.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str. W23] gi|307604896|emb|CBI41267.1| ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7] gi|328551842|gb|AEB22334.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens TA208] gi|328910099|gb|AEB61695.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens LL3] Length = 121 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|215432431|ref|ZP_03430350.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] gi|289755593|ref|ZP_06514971.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] gi|289696180|gb|EFD63609.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054] Length = 124 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E D +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK + + Sbjct: 61 EADLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|146308901|ref|YP_001189366.1| 30S ribosomal protein S13 [Pseudomonas mendocina ymp] gi|330505185|ref|YP_004382054.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01] gi|166231916|sp|A4XZ68|RS13_PSEMY RecName: Full=30S ribosomal protein S13 gi|145577102|gb|ABP86634.1| SSU ribosomal protein S13P [Pseudomonas mendocina ymp] gi|310941841|dbj|BAJ24274.1| 30S ribosomal protein S13 [Pseudomonas mendocina] gi|328919471|gb|AEB60302.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01] Length = 118 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAATGVNPAAKIKDLTDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|313888778|ref|ZP_07822439.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845147|gb|EFR32547.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 120 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG SQ+I + + RV L E+E+ +IR+ I Sbjct: 1 MARISGVDLPREKRVEIGLTYIYGIGKPRSQEILTAAGVDFDTRVKDLTEAELAKIREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK K Sbjct: 61 DK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKMGLPVRGQKTKTNARTRKGPKKLVSKG 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|295838429|ref|ZP_06825362.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74] gi|302519634|ref|ZP_07271976.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78] gi|318058103|ref|ZP_07976826.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actG] gi|318076044|ref|ZP_07983376.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actF] gi|197695773|gb|EDY42706.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74] gi|302428529|gb|EFL00345.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78] Length = 126 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL Y+ GIG S+ + P RV L E ++++IR+ + Sbjct: 1 MARLEGVDLPREKRVEVALTYVFGIGRTLSKQTLAATGVDPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + Q EGDLRR + +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANIQTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|42524355|ref|NP_969735.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100] gi|81616519|sp|Q6MJ33|RS13_BDEBA RecName: Full=30S ribosomal protein S13 gi|39576564|emb|CAE80728.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100] Length = 124 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI+GIG + IC ++ IP E R L + + +IR + Sbjct: 1 MARILGVDLPRNKRVEIALTYIYGIGRPRAAMICKQVGIPSELRTEGLTDEHIAKIRSIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR + +IKRLMDL C+RG+RHR+GLPVRGQ T +NARTRK K + Sbjct: 61 EANFKVEGDLRREIGQSIKRLMDLNCFRGIRHRKGLPVRGQNTRSNARTRKGPKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86152866|ref|ZP_01071071.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613746|ref|YP_001001235.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81-176] gi|167006128|ref|ZP_02271886.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 81-176] gi|158706220|sp|A1W1J4|RS13_CAMJJ RecName: Full=30S ribosomal protein S13 gi|85843751|gb|EAQ60961.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249756|gb|EAQ72715.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 81-176] Length = 121 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I +RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYNKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|310941871|dbj|BAJ24289.1| 30S ribosomal protein S13 [Pseudomonas straminea] Length = 118 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKICAATGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|157737263|ref|YP_001489946.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018] gi|315636980|ref|ZP_07892204.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22] gi|166991598|sp|A8ETK3|RS13_ARCB4 RecName: Full=30S ribosomal protein S13 gi|157699117|gb|ABV67277.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018] gi|315478810|gb|EFU69519.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22] Length = 122 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +S+ I N + I +R +L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRMEYALTYIYGIGLHNSRLILNAVGIDFNKRAFELTEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK K A Sbjct: 61 QENYMVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 TK 122 >gi|325299108|ref|YP_004259025.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170] gi|324318661|gb|ADY36552.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170] Length = 126 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|307543847|ref|YP_003896326.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581] gi|307215871|emb|CBV41141.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581] Length = 118 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI GIG +Q+IC I P +V +L EV +R + Sbjct: 1 MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICVAAGIAPTTKVQELSSEEVDTLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP+ GQRT TNARTRK K Sbjct: 61 GK-YTVEGDLRRDVTLNIKRLMDLGCYRGLRHRRGLPLNGQRTKTNARTRKGPRKPI 116 >gi|239636209|ref|ZP_04677213.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603] gi|239598225|gb|EEQ80718.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603] gi|330685162|gb|EGG96826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU121] Length = 121 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|256420683|ref|YP_003121336.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588] gi|256035591|gb|ACU59135.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588] Length = 126 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI GIG ++Q I K I ++V + E IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQYILEKSGIDFNKKVKDWNDDEQAAIRNVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++VEG LR V MNIKRL+D+ CYRGLRHR+GLP+RGQRT TN+RTRK K + Sbjct: 61 NGEFKVEGQLRSEVQMNIKRLLDIACYRGLRHRKGLPLRGQRTRTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|317153935|ref|YP_004121983.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2] gi|316944186|gb|ADU63237.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2] Length = 123 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG + I + + + ++ L EV IR I Sbjct: 1 MARIAGVDLPRNKRMDIALTYIYGIGRTMALQILDTVKVDWQKNSDDLSADEVNVIRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR + NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK + + R Sbjct: 61 ENNHKVEGDLRRDITSNIKRLMDIGSYRGLRHRRGLPVRGQKTKTNARTRKGPRRSVMGR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|160947675|ref|ZP_02094842.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270] gi|158446809|gb|EDP23804.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270] Length = 122 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV L YI+GIG K+S DI I P+ RV L E+EV IR I Sbjct: 1 MARIVGVDLPREKRVEIGLTYIYGIGRKTSNDILRNAGINPDTRVKDLTEAEVALIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR +AMNIKRL ++ CYRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DK-YLVEGDLRREIAMNIKRLREINCYRGIRHRRGLPVRGQNTKNNARTRKGPKKVSGTK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|149279640|ref|ZP_01885769.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39] gi|149229676|gb|EDM35066.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39] Length = 125 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KR L YI GIG ++Q I + I ++V + E+ IR I Sbjct: 1 MARISGIDLPRNKRGEIGLTYIFGIGRSTAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT N+RTRK K + Sbjct: 61 NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|104773566|ref|YP_618546.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513563|ref|YP_812469.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275667|sp|Q04BZ1|RS13_LACDB RecName: Full=30S ribosomal protein S13 gi|123077333|sp|Q1GBJ4|RS13_LACDA RecName: Full=30S ribosomal protein S13 gi|103422647|emb|CAI97255.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092878|gb|ABJ58031.1| SSU ribosomal protein S13P [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125198|gb|ADY84528.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 116 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG ++Q+IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115 >gi|227530229|ref|ZP_03960278.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540] gi|227349904|gb|EEJ40195.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540] Length = 121 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +Q I + + RV L + QIR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNTRAQKILKDAGVSEDIRVRDLTPEQEEQIRTQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q YQVEGDLRR V +NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DQ-YQVEGDLRREVTLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|110639512|ref|YP_679721.1| 30S ribosomal protein S13 [Cytophaga hutchinsonii ATCC 33406] gi|122966555|sp|Q11QD5|RS13_CYTH3 RecName: Full=30S ribosomal protein S13 gi|110282193|gb|ABG60379.1| SSU ribosomal protein S13P [Cytophaga hutchinsonii ATCC 33406] Length = 125 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IP KR +L YI+GIG S+Q I K + +++V + + E +R I Sbjct: 1 MARISGVDIPDNKRGEVSLTYIYGIGRNSAQSILTKAGVNWDKKVSEWNDDEANAVRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ EG L+ V ++IKRLMD+GCYRGLRHR+GLPVRGQRT N RTRK K + Sbjct: 61 ASEHKTEGALKSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQRTKNNCRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|161523452|ref|YP_001578464.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|167587749|ref|ZP_02380137.1| ribosomal protein S13 [Burkholderia ubonensis Bu] gi|189351775|ref|YP_001947403.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|206558664|ref|YP_002229424.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315] gi|221201588|ref|ZP_03574626.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M] gi|221207337|ref|ZP_03580347.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2] gi|221213475|ref|ZP_03586450.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1] gi|254253497|ref|ZP_04946815.1| Ribosomal protein S13 [Burkholderia dolosa AUO158] gi|226712706|sp|B4E5E3|RS13_BURCJ RecName: Full=30S ribosomal protein S13 gi|226712707|sp|A9ADL6|RS13_BURM1 RecName: Full=30S ribosomal protein S13 gi|124896106|gb|EAY69986.1| Ribosomal protein S13 [Burkholderia dolosa AUO158] gi|160340881|gb|ABX13967.1| ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|189335797|dbj|BAG44867.1| small subunit ribosomal protein S13 [Burkholderia multivorans ATCC 17616] gi|198034701|emb|CAR50568.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315] gi|221166927|gb|EED99398.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1] gi|221172925|gb|EEE05362.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2] gi|221178404|gb|EEE10813.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M] gi|325529701|gb|EGD06564.1| 30S ribosomal protein S13 [Burkholderia sp. TJI49] Length = 121 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG S+ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|328958705|ref|YP_004376091.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4] gi|328675029|gb|AEB31075.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG ++Q + + E RV L ++ IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T NARTRK K R Sbjct: 61 DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSIAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|320009077|gb|ADW03927.1| 30S ribosomal protein S13 [Streptomyces flavogriseus ATCC 33331] Length = 126 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAAAGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|157164203|ref|YP_001467698.1| 30S ribosomal protein S13 [Campylobacter concisus 13826] gi|166231905|sp|A7ZFZ0|RS13_CAMC1 RecName: Full=30S ribosomal protein S13 gi|112800821|gb|EAT98165.1| ribosomal protein S13p/S18e [Campylobacter concisus 13826] Length = 122 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ L YI+GIG S+ I + I ++RV++L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVYELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK K A Sbjct: 61 QEHHVVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 TK 122 >gi|311070789|ref|YP_003975712.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942] gi|310871306|gb|ADP34781.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|294497009|ref|YP_003560709.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551] gi|295702374|ref|YP_003595449.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319] gi|294346946|gb|ADE67275.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551] gi|294800033|gb|ADF37099.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG +++ + + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRPTAEKVLAEAGVSEDTRVRDLTEEELGKIRDIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ + NARTRK + + Sbjct: 61 DS-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRSLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|302379821|ref|ZP_07268305.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3] gi|302312409|gb|EFK94406.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3] Length = 116 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +Y EGDLRR VAMNIKRL ++ CYRGLRH++GLPVRGQ T NARTRK K Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGLRHKKGLPVRGQHTKNNARTRKGPRK 114 >gi|111220571|ref|YP_711365.1| 30S ribosomal protein S13 [Frankia alni ACN14a] gi|123143523|sp|Q0RRP6|RS13_FRAAA RecName: Full=30S ribosomal protein S13 gi|111148103|emb|CAJ59771.1| 30S ribosomal subunit protein S13 [Frankia alni ACN14a] Length = 126 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 83/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S++ + P+ RV L E E++++R+ I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRTRSRETLAATGVNPDTRVRDLSEDEIVRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|258651409|ref|YP_003200565.1| 30S ribosomal protein S13 [Nakamurella multipartita DSM 44233] gi|258554634|gb|ACV77576.1| ribosomal protein S13 [Nakamurella multipartita DSM 44233] Length = 125 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG S ++ I P+ R L + +V+ +R AI Sbjct: 1 MARLVGVDLPRDKRMEIALTYIYGIGRTRSLELLAATGISPDLRSKDLTDEDVLALRDAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + D +VEGDLRR V +I+R M++G Y+GLRHRR LPVRGQRT TNARTRK K Sbjct: 61 DAADLKVEGDLRREVQADIRRKMEIGSYQGLRHRRHLPVRGQRTKTNARTRKGPKKTIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|224373706|ref|YP_002608078.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH] gi|254811159|sp|B9L6U0|RS13_NAUPA RecName: Full=30S ribosomal protein S13 gi|223589832|gb|ACM93568.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH] Length = 122 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K++ AL YI+GIG +S+ I I PE+RV++L E EV + + I Sbjct: 1 MARIAGIDLPKKKKIEYALPYIYGIGLTTSRKILKDTGIDPEKRVYELTEDEVSILNKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK K A+ Sbjct: 61 QSNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGKRKTVGAK 120 Query: 121 KR 122 + Sbjct: 121 AK 122 >gi|182436602|ref|YP_001824321.1| 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777224|ref|ZP_08236489.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1] gi|226712788|sp|B1W3Y2|RS13_STRGG RecName: Full=30S ribosomal protein S13 gi|178465118|dbj|BAG19638.1| putative 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657557|gb|EGE42403.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1] Length = 126 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR V NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225850760|ref|YP_002730994.1| 30S ribosomal protein S13 [Persephonella marina EX-H1] gi|225644837|gb|ACO03023.1| 30S ribosomal protein S13 [Persephonella marina EX-H1] Length = 116 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 68/115 (59%), Positives = 87/115 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 EQ+Y+VEGDLRR VA+NIKRLMD+GCYRG+RHR GLPVRGQRT TNA+TR+ + Sbjct: 61 EQNYKVEGDLRREVAVNIKRLMDMGCYRGIRHRLGLPVRGQRTKTNAKTRRGRKR 115 >gi|142461|gb|AAA22215.1| ribosomal protein S13 [Bacillus subtilis] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG ++Q + + + + RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 DK-LKVEGDLRREVSLNIKRLIEIGTYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|229592881|ref|YP_002875000.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25] gi|259494687|sp|C3K2V4|RS13_PSEFS RecName: Full=30S ribosomal protein S13 gi|229364747|emb|CAY52728.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25] gi|310941661|dbj|BAJ24184.1| 30S ribosomal protein S13 [Pseudomonas fluorescens] Length = 118 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAAKIKDLSDEQIELLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|50364963|ref|YP_053388.1| 30S ribosomal protein S13 [Mesoplasma florum L1] gi|81391972|sp|Q6F1W9|RS13_MESFL RecName: Full=30S ribosomal protein S13 gi|50363519|gb|AAT75504.1| 30S ribosomal protein S13 [Mesoplasma florum L1] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG +SQ + +KL I + R L E ++ I I Sbjct: 1 MARISGVEIPNEKRVVISLTYIYGIGLSTSQKVLSKLNISEDVRTRDLTEEQIKAISTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++VEG+LRR V++NIKRLM++GCYRGLRHR+GLPVRGQ + TNART K K + Sbjct: 61 S-NFKVEGELRREVSLNIKRLMEIGCYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|28867876|ref|NP_790495.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000] gi|66047754|ref|YP_237595.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a] gi|71733419|ref|YP_276684.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213969236|ref|ZP_03397374.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1] gi|237797454|ref|ZP_04585915.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257483207|ref|ZP_05637248.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289623827|ref|ZP_06456781.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648920|ref|ZP_06480263.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. 2250] gi|289675510|ref|ZP_06496400.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae FF5] gi|298489074|ref|ZP_07007096.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|301381743|ref|ZP_07230161.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato Max13] gi|302061057|ref|ZP_07252598.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato K40] gi|302130802|ref|ZP_07256792.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|302189299|ref|ZP_07265972.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae 642] gi|32363285|sp|Q889U9|RS13_PSESM RecName: Full=30S ribosomal protein S13 gi|75500421|sp|Q4ZMR5|RS13_PSEU2 RecName: Full=30S ribosomal protein S13 gi|91207716|sp|Q48D58|RS13_PSE14 RecName: Full=30S ribosomal protein S13 gi|28851112|gb|AAO54190.1| ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000] gi|63258461|gb|AAY39557.1| Ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a] gi|71553972|gb|AAZ33183.1| ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A] gi|213925914|gb|EEB59471.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1] gi|298156386|gb|EFH97484.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322300|gb|EFW78394.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. B076] gi|320331958|gb|EFW87894.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. race 4] gi|330869409|gb|EGH04118.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330879397|gb|EGH13546.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str. race 4] gi|330879420|gb|EGH13569.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330891910|gb|EGH24571.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. mori str. 301020] gi|330899714|gb|EGH31133.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330940912|gb|EGH43863.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. pisi str. 1704B] gi|330962503|gb|EGH62763.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330966889|gb|EGH67149.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330969799|gb|EGH69865.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330976662|gb|EGH76705.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330988260|gb|EGH86363.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331012435|gb|EGH92491.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331018182|gb|EGH98238.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str. M302278PT] gi|331020304|gb|EGI00361.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 118 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|119953289|ref|YP_945498.1| 30S ribosomal protein S13 [Borrelia turicatae 91E135] gi|254811131|sp|A1QZT6|RS13_BORT9 RecName: Full=30S ribosomal protein S13 gi|119862060|gb|AAX17828.1| SSU ribosomal protein S13P [Borrelia turicatae 91E135] Length = 125 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K++ AL I+GIG + +IC K I PE+R L EV ++R+ I Sbjct: 1 MARIAGIDLPNNKQLQIALTSIYGIGRARALEICRKTDILPEKRAKDLDNDEVNKLRKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|26987217|ref|NP_742642.1| 30S ribosomal protein S13 [Pseudomonas putida KT2440] gi|104779777|ref|YP_606275.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48] gi|148545761|ref|YP_001265863.1| 30S ribosomal protein S13 [Pseudomonas putida F1] gi|167031521|ref|YP_001666752.1| 30S ribosomal protein S13 [Pseudomonas putida GB-1] gi|32363292|sp|Q88QL3|RS13_PSEPK RecName: Full=30S ribosomal protein S13 gi|158706264|sp|Q1IFU4|RS13_PSEE4 RecName: Full=30S ribosomal protein S13 gi|166231917|sp|A5VXR9|RS13_PSEP1 RecName: Full=30S ribosomal protein S13 gi|189044288|sp|B0KK88|RS13_PSEPG RecName: Full=30S ribosomal protein S13 gi|24981856|gb|AAN66106.1|AE016239_1 ribosomal protein S13 [Pseudomonas putida KT2440] gi|95108764|emb|CAK13458.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48] gi|148509819|gb|ABQ76679.1| SSU ribosomal protein S13P [Pseudomonas putida F1] gi|166858009|gb|ABY96416.1| ribosomal protein S13 [Pseudomonas putida GB-1] gi|310941070|dbj|BAJ24409.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941100|dbj|BAJ24424.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941631|dbj|BAJ24169.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|310941991|dbj|BAJ24349.1| 30S ribosomal protein S13 [Pseudomonas putida] gi|313496841|gb|ADR58207.1| RpsM [Pseudomonas putida BIRD-1] Length = 118 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|84685393|ref|ZP_01013291.1| 30S ribosomal protein S13 [Maritimibacter alkaliphilus HTCC2654] gi|84666550|gb|EAQ13022.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2654] Length = 116 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 71/115 (61%), Positives = 83/115 (72%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 NIP KRV AL YI GIG S++ IC I RRV++L ++EV+ IR+ I+ +Y VE Sbjct: 2 NIPTHKRVPIALTYITGIGHTSAKSICEATNIDVTRRVNELSDAEVLTIREHIDANYTVE 61 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 GDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K+ Sbjct: 62 GDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGKKK 116 >gi|261364877|ref|ZP_05977760.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996] gi|288566925|gb|EFC88485.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996] Length = 120 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V L I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPITKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|22536267|ref|NP_687118.1| 30S ribosomal protein S13 [Streptococcus agalactiae 2603V/R] gi|25010157|ref|NP_734552.1| 30S ribosomal protein S13 [Streptococcus agalactiae NEM316] gi|76788115|ref|YP_328807.1| 30S ribosomal protein S13 [Streptococcus agalactiae A909] gi|76798217|ref|ZP_00780467.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21] gi|77406112|ref|ZP_00783186.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B] gi|77412629|ref|ZP_00788908.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111] gi|54039353|sp|P66391|RS13_STRA5 RecName: Full=30S ribosomal protein S13 gi|54042124|sp|P66390|RS13_STRA3 RecName: Full=30S ribosomal protein S13 gi|91207627|sp|Q3K3U6|RS13_STRA1 RecName: Full=30S ribosomal protein S13 gi|22533088|gb|AAM98990.1|AE014195_9 ribosomal protein S13 [Streptococcus agalactiae 2603V/R] gi|23094508|emb|CAD45727.1| ribosomal protein S13 [Streptococcus agalactiae NEM316] gi|76563172|gb|ABA45756.1| ribosomal protein S13 [Streptococcus agalactiae A909] gi|76586426|gb|EAO62934.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21] gi|77161321|gb|EAO72353.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111] gi|77175293|gb|EAO78088.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B] gi|319743971|gb|EFV96351.1| 30S ribosomal protein S13 [Streptococcus agalactiae ATCC 13813] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|86149387|ref|ZP_01067618.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85840169|gb|EAQ57427.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni CF93-6] Length = 121 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 68/120 (56%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++R H+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRFHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|306821594|ref|ZP_07455192.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550339|gb|EFM38332.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 122 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ L YI GIG ++S I I R+ L E +V +R+ I Sbjct: 1 MARIAGVDLPRDKRVIIGLTYIFGIGKQTSAKILATTGIDESIRIKDLSEEQVNLLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDL+R +++NIKRL D+ CYRGLRH +GLPVRGQ+T TNARTRK + + Sbjct: 61 DNNYTVEGDLKREISLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNARTRKGPKRIVGRK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|189460707|ref|ZP_03009492.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136] gi|198273980|ref|ZP_03206512.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135] gi|189432666|gb|EDV01651.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136] gi|198273058|gb|EDY97327.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135] Length = 126 Score = 171 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|223042524|ref|ZP_03612573.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14] gi|242371873|ref|ZP_04817447.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1] gi|314934274|ref|ZP_07841633.1| 30S ribosomal protein S13 [Staphylococcus caprae C87] gi|222444187|gb|EEE50283.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14] gi|242350380|gb|EES41981.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1] gi|313652204|gb|EFS15967.1| 30S ribosomal protein S13 [Staphylococcus caprae C87] Length = 121 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|313887064|ref|ZP_07820763.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica PR426713P-I] gi|312923475|gb|EFR34285.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica PR426713P-I] gi|332176609|gb|AEE12299.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica DSM 20707] Length = 126 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG S+ I + + +V + + IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQ 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I Y+VEGDLR +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK K Sbjct: 61 ISSGYKVEGDLRSETQLNIKRLMDIGCYRGIRHRLGLPLRGQSTKNNARTRKGKRKTVAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|269955460|ref|YP_003325249.1| 30S ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894] gi|269304141|gb|ACZ29691.1| ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894] Length = 124 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+G+G + I P+ RV L +++++ +R + Sbjct: 1 MARLIGVDLPREKRVEIALTYIYGVGRTRASQTLEATGISPDVRVKDLDDAQLVALRDYL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGSFKLEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|325269511|ref|ZP_08136127.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608] gi|325856026|ref|ZP_08171915.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A] gi|327313214|ref|YP_004328651.1| 30S ribosomal protein S13 [Prevotella denticola F0289] gi|324988130|gb|EGC20097.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608] gi|325483698|gb|EGC86662.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A] gi|326945033|gb|AEA20918.1| 30S ribosomal protein S13 [Prevotella denticola F0289] Length = 146 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 21 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREI 80 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 81 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 133 >gi|15610596|ref|NP_217977.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Rv] gi|15843055|ref|NP_338092.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CDC1551] gi|31794636|ref|NP_857129.1| 30S ribosomal protein S13 [Mycobacterium bovis AF2122/97] gi|121639380|ref|YP_979604.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663325|ref|YP_001284848.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|148824670|ref|YP_001289424.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis F11] gi|167966773|ref|ZP_02549050.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|215405499|ref|ZP_03417680.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|215413374|ref|ZP_03422058.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|215428967|ref|ZP_03426886.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T92] gi|218755238|ref|ZP_03534034.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis GM 1503] gi|224991876|ref|YP_002646565.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172] gi|253800505|ref|YP_003033506.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 1435] gi|254234052|ref|ZP_04927377.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C] gi|254366061|ref|ZP_04982106.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. Haarlem] gi|254552563|ref|ZP_05143010.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188515|ref|ZP_05765989.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CPHL_A] gi|260202643|ref|ZP_05770134.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|260206831|ref|ZP_05774322.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis K85] gi|289445060|ref|ZP_06434804.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|289449164|ref|ZP_06438908.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A] gi|289555731|ref|ZP_06444941.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605] gi|289576196|ref|ZP_06456423.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85] gi|289747293|ref|ZP_06506671.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|289752184|ref|ZP_06511562.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92] gi|289763642|ref|ZP_06523020.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503] gi|294995766|ref|ZP_06801457.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 210] gi|297636119|ref|ZP_06953899.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN 4207] gi|297733119|ref|ZP_06962237.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN R506] gi|298526944|ref|ZP_07014353.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|306777808|ref|ZP_07416145.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001] gi|306782526|ref|ZP_07420863.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002] gi|306786345|ref|ZP_07424667.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003] gi|306790714|ref|ZP_07429036.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004] gi|306795243|ref|ZP_07433545.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005] gi|306799432|ref|ZP_07437734.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006] gi|306805279|ref|ZP_07441947.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008] gi|306809464|ref|ZP_07446132.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007] gi|306969572|ref|ZP_07482233.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009] gi|306973926|ref|ZP_07486587.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010] gi|307081635|ref|ZP_07490805.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011] gi|307086241|ref|ZP_07495354.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012] gi|313660450|ref|ZP_07817330.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN V2475] gi|6094153|sp|O06327|RS13_MYCTU RecName: Full=30S ribosomal protein S13 gi|38605717|sp|P45813|RS13_MYCBO RecName: Full=30S ribosomal protein S13 gi|158706248|sp|A1KPE6|RS13_MYCBP RecName: Full=30S ribosomal protein S13 gi|158706252|sp|A5U8D6|RS13_MYCTA RecName: Full=30S ribosomal protein S13 gi|254811157|sp|C1AHR8|RS13_MYCBT RecName: Full=30S ribosomal protein S13 gi|2104383|emb|CAB08726.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium tuberculosis H37Rv] gi|13883399|gb|AAK47906.1| ribosomal protein S13 [Mycobacterium tuberculosis CDC1551] gi|31620233|emb|CAD95676.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium bovis AF2122/97] gi|121495028|emb|CAL73514.1| Probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599581|gb|EAY58685.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C] gi|134151574|gb|EBA43619.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str. Haarlem] gi|148507477|gb|ABQ75286.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra] gi|148723197|gb|ABR07822.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis F11] gi|224774991|dbj|BAH27797.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172] gi|253322008|gb|ACT26611.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 1435] gi|289417979|gb|EFD15219.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46] gi|289422122|gb|EFD19323.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A] gi|289440363|gb|EFD22856.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605] gi|289540627|gb|EFD45205.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85] gi|289687821|gb|EFD55309.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987] gi|289692771|gb|EFD60200.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92] gi|289711148|gb|EFD75164.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503] gi|298496738|gb|EFI32032.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A] gi|308213892|gb|EFO73291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001] gi|308324843|gb|EFP13694.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002] gi|308329097|gb|EFP17948.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003] gi|308332905|gb|EFP21756.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004] gi|308336565|gb|EFP25416.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005] gi|308340440|gb|EFP29291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006] gi|308344304|gb|EFP33155.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007] gi|308348195|gb|EFP37046.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008] gi|308352919|gb|EFP41770.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009] gi|308356762|gb|EFP45613.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010] gi|308360707|gb|EFP49558.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011] gi|308364322|gb|EFP53173.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012] gi|323717944|gb|EGB27133.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CDC1551A] gi|326905306|gb|EGE52239.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis W-148] gi|328460236|gb|AEB05659.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 4207] Length = 124 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK + + Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 [Campylobacter fetus subsp. fetus 82-40] gi|158706219|sp|A0RM33|RS13_CAMFF RecName: Full=30S ribosomal protein S13 gi|118414680|gb|ABK83100.1| ribosomal protein S13p/S18e [Campylobacter fetus subsp. fetus 82-40] Length = 122 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV L YI+GIG +S+ I N + I ++RV++L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILNAVGISYDKRVYELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK K A Sbjct: 61 QEHYMVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 TK 122 >gi|304438882|ref|ZP_07398805.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372548|gb|EFM26131.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 120 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG S +I + P+ RV L E+EV +IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIFGIGRSRSNEILKNAEVNPDTRVKDLTEAEVARIRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR VAMNIKRL ++ CYRG+RH RGLPVRGQ T NARTRK K V++ Sbjct: 61 DK-YHVEGDLRRDVAMNIKRLREIKCYRGIRHMRGLPVRGQNTKNNARTRKGPKKL-VSK 118 Query: 121 KR 122 K+ Sbjct: 119 KK 120 >gi|319893176|ref|YP_004150051.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius HKU10-03] gi|317162872|gb|ADV06415.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius HKU10-03] gi|323463776|gb|ADX75929.1| ribosomal protein S13 [Staphylococcus pseudintermedius ED99] Length = 121 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG S+Q I ++ + + RV L + E+ +IR+ + Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGIGKTSAQKILSEANVSEDTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPV GQ+T NARTRK K + Sbjct: 61 D-GYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVNGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|325104844|ref|YP_004274498.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145] gi|324973692|gb|ADY52676.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145] Length = 125 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI+GIG K++Q+I + I +++V + + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIYGIGRKTAQNILTQAGISFDKKVQEWTDEELTAIRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEG LR V +NIKRLMD+GCYRGLRHR+GLP+RGQRT N+RTRK K + Sbjct: 61 SESIKVEGQLRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|171060596|ref|YP_001792945.1| 30S ribosomal protein S13 [Leptothrix cholodnii SP-6] gi|226712756|sp|B1Y8B4|RS13_LEPCP RecName: Full=30S ribosomal protein S13 gi|170778041|gb|ACB36180.1| ribosomal protein S13 [Leptothrix cholodnii SP-6] Length = 121 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+G+G ++Q IC I ++V L +S++ +IR+ + Sbjct: 1 MARIAGINIPPHKHAEIGLTSIYGVGRTTAQKICEACGIAYNKKVKDLDDSDLEKIREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TN+RTRK KG A Sbjct: 61 GR-LTIEGDLRREISINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNSRTRKGPKKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|88854652|ref|ZP_01129318.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1] gi|88815813|gb|EAR25669.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1] Length = 124 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + I E RVH L + ++I +R I Sbjct: 1 MARLAGVDIPRDKRVEVALTYIYGVGRTRALKTLADTQISGEIRVHDLTDDQLIALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++QVEGDLRR VA +I+R +++G Y+G+RHR+GLPV GQRT TNARTRK + + Sbjct: 61 EGNFQVEGDLRREVAADIRRKVEIGSYQGIRHRKGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|288554751|ref|YP_003426686.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4] gi|288545911|gb|ADC49794.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4] Length = 121 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L YI+G+G S +I + + + RV L E E+ +IR+A+ Sbjct: 1 MARVAGVDIPRDKRVVVSLTYIYGVGKTKSSEILAEAGVSEDTRVRDLTEEELGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ + NARTRK + + Sbjct: 61 EA-HTVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261367777|ref|ZP_05980660.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] gi|282570575|gb|EFB76110.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176] Length = 123 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L Y++GIG ++ +I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRIQVGLTYVYGIGQSTADEILAGTGINPDTRVKDLTSDEEAKIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLRR VA++IKRL ++ CYRG+RHR+GLP RGQRT TNART K + Sbjct: 61 DKNNIMVEGDLRRNVALDIKRLTEIQCYRGVRHRKGLPCRGQRTKTNARTCKGPKRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|258648135|ref|ZP_05735604.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259] gi|260852016|gb|EEX71885.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259] Length = 126 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRGIKVSDWTDDQAGKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 ISNEYKVEGDLRGEIQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|229823513|ref|ZP_04449582.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271] gi|229786957|gb|EEP23071.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271] Length = 120 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG K++Q + + + + RV L E+ +IR+ I Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGIGLKTAQQVLKQANVSEDTRVKDLSNDELDRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR +++NIKRL ++G YRGLRHRRGLPVRGQ T NARTRK K + Sbjct: 61 D-GLKVEGDLRREISLNIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPKKMVTGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|198282661|ref|YP_002218982.1| 30S ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667353|ref|YP_002424854.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270] gi|226712683|sp|B7J4A1|RS13_ACIF2 RecName: Full=30S ribosomal protein S13 gi|226712684|sp|B5EM96|RS13_ACIF5 RecName: Full=30S ribosomal protein S13 gi|198247182|gb|ACH82775.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519566|gb|ACK80152.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 118 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 67/118 (56%), Positives = 82/118 (69%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K++ AL YI+GIG ++ + + I + RV + E E+ +IR + Sbjct: 1 MARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRVKDISEPELERIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK K Sbjct: 61 AK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKSIT 117 >gi|225849520|ref|YP_002729685.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644417|gb|ACN99467.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1] Length = 116 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 67/115 (58%), Positives = 86/115 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPEELNTIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 EQ+Y+VEGDLRR VA+ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+ K Sbjct: 61 EQNYKVEGDLRREVAVAIKRLVDMGCYRGVRHRLGLPVRGQRTKTNAKTRRGKRK 115 >gi|152980690|ref|YP_001355078.1| 30S ribosomal protein S13 [Janthinobacterium sp. Marseille] gi|158706240|sp|A6T3I1|RS13_JANMA RecName: Full=30S ribosomal protein S13 gi|151280767|gb|ABR89177.1| small subunit ribosomal protein S13 [Janthinobacterium sp. Marseille] Length = 121 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG SQ IC+ +P ++V L ++E+ ++R I Sbjct: 1 MARIAGVNVPNHQHTVIGLTAIYGIGRPRSQKICDTAGVPTTKKVKDLDDNELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK K + Sbjct: 61 AK-FIVEGDLRRELSMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|84494747|ref|ZP_00993866.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649] gi|84384240|gb|EAQ00120.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649] Length = 125 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G SSQ I P RV L + ++ +R I Sbjct: 1 MARLQGVDLPREKRVEIALTYIFGVGRSSSQKALAATGIDPNVRVKDLTDVNLVALRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +VEGDLRR V +I+R +++G Y+G RHR GLPV GQRT TNARTRK + + Sbjct: 61 DENLKVEGDLRREVQADIRRKVEIGSYQGRRHRSGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|78064947|ref|YP_367716.1| 30S ribosomal protein S13 [Burkholderia sp. 383] gi|107024280|ref|YP_622607.1| 30S ribosomal protein S13 [Burkholderia cenocepacia AU 1054] gi|116688395|ref|YP_834018.1| 30S ribosomal protein S13 [Burkholderia cenocepacia HI2424] gi|170731705|ref|YP_001763652.1| 30S ribosomal protein S13 [Burkholderia cenocepacia MC0-3] gi|254246580|ref|ZP_04939901.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184] gi|91207692|sp|Q39KE4|RS13_BURS3 RecName: Full=30S ribosomal protein S13 gi|123371102|sp|Q1BRX1|RS13_BURCA RecName: Full=30S ribosomal protein S13 gi|158706217|sp|A0K3P8|RS13_BURCH RecName: Full=30S ribosomal protein S13 gi|226712705|sp|B1JU45|RS13_BURCC RecName: Full=30S ribosomal protein S13 gi|77965692|gb|ABB07072.1| SSU ribosomal protein S13P [Burkholderia sp. 383] gi|105894469|gb|ABF77634.1| SSU ribosomal protein S13P [Burkholderia cenocepacia AU 1054] gi|116646484|gb|ABK07125.1| SSU ribosomal protein S13P [Burkholderia cenocepacia HI2424] gi|124871356|gb|EAY63072.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184] gi|169814947|gb|ACA89530.1| ribosomal protein S13 [Burkholderia cenocepacia MC0-3] Length = 121 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G S+ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|216263668|ref|ZP_03435663.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1] gi|215980512|gb|EEC21333.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1] Length = 125 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 84/121 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|320352936|ref|YP_004194275.1| 30S ribosomal protein S13P [Desulfobulbus propionicus DSM 2032] gi|320121438|gb|ADW16984.1| SSU ribosomal protein S13P [Desulfobulbus propionicus DSM 2032] Length = 122 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 71/122 (58%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + RAL YI+GIG S++ I +K +P + L +V +IR I Sbjct: 1 MARIAGVDLPRNKHMDRALTYIYGIGLTSARQILDKADLPYQMNSDDLSADDVNRIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y VEGD RR V+M+IKRLMDLGCYRG RHRR LPVRGQRT TNARTRK +G R Sbjct: 61 ENSYVVEGDRRREVSMDIKRLMDLGCYRGRRHRRSLPVRGQRTKTNARTRKGPRRGAAVR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|154173907|ref|YP_001409134.1| 30S ribosomal protein S13 [Campylobacter curvus 525.92] gi|166231906|sp|A7H0Z2|RS13_CAMC5 RecName: Full=30S ribosomal protein S13 gi|112802271|gb|EAT99615.1| ribosomal protein S13p/S18e [Campylobacter curvus 525.92] Length = 122 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ L YI+GIG S+ I + I ++RV +L E E IR+ I Sbjct: 1 MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVFELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK K A Sbjct: 61 QEHHIVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 TK 122 >gi|228474843|ref|ZP_04059574.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119] gi|314935855|ref|ZP_07843207.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis C80] gi|228271506|gb|EEK12874.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119] gi|313656420|gb|EFS20160.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis C80] Length = 121 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 D-GYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|313123133|ref|YP_004033392.1| 30S ribosomal protein s13 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279696|gb|ADQ60415.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 116 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++++IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115 >gi|296113776|ref|YP_003627714.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4] gi|295921470|gb|ADG61821.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4] gi|326562121|gb|EGE12449.1| 30S ribosomal protein S13 [Moraxella catarrhalis 7169] gi|326564514|gb|EGE14740.1| 30S ribosomal protein S13 [Moraxella catarrhalis 46P47B1] gi|326565697|gb|EGE15860.1| 30S ribosomal protein S13 [Moraxella catarrhalis 12P80B1] gi|326566266|gb|EGE16418.1| 30S ribosomal protein S13 [Moraxella catarrhalis 103P14B1] gi|326567082|gb|EGE17204.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC1] gi|326568346|gb|EGE18426.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC7] gi|326572247|gb|EGE22242.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC8] gi|326574589|gb|EGE24529.1| 30S ribosomal protein S13 [Moraxella catarrhalis O35E] gi|326574845|gb|EGE24775.1| 30S ribosomal protein S13 [Moraxella catarrhalis 101P30B1] gi|326576169|gb|EGE26084.1| 30S ribosomal protein S13 [Moraxella catarrhalis CO72] Length = 118 Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +++ I + I ++ L +S++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTTAKQILAAVGIEETTKIGSLDDSQLDAVRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y VEGDLRR V+MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK K Sbjct: 61 -ANYTVEGDLRREVSMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRKGPRKAI 116 >gi|288925691|ref|ZP_06419623.1| 30S ribosomal protein S13 [Prevotella buccae D17] gi|315606480|ref|ZP_07881495.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574] gi|288337629|gb|EFC75983.1| 30S ribosomal protein S13 [Prevotella buccae D17] gi|315251886|gb|EFU31860.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|256847787|ref|ZP_05553232.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN] gi|256715476|gb|EEU30452.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNSTAQKILADAGVSEDVRVRDLTPDQEEKIRSQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 E-NIKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163790170|ref|ZP_02184604.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7] gi|159874661|gb|EDP68731.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV+ +L YI+GIG ++Q + + E RV L ++ IR I Sbjct: 1 MARIAGVDIPRDKRVIISLTYIYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSITGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|325272030|ref|ZP_08138473.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51] gi|310941811|dbj|BAJ24259.1| 30S ribosomal protein S13 [Pseudomonas fulva] gi|324102834|gb|EGC00238.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51] Length = 118 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICVDAGVNPAAKIKDLSDEQIETLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116 >gi|257459217|ref|ZP_05624336.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268] gi|257443602|gb|EEV18726.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268] Length = 122 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I + I ++RV L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDAAGISYDKRVADLSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK K A Sbjct: 61 QEHYMVEGDLRKQVAMDIKALMDLGGYRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 AK 122 >gi|157149729|ref|YP_001451211.1| 30S ribosomal protein S13 [Streptococcus gordonii str. Challis substr. CH1] gi|262283558|ref|ZP_06061323.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA] gi|189044302|sp|A8AZK1|RS13_STRGC RecName: Full=30S ribosomal protein S13 gi|157074523|gb|ABV09206.1| ribosomal protein S13p/S18e [Streptococcus gordonii str. Challis substr. CH1] gi|262260615|gb|EEY79316.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDVRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|282878781|ref|ZP_06287549.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310] gi|317503957|ref|ZP_07961965.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606] gi|281299172|gb|EFA91573.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310] gi|315664983|gb|EFV04642.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|53715442|ref|YP_101434.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46] gi|60683414|ref|YP_213558.1| 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343] gi|253566694|ref|ZP_04844147.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5] gi|255011670|ref|ZP_05283796.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] gi|265767572|ref|ZP_06095238.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16] gi|313149506|ref|ZP_07811699.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] gi|81313534|sp|Q5L8D3|RS13_BACFN RecName: Full=30S ribosomal protein S13 gi|81381130|sp|Q64NN2|RS13_BACFR RecName: Full=30S ribosomal protein S13 gi|52218307|dbj|BAD50900.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46] gi|60494848|emb|CAH09655.1| putative 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343] gi|251944866|gb|EES85341.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5] gi|263252877|gb|EEZ24389.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16] gi|301164899|emb|CBW24460.1| putative 30S ribosomal protein S13 [Bacteroides fragilis 638R] gi|313138273|gb|EFR55633.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|326692214|ref|ZP_08229219.1| 30S ribosomal protein S13 [Leuconostoc argentinum KCTC 3773] Length = 123 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q I + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLTADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKALQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|189465441|ref|ZP_03014226.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM 17393] gi|224537840|ref|ZP_03678379.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus DSM 14838] gi|189437715|gb|EDV06700.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM 17393] gi|224520526|gb|EEF89631.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus DSM 14838] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEVALTYIYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +++VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEFKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|283953796|ref|ZP_06371327.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414] gi|283794837|gb|EFC33575.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 91/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG +S+ I +K+ I ++RVH+L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLFASRKILDKVGISYDKRVHELSEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK K A+ Sbjct: 61 QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120 >gi|121592835|ref|YP_984731.1| 30S ribosomal protein S13 [Acidovorax sp. JS42] gi|222109615|ref|YP_002551879.1| 30S ribosomal protein s13 [Acidovorax ebreus TPSY] gi|319764617|ref|YP_004128554.1| 30S ribosomal protein s13 [Alicycliphilus denitrificans BC] gi|330826874|ref|YP_004390177.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601] gi|158706210|sp|A1W330|RS13_ACISJ RecName: Full=30S ribosomal protein S13 gi|254811148|sp|B9MBV9|RS13_DIAST RecName: Full=30S ribosomal protein S13 gi|120604915|gb|ABM40655.1| SSU ribosomal protein S13P [Acidovorax sp. JS42] gi|221729059|gb|ACM31879.1| ribosomal protein S13 [Acidovorax ebreus TPSY] gi|317119178|gb|ADV01667.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans BC] gi|329312246|gb|AEB86661.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG ++ IC I ++V +L ++++ +IR I Sbjct: 1 MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300775036|ref|ZP_07084899.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910] gi|300506851|gb|EFK37986.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910] Length = 125 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI+G+G +S +I I +++V++ + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIYGVGRSTSSEILKAAGISEDKKVNEWNDDELAAIRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SENVKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254383147|ref|ZP_04998501.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1] gi|194342046|gb|EDX23012.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ G+G S++I + P+ RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGVGRTRSKEILAATGVNPDTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREIQADIRRKVEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|184155967|ref|YP_001844307.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956] gi|227515511|ref|ZP_03945560.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931] gi|260662776|ref|ZP_05863670.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN] gi|226712752|sp|B2GDU5|RS13_LACF3 RecName: Full=30S ribosomal protein S13 gi|183227311|dbj|BAG27827.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956] gi|227086124|gb|EEI21436.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931] gi|260552857|gb|EEX25856.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILANAGVSEDIRVRDLTPDQEEKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q +VEGDLRR V++NIKRL ++G YRG+RHR GLPVRGQ T NARTRK + Sbjct: 61 DQ-IKVEGDLRREVSLNIKRLQEIGSYRGMRHRHGLPVRGQHTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|26554442|ref|NP_758376.1| 30S ribosomal protein S13 [Mycoplasma penetrans HF-2] gi|32363326|sp|Q8EUD6|RS13_MYCPE RecName: Full=30S ribosomal protein S13 gi|26454452|dbj|BAC44780.1| ribosomal protein S13 [Mycoplasma penetrans HF-2] Length = 124 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KRVV +L YI GIG SQ+I +K I ++V L E E+ IR+ I Sbjct: 1 MARILGVDIPNNKRVVISLTYIFGIGKSRSQEILSKAKIDENKKVSALSEEELATIRK-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y +EGDLRR VAMNIKRLM++G YRG+RHRR LPVRGQRT NARTRK K + Sbjct: 60 ASEYVIEGDLRREVAMNIKRLMEIGSYRGIRHRRNLPVRGQRTKCNARTRKGPRKTVANK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|52426081|ref|YP_089218.1| 30S ribosomal protein S13 [Mannheimia succiniciproducens MBEL55E] gi|81386597|sp|Q65QX7|RS13_MANSM RecName: Full=30S ribosomal protein S13 gi|52308133|gb|AAU38633.1| RpsM protein [Mannheimia succiniciproducens MBEL55E] Length = 118 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRSQAICAAAGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|242237881|ref|YP_002986062.1| 30S ribosomal protein S13 [Dickeya dadantii Ech703] gi|242129938|gb|ACS84240.1| ribosomal protein S13 [Dickeya dadantii Ech703] Length = 118 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ IC I + ++ +L E ++ +R+ + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAICAAAGIAEDVKISELSEEQIETLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|312870485|ref|ZP_07730604.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3] gi|311093947|gb|EFQ52272.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3] Length = 121 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15603258|ref|NP_246332.1| 30S ribosomal protein S13 [Pasteurella multocida subsp. multocida str. Pm70] gi|32363393|sp|Q9CL51|RS13_PASMU RecName: Full=30S ribosomal protein S13 gi|12721768|gb|AAK03477.1| RpS13 [Pasteurella multocida subsp. multocida str. Pm70] Length = 118 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRAQAICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|326332224|ref|ZP_08198504.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1] gi|325949930|gb|EGD41990.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1] Length = 125 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI+GIG +SQ + + P RVH L E E++++R I Sbjct: 1 MARLQGVDLPRDKRVEIALTYIYGIGRTTSQKLLEATGVNPNTRVHALAEDELVKLRDEI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E Q Q EGDLRR V +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK + Sbjct: 61 EAQGIQTEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|150003365|ref|YP_001298109.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482] gi|254881346|ref|ZP_05254056.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA] gi|294777843|ref|ZP_06743287.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510] gi|319640347|ref|ZP_07995072.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A] gi|158706336|sp|A6KYH3|RS13_BACV8 RecName: Full=30S ribosomal protein S13 gi|149931789|gb|ABR38487.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482] gi|254834139|gb|EET14448.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA] gi|294448297|gb|EFG16853.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510] gi|317388122|gb|EFV68976.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A] Length = 126 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|116624177|ref|YP_826333.1| 30S ribosomal protein S13 [Candidatus Solibacter usitatus Ellin6076] gi|122253107|sp|Q01WB7|RS13_SOLUE RecName: Full=30S ribosomal protein S13 gi|116227339|gb|ABJ86048.1| SSU ribosomal protein S13P [Candidatus Solibacter usitatus Ellin6076] Length = 128 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P KR L YI+GIG S+ + ++ I ++++ L E E+ ++R + Sbjct: 1 MARLAGVDLPPGKRAEIGLTYIYGIGRTRSKSLLHRAGIDFDKKIRDLTEDEINKVRTIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++ VEGDLR+ ++MNIKR +++G YRGLRHRR LPVRGQRTHTNARTRK +G VA Sbjct: 61 EEEGAVEGDLRKEISMNIKRHIEMGSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAN 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|170017921|ref|YP_001728840.1| ribosomal protein S13 [Leuconostoc citreum KM20] gi|226712757|sp|B1MVZ2|RS13_LEUCK RecName: Full=30S ribosomal protein S13 gi|169804778|gb|ACA83396.1| Ribosomal protein S13 [Leuconostoc citreum KM20] Length = 123 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q I + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|302337499|ref|YP_003802705.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293] gi|301634684|gb|ADK80111.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293] Length = 121 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P K +L YI+GIG S+ +IC K I P+ +++ L +V ++R I Sbjct: 1 MARIAGIDLP-NKATKISLTYIYGIGRSSAMEICKKAGIDPDSKMNDLSAEDVNKLRTLI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + DY VEG LR +A+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 60 DSDYTVEGRLRTQIALNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKG 111 >gi|296272959|ref|YP_003655590.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299] gi|296097133|gb|ADG93083.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299] Length = 120 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 68/119 (57%), Positives = 85/119 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI GIG +S+ I + I ++R H+L E E IR I Sbjct: 1 MARIAGVDLPNKKRMEYALTYIFGIGLYNSRLILDATGISYDKRAHELTEDEAAAIRLEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++YQVEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK + A Sbjct: 61 QKNYQVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKRTVGA 119 >gi|167564393|ref|ZP_02357309.1| 30S ribosomal protein S13 [Burkholderia oklahomensis EO147] gi|167571540|ref|ZP_02364414.1| 30S ribosomal protein S13 [Burkholderia oklahomensis C6786] Length = 121 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICAASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116617352|ref|YP_817723.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431318|ref|ZP_03913371.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122272447|sp|Q03ZM2|RS13_LEUMM RecName: Full=30S ribosomal protein S13 gi|116096199|gb|ABJ61350.1| SSU ribosomal protein S13P [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352911|gb|EEJ43084.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 123 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 56/123 (45%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLAEAGVSEDVRVRDLTSDQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|310941691|dbj|BAJ24199.1| 30S ribosomal protein S13 [Pseudomonas alcaligenes] Length = 118 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAAKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-LTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|189501630|ref|YP_001957347.1| 30S ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2] gi|226712687|sp|B3EUJ9|RS13_AMOA5 RecName: Full=30S ribosomal protein S13 gi|189497071|gb|ACE05618.1| ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2] Length = 126 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 58/118 (49%), Positives = 73/118 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KR AL YI GIG S+ I + ++RV + E IR I Sbjct: 1 MARILGVDIPDNKRGEIALTYIFGIGRSSANQILAAAGVNKDKRVSSWTDEESQTIRTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 ++Y+VEG+L+ + +NIKRL+D+GCYRG RH GLPVRGQ T NARTRK K Sbjct: 61 NENYKVEGELKSEIRLNIKRLVDIGCYRGRRHVLGLPVRGQSTKNNARTRKGKRKTVA 118 >gi|303234802|ref|ZP_07321428.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4] gi|302494143|gb|EFL53923.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4] Length = 116 Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats. Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK K Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPKK 114 >gi|313889578|ref|ZP_07823223.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026] gi|313122087|gb|EFR45181.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +SQ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKPTAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|297588216|ref|ZP_06946860.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516] gi|297574905|gb|EFH93625.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516] Length = 116 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRTEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK K Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPRK 114 >gi|83648830|ref|YP_437265.1| 30S ribosomal protein S13 [Hahella chejuensis KCTC 2396] gi|123530605|sp|Q2S934|RS13_HAHCH RecName: Full=30S ribosomal protein S13 gi|83636873|gb|ABC32840.1| Ribosomal protein S13 [Hahella chejuensis KCTC 2396] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +L YI+GIG +S+ +C + I P+ +V L E ++ +R I Sbjct: 1 MARIAGVNIPDNKHTEVSLTYIYGIGRTTSRGLCERTGISPQAKVKDLSEEQLDVLRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V MNIKRL DLGCYRGLRHR LPVRGQRT TNARTRK K Sbjct: 61 AK-MVVEGDLRREVQMNIKRLKDLGCYRGLRHRHSLPVRGQRTKTNARTRKGPRKPI 116 >gi|70725827|ref|YP_252741.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435] gi|82581615|sp|Q4L890|RS13_STAHJ RecName: Full=30S ribosomal protein S13 gi|68446551|dbj|BAE04135.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG +++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|330953175|gb|EGH53435.1| 30S ribosomal protein S13 [Pseudomonas syringae Cit 7] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC + P ++ L + ++ Q+R + Sbjct: 1 MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDL R + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTTEGDLGREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|27468717|ref|NP_765354.1| 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228] gi|57867677|ref|YP_189370.1| 30S ribosomal protein S13 [Staphylococcus epidermidis RP62A] gi|242243971|ref|ZP_04798414.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144] gi|251812071|ref|ZP_04826544.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060] gi|282875366|ref|ZP_06284239.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135] gi|293368457|ref|ZP_06615081.1| ribosomal protein S13/S18 [Staphylococcus epidermidis M23864:W2(grey)] gi|32363310|sp|Q8CRI3|RS13_STAES RecName: Full=30S ribosomal protein S13 gi|81673639|sp|Q5HM23|RS13_STAEQ RecName: Full=30S ribosomal protein S13 gi|27316265|gb|AAO05440.1|AE016750_45 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228] gi|57638335|gb|AAW55123.1| ribosomal protein S13/S18 [Staphylococcus epidermidis RP62A] gi|242232604|gb|EES34916.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144] gi|251804405|gb|EES57062.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060] gi|281296131|gb|EFA88652.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135] gi|291317415|gb|EFE57837.1| ribosomal protein S13/S18 [Staphylococcus epidermidis M23864:W2(grey)] gi|319400601|gb|EFV88826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis FRI909] gi|329731229|gb|EGG67599.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU144] gi|329736494|gb|EGG72762.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU028] gi|329737063|gb|EGG73318.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU045] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L Y++GIG ++ I + + + RV L + E+ +IR+ + Sbjct: 1 MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +NIKRLM++ YRG+RHRRGLPVRGQ+T NARTRK K + Sbjct: 61 D-GYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300721388|ref|YP_003710659.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC 19061] gi|297627876|emb|CBJ88422.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC 19061] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAENVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|56477616|ref|YP_159205.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1] gi|81357336|sp|Q5P310|RS13_AZOSE RecName: Full=30S ribosomal protein S13 gi|56313659|emb|CAI08304.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1] Length = 120 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG +Q IC+ + ++ L ES++ ++R + Sbjct: 1 MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAANVVRSVKMKDLTESDMERLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|311693292|gb|ADP96165.1| ribosomal protein S13, bacterial-type [marine bacterium HP15] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHAVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLSDEQLEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK K Sbjct: 61 GK-VSVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116 >gi|152964682|ref|YP_001360466.1| 30S ribosomal protein S13 [Kineococcus radiotolerans SRS30216] gi|189044279|sp|A6W5W3|RS13_KINRD RecName: Full=30S ribosomal protein S13 gi|151359199|gb|ABS02202.1| ribosomal protein S13 [Kineococcus radiotolerans SRS30216] Length = 126 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G +++ + P+ RV L + +++ +R I Sbjct: 1 MARLVGVDLPREKRLEIALTYIFGVGRTRAKETLAATGVSPDLRVRDLSDDDLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYRVEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238921421|ref|YP_002934936.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146] gi|269140551|ref|YP_003297252.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202] gi|259494675|sp|C5BF29|RS13_EDWI9 RecName: Full=30S ribosomal protein S13 gi|238870990|gb|ACR70701.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146] gi|267986212|gb|ACY86041.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202] gi|304560337|gb|ADM43001.1| SSU ribosomal protein S13p (S18e) [Edwardsiella tarda FL6-60] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICAAAGIAENVKISELSEEQIETLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVTLSIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|146329476|ref|YP_001210130.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A] gi|158706228|sp|A5EX97|RS13_DICNV RecName: Full=30S ribosomal protein S13 gi|146232946|gb|ABQ13924.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG +++IC K + P++++ L +SEV +RQ + Sbjct: 1 MARIAGINVPTQKHAVIALTSIYGIGTSRAKEICAKANVAPDKKIRDLSDSEVEALRQVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + YQVEGDLRR V+M+IKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK + Sbjct: 61 SE-YQVEGDLRRQVSMDIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRKGPRRPI 116 >gi|194466929|ref|ZP_03072916.1| ribosomal protein S13 [Lactobacillus reuteri 100-23] gi|194453965|gb|EDX42862.1| ribosomal protein S13 [Lactobacillus reuteri 100-23] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|329956726|ref|ZP_08297299.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056] gi|328524098|gb|EGF51174.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056] Length = 126 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|169823876|ref|YP_001691487.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328] gi|226712738|sp|B0RZT3|RS13_FINM2 RecName: Full=30S ribosomal protein S13 gi|167830681|dbj|BAG07597.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328] Length = 116 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KRV L I+GIG +SS I KL I P+ RV L ESE+ IR + Sbjct: 1 MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +Y EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T NARTRK K Sbjct: 61 D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPRK 114 >gi|116873974|ref|YP_850755.1| 30S ribosomal protein S13 [Listeria welshimeri serovar 6b str. SLCC5334] gi|123464194|sp|A0ALU4|RS13_LISW6 RecName: Full=30S ribosomal protein S13 gi|116742852|emb|CAK21976.1| ribosomal protein S13 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ ++ + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASEVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|293375414|ref|ZP_06621695.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909] gi|325844404|ref|ZP_08168131.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1] gi|292645967|gb|EFF63996.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909] gi|325489078|gb|EGC91462.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1] Length = 121 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG ++Q I + + RV L E E+ +IR + Sbjct: 1 MARIAGIDIPRDKRVVISLTYIYGIGKPTAQQILAAAGVSEDTRVRDLTEDELNRIRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRLM++ +RG+RHRR LPVRGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREISLNIKRLMEIASFRGVRHRRSLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|197104718|ref|YP_002130095.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1] gi|196478138|gb|ACG77666.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1] Length = 129 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 81/121 (66%), Positives = 95/121 (78%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP KRVV AL YIHGIG +++I NK+ I RRV+QL + EV+QIR+ I+ Sbjct: 9 ARIAGVNIPTNKRVVIALQYIHGIGAAKAREIVNKVGIEDARRVNQLTDQEVLQIRETID 68 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +DY VEGDLRR A+NIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK K +K Sbjct: 69 RDYMVEGDLRRDTAVNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 128 Query: 122 R 122 + Sbjct: 129 K 129 >gi|290477171|ref|YP_003470086.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004] gi|289176519|emb|CBJ83328.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004] Length = 118 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQQICEAACIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|116327248|ref|YP_796968.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116327288|ref|YP_797008.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116332098|ref|YP_801816.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280172|sp|Q04PW2|RS13_LEPBJ RecName: Full=30S ribosomal protein S13 gi|122284905|sp|Q055C0|RS13_LEPBL RecName: Full=30S ribosomal protein S13 gi|116119992|gb|ABJ78035.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116120032|gb|ABJ78075.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125787|gb|ABJ77058.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 125 Score = 170 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+A+ Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSRVILKKAGIDESIRVKDLNESQEAAIRKAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK K + Sbjct: 61 EESAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|238025955|ref|YP_002910186.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1] gi|237875149|gb|ACR27482.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVDFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|124514419|gb|EAY55932.1| ribosomal protein S13 [Leptospirillum rubarum] Length = 124 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 68/110 (61%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KRV AL YI+GIG +S I I P RRV L + EV +R+ I Sbjct: 1 MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEVASLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+ Y VEGDLRR V NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR Sbjct: 61 EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110 >gi|309812450|ref|ZP_07706205.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185] gi|308433755|gb|EFP57632.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185] Length = 124 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV L YI G+G +Q+ + P+ RV L E E++++R + Sbjct: 1 MARLIGVDLPREKRVEVGLTYIFGVGRTRAQETLAATGVNPDTRVRDLTEEELVKLRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++EGDLRR +A +I+R +++G Y GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 EASFRLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|16801818|ref|NP_472086.1| 30S ribosomal protein S13 [Listeria innocua Clip11262] gi|16804646|ref|NP_466131.1| 30S ribosomal protein S13 [Listeria monocytogenes EGD-e] gi|46908780|ref|YP_015169.1| 30S ribosomal protein S13 [Listeria monocytogenes str. 4b F2365] gi|47093974|ref|ZP_00231708.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858] gi|47097179|ref|ZP_00234744.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854] gi|217966193|ref|YP_002351871.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23] gi|224499281|ref|ZP_03667630.1| 30S ribosomal protein S13 [Listeria monocytogenes Finland 1988] gi|224503598|ref|ZP_03671905.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL R2-561] gi|226225154|ref|YP_002759261.1| ribosomal protein S13 [Listeria monocytogenes Clip81459] gi|254825031|ref|ZP_05230032.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194] gi|254829057|ref|ZP_05233744.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165] gi|254830961|ref|ZP_05235616.1| 30S ribosomal protein S13 [Listeria monocytogenes 10403S] gi|254854187|ref|ZP_05243535.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503] gi|254899941|ref|ZP_05259865.1| 30S ribosomal protein S13 [Listeria monocytogenes J0161] gi|254912853|ref|ZP_05262865.1| ribosomal protein S13 [Listeria monocytogenes J2818] gi|254931122|ref|ZP_05264481.1| ribosomal protein S13 [Listeria monocytogenes HPB2262] gi|254937233|ref|ZP_05268930.1| ribosomal protein S13 [Listeria monocytogenes F6900] gi|254992728|ref|ZP_05274918.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-064] gi|255027533|ref|ZP_05299519.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-003] gi|255028409|ref|ZP_05300360.1| 30S ribosomal protein S13 [Listeria monocytogenes LO28] gi|255520567|ref|ZP_05387804.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-175] gi|284800506|ref|YP_003412371.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578] gi|284993692|ref|YP_003415460.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923] gi|290891793|ref|ZP_06554790.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071] gi|300763641|ref|ZP_07073639.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017] gi|315283815|ref|ZP_07871884.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120] gi|54039349|sp|P66384|RS13_LISIN RecName: Full=30S ribosomal protein S13 gi|54042121|sp|P66383|RS13_LISMO RecName: Full=30S ribosomal protein S13 gi|67461446|sp|Q71WH0|RS13_LISMF RecName: Full=30S ribosomal protein S13 gi|254811152|sp|B8DB32|RS13_LISMH RecName: Full=30S ribosomal protein S13 gi|259494684|sp|C1KZF7|RS13_LISMC RecName: Full=30S ribosomal protein S13 gi|16412096|emb|CAD00686.1| ribosomal protein S13 [Listeria monocytogenes EGD-e] gi|16415293|emb|CAC97983.1| ribosomal protein S13 [Listeria innocua Clip11262] gi|46882053|gb|AAT05346.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. F2365] gi|47014438|gb|EAL05406.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854] gi|47017635|gb|EAL08434.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858] gi|217335463|gb|ACK41257.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23] gi|225877616|emb|CAS06330.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258601466|gb|EEW14791.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165] gi|258607579|gb|EEW20187.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503] gi|258609838|gb|EEW22446.1| ribosomal protein S13 [Listeria monocytogenes F6900] gi|284056068|gb|ADB67009.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578] gi|284059159|gb|ADB70098.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923] gi|290558387|gb|EFD91904.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071] gi|293582670|gb|EFF94702.1| ribosomal protein S13 [Listeria monocytogenes HPB2262] gi|293590851|gb|EFF99185.1| ribosomal protein S13 [Listeria monocytogenes J2818] gi|293594273|gb|EFG02034.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194] gi|300515918|gb|EFK42967.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017] gi|307572197|emb|CAR85376.1| rpsM [Listeria monocytogenes L99] gi|313606575|gb|EFR83376.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-208] gi|313612542|gb|EFR86615.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120] gi|313616944|gb|EFR89579.1| 30S ribosomal protein S13 [Listeria innocua FSL S4-378] gi|313622248|gb|EFR92761.1| 30S ribosomal protein S13 [Listeria innocua FSL J1-023] gi|328468092|gb|EGF39098.1| 30S ribosomal protein S13 [Listeria monocytogenes 1816] gi|328469780|gb|EGF40697.1| 30S ribosomal protein S13 [Listeria monocytogenes 220] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG ++++++ + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261880858|ref|ZP_06007285.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361] gi|270332365|gb|EFA43151.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361] Length = 126 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 84/123 (68%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V++ + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWSDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +++VEGDLR V M+IKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEFKVEGDLRSEVQMSIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|259502554|ref|ZP_05745456.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041] gi|259169506|gb|EEW54001.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVVGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|188996214|ref|YP_001930465.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931281|gb|ACD65911.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1] Length = 116 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 66/115 (57%), Positives = 86/115 (74%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG +++I K I +RV +L E+ IR+ I Sbjct: 1 MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRRFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 EQ+Y+VEGDLRR V++ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+ K Sbjct: 61 EQNYKVEGDLRREVSLAIKRLVDMGCYRGIRHRLGLPVRGQRTKTNAKTRRGKRK 115 >gi|297537553|ref|YP_003673322.1| 30S ribosomal protein S13 [Methylotenera sp. 301] gi|297256900|gb|ADI28745.1| 30S ribosomal protein S13 [Methylotenera sp. 301] Length = 120 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I GIG ++Q IC + ++ L +++V ++R + Sbjct: 1 MARIAGVNIPNNKHADVALTAIFGIGRVTAQKICAAAGVLATTKMKDLNDADVDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK K Sbjct: 61 AKE-KVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPVKAIKQA 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|322374069|ref|ZP_08048603.1| 30S ribosomal protein S13 [Streptococcus sp. C150] gi|321277035|gb|EFX54106.1| 30S ribosomal protein S13 [Streptococcus sp. C150] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLTTSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|323340397|ref|ZP_08080654.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644] gi|323092173|gb|EFZ34788.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG +++ I + + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGDTTAKKILAEAGVSEDVRVRDLTSDQEDKIRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y+VEGDLRR V++NIKRL ++G YRGLRHRR LP RGQ T NART K + Sbjct: 61 D-NYKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPSRGQNTKNNARTCKGPKVTIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|313206372|ref|YP_004045549.1| SSU ribosomal protein s13p [Riemerella anatipestifer DSM 15868] gi|312445688|gb|ADQ82043.1| SSU ribosomal protein S13P [Riemerella anatipestifer DSM 15868] gi|315023687|gb|EFT36691.1| SSU ribosomal protein S13p (S18e) [Riemerella anatipestifer RA-YM] gi|325336182|gb|ADZ12456.1| Ribosomal protein S13 [Riemerella anatipestifer RA-GD] Length = 125 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI+GIG ++ +I I +++V++ + E+ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIYGIGKSTASEILKNAGISEDKKVNEWNDDELAAIRNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SENIKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|160888375|ref|ZP_02069378.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492] gi|167764349|ref|ZP_02436474.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC 43183] gi|218131303|ref|ZP_03460107.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697] gi|270294728|ref|ZP_06200929.1| 30S ribosomal protein S13 [Bacteroides sp. D20] gi|317476333|ref|ZP_07935582.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA] gi|317477728|ref|ZP_07936921.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36] gi|156862052|gb|EDO55483.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492] gi|167697754|gb|EDS14333.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC 43183] gi|217986520|gb|EEC52856.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697] gi|270273975|gb|EFA19836.1| 30S ribosomal protein S13 [Bacteroides sp. D20] gi|316906073|gb|EFV27834.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36] gi|316907359|gb|EFV29064.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA] Length = 126 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|309799082|ref|ZP_07693335.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302] gi|308117317|gb|EFO54740.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGISEDVRVRDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|145588264|ref|YP_001154861.1| 30S ribosomal protein S13 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189044286|sp|A4SUY3|RS13_POLSQ RecName: Full=30S ribosomal protein S13 gi|145046670|gb|ABP33297.1| SSU ribosomal protein S13P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I GIG + IC + +++V L ++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIFGIGTTRANKICQTTGVAIDKKVKDLTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V M+IKRLMDLGCYRG+RHR+GLPVRGQRT TNARTRK K GV Sbjct: 61 GK-FITEGDLRREVTMSIKRLMDLGCYRGVRHRKGLPVRGQRTKTNARTRKGPRKSGVQL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15674311|ref|NP_268484.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS] gi|19745265|ref|NP_606401.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232] gi|21909600|ref|NP_663868.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315] gi|28894978|ref|NP_801328.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1] gi|50913463|ref|YP_059435.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10394] gi|71902733|ref|YP_279536.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS6180] gi|71909882|ref|YP_281432.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS5005] gi|94987699|ref|YP_595800.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS9429] gi|94989580|ref|YP_597680.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10270] gi|94991568|ref|YP_599667.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS2096] gi|94993468|ref|YP_601566.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10750] gi|139472951|ref|YP_001127666.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo] gi|209558651|ref|YP_002285123.1| 30S ribosomal protein S13 [Streptococcus pyogenes NZ131] gi|306828237|ref|ZP_07461497.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782] gi|54039355|sp|P66395|RS13_STRP3 RecName: Full=30S ribosomal protein S13 gi|54039356|sp|P66396|RS13_STRP8 RecName: Full=30S ribosomal protein S13 gi|54042126|sp|P66394|RS13_STRP1 RecName: Full=30S ribosomal protein S13 gi|73917915|sp|Q5XEB1|RS13_STRP6 RecName: Full=30S ribosomal protein S13 gi|91207628|sp|Q48VS5|RS13_STRPM RecName: Full=30S ribosomal protein S13 gi|158706280|sp|Q1JE35|RS13_STRPB RecName: Full=30S ribosomal protein S13 gi|158706281|sp|Q1JNZ3|RS13_STRPC RecName: Full=30S ribosomal protein S13 gi|158706282|sp|Q1JJ37|RS13_STRPD RecName: Full=30S ribosomal protein S13 gi|158706283|sp|Q1J8Y9|RS13_STRPF RecName: Full=30S ribosomal protein S13 gi|158706284|sp|A2RC38|RS13_STRPG RecName: Full=30S ribosomal protein S13 gi|226712793|sp|B5XJ60|RS13_STRPZ RecName: Full=30S ribosomal protein S13 gi|13621392|gb|AAK33206.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS] gi|19747360|gb|AAL96900.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232] gi|21903781|gb|AAM78671.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315] gi|28810223|dbj|BAC63161.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1] gi|50902537|gb|AAT86252.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10394] gi|71801828|gb|AAX71181.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS6180] gi|71852664|gb|AAZ50687.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS5005] gi|94541207|gb|ABF31256.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS9429] gi|94543088|gb|ABF33136.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10270] gi|94545076|gb|ABF35123.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS2096] gi|94546976|gb|ABF37022.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10750] gi|134271197|emb|CAM29410.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo] gi|209539852|gb|ACI60428.1| SSU ribosomal protein S13p (S18e) [Streptococcus pyogenes NZ131] gi|304429548|gb|EFM32597.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|329962290|ref|ZP_08300296.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057] gi|328530398|gb|EGF57275.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057] Length = 126 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILEKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|222152289|ref|YP_002561464.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J] gi|254811169|sp|B9DSX4|RS13_STRU0 RecName: Full=30S ribosomal protein S13 gi|222113100|emb|CAR40482.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J] Length = 121 Score = 170 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKATAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|170748612|ref|YP_001754872.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831] gi|226712762|sp|B1LWQ2|RS13_METRJ RecName: Full=30S ribosomal protein S13 gi|170655134|gb|ACB24189.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831] Length = 122 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 84/122 (68%), Positives = 99/122 (81%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVV AL YIHGIG K +++I K+ IP ERRV+QL ++EV+QIR+ I Sbjct: 1 MARIAGVNIPTNKRVVIALQYIHGIGAKKAEEITQKVNIPAERRVNQLTDAEVLQIRETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR V+MNIKRLMDLG YRGLRHR+ LPVRGQRTHTNARTRK K + Sbjct: 61 DRDYLVEGDLRREVSMNIKRLMDLGAYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|148544672|ref|YP_001272042.1| 30S ribosomal protein S13 [Lactobacillus reuteri DSM 20016] gi|184154025|ref|YP_001842366.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112] gi|227363795|ref|ZP_03847902.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3] gi|325683006|ref|ZP_08162522.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A] gi|166991600|sp|A5VLI1|RS13_LACRD RecName: Full=30S ribosomal protein S13 gi|226712753|sp|B2G8V4|RS13_LACRJ RecName: Full=30S ribosomal protein S13 gi|148531706|gb|ABQ83705.1| SSU ribosomal protein S13P [Lactobacillus reuteri DSM 20016] gi|183225369|dbj|BAG25886.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112] gi|227071152|gb|EEI09468.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3] gi|324977356|gb|EGC14307.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A] Length = 121 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 [Enterococcus faecalis V583] gi|227520016|ref|ZP_03950065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104] gi|227555877|ref|ZP_03985924.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22] gi|229546940|ref|ZP_04435665.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322] gi|229550529|ref|ZP_04439254.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200] gi|255971733|ref|ZP_05422319.1| ribosomal protein S13 [Enterococcus faecalis T1] gi|255974733|ref|ZP_05425319.1| ribosomal protein S13 [Enterococcus faecalis T2] gi|256618356|ref|ZP_05475202.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200] gi|256762028|ref|ZP_05502608.1| ribosomal protein S13 [Enterococcus faecalis T3] gi|256855187|ref|ZP_05560548.1| ribosomal protein S13 [Enterococcus faecalis T8] gi|256956838|ref|ZP_05561009.1| ribosomal protein S13 [Enterococcus faecalis DS5] gi|256960645|ref|ZP_05564816.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96] gi|256964156|ref|ZP_05568327.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704] gi|257078508|ref|ZP_05572869.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1] gi|257081521|ref|ZP_05575882.1| ribosomal protein S13 [Enterococcus faecalis E1Sol] gi|257084169|ref|ZP_05578530.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1] gi|257087996|ref|ZP_05582357.1| ribosomal protein S13 [Enterococcus faecalis D6] gi|257088673|ref|ZP_05583034.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188] gi|257417599|ref|ZP_05594593.1| ribosomal protein S13 [Enterococcus faecalis AR01/DG] gi|257418675|ref|ZP_05595669.1| 30S ribosomal protein S13 [Enterococcus faecalis T11] gi|257421523|ref|ZP_05598513.1| 30S ribosomal protein S13 [Enterococcus faecalis X98] gi|293382734|ref|ZP_06628659.1| 30S ribosomal protein S13 [Enterococcus faecalis R712] gi|293388083|ref|ZP_06632611.1| 30S ribosomal protein S13 [Enterococcus faecalis S613] gi|294781075|ref|ZP_06746426.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1] gi|300862068|ref|ZP_07108148.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11] gi|307269111|ref|ZP_07550472.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248] gi|307274195|ref|ZP_07555403.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855] gi|307276420|ref|ZP_07557543.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134] gi|307278630|ref|ZP_07559700.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860] gi|307286990|ref|ZP_07567065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109] gi|307291669|ref|ZP_07571544.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411] gi|312901098|ref|ZP_07760386.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470] gi|312904660|ref|ZP_07763815.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635] gi|312908629|ref|ZP_07767571.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512] gi|312909223|ref|ZP_07768080.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516] gi|312952631|ref|ZP_07771495.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102] gi|32363226|sp|P59754|RS13_ENTFA RecName: Full=30S ribosomal protein S13 gi|29342333|gb|AAO80099.1| ribosomal protein S13 [Enterococcus faecalis V583] gi|227072564|gb|EEI10527.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104] gi|227175044|gb|EEI56016.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22] gi|229304248|gb|EEN70244.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200] gi|229307868|gb|EEN73855.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322] gi|255962751|gb|EET95227.1| ribosomal protein S13 [Enterococcus faecalis T1] gi|255967605|gb|EET98227.1| ribosomal protein S13 [Enterococcus faecalis T2] gi|256597883|gb|EEU17059.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200] gi|256683279|gb|EEU22974.1| ribosomal protein S13 [Enterococcus faecalis T3] gi|256709700|gb|EEU24747.1| ribosomal protein S13 [Enterococcus faecalis T8] gi|256947334|gb|EEU63966.1| ribosomal protein S13 [Enterococcus faecalis DS5] gi|256951141|gb|EEU67773.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96] gi|256954652|gb|EEU71284.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704] gi|256986538|gb|EEU73840.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1] gi|256989551|gb|EEU76853.1| ribosomal protein S13 [Enterococcus faecalis E1Sol] gi|256992199|gb|EEU79501.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1] gi|256996026|gb|EEU83328.1| ribosomal protein S13 [Enterococcus faecalis D6] gi|256997485|gb|EEU84005.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188] gi|257159427|gb|EEU89387.1| ribosomal protein S13 [Enterococcus faecalis ARO1/DG] gi|257160503|gb|EEU90463.1| 30S ribosomal protein S13 [Enterococcus faecalis T11] gi|257163347|gb|EEU93307.1| 30S ribosomal protein S13 [Enterococcus faecalis X98] gi|291079894|gb|EFE17258.1| 30S ribosomal protein S13 [Enterococcus faecalis R712] gi|291082534|gb|EFE19497.1| 30S ribosomal protein S13 [Enterococcus faecalis S613] gi|294451878|gb|EFG20329.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1] gi|295112522|emb|CBL31159.1| SSU ribosomal protein S13P [Enterococcus sp. 7L76] gi|300848593|gb|EFK76350.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11] gi|306497288|gb|EFM66830.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411] gi|306501936|gb|EFM71225.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109] gi|306504690|gb|EFM73890.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860] gi|306506900|gb|EFM76047.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134] gi|306509157|gb|EFM78219.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855] gi|306514591|gb|EFM83145.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248] gi|310625416|gb|EFQ08699.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512] gi|310629419|gb|EFQ12702.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102] gi|310632012|gb|EFQ15295.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635] gi|311290465|gb|EFQ69021.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516] gi|311291770|gb|EFQ70326.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470] gi|315026811|gb|EFT38743.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2137] gi|315028852|gb|EFT40784.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4000] gi|315031163|gb|EFT43095.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0017] gi|315035991|gb|EFT47923.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0027] gi|315147147|gb|EFT91163.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4244] gi|315151095|gb|EFT95111.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0012] gi|315153585|gb|EFT97601.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0031] gi|315156235|gb|EFU00252.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0043] gi|315158620|gb|EFU02637.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0312] gi|315160751|gb|EFU04768.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0645] gi|315165878|gb|EFU09895.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1302] gi|315168124|gb|EFU12141.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1341] gi|315171436|gb|EFU15453.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1342] gi|315172670|gb|EFU16687.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1346] gi|315573538|gb|EFU85729.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309B] gi|315579350|gb|EFU91541.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0630] gi|315582114|gb|EFU94305.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309A] gi|323479446|gb|ADX78885.1| 30S ribosomal protein S13 [Enterococcus faecalis 62] gi|327534028|gb|AEA92862.1| 30S ribosomal protein S13 [Enterococcus faecalis OG1RF] gi|329577725|gb|EGG59151.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1467] Length = 121 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG +++ + + + + RV L + IR I Sbjct: 1 MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRKGPTKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|256825861|ref|YP_003149821.1| 30S ribosomal protein S13P [Kytococcus sedentarius DSM 20547] gi|256689254|gb|ACV07056.1| SSU ribosomal protein S13P [Kytococcus sedentarius DSM 20547] Length = 123 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV L YI G+G + I RV L + +++ +R + Sbjct: 1 MARLIGVDLPRDKRVEIGLTYIFGVGRTRALQAVEACGIDRSTRVKDLNDEQLVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E ++Q+EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 EGNFQLEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVSGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|212695282|ref|ZP_03303410.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855] gi|237711698|ref|ZP_04542179.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA] gi|237725861|ref|ZP_04556342.1| 30S ribosomal protein S13 [Bacteroides sp. D4] gi|265753117|ref|ZP_06088686.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA] gi|212662192|gb|EEB22766.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855] gi|229435669|gb|EEO45746.1| 30S ribosomal protein S13 [Bacteroides dorei 5_1_36/D4] gi|229454393|gb|EEO60114.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA] gi|263236303|gb|EEZ21798.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA] Length = 126 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAARIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|311744781|ref|ZP_07718577.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272] gi|311311898|gb|EFQ81819.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272] Length = 122 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL Y+ GIG + + I P RVH L +S+++ +R I Sbjct: 1 MARLVGVDLPREKRIEIALTYVFGIGRTRATETLAATGIDPHTRVHALDDSQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E YQVEGDLRR V +I+R M++G Y+G RHR LPVRGQRT TNARTRK + + Sbjct: 61 EAHYQVEGDLRREVTADIRRKMEIGSYQGRRHRAHLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|224827039|ref|ZP_03700136.1| ribosomal protein S13 [Lutiella nitroferrum 2002] gi|224600705|gb|EEG06891.1| ribosomal protein S13 [Lutiella nitroferrum 2002] Length = 120 Score = 170 bits (432), Expect = 5e-41, Method: Composition-based stats. Identities = 62/121 (51%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP V L I+GIG +Q IC + +V L ++E+ ++R+ + Sbjct: 1 MARIAGVNIPNHAHAVIGLQAIYGIGQTRAQQICAAAGVVTSTKVKDLTDAEMDKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR + M+IKRLMD+G YRG+RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-FTVEGDLRREITMSIKRLMDMGSYRGMRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|255530538|ref|YP_003090910.1| 30S ribosomal protein S13 [Pedobacter heparinus DSM 2366] gi|255343522|gb|ACU02848.1| ribosomal protein S13 [Pedobacter heparinus DSM 2366] Length = 125 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++PR KR L YI G+G ++Q I + I ++V + E+ IR I Sbjct: 1 MARISGIDLPRNKRGEIGLTYIFGVGRATAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT N+RTRK K + Sbjct: 61 NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296875381|ref|ZP_06899455.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912] gi|312867026|ref|ZP_07727237.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405] gi|319945812|ref|ZP_08020062.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641] gi|322390683|ref|ZP_08064197.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903] gi|296433574|gb|EFH19347.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912] gi|311097508|gb|EFQ55741.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405] gi|319747877|gb|EFW00121.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641] gi|321142656|gb|EFX38120.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903] Length = 121 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGVSEDIRVRDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|254779838|ref|YP_003057944.1| 30S ribosomal protein S13 [Helicobacter pylori B38] gi|254001750|emb|CAX29981.1| 30S ribosomal subunit protein S13 [Helicobacter pylori B38] gi|317178413|dbj|BAJ56201.1| 30S ribosomal protein S13 [Helicobacter pylori F30] Length = 120 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + + ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|292492443|ref|YP_003527882.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4] gi|291581038|gb|ADE15495.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4] Length = 118 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/115 (56%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G ++ IC + +++V L +SE+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALTSIYGVGPTRAKKICEAAGVASDKKVKDLSDSELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK + Sbjct: 61 AK-YPVEGDLRREISMDIKRLMDLGCYRGLRHRRGLPVRGQRTQTNARTRKGPRR 114 >gi|32266899|ref|NP_860931.1| 30S ribosomal protein S13 [Helicobacter hepaticus ATCC 51449] gi|81665564|sp|Q7VGC2|RS13_HELHP RecName: Full=30S ribosomal protein S13 gi|32262951|gb|AAP77997.1| ribosomal protein S13 [Helicobacter hepaticus ATCC 51449] Length = 120 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 71/120 (59%), Positives = 86/120 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSSQDI + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSQDILKAVNISFDKRVSDLSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QESYMVEGDLRKKVTMDIKSLMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|24213462|ref|NP_710943.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str. 56601] gi|45658679|ref|YP_002765.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|26454666|sp|Q9XD12|RS13_LEPIN RecName: Full=30S ribosomal protein S13 gi|73917913|sp|Q72NI5|RS13_LEPIC RecName: Full=30S ribosomal protein S13 gi|24194234|gb|AAN47961.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str. 56601] gi|45601923|gb|AAS71402.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 125 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+ + Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK K + Sbjct: 61 EETAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|134096299|ref|YP_001101374.1| 30S ribosomal protein S13 [Herminiimonas arsenicoxydans] gi|158706238|sp|A4G9R6|RS13_HERAR RecName: Full=30S ribosomal protein S13 gi|133740202|emb|CAL63253.1| 30S ribosomal subunit protein S13 [Herminiimonas arsenicoxydans] Length = 121 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P + V L I+GIG +Q IC+ + ++V L +SE+ ++R I Sbjct: 1 MARIAGVNVPNHQHTVIGLTAIYGIGRPRAQKICDATGVLTTKKVKDLDDSELEKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK K + Sbjct: 61 AK-FIVEGDLRREISMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|329116762|ref|ZP_08245479.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020] gi|326907167|gb|EGE54081.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020] Length = 121 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y+ GIG +SQ I I + RV L + IR+ I Sbjct: 1 MARIAGVDIPNDKRVVISLTYVFGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKPTAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|320548031|ref|ZP_08042311.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812] gi|320447273|gb|EFW88036.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812] Length = 121 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116490681|ref|YP_810225.1| 30S ribosomal protein S13 [Oenococcus oeni PSU-1] gi|118586178|ref|ZP_01543652.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163] gi|290890096|ref|ZP_06553179.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429] gi|122277135|sp|Q04G62|RS13_OENOB RecName: Full=30S ribosomal protein S13 gi|116091406|gb|ABJ56560.1| SSU ribosomal protein S13P [Oenococcus oeni PSU-1] gi|118433386|gb|EAV40078.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163] gi|290480287|gb|EFD88928.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429] Length = 123 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG +++ + + + + RV L + ++R A+ Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAEKVLAEAGVSEDVRVRDLSPEDEDKVRAAV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + +EGDLRR V++NIK L ++ YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DKLNLTLEGDLRREVSLNIKGLQEIASYRGIRHRRGLPVRGQHTKNNARTRKGPARAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|297569398|ref|YP_003690742.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2] gi|296925313|gb|ADH86123.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2] Length = 122 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 90/122 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ K + AL YI+GIG S++ I + +P +R +L ++EV ++R+ I Sbjct: 1 MARIAGVDIPKNKHMEVALTYIYGIGRPSARRILDLAKLPYDRNSDELTDNEVAEVRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY VEGD RR V M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK + V Sbjct: 61 EEDYVVEGDRRREVGMDIKRLMDLGCYRGLRHRKGLPCRGQRTSTNARTRKGPRRAAVKT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|29348113|ref|NP_811616.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482] gi|153805980|ref|ZP_01958648.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185] gi|160883041|ref|ZP_02064044.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483] gi|237717423|ref|ZP_04547904.1| 30S ribosomal protein S13 [Bacteroides sp. D1] gi|237718719|ref|ZP_04549200.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4] gi|253569615|ref|ZP_04847025.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6] gi|255690027|ref|ZP_05413702.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565] gi|260175440|ref|ZP_05761852.1| 30S ribosomal protein S13 [Bacteroides sp. D2] gi|262406188|ref|ZP_06082738.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22] gi|293372096|ref|ZP_06618487.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f] gi|294644081|ref|ZP_06721858.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a] gi|294806541|ref|ZP_06765380.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b] gi|298386203|ref|ZP_06995760.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14] gi|298483088|ref|ZP_07001269.1| 30S ribosomal protein S13 [Bacteroides sp. D22] gi|299144600|ref|ZP_07037668.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23] gi|315923669|ref|ZP_07919909.1| 30S ribosomal protein S13 [Bacteroides sp. D2] gi|32363309|sp|Q8A499|RS13_BACTN RecName: Full=30S ribosomal protein S13 gi|29340016|gb|AAO77810.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482] gi|149130657|gb|EDM21863.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185] gi|156111513|gb|EDO13258.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483] gi|229443406|gb|EEO49197.1| 30S ribosomal protein S13 [Bacteroides sp. D1] gi|229451851|gb|EEO57642.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4] gi|251841634|gb|EES69715.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6] gi|260624634|gb|EEX47505.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565] gi|262357063|gb|EEZ06153.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22] gi|292632888|gb|EFF51475.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f] gi|292640605|gb|EFF58846.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a] gi|294446236|gb|EFG14864.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b] gi|295085405|emb|CBK66928.1| SSU ribosomal protein S13P [Bacteroides xylanisolvens XB1A] gi|298261431|gb|EFI04298.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14] gi|298270832|gb|EFI12412.1| 30S ribosomal protein S13 [Bacteroides sp. D22] gi|298515091|gb|EFI38972.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23] gi|313697544|gb|EFS34379.1| 30S ribosomal protein S13 [Bacteroides sp. D2] Length = 126 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|221126765|ref|XP_002165015.1| PREDICTED: similar to 30S ribosomal protein S13 [Hydra magnipapillata] gi|260222206|emb|CBA31537.1| 30S ribosomal protein S13 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 121 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I ++V L +S++ +IR I Sbjct: 1 MARIAGINIPPHQHSEIGLTAIFGIGRTRARKICEACGIAYSKKVKDLTDSDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|239787585|emb|CAX84053.1| 30S ribosomal protein S13 [uncultured bacterium] Length = 120 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 74/120 (61%), Positives = 85/120 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KR+ AL YI GIG + S+ I + + E R L E+E +IR I Sbjct: 1 MARIAGVNIPINKRMEVALTYIFGIGPERSKKILKEAGVSTEVRARDLSEAETARIRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEGDLRR VAMN KRLMDLG YRGLRHRRGLP RGQRTHTNARTRK + V + Sbjct: 61 DKDYVVEGDLRRQVAMNTKRLMDLGTYRGLRHRRGLPTRGQRTHTNARTRKGPRRAVVGK 120 >gi|149376662|ref|ZP_01894421.1| 30S ribosomal protein S13 [Marinobacter algicola DG893] gi|149359035|gb|EDM47500.1| 30S ribosomal protein S13 [Marinobacter algicola DG893] Length = 118 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHAVISLTYIFGVGKTAAQKLCDATGVKPDVKVKDLSDEQLESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK K Sbjct: 61 GK-LAVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116 >gi|15645909|ref|NP_208088.1| 30S ribosomal protein S13 [Helicobacter pylori 26695] gi|108563666|ref|YP_627982.1| 30S ribosomal protein S13 [Helicobacter pylori HPAG1] gi|188528084|ref|YP_001910771.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470] gi|207108654|ref|ZP_03242816.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_CA4C1] gi|208435194|ref|YP_002266860.1| ribosomal protein S13 [Helicobacter pylori G27] gi|210135455|ref|YP_002301894.1| 30S ribosomal protein S13 [Helicobacter pylori P12] gi|217032050|ref|ZP_03437550.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128] gi|217033615|ref|ZP_03439043.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10] gi|298735679|ref|YP_003728204.1| 30S ribosomal protein S13 [Helicobacter pylori B8] gi|308183406|ref|YP_003927533.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4] gi|308185048|ref|YP_003929181.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180] gi|2500456|sp|P56020|RS13_HELPY RecName: Full=30S ribosomal protein S13 gi|123373689|sp|Q1CRW4|RS13_HELPH RecName: Full=30S ribosomal protein S13 gi|226712744|sp|B6JND6|RS13_HELP2 RecName: Full=30S ribosomal protein S13 gi|226712745|sp|B5Z8U5|RS13_HELPG RecName: Full=30S ribosomal protein S13 gi|226712746|sp|B2UV59|RS13_HELPS RecName: Full=30S ribosomal protein S13 gi|2314462|gb|AAD08339.1| ribosomal protein S13 (rps13) [Helicobacter pylori 26695] gi|107837439|gb|ABF85308.1| ribosomal protein S13 [Helicobacter pylori HPAG1] gi|188144324|gb|ACD48741.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470] gi|208433123|gb|ACI27994.1| ribosomal protein S13 [Helicobacter pylori G27] gi|210133423|gb|ACJ08414.1| 30S ribosomal protein S13 [Helicobacter pylori P12] gi|216943961|gb|EEC23395.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10] gi|216946198|gb|EEC24806.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128] gi|261838615|gb|ACX98381.1| ribosomal protein S13 [Helicobacter pylori 51] gi|261840011|gb|ACX99776.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52] gi|297380478|gb|ADI35365.1| 30S ribosomal protein S13 [Helicobacter pylori v225d] gi|298354868|emb|CBI65740.1| small subunit ribosomal protein S13 [Helicobacter pylori B8] gi|308060968|gb|ADO02864.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180] gi|308062581|gb|ADO04469.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20] gi|308064073|gb|ADO05960.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464] gi|308065591|gb|ADO07483.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4] gi|317009979|gb|ADU80559.1| 30S ribosomal protein S13 [Helicobacter pylori India7] gi|317011496|gb|ADU85243.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7] gi|317014687|gb|ADU82123.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24] gi|317178035|dbj|BAJ55824.1| 30S ribosomal protein S13 [Helicobacter pylori F16] gi|317181018|dbj|BAJ58804.1| 30S ribosomal protein S13 [Helicobacter pylori F32] Length = 120 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|293390663|ref|ZP_06634997.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951197|gb|EFE01316.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D7S-1] Length = 118 Score = 170 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 SK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|149926589|ref|ZP_01914849.1| ribosomal protein S13 [Limnobacter sp. MED105] gi|149824518|gb|EDM83734.1| ribosomal protein S13 [Limnobacter sp. MED105] Length = 121 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + V L I GIG +++ IC +IP ++V L ++++ ++R + Sbjct: 1 MARIAGINIPSHQHTVIGLTAIFGIGRSTAKKICAVTSIPESKKVKDLDDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TN+RTRK + G+A Sbjct: 61 GK-YLTEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNSRTRKGPKRAGIAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|115350345|ref|YP_772184.1| 30S ribosomal protein S13 [Burkholderia ambifaria AMMD] gi|134294466|ref|YP_001118201.1| 30S ribosomal protein S13 [Burkholderia vietnamiensis G4] gi|170700717|ref|ZP_02891712.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10] gi|171318371|ref|ZP_02907529.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5] gi|172059364|ref|YP_001807016.1| 30S ribosomal protein S13 [Burkholderia ambifaria MC40-6] gi|122324243|sp|Q0BJ23|RS13_BURCM RecName: Full=30S ribosomal protein S13 gi|166231903|sp|A4JAR3|RS13_BURVG RecName: Full=30S ribosomal protein S13 gi|226712704|sp|B1YRQ2|RS13_BURA4 RecName: Full=30S ribosomal protein S13 gi|115280333|gb|ABI85850.1| SSU ribosomal protein S13P [Burkholderia ambifaria AMMD] gi|134137623|gb|ABO53366.1| SSU ribosomal protein S13P [Burkholderia vietnamiensis G4] gi|170134387|gb|EDT02720.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10] gi|171096449|gb|EDT41348.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5] gi|171991881|gb|ACB62800.1| ribosomal protein S13 [Burkholderia ambifaria MC40-6] Length = 121 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG S+ IC+ + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICSAAGVEFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FIVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|171778399|ref|ZP_02919578.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282930|gb|EDT48354.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 121 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|319955879|ref|YP_004167142.1| SSU ribosomal protein s13p [Nitratifractor salsuginis DSM 16511] gi|319418283|gb|ADV45393.1| SSU ribosomal protein S13P [Nitratifractor salsuginis DSM 16511] Length = 120 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 68/119 (57%), Positives = 88/119 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG SS+ I + I ++RV++L ++E IR+ I Sbjct: 1 MARIAGVDLPKNKRMEYALTYIYGIGLTSSRKILDATGISYDKRVYELTDAEAATIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHRRGLPVRGQ+T TNARTRK K + Sbjct: 61 QEHYMVEGDLRKKVMMDIKTLMDLGNYRGLRHRRGLPVRGQKTKTNARTRKGKRKTVGS 119 >gi|50955542|ref|YP_062830.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07] gi|81390583|sp|Q6AD19|RS13_LEIXX RecName: Full=30S ribosomal protein S13 gi|50952024|gb|AAT89725.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 124 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+G+G + + I E RV L + +++ +R I Sbjct: 1 MARLAGVDIPREKRVEVALTYIYGVGRTRALQTLRETEISGEIRVKDLTDEQLVSLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +++VEGDLRR VA +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK + + Sbjct: 61 EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|282860836|ref|ZP_06269902.1| ribosomal protein S13 [Streptomyces sp. ACTE] gi|282564572|gb|EFB70108.1| ribosomal protein S13 [Streptomyces sp. ACTE] Length = 126 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILATTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|270157889|ref|ZP_06186546.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968] gi|289163852|ref|YP_003453990.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150] gi|269989914|gb|EEZ96168.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968] gi|288857025|emb|CBJ10839.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150] Length = 118 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +V AL I+GIG +S +C+ + I P ++V +L ++++ +R I Sbjct: 1 MARIAGVNIPDHKHLVIALTAIYGIGKPTSIKLCSAVGIDPSKKVSELTDAQLESLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK KG Sbjct: 61 AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPVHGQRTKTNARTRKGRRKGTT 117 >gi|206602700|gb|EDZ39181.1| Ribosomal protein S13 [Leptospirillum sp. Group II '5-way CG'] Length = 124 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 67/110 (60%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KRV AL YI+GIG +S I I P RRV L + E+ +R+ I Sbjct: 1 MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEIASLRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+ Y VEGDLRR V NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR Sbjct: 61 EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110 >gi|241895165|ref|ZP_04782461.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313] gi|241871471|gb|EER75222.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313] Length = 121 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL Y++GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGVDLPRDKRIVIALTYVYGIGNSTAQKVLAEAKVSEDVRVRDLTPDQEDAIRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V+M+IK L ++ YRG+RHR+GLPVRGQ T NARTRK + Sbjct: 61 D-GIKVEGDLRREVSMSIKALQEINSYRGIRHRKGLPVRGQHTKNNARTRKGPAVSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|227543599|ref|ZP_03973648.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A] gi|300909372|ref|ZP_07126833.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112] gi|154705526|gb|ABS84189.1| ribosomal protein S13p [Lactobacillus reuteri] gi|227186439|gb|EEI66510.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A] gi|300893237|gb|EFK86596.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112] Length = 121 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG +++ I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVVGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 [Streptococcus suis 05ZYH33] gi|146319944|ref|YP_001199655.1| 30S ribosomal protein S13 [Streptococcus suis 98HAH33] gi|223933082|ref|ZP_03625075.1| ribosomal protein S13 [Streptococcus suis 89/1591] gi|253751013|ref|YP_003024154.1| 30S ribosomal protein S13 [Streptococcus suis SC84] gi|253752913|ref|YP_003026053.1| 30S ribosomal protein S13 [Streptococcus suis P1/7] gi|253754738|ref|YP_003027878.1| 30S ribosomal protein S13 [Streptococcus suis BM407] gi|330831944|ref|YP_004400769.1| 30S ribosomal protein S13 [Streptococcus suis ST3] gi|158706285|sp|A4VYR6|RS13_STRS2 RecName: Full=30S ribosomal protein S13 gi|158706287|sp|A4VSH6|RS13_STRSY RecName: Full=30S ribosomal protein S13 gi|145688559|gb|ABP89065.1| Ribosomal protein S13 [Streptococcus suis 05ZYH33] gi|145690750|gb|ABP91255.1| Ribosomal protein S13 [Streptococcus suis 98HAH33] gi|223898269|gb|EEF64637.1| ribosomal protein S13 [Streptococcus suis 89/1591] gi|251815302|emb|CAZ50870.1| 30S ribosomal protein S13 [Streptococcus suis SC84] gi|251817202|emb|CAZ54925.1| 30S ribosomal protein S13 [Streptococcus suis BM407] gi|251819158|emb|CAR44290.1| 30S ribosomal protein S13 [Streptococcus suis P1/7] gi|292557555|gb|ADE30556.1| ribosomal protein S13 [Streptococcus suis GZ1] gi|319757264|gb|ADV69206.1| 30S ribosomal protein S13 [Streptococcus suis JS14] gi|329306167|gb|AEB80583.1| 30S ribosomal protein S13 [Streptococcus suis ST3] Length = 121 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|126666791|ref|ZP_01737768.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17] gi|126628836|gb|EAZ99456.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17] Length = 118 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV +L YI G+G ++Q +C+ + P+ +V L + ++ +R + Sbjct: 1 MARIAGVNIPDHKHVVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLTDEQLESLRTDV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK K Sbjct: 61 IKG-SVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116 >gi|30918554|sp|P15757|RS13_BACST RecName: Full=30S ribosomal protein S13; AltName: Full=BS14 Length = 120 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 2/122 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+GIG ++ I + + + RV L E E+ +IR+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIYGIGKPTA-QILKEAGVSEDTRVRDLTEEELGRIREIV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T NARTRK + + Sbjct: 60 GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 118 Query: 121 KR 122 K+ Sbjct: 119 KK 120 >gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO] gi|166991604|sp|A8F4T6|RS13_THELT RecName: Full=30S ribosomal protein S13 gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO] Length = 128 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL Y++G+G + +I I P++RV L + EV +I + I Sbjct: 1 MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEG+LR + NIKRL+D+GCYRG RH+ GLPVRGQRT +NARTRK + Sbjct: 61 QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRKGPRPSRIKT 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|225552343|ref|ZP_03773283.1| ribosomal protein S13p/S18e [Borrelia sp. SV1] gi|225371341|gb|EEH00771.1| ribosomal protein S13p/S18e [Borrelia sp. SV1] Length = 125 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKVAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|302536276|ref|ZP_07288618.1| 30S ribosomal protein S13 [Streptomyces sp. C] gi|302445171|gb|EFL16987.1| 30S ribosomal protein S13 [Streptomyces sp. C] Length = 126 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IPR KRV AL Y+ GIG S++I + P RV L E ++++IR+ + Sbjct: 1 MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + + EGDLRR + +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK + + Sbjct: 61 DANLRTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|228470693|ref|ZP_04055544.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3] gi|228307550|gb|EEK16546.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3] Length = 126 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG S+ I + + +V + + IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQ 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I Y+VEGDLR +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK K Sbjct: 61 ISNGYKVEGDLRSEKQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKGKRKTVAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311] gi|55823797|ref|YP_142238.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066] gi|116628574|ref|YP_821193.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMD-9] gi|228478087|ref|ZP_04062698.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126] gi|312862416|ref|ZP_07722659.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396] gi|322515891|ref|ZP_08068833.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124] gi|81558873|sp|Q5LXT5|RS13_STRT1 RecName: Full=30S ribosomal protein S13 gi|81560060|sp|Q5M2D7|RS13_STRT2 RecName: Full=30S ribosomal protein S13 gi|122266832|sp|Q03IH5|RS13_STRTD RecName: Full=30S ribosomal protein S13 gi|55737866|gb|AAV61508.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311] gi|55739782|gb|AAV63423.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066] gi|116101851|gb|ABJ66997.1| SSU ribosomal protein S13P [Streptococcus thermophilus LMD-9] gi|228250267|gb|EEK09520.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126] gi|311102059|gb|EFQ60259.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396] gi|312279235|gb|ADQ63892.1| 30S ribosomal protein S13 [Streptococcus thermophilus ND03] gi|322125678|gb|EFX97005.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124] Length = 121 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|322388378|ref|ZP_08061981.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779] gi|322391222|ref|ZP_08064694.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780] gi|321140691|gb|EFX36193.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779] gi|321145975|gb|EFX41364.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780] Length = 121 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +SQ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGVSEDIRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|319900948|ref|YP_004160676.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108] gi|319415979|gb|ADV43090.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108] Length = 126 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|24380345|ref|NP_722300.1| 30S ribosomal protein S13 [Streptococcus mutans UA159] gi|290581266|ref|YP_003485658.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025] gi|315222795|ref|ZP_07864681.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211] gi|319940037|ref|ZP_08014391.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV] gi|32363320|sp|Q8DS35|RS13_STRMU RecName: Full=30S ribosomal protein S13 gi|24378363|gb|AAN59606.1|AE015023_7 30S ribosomal protein S13 [Streptococcus mutans UA159] gi|254998165|dbj|BAH88766.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025] gi|315188098|gb|EFU21827.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211] gi|319810751|gb|EFW07078.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV] Length = 121 Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|282882509|ref|ZP_06291130.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B] gi|300814677|ref|ZP_07094928.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281297651|gb|EFA90126.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B] gi|300511296|gb|EFK38545.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 120 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI GIG SQ I + + RV L E+E+ +IR I Sbjct: 1 MARIAGVDLPREKRVEIGLTYIFGIGRSRSQKILKDADVNFDTRVKDLTEAELGRIRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK K + Sbjct: 61 QK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKAGLPVRGQKTKTNARTRKGPKKLIAKK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|284042828|ref|YP_003393168.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684] gi|283947049|gb|ADB49793.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684] Length = 126 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 67/118 (56%), Positives = 82/118 (69%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP KRV L YI+GIG S ++ K+ I P+ V L E EV ++R I Sbjct: 1 MARIAGINIPLNKRVEIGLTYIYGIGRSRSNELLAKVGISPDTYVRDLTEDEVGKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + VEGDLRR + N+KRLM++GCYRGLRHRRGLPVRGQ+T TNARTRK + V Sbjct: 61 DS-LTVEGDLRRERSQNVKRLMEIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRMSV 117 >gi|291166854|gb|EFE28900.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896] Length = 121 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI GIG +S I I P+ R+ L E EV +R+AI Sbjct: 1 MARIAGIDLPREKRVEIGLTYIFGIGRPTSNKILKDTGINPDTRIKDLTEEEVNTLRKAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK + + Sbjct: 61 D-NYLVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRKGSKRTVGRK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|296130464|ref|YP_003637714.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109] gi|296022279|gb|ADG75515.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109] Length = 126 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KRV AL YI G+G + I P+ RV L +++++ +R + Sbjct: 1 MARLIGVDLPRDKRVEVALTYIFGVGRTRAHQALAATGISPDVRVKDLDDAQLVALRDFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++EGDLRR +A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DGSFKLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|282880977|ref|ZP_06289668.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1] gi|281305200|gb|EFA97269.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1] Length = 126 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRDLKVSEWTDDQAASIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|251781542|ref|YP_002995843.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390170|dbj|BAH80629.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|322410882|gb|EFY01790.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] gi|323126335|gb|ADX23632.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 121 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|221218102|ref|ZP_03589568.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a] gi|224532893|ref|ZP_03673505.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23] gi|224533622|ref|ZP_03674211.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a] gi|225548633|ref|ZP_03769680.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a] gi|225549635|ref|ZP_03770601.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a] gi|221192050|gb|EEE18271.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a] gi|224512169|gb|EEF82558.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23] gi|224513295|gb|EEF83657.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a] gi|225369912|gb|EEG99359.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a] gi|225370663|gb|EEH00099.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a] gi|312148169|gb|ADQ30828.1| ribosomal protein S13p/S18e [Borrelia burgdorferi JD1] Length = 125 Score = 169 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|113460230|ref|YP_718288.1| 30S ribosomal protein S13 [Haemophilus somnus 129PT] gi|123031100|sp|Q0I140|RS13_HAES1 RecName: Full=30S ribosomal protein S13 gi|112822273|gb|ABI24362.1| SSU ribosomal protein S13P [Haemophilus somnus 129PT] Length = 118 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|71065081|ref|YP_263808.1| 30S ribosomal protein S13 [Psychrobacter arcticus 273-4] gi|91207720|sp|Q4FUD4|RS13_PSYA2 RecName: Full=30S ribosomal protein S13 gi|71038066|gb|AAZ18374.1| SSU ribosomal protein S13P [Psychrobacter arcticus 273-4] Length = 118 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/116 (55%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q I + I P +V QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK + Sbjct: 61 SE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPTRP 115 >gi|121603257|ref|YP_980586.1| 30S ribosomal protein S13 [Polaromonas naphthalenivorans CJ2] gi|158706258|sp|A1VJ37|RS13_POLNA RecName: Full=30S ribosomal protein S13 gi|120592226|gb|ABM35665.1| SSU ribosomal protein S13P [Polaromonas naphthalenivorans CJ2] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L +S++ +IR I Sbjct: 1 MARIAGINIPPQKHAEIGLTAIFGIGRTRARKICEACEIDYAKKIKDLTDSDLEKIRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|322386330|ref|ZP_08059960.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100] gi|321269554|gb|EFX52484.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|299143169|ref|ZP_07036249.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517654|gb|EFI41393.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 120 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 2/122 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV L YI+GIG K SQ+I + + RV L ESE+ +IR I Sbjct: 1 MARIAGIDLPREKRVEIGLTYIYGIGRKRSQEILTNADVNFDTRVKDLTESELARIRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRR +AMNIKRL ++ CYRG+RH++GLPVRGQ+T TNARTRK K V++ Sbjct: 61 DK-YHVEGDLRRDIAMNIKRLKEINCYRGMRHKKGLPVRGQKTKTNARTRKGPKKL-VSK 118 Query: 121 KR 122 K+ Sbjct: 119 KK 120 >gi|294155441|ref|YP_003559825.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145] gi|291600534|gb|ADE20030.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145] Length = 122 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRVV +L YI+GIG ++ IC + I + RV L E E+ +IR+ + Sbjct: 1 MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKINEDSRVKSLSEEELSRIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKKFTTEGDLRREVNLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|317182542|dbj|BAJ60326.1| 30S ribosomal protein S13 [Helicobacter pylori F57] Length = 120 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQGYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|270307865|ref|YP_003329923.1| ribosomal protein S13 [Dehalococcoides sp. VS] gi|270153757|gb|ACZ61595.1| ribosomal protein S13 [Dehalococcoides sp. VS] Length = 129 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 58/120 (48%), Positives = 84/120 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLAQAGVDKAIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+ LPVRGQRT TNARTR+ K R Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120 >gi|156932258|ref|YP_001436174.1| 30S ribosomal protein S13 [Cronobacter sakazakii ATCC BAA-894] gi|260599618|ref|YP_003212189.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032] gi|156530512|gb|ABU75338.1| hypothetical protein ESA_00029 [Cronobacter sakazakii ATCC BAA-894] gi|260218795|emb|CBA34143.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032] Length = 118 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAVGFAEDVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|295425629|ref|ZP_06818316.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664] gi|295064645|gb|EFG55566.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664] Length = 116 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/115 (55%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVVALTYIYGIGEPTAKKICKDAGVSEDIRSKDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+GCYRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGCYRGIRHRRGLPVRGQNTKNNARTRKGAKR 114 >gi|56707500|ref|YP_169396.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis SCHU S4] gi|89255692|ref|YP_513053.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica LVS] gi|110669971|ref|YP_666528.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC198] gi|115314192|ref|YP_762915.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica OSU18] gi|118496874|ref|YP_897924.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida U112] gi|134302564|ref|YP_001122534.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis WY96-3418] gi|156501640|ref|YP_001427705.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010991|ref|ZP_02275922.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. holarctica FSC200] gi|187932121|ref|YP_001892106.1| 30S ribosomal protein S13 [Francisella tularensis subsp. mediasiatica FSC147] gi|194324096|ref|ZP_03057870.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida FTE] gi|208780322|ref|ZP_03247663.1| ribosomal protein S13p/S18e [Francisella novicida FTG] gi|224456563|ref|ZP_03665036.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis MA00-2987] gi|254367073|ref|ZP_04983108.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica 257] gi|254368643|ref|ZP_04984658.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FSC022] gi|254370811|ref|ZP_04986816.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC033] gi|254372231|ref|ZP_04987722.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida GA99-3549] gi|254373713|ref|ZP_04989196.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548] gi|254874320|ref|ZP_05247030.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp. tularensis MA00-2987] gi|290953191|ref|ZP_06557812.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica URFT1] gi|295313559|ref|ZP_06804148.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica URFT1] gi|81597922|sp|Q5NHU6|RS13_FRATT RecName: Full=30S ribosomal protein S13 gi|122325770|sp|Q0BNQ6|RS13_FRATO RecName: Full=30S ribosomal protein S13 gi|122501252|sp|Q2A5E8|RS13_FRATH RecName: Full=30S ribosomal protein S13 gi|123169579|sp|Q14J98|RS13_FRAT1 RecName: Full=30S ribosomal protein S13 gi|158706231|sp|A0Q4K5|RS13_FRATN RecName: Full=30S ribosomal protein S13 gi|158706232|sp|A4IZR2|RS13_FRATW RecName: Full=30S ribosomal protein S13 gi|166231912|sp|A7N9U6|RS13_FRATF RecName: Full=30S ribosomal protein S13 gi|226712740|sp|B2SDW3|RS13_FRATM RecName: Full=30S ribosomal protein S13 gi|56603992|emb|CAG44980.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis SCHU S4] gi|89143523|emb|CAJ78699.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica LVS] gi|110320304|emb|CAL08363.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC198] gi|115129091|gb|ABI82278.1| ribosomal protein S13 [Francisella tularensis subsp. holarctica OSU18] gi|118422780|gb|ABK89170.1| 30S ribosomal protein S13 [Francisella novicida U112] gi|134050341|gb|ABO47412.1| ribosomal protein S13 [Francisella tularensis subsp. tularensis WY96-3418] gi|134252898|gb|EBA51992.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica 257] gi|151569054|gb|EDN34708.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis FSC033] gi|151569960|gb|EDN35614.1| 30S ribosomal protein S13 [Francisella novicida GA99-3549] gi|151571434|gb|EDN37088.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548] gi|156252243|gb|ABU60749.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121551|gb|EDO65736.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica FSC022] gi|187713030|gb|ACD31327.1| 30S ribosomal protein S13 [Francisella tularensis subsp. mediasiatica FSC147] gi|194321543|gb|EDX19027.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida FTE] gi|208743690|gb|EDZ89993.1| ribosomal protein S13p/S18e [Francisella novicida FTG] gi|254840319|gb|EET18755.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp. tularensis MA00-2987] gi|282158644|gb|ADA78035.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis NE061598] gi|328676343|gb|AEB27213.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida Fx1] Length = 118 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 1/119 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E +V +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEEQVESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK K A Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118 >gi|315304919|ref|ZP_07875023.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596] gi|313626710|gb|EFR95739.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|223038487|ref|ZP_03608781.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267] gi|255321749|ref|ZP_05362904.1| 30S ribosomal protein S13 [Campylobacter showae RM3277] gi|222880344|gb|EEF15431.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267] gi|255301229|gb|EET80491.1| 30S ribosomal protein S13 [Campylobacter showae RM3277] Length = 122 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L YI+GIG S+ I + I ++RV+ L E E IR+ I Sbjct: 1 MARIAGVDLPKKKRIEYGLTYIYGIGLHKSRQILDATKISYDKRVNDLTEDEAAAIRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK K A Sbjct: 61 QENHVVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAA 120 Query: 121 KR 122 + Sbjct: 121 TK 122 >gi|72163019|ref|YP_290676.1| 30S ribosomal protein S13 [Thermobifida fusca YX] gi|91207629|sp|Q47LL9|RS13_THEFY RecName: Full=30S ribosomal protein S13 gi|71916751|gb|AAZ56653.1| SSU ribosomal protein S13P [Thermobifida fusca YX] Length = 126 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 86/110 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG + + + P+ RV+QL E E++++R+ I Sbjct: 1 MARIAGVDLPRDKRVEVALTYVYGIGRSRAAETLANTGVNPDTRVYQLTEEELVKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 DANYKVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|317050552|ref|YP_004111668.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5] gi|316945636|gb|ADU65112.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5] Length = 120 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 89/122 (72%), Gaps = 2/122 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++P+ KRV L YI+G+G S+ I ++I +++V +L E EV +R+A+ Sbjct: 1 MARVAGVDLPKNKRVEIGLTYIYGVGRSRSRQILANVSIDMDKKVGELSEDEVNTLRKAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y VEGDLR+ V+++IKRL DLGCYRGLRHR GLPVRGQ T N+RTRK + V + Sbjct: 61 EE-YDVEGDLRKNVSLDIKRLKDLGCYRGLRHRSGLPVRGQNTKNNSRTRKGPKRT-VGK 118 Query: 121 KR 122 K+ Sbjct: 119 KK 120 >gi|53720798|ref|YP_109784.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243] gi|53723831|ref|YP_104143.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 23344] gi|76808694|ref|YP_335117.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710b] gi|121599064|ref|YP_994433.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1] gi|124383459|ref|YP_001027918.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229] gi|126441434|ref|YP_001060727.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668] gi|126450605|ref|YP_001083013.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247] gi|126452378|ref|YP_001068011.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a] gi|134283124|ref|ZP_01769825.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305] gi|167001676|ref|ZP_02267468.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20] gi|167721554|ref|ZP_02404790.1| 30S ribosomal protein S13 [Burkholderia pseudomallei DM98] gi|167740528|ref|ZP_02413302.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 14] gi|167817733|ref|ZP_02449413.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 91] gi|167826130|ref|ZP_02457601.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 9] gi|167838189|ref|ZP_02465048.1| 30S ribosomal protein S13 [Burkholderia thailandensis MSMB43] gi|167847642|ref|ZP_02473150.1| 30S ribosomal protein S13 [Burkholderia pseudomallei B7210] gi|167896214|ref|ZP_02483616.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 7894] gi|167904596|ref|ZP_02491801.1| 30S ribosomal protein S13 [Burkholderia pseudomallei NCTC 13177] gi|167912861|ref|ZP_02499952.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 112] gi|167920820|ref|ZP_02507911.1| 30S ribosomal protein S13 [Burkholderia pseudomallei BCC215] gi|217424717|ref|ZP_03456214.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576] gi|226198266|ref|ZP_03793837.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9] gi|237814122|ref|YP_002898573.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346] gi|238562961|ref|ZP_00439643.2| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4] gi|242316204|ref|ZP_04815220.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b] gi|254175202|ref|ZP_04881863.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399] gi|254180362|ref|ZP_04886960.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655] gi|254190325|ref|ZP_04896833.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237] gi|254198511|ref|ZP_04904932.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13] gi|254201216|ref|ZP_04907580.1| 30S ribosomal protein S13 [Burkholderia mallei FMH] gi|254206557|ref|ZP_04912908.1| 30S ribosomal protein S13 [Burkholderia mallei JHU] gi|254261560|ref|ZP_04952614.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a] gi|254300599|ref|ZP_04968044.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e] gi|254357095|ref|ZP_04973369.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280] gi|81378947|sp|Q63Q34|RS13_BURPS RecName: Full=30S ribosomal protein S13 gi|81604188|sp|Q62GM8|RS13_BURMA RecName: Full=30S ribosomal protein S13 gi|91207691|sp|Q3JMT6|RS13_BURP1 RecName: Full=30S ribosomal protein S13 gi|158706218|sp|A3P090|RS13_BURP0 RecName: Full=30S ribosomal protein S13 gi|166231899|sp|A3MRX7|RS13_BURM7 RecName: Full=30S ribosomal protein S13 gi|166231900|sp|A2S7J9|RS13_BURM9 RecName: Full=30S ribosomal protein S13 gi|166231901|sp|A1V880|RS13_BURMS RecName: Full=30S ribosomal protein S13 gi|166231902|sp|A3NEF6|RS13_BURP6 RecName: Full=30S ribosomal protein S13 gi|52211212|emb|CAH37201.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243] gi|52427254|gb|AAU47847.1| ribosomal protein S13 [Burkholderia mallei ATCC 23344] gi|76578147|gb|ABA47622.1| ribosomal protein S13p/S18e [Burkholderia pseudomallei 1710b] gi|121227874|gb|ABM50392.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1] gi|124291479|gb|ABN00748.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229] gi|126220927|gb|ABN84433.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668] gi|126226020|gb|ABN89560.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a] gi|126243475|gb|ABO06568.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247] gi|134245319|gb|EBA45412.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305] gi|147747110|gb|EDK54186.1| 30S ribosomal protein S13 [Burkholderia mallei FMH] gi|147752099|gb|EDK59165.1| 30S ribosomal protein S13 [Burkholderia mallei JHU] gi|148026159|gb|EDK84244.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280] gi|157810485|gb|EDO87655.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e] gi|157938001|gb|EDO93671.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237] gi|160696247|gb|EDP86217.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399] gi|169655251|gb|EDS87944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13] gi|184210901|gb|EDU07944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655] gi|217392173|gb|EEC32198.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576] gi|225929786|gb|EEH25802.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9] gi|237506633|gb|ACQ98951.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346] gi|238521645|gb|EEP85095.1| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4] gi|242139443|gb|EES25845.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b] gi|243062573|gb|EES44759.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20] gi|254220249|gb|EET09633.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|152978163|ref|YP_001343792.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z] gi|150839886|gb|ABR73857.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z] Length = 118 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQTICAAAGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|94266331|ref|ZP_01290033.1| Ribosomal protein S13 [delta proteobacterium MLMS-1] gi|93453085|gb|EAT03564.1| Ribosomal protein S13 [delta proteobacterium MLMS-1] Length = 122 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP+ K + AL YIHGIG S++ I + +P R +L + E+ +IR+ + Sbjct: 1 MARLAGVDIPKNKHMEVALTYIHGIGRSSARRILDLAGLPYNRNSDELADGEIAEIRKIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + VEGD RR V M+IKRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK + V Sbjct: 61 EEQFVVEGDRRREVGMDIKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAAVKS 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|195977232|ref|YP_002122476.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225867689|ref|YP_002743637.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus] gi|225869560|ref|YP_002745507.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047] gi|226712787|sp|B4U524|RS13_STREM RecName: Full=30S ribosomal protein S13 gi|254811166|sp|C0M7C5|RS13_STRE4 RecName: Full=30S ribosomal protein S13 gi|259494691|sp|C0ME29|RS13_STRS7 RecName: Full=30S ribosomal protein S13 gi|195973937|gb|ACG61463.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225698964|emb|CAW92011.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047] gi|225700965|emb|CAW97686.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|288904297|ref|YP_003429518.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34] gi|306830326|ref|ZP_07463497.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|306832571|ref|ZP_07465711.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338] gi|325977276|ref|YP_004286992.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731022|emb|CBI12566.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34] gi|304425329|gb|EFM28455.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338] gi|304427573|gb|EFM30674.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177204|emb|CBZ47248.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 121 Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|205372044|ref|ZP_03224861.1| 30S ribosomal protein S13 [Bacillus coahuilensis m4-4] Length = 127 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI+G+G ++Q I + + + RV L E E+ +IR + Sbjct: 1 MARIAGVDIPREKRVVISLTYIYGVGKNTAQKILAEAGVSEDTRVRDLTEEELGKIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR +++NIKRLM++G +RG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DT-YKVEGDLRREISLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119 Query: 121 KR 122 ++ Sbjct: 120 EK 121 >gi|313884421|ref|ZP_07818182.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8] gi|312620205|gb|EFR31633.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8] Length = 120 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 68/121 (56%), Positives = 85/121 (70%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG K++Q+I + + + RV L E+ +IRQ I Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKKTAQNILAEANVSEDTRVKDLTNEELDRIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR + M+IKRL ++G YRGLRHRRGLPVRGQ T NARTRK K + Sbjct: 61 D-GIKVEGDLRRDIRMDIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPKKSLAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|199598856|ref|ZP_03212267.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001] gi|229552731|ref|ZP_04441456.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1] gi|258509458|ref|YP_003172209.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG] gi|258540656|ref|YP_003175155.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus Lc 705] gi|199590268|gb|EDY98363.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001] gi|229313937|gb|EEN79910.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1] gi|257149385|emb|CAR88358.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus GG] gi|257152332|emb|CAR91304.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus Lc 705] gi|259650737|dbj|BAI42899.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG] Length = 121 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKATMAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|224534712|ref|ZP_03675284.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S] gi|224513960|gb|EEF84282.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S] Length = 125 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CN+ +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLRIALTSIYGIGRTRALEVCNRASISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|116266144|gb|ABJ91310.1| 30S ribosomal protein S13 [Porphyra yezoensis] Length = 126 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + + L + +V+ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT NARTR+ K + Sbjct: 61 ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRINARTRRGGKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|121609263|ref|YP_997070.1| 30S ribosomal protein S13 [Verminephrobacter eiseniae EF01-2] gi|158706293|sp|A1WK95|RS13_VEREI RecName: Full=30S ribosomal protein S13 gi|121553903|gb|ABM58052.1| SSU ribosomal protein S13P [Verminephrobacter eiseniae EF01-2] Length = 121 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC+ I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRNRARKICDASGIAYSKKIKDLTDGDLEKIRVQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 EQ + +EGDLRR MNIKRLMD+GCYRG RHRRGLPVRGQRT TNARTRK KG A Sbjct: 61 EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|328675429|gb|AEB28104.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida 3523] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 1/119 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E +V +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEDQVESLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK K A Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118 >gi|68249395|ref|YP_248507.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP] gi|145628306|ref|ZP_01784107.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21] gi|145630546|ref|ZP_01786326.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|145632158|ref|ZP_01787893.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655] gi|145634789|ref|ZP_01790497.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA] gi|145638399|ref|ZP_01794009.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII] gi|148826556|ref|YP_001291309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE] gi|148827988|ref|YP_001292741.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG] gi|229844667|ref|ZP_04464806.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1] gi|229845850|ref|ZP_04465962.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1] gi|260579891|ref|ZP_05847721.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW] gi|260581616|ref|ZP_05849413.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127] gi|319775266|ref|YP_004137754.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047] gi|319897706|ref|YP_004135903.1| 30S ribosomal subunit protein s13 [Haemophilus influenzae F3031] gi|81336178|sp|Q4QMA0|RS13_HAEI8 RecName: Full=30S ribosomal protein S13 gi|158706235|sp|A5UDS5|RS13_HAEIE RecName: Full=30S ribosomal protein S13 gi|158706236|sp|A5UHV2|RS13_HAEIG RecName: Full=30S ribosomal protein S13 gi|68057594|gb|AAX87847.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP] gi|144980081|gb|EDJ89740.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21] gi|144983936|gb|EDJ91378.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|144987065|gb|EDJ93595.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655] gi|145267955|gb|EDK07951.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA] gi|145272728|gb|EDK12635.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII] gi|148716716|gb|ABQ98926.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE] gi|148719230|gb|ABR00358.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG] gi|229810854|gb|EEP46571.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1] gi|229812381|gb|EEP48071.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1] gi|260093175|gb|EEW77108.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW] gi|260095209|gb|EEW79100.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127] gi|301169518|emb|CBW29119.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae 10810] gi|309751539|gb|ADO81523.1| 30S ribosomal protein S13 [Haemophilus influenzae R2866] gi|309973709|gb|ADO96910.1| 30S ribosomal protein S13 [Haemophilus influenzae R2846] gi|317433212|emb|CBY81587.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3031] gi|317449857|emb|CBY86068.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|120609323|ref|YP_969001.1| 30S ribosomal protein S13 [Acidovorax citrulli AAC00-1] gi|326315412|ref|YP_004233084.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC 19860] gi|158706206|sp|A1TJT9|RS13_ACIAC RecName: Full=30S ribosomal protein S13 gi|120587787|gb|ABM31227.1| SSU ribosomal protein S13P [Acidovorax citrulli AAC00-1] gi|323372248|gb|ADX44517.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 121 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEACGIAYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|311896538|dbj|BAJ28946.1| putative ribosomal protein S13 [Kitasatospora setae KM-6054] Length = 126 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KR+ AL Y++GIG +Q + + + RV + E +++++++ + Sbjct: 1 MARLSGVDLPREKRIEIALTYVYGIGKTRAQLALAETGVSGDIRVRDISEDDLVKLQKFV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++VEGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRTHTNARTRK + + Sbjct: 61 DANFEVEGDLRRQVAADIRRKVEIGCYEGLRHRRGLPVRGQRTHTNARTRKGPRRAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 [Enterobacter sp. 638] gi|145320239|gb|ABP62386.1| SSU ribosomal protein S13P [Enterobacter sp. 638] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|317013083|gb|ADU83691.1| 30S ribosomal protein S13 [Helicobacter pylori Lithuania75] Length = 120 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELNEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|315587185|gb|ADU41566.1| 30S ribosomal protein S13 [Helicobacter pylori 35A] Length = 120 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG K+S++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKNSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|261867276|ref|YP_003255198.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412608|gb|ACX81979.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans D11S-1] gi|301155352|emb|CBW14818.1| 30S ribosomal subunit protein S13 [Haemophilus parainfluenzae T3T1] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|227538695|ref|ZP_03968744.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300] gi|300770228|ref|ZP_07080107.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33861] gi|227241614|gb|EEI91629.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300] gi|300762704|gb|EFK59521.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33861] Length = 125 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++ I +K I + +V + ++ IR I Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGRQTAAYILDKAGISEDVKVQDWNDDQLAAIRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEG LR V +NIKRLMD+GCYRGLRHR+ LPVRGQRT N RTRK K + Sbjct: 61 NDELKVEGALRSEVQLNIKRLMDIGCYRGLRHRKHLPVRGQRTKNNTRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|284006141|emb|CBA71383.1| 30S ribosomal protein S13 [Arsenophonus nasoniae] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQSICAASGIAEHVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YIVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320] gi|194684577|emb|CAR46425.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|93005336|ref|YP_579773.1| 30S ribosomal protein S13 [Psychrobacter cryohalolentis K5] gi|122415888|sp|Q1QDG4|RS13_PSYCK RecName: Full=30S ribosomal protein S13 gi|92393014|gb|ABE74289.1| SSU ribosomal protein S13P [Psychrobacter cryohalolentis K5] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 64/116 (55%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++Q I + I P +V QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK + Sbjct: 61 AE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPTRP 115 >gi|237742281|ref|ZP_04572762.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13] gi|256845560|ref|ZP_05551018.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2] gi|294785151|ref|ZP_06750439.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27] gi|229429929|gb|EEO40141.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13] gi|256719119|gb|EEU32674.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2] gi|294486865|gb|EFG34227.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + + + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVKGPKKPI 116 >gi|224531523|ref|ZP_03672155.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116] gi|224510988|gb|EEF81394.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116] Length = 125 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 84/121 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CN+ I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNRSNISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|74316445|ref|YP_314185.1| 30S ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259] gi|91207631|sp|Q3SLM7|RS13_THIDA RecName: Full=30S ribosomal protein S13 gi|74055940|gb|AAZ96380.1| ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259] Length = 118 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V AL I+GIG +S IC I ++ L E+E+ ++R+ + Sbjct: 1 MARIAGVNIPNHQHAVIALTAIYGIGRTTSGKICEAAGIAQTSKIKDLSEAEMERLREGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TNARTRK K Sbjct: 61 SK-FTVEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNARTRKGPRKAI 116 >gi|237744172|ref|ZP_04574653.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1] gi|256027713|ref|ZP_05441547.1| 30S ribosomal protein S13 [Fusobacterium sp. D11] gi|260494242|ref|ZP_05814373.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33] gi|289765672|ref|ZP_06525050.1| SSU ribosomal protein S13P [Fusobacterium sp. D11] gi|229431401|gb|EEO41613.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1] gi|260198388|gb|EEW95904.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33] gi|289717227|gb|EFD81239.1| SSU ribosomal protein S13P [Fusobacterium sp. D11] Length = 118 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + + + RV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVKGPKKPI 116 >gi|51598755|ref|YP_072943.1| 30S ribosomal protein S13 [Borrelia garinii PBi] gi|219684427|ref|ZP_03539371.1| ribosomal protein S13p/S18e [Borrelia garinii PBr] gi|219685178|ref|ZP_03539998.1| ribosomal protein S13p/S18e [Borrelia garinii Far04] gi|81609962|sp|Q661C0|RS13_BORGA RecName: Full=30S ribosomal protein S13 gi|51573326|gb|AAU07351.1| ribosomal protein S13 [Borrelia garinii PBi] gi|219672416|gb|EED29469.1| ribosomal protein S13p/S18e [Borrelia garinii PBr] gi|219673274|gb|EED30293.1| ribosomal protein S13p/S18e [Borrelia garinii Far04] Length = 125 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|15900170|ref|NP_344774.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TIGR4] gi|15902257|ref|NP_357807.1| 30S ribosomal protein S13 [Streptococcus pneumoniae R6] gi|111658778|ref|ZP_01409409.1| hypothetical protein SpneT_02000075 [Streptococcus pneumoniae TIGR4] gi|116516047|ref|YP_815735.1| 30S ribosomal protein S13 [Streptococcus pneumoniae D39] gi|148983633|ref|ZP_01816952.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71] gi|148987971|ref|ZP_01819434.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73] gi|148992811|ref|ZP_01822454.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68] gi|148996656|ref|ZP_01824374.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70] gi|149005985|ref|ZP_01829714.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74] gi|149011104|ref|ZP_01832409.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75] gi|149017924|ref|ZP_01834383.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72] gi|168483871|ref|ZP_02708823.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00] gi|168485999|ref|ZP_02710507.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00] gi|168489711|ref|ZP_02713910.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195] gi|168492188|ref|ZP_02716331.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04] gi|168493928|ref|ZP_02718071.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06] gi|168576339|ref|ZP_02722222.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016] gi|169833118|ref|YP_001693765.1| 30S ribosomal protein S13 [Streptococcus pneumoniae Hungary19A-6] gi|182683211|ref|YP_001834958.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14] gi|221231136|ref|YP_002510288.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669] gi|225853839|ref|YP_002735351.1| 30S ribosomal protein S13 [Streptococcus pneumoniae JJA] gi|225855998|ref|YP_002737509.1| 30S ribosomal protein S13 [Streptococcus pneumoniae P1031] gi|225858087|ref|YP_002739597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae 70585] gi|237649699|ref|ZP_04523951.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974] gi|237821397|ref|ZP_04597242.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974M2] gi|270292024|ref|ZP_06198239.1| ribosomal protein S13 [Streptococcus sp. M143] gi|289168708|ref|YP_003446977.1| 30S ribosomal protein S13 [Streptococcus mitis B6] gi|293364324|ref|ZP_06611050.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|298230390|ref|ZP_06964071.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298256011|ref|ZP_06979597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502047|ref|YP_003723987.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A] gi|303255071|ref|ZP_07341147.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455] gi|303259285|ref|ZP_07345263.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293] gi|303261040|ref|ZP_07346989.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292] gi|303263368|ref|ZP_07349291.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397] gi|303265533|ref|ZP_07351433.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457] gi|303267909|ref|ZP_07353711.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458] gi|306825963|ref|ZP_07459299.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306828806|ref|ZP_07461998.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249] gi|307066911|ref|YP_003875877.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200] gi|307126452|ref|YP_003878483.1| 30S ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B] gi|307702709|ref|ZP_07639661.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|307704088|ref|ZP_07641017.1| 30S ribosomal protein S13 [Streptococcus mitis SK597] gi|307708083|ref|ZP_07644551.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261] gi|307709934|ref|ZP_07646381.1| 30S ribosomal protein S13 [Streptococcus mitis SK564] gi|307711032|ref|ZP_07647454.1| 30S ribosomal protein S13 [Streptococcus mitis SK321] gi|315612355|ref|ZP_07887268.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296] gi|322375016|ref|ZP_08049530.1| 30S ribosomal protein S13 [Streptococcus sp. C300] gi|322377207|ref|ZP_08051699.1| 30S ribosomal protein S13 [Streptococcus sp. M334] gi|331267111|ref|YP_004326741.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5] gi|54039354|sp|P66393|RS13_STRR6 RecName: Full=30S ribosomal protein S13 gi|54042125|sp|P66392|RS13_STRPN RecName: Full=30S ribosomal protein S13 gi|122279379|sp|Q04ML3|RS13_STRP2 RecName: Full=30S ribosomal protein S13 gi|226712791|sp|B1I8M2|RS13_STRPI RecName: Full=30S ribosomal protein S13 gi|226712792|sp|B2IS65|RS13_STRPS RecName: Full=30S ribosomal protein S13 gi|254811167|sp|C1CAN6|RS13_STRP7 RecName: Full=30S ribosomal protein S13 gi|254811168|sp|B8ZKQ3|RS13_STRPJ RecName: Full=30S ribosomal protein S13 gi|254811170|sp|C1CC30|RS13_STRZJ RecName: Full=30S ribosomal protein S13 gi|254811171|sp|C1CIC1|RS13_STRZP RecName: Full=30S ribosomal protein S13 gi|14971703|gb|AAK74414.1| ribosomal protein S13 [Streptococcus pneumoniae TIGR4] gi|15457758|gb|AAK99017.1| 30S Ribosomal protein S13 [Streptococcus pneumoniae R6] gi|116076623|gb|ABJ54343.1| ribosomal protein S13 [Streptococcus pneumoniae D39] gi|147757231|gb|EDK64270.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70] gi|147762341|gb|EDK69302.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74] gi|147764740|gb|EDK71670.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75] gi|147923780|gb|EDK74892.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71] gi|147926435|gb|EDK77508.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73] gi|147928537|gb|EDK79552.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68] gi|147931488|gb|EDK82466.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72] gi|168995620|gb|ACA36232.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae Hungary19A-6] gi|172042881|gb|EDT50927.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00] gi|182628545|gb|ACB89493.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14] gi|183570892|gb|EDT91420.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00] gi|183571844|gb|EDT92372.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195] gi|183573602|gb|EDT94130.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04] gi|183576250|gb|EDT96778.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06] gi|183577820|gb|EDT98348.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016] gi|220673596|emb|CAR68082.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669] gi|225720993|gb|ACO16847.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 70585] gi|225723327|gb|ACO19180.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae JJA] gi|225725374|gb|ACO21226.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae P1031] gi|270279552|gb|EFA25394.1| ribosomal protein S13 [Streptococcus sp. M143] gi|288908275|emb|CBJ23117.1| 30S ribosomal protein S13 [Streptococcus mitis B6] gi|291317170|gb|EFE57597.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|298237642|gb|ADI68773.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A] gi|301793505|emb|CBW35878.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV104] gi|301799381|emb|CBW31916.1| 30S ribosomal protein S13 [Streptococcus pneumoniae OXC141] gi|301801176|emb|CBW33849.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV200] gi|302597901|gb|EFL64971.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455] gi|302637877|gb|EFL68363.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292] gi|302639703|gb|EFL70160.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293] gi|302642605|gb|EFL72950.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458] gi|302644973|gb|EFL75220.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457] gi|302647141|gb|EFL77365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397] gi|304428984|gb|EFM32072.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249] gi|304431679|gb|EFM34659.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306408448|gb|ADM83875.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200] gi|306483514|gb|ADM90383.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B] gi|307615868|gb|EFN95073.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261] gi|307616994|gb|EFN96172.1| 30S ribosomal protein S13 [Streptococcus mitis SK321] gi|307619305|gb|EFN98434.1| 30S ribosomal protein S13 [Streptococcus mitis SK564] gi|307622378|gb|EFO01386.1| 30S ribosomal protein S13 [Streptococcus mitis SK597] gi|307623825|gb|EFO02810.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037] gi|315315336|gb|EFU63375.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296] gi|321280516|gb|EFX57555.1| 30S ribosomal protein S13 [Streptococcus sp. C300] gi|321281920|gb|EFX58928.1| 30S ribosomal protein S13 [Streptococcus sp. M334] gi|326683783|emb|CBZ01401.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5] gi|327390651|gb|EGE88991.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA04375] gi|332075898|gb|EGI86365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17570] gi|332077534|gb|EGI87995.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA41301] Length = 121 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|328949255|ref|YP_004366592.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489] gi|328449579|gb|AEB15295.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489] Length = 122 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 57/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL Y++GIG S+ IC + P ++ L E ++ ++R+ I Sbjct: 1 MARIAGVDLP-NKHVNIALTYVYGIGRSSANKICEATNVDPHAHLNDLSEDDLTKLRKYI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +++++ EG LR + +NIKRLMD+G YRGLRHR+GLP RGQRT TN+RTRK Sbjct: 60 DENFKTEGRLRSEIGLNIKRLMDIGSYRGLRHRKGLPCRGQRTRTNSRTRKG 111 >gi|320108371|ref|YP_004183961.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4] gi|319926892|gb|ADV83967.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4] Length = 126 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+ AL YI GIG + I K I P R++ L E E+ +IRQ I Sbjct: 1 MARIAGVDLPNNKQAKIALTYIFGIGDPRALSILKKADIDPIRKMQTLDEDELNKIRQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLR+ +++NIKRL+++ YRGLRHRR LPVRGQRTHTNARTRK KG VA Sbjct: 61 EAEGGIEGDLRKDISLNIKRLIEIQSYRGLRHRRNLPVRGQRTHTNARTRKGPRKGTVAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307720210|ref|YP_003891350.1| 30S ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294] gi|306978303|gb|ADN08338.1| SSU ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294] Length = 120 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 64/119 (53%), Positives = 84/119 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L YI+GIG +++ I + I +RV +L E +V I + I Sbjct: 1 MARISGVDLPKKKRIEYGLTYIYGIGLHTARQILDATGIDYNKRVFELNEEDVAAITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK K A Sbjct: 61 RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119 >gi|149371652|ref|ZP_01891068.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49] gi|149355279|gb|EDM43839.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49] Length = 124 Score = 168 bits (428), Expect = 1e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG S+ I K + +++V++ + E+ IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGNSRSKAILEKAGVSEDKKVNEWNDEEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GS-FTIEGELRSEVQLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|5163228|gb|AAD40607.1|AF115283_26 ribosomal protein S13 [Leptospira interrogans] Length = 125 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG S+ I K I RV L ES+ IR+ + Sbjct: 1 MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ +VEGDLR + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK K + Sbjct: 61 EETAKVEGDLRSEIRLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|31544834|ref|NP_853412.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)] gi|26399325|sp|Q9RDV8|RS13_MYCGA RecName: Full=30S ribosomal protein S13 gi|6601580|gb|AAF19041.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum] gi|31541680|gb|AAP56980.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)] gi|284930908|gb|ADC30847.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(high)] gi|284931664|gb|ADC31602.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. F] Length = 124 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KRV +L YI+GIG +Q+I K I +RV L + E+ IR + Sbjct: 1 MARILGIDIPNNKRVEISLTYIYGIGKPRAQEILRKAKIDFNKRVKDLSDEELALIRS-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y +EGDLRR VA+NIKRLM++G Y GLRHRRGLPVRGQRT +NARTRK K + Sbjct: 60 ASTYVLEGDLRRDVALNIKRLMEVGSYAGLRHRRGLPVRGQRTKSNARTRKGPRKTVANK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|313677143|ref|YP_004055139.1| SSU ribosomal protein s13p [Marivirga tractuosa DSM 4126] gi|312943841|gb|ADR23031.1| SSU ribosomal protein S13P [Marivirga tractuosa DSM 4126] Length = 125 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV+IP KR V +L YI G+G SS I + +++V + E IR I Sbjct: 1 MARVSGVDIPDNKRGVISLTYIFGLGKSSSAKILEMAGVDADKKVSDWTDDEANSIRTVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++++ EG L+ V M+IKRL+D+GCYRGLRHR+GLP+RGQRT N+RTRK K + Sbjct: 61 SENFKTEGVLKSEVQMSIKRLLDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] gi|262066973|ref|ZP_06026585.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693] gi|294782960|ref|ZP_06748286.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA] gi|229421965|gb|EEO37012.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31] gi|291379321|gb|EFE86839.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693] gi|294481601|gb|EFG29376.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|16762865|ref|NP_458482.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144352|ref|NP_807694.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213052886|ref|ZP_03345764.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425773|ref|ZP_03358523.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580695|ref|ZP_03362521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213856917|ref|ZP_03384157.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824203|ref|ZP_06543798.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25009165|sp|Q8Z1X6|RS13_SALTI RecName: Full=30S ribosomal protein S13 gi|25294720|pir||AG1008 30S ribosomal chain protein S13 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505172|emb|CAD09168.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhi] gi|29139990|gb|AAO71554.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 116 >gi|170718271|ref|YP_001785289.1| 30S ribosomal protein S13 [Haemophilus somnus 2336] gi|168826400|gb|ACA31771.1| ribosomal protein S13 [Haemophilus somnus 2336] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|86739320|ref|YP_479720.1| 30S ribosomal protein S13 [Frankia sp. CcI3] gi|123724242|sp|Q2JFF1|RS13_FRASC RecName: Full=30S ribosomal protein S13 gi|86566182|gb|ABD09991.1| SSU ribosomal protein S13P [Frankia sp. CcI3] Length = 126 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 83/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV AL YI GIG S+D A+ P+ RV L E E++++R I Sbjct: 1 MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATAVNPDTRVRDLSEEEIVRLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +Y+VEGDL R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|257440243|ref|ZP_05615998.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165] gi|257197277|gb|EEU95561.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165] Length = 130 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 8 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 67 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART K + Sbjct: 68 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 127 Query: 120 RKR 122 +K+ Sbjct: 128 KKK 130 >gi|330997341|ref|ZP_08321192.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841] gi|329570715|gb|EGG52431.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841] Length = 126 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I K + + +V + + IR Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILAKAGVDKDIKVKDWTDEQASNIRAV 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +Y+VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEYKVEGDLRAEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKG 113 >gi|145640898|ref|ZP_01796480.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021] gi|145274412|gb|EDK14276.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.4-21] Length = 122 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|119773376|ref|YP_926116.1| 30S ribosomal protein S13 [Shewanella amazonensis SB2B] gi|158706275|sp|A1S240|RS13_SHEAM RecName: Full=30S ribosomal protein S13 gi|119765876|gb|ABL98446.1| SSU ribosomal protein S13P [Shewanella amazonensis SB2B] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC AI + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGRTRAKAICAATAIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|262377290|ref|ZP_06070514.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145] gi|262307743|gb|EEY88882.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +S+ I I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTSKAILAAAGIAPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|73748341|ref|YP_307580.1| 30S ribosomal protein S13 [Dehalococcoides sp. CBDB1] gi|147669121|ref|YP_001213939.1| 30S ribosomal protein S13 [Dehalococcoides sp. BAV1] gi|289432389|ref|YP_003462262.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT] gi|91207700|sp|Q3ZZP9|RS13_DEHSC RecName: Full=30S ribosomal protein S13 gi|189040501|sp|A5FRW9|RS13_DEHSB RecName: Full=30S ribosomal protein S13 gi|73660057|emb|CAI82664.1| ribosomal protein S13 [Dehalococcoides sp. CBDB1] gi|146270069|gb|ABQ17061.1| SSU ribosomal protein S13P [Dehalococcoides sp. BAV1] gi|288946109|gb|ADC73806.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT] Length = 129 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 58/120 (48%), Positives = 84/120 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+ LPVRGQRT TNARTR+ K R Sbjct: 61 DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120 >gi|331703692|ref|YP_004400379.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256384359|gb|ACU78929.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str. GM12] gi|256385191|gb|ACU79760.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455858|gb|ADH22093.1| 30S ribosomal protein S13 [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802247|emb|CBW54401.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K K + Sbjct: 61 SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|83720972|ref|YP_443549.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264] gi|167582600|ref|ZP_02375474.1| 30S ribosomal protein S13 [Burkholderia thailandensis TXDOH] gi|167620714|ref|ZP_02389345.1| 30S ribosomal protein S13 [Burkholderia thailandensis Bt4] gi|257137665|ref|ZP_05585927.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264] gi|123536224|sp|Q2SU50|RS13_BURTA RecName: Full=30S ribosomal protein S13 gi|83654797|gb|ABC38860.1| ribosomal protein S13p/S18e [Burkholderia thailandensis E264] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I GIG ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|228989343|ref|ZP_04149334.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442] gi|228995526|ref|ZP_04155194.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17] gi|229003151|ref|ZP_04160997.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4] gi|228758114|gb|EEM07313.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4] gi|228764255|gb|EEM13134.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17] gi|228770421|gb|EEM18994.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR + Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-VKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|315122796|ref|YP_004063285.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496198|gb|ADR52797.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 123 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 103/123 (83%), Positives = 108/123 (87%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP KRVVRALCYIHGIGFKSSQDICNKL I PERRVH LVESE+I+IRQAI Sbjct: 1 MARIAGVNIPSTKRVVRALCYIHGIGFKSSQDICNKLGISPERRVHHLVESEIIKIRQAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA- 119 EQ YQVEGDLRR MNIKRLMDLGCYRGLRHRR LPVRGQRT TNA TRK+ GKGG + Sbjct: 61 EQTYQVEGDLRRMTVMNIKRLMDLGCYRGLRHRRNLPVRGQRTRTNACTRKRSGKGGGSV 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|330815272|ref|YP_004358977.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3] gi|327367665|gb|AEA59021.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I G+G ++ IC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVEFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|186477564|ref|YP_001859034.1| 30S ribosomal protein S13 [Burkholderia phymatum STM815] gi|209521363|ref|ZP_03270076.1| ribosomal protein S13 [Burkholderia sp. H160] gi|295677909|ref|YP_003606433.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002] gi|226712708|sp|B2JI42|RS13_BURP8 RecName: Full=30S ribosomal protein S13 gi|184194023|gb|ACC71988.1| ribosomal protein S13 [Burkholderia phymatum STM815] gi|209498183|gb|EDZ98325.1| ribosomal protein S13 [Burkholderia sp. H160] gi|295437752|gb|ADG16922.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+GIG S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + + Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15594845|ref|NP_212634.1| 30S ribosomal protein S13 [Borrelia burgdorferi B31] gi|195941637|ref|ZP_03087019.1| 30S ribosomal protein S13 [Borrelia burgdorferi 80a] gi|216264479|ref|ZP_03436471.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a] gi|218249265|ref|YP_002375010.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7] gi|223888816|ref|ZP_03623407.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b] gi|226320981|ref|ZP_03796526.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805] gi|226321810|ref|ZP_03797336.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26] gi|3914889|sp|O51453|RS13_BORBU RecName: Full=30S ribosomal protein S13 gi|226712698|sp|B7J265|RS13_BORBZ RecName: Full=30S ribosomal protein S13 gi|2688391|gb|AAC66842.1| ribosomal protein S13 (rpsM) [Borrelia burgdorferi B31] gi|215980952|gb|EEC21759.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a] gi|218164453|gb|ACK74514.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7] gi|223885632|gb|EEF56731.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b] gi|226232999|gb|EEH31752.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26] gi|226233582|gb|EEH32318.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805] gi|312149489|gb|ADQ29560.1| ribosomal protein S13p/S18e [Borrelia burgdorferi N40] Length = 125 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 85/121 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK +I P + L EV ++R+ I Sbjct: 1 MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYIVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|111115329|ref|YP_709947.1| 30S ribosomal protein S13 [Borrelia afzelii PKo] gi|122956352|sp|Q0SN07|RS13_BORAP RecName: Full=30S ribosomal protein S13 gi|110890603|gb|ABH01771.1| ribosomal protein S13 [Borrelia afzelii PKo] Length = 125 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 83/121 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P K++ AL I+GIG + ++CNK I + L EV ++R+ I Sbjct: 1 MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISSSKIAKDLDNDEVNRLRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEG LR VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|42779216|ref|NP_976463.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10987] gi|152973981|ref|YP_001373498.1| 30S ribosomal protein S13 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|217957710|ref|YP_002336254.1| 30S ribosomal protein S13 [Bacillus cereus AH187] gi|222093905|ref|YP_002527955.1| 30S ribosomal protein s13 [Bacillus cereus Q1] gi|229136981|ref|ZP_04265608.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26] gi|229194525|ref|ZP_04321328.1| 30S ribosomal protein S13 [Bacillus cereus m1293] gi|81411360|sp|Q73F71|RS13_BACC1 RecName: Full=30S ribosomal protein S13 gi|189040490|sp|A7GK45|RS13_BACCN RecName: Full=30S ribosomal protein S13 gi|226712694|sp|B7HQW9|RS13_BACC7 RecName: Full=30S ribosomal protein S13 gi|254811129|sp|B9IZL9|RS13_BACCQ RecName: Full=30S ribosomal protein S13 gi|42735131|gb|AAS39071.1| ribosomal protein S13 [Bacillus cereus ATCC 10987] gi|152022733|gb|ABS20503.1| ribosomal protein S13 [Bacillus cytotoxicus NVH 391-98] gi|217063520|gb|ACJ77770.1| ribosomal protein S13 [Bacillus cereus AH187] gi|221237953|gb|ACM10663.1| ribosomal protein S13 [Bacillus cereus Q1] gi|228588991|gb|EEK47006.1| 30S ribosomal protein S13 [Bacillus cereus m1293] gi|228646519|gb|EEL02726.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26] gi|324324126|gb|ADY19386.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|251793848|ref|YP_003008580.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700] gi|247535247|gb|ACS98493.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700] Length = 118 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICASAGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|297582475|ref|YP_003698255.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10] gi|297140932|gb|ADH97689.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRVV +L Y+ GIG + I + + RV L E E+ +IR+ + Sbjct: 1 MARVAGVDIPRDKRVVVSLTYVFGIGRSKAAQILTEAGVSENTRVRDLTEDELAKIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T NARTRK + + Sbjct: 61 D-GVKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|229074196|ref|ZP_04207242.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18] gi|229094857|ref|ZP_04225862.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29] gi|229100934|ref|ZP_04231738.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28] gi|229113811|ref|ZP_04243246.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3] gi|228669682|gb|EEL25089.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3] gi|228682513|gb|EEL36586.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28] gi|228688600|gb|EEL42473.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29] gi|228708966|gb|EEL61093.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|160896492|ref|YP_001562074.1| 30S ribosomal protein S13 [Delftia acidovorans SPH-1] gi|226712728|sp|A9BRX2|RS13_DELAS RecName: Full=30S ribosomal protein S13 gi|160362076|gb|ABX33689.1| ribosomal protein S13 [Delftia acidovorans SPH-1] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++ IC I +++ +L + ++ +IR + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIYGIGRTTARKICEAAGIAYSKKIKELTDGDLEKIRDQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 TS-LTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|332040530|gb|EGI76906.1| 30S ribosomal protein S13 [Hylemonella gracilis ATCC 19624] Length = 121 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC IP ++V L +++ +IR I Sbjct: 1 MARIAGINIPPHQHTEIGLTAIFGIGRTRARKICVACGIPFSKKVKDLTDADQEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG+RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGMRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|312889343|ref|ZP_07748897.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603] gi|311298220|gb|EFQ75335.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603] Length = 125 Score = 168 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR L YI GIG ++QDI + I +V + ++ IR I Sbjct: 1 MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQDILTEAGIDFNTKVQDWTDEQLTSIRGII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEG LR V +NIKRLMD+GCYRG RHR+GLP+RGQRT N+RTRK K + Sbjct: 61 NERIKVEGALRSEVQLNIKRLMDIGCYRGTRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|229821595|ref|YP_002883121.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333] gi|259494668|sp|C5C0G3|RS13_BEUC1 RecName: Full=30S ribosomal protein S13 gi|229567508|gb|ACQ81359.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333] Length = 126 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+G+G + D I P+ RV L ++E++ +R + Sbjct: 1 MARLVGVDLPRDKRLEVALTYIYGVGRTRAADTLKATGISPDLRVKDLGDAEIVALRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK + + Sbjct: 61 EGNYKIEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|261400074|ref|ZP_05986199.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970] gi|313667463|ref|YP_004047747.1| 30S ribosomal protein S13 [Neisseria lactamica ST-640] gi|269210299|gb|EEZ76754.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970] gi|309379137|emb|CBX22268.1| 30S ribosomal protein S13 [Neisseria lactamica Y92-1009] gi|313004925|emb|CBN86351.1| 30S ribosomal protein S13 [Neisseria lactamica 020-06] Length = 120 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP +V + I+GIG ++ IC I P + L E+++ +R+ + Sbjct: 1 MARIAGVNIPNNAHIVIGIQAIYGIGAARAKLICEAANIAPTTKAKDLDEAQLDALREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK K + Sbjct: 61 AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|109946780|ref|YP_664008.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba] gi|123173598|sp|Q17ZB7|RS13_HELAH RecName: Full=30S ribosomal protein S13 gi|109714001|emb|CAJ99009.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba] gi|307637967|gb|ADN80417.1| SSU ribosomal protein S13p:S18e [Helicobacter pylori 908] gi|325996572|gb|ADZ51977.1| 30S ribosomal protein S13 [Helicobacter pylori 2018] gi|325998162|gb|ADZ50370.1| 30S ribosomal protein S13 [Helicobacter pylori 2017] Length = 120 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 87/120 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS++I + I ++RVH+L E E I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEASSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|13357815|ref|NP_078089.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167971971|ref|ZP_02554248.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282409|ref|ZP_02690076.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|168308562|ref|ZP_02691237.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|170762081|ref|YP_001752338.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|32363424|sp|Q9PQN6|RS13_UREPA RecName: Full=30S ribosomal protein S13 gi|189044304|sp|B1AIP4|RS13_UREP2 RecName: Full=30S ribosomal protein S13 gi|11276601|pir||H82917 ribosomal protein S13 UU255 [imported] - Ureaplasma urealyticum gi|6899225|gb|AAF30664.1|AE002122_33 ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827658|gb|ACA32920.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902711|gb|EDT49000.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675722|gb|EDT87627.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700675|gb|EDU18957.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 132 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 70/128 (54%), Positives = 85/128 (66%), Gaps = 7/128 (5%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57 MARI GV+IP KRVV +L YI GIG +SQ I I RV L + ++ +IR Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60 Query: 58 ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +A + Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120 Query: 114 GKGGVARK 121 K +K Sbjct: 121 RKTVANKK 128 >gi|256380570|ref|YP_003104230.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827] gi|255924873|gb|ACU40384.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827] Length = 126 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S+++ I P+ RV L + ++ ++R I Sbjct: 1 MARLAGVDLPREKRLEIALTYIFGIGRTRSKELLKATEISPDLRVKDLGDDDLAKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E+ +++EGDLRR + +I+R M++GCY GLRHRR LPVRGQRT TNARTRK K Sbjct: 61 EEHFKLEGDLRREIQADIRRKMEIGCYEGLRHRRNLPVRGQRTKTNARTRKGPKKTV 117 >gi|254302863|ref|ZP_04970221.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323055|gb|EDK88305.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 118 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|30018404|ref|NP_830035.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 14579] gi|30260326|ref|NP_842703.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames] gi|47525391|ref|YP_016740.1| 30S ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183169|ref|YP_026421.1| 30S ribosomal protein S13 [Bacillus anthracis str. Sterne] gi|49481683|ref|YP_034486.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145084|ref|YP_081745.1| 30S ribosomal protein S13 [Bacillus cereus E33L] gi|118475903|ref|YP_893054.1| 30S ribosomal protein S13 [Bacillus thuringiensis str. Al Hakam] gi|206972311|ref|ZP_03233258.1| 30S ribosomal protein S13 [Bacillus cereus AH1134] gi|218234072|ref|YP_002364984.1| 30S ribosomal protein S13 [Bacillus cereus B4264] gi|218901340|ref|YP_002449174.1| ribosomal protein S13 [Bacillus cereus AH820] gi|225862187|ref|YP_002747565.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102] gi|227812808|ref|YP_002812817.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684] gi|228912874|ref|ZP_04076521.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228919085|ref|ZP_04082464.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228925388|ref|ZP_04088484.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931637|ref|ZP_04094543.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943940|ref|ZP_04106325.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228950683|ref|ZP_04112817.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956576|ref|ZP_04118372.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228983390|ref|ZP_04143603.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229041040|ref|ZP_04189803.1| 30S ribosomal protein S13 [Bacillus cereus AH676] gi|229067900|ref|ZP_04201217.1| 30S ribosomal protein S13 [Bacillus cereus F65185] gi|229089266|ref|ZP_04220547.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42] gi|229107821|ref|ZP_04237457.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15] gi|229119797|ref|ZP_04249058.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201] gi|229125652|ref|ZP_04254684.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4] gi|229142941|ref|ZP_04271382.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24] gi|229148544|ref|ZP_04276800.1| 30S ribosomal protein S13 [Bacillus cereus m1550] gi|229153913|ref|ZP_04282043.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342] gi|229176735|ref|ZP_04304139.1| 30S ribosomal protein S13 [Bacillus cereus 172560W] gi|229182529|ref|ZP_04309780.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1] gi|229188420|ref|ZP_04315468.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876] gi|229602339|ref|YP_002864786.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248] gi|254686634|ref|ZP_05150493.1| 30S ribosomal protein S13 [Bacillus anthracis str. CNEVA-9066] gi|254726286|ref|ZP_05188068.1| 30S ribosomal protein S13 [Bacillus anthracis str. A1055] gi|254735291|ref|ZP_05192999.1| 30S ribosomal protein S13 [Bacillus anthracis str. Western North America USA6153] gi|254739483|ref|ZP_05197181.1| 30S ribosomal protein S13 [Bacillus anthracis str. Kruger B] gi|254751245|ref|ZP_05203283.1| 30S ribosomal protein S13 [Bacillus anthracis str. Vollum] gi|254756846|ref|ZP_05208874.1| 30S ribosomal protein S13 [Bacillus anthracis str. Australia 94] gi|296500968|ref|YP_003662668.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171] gi|300119552|ref|ZP_07057096.1| 30S ribosomal protein S13 [Bacillus cereus SJ1] gi|301051872|ref|YP_003790083.1| 30S ribosomal protein S13 [Bacillus anthracis CI] gi|49065839|sp|P62175|RS13_BACCR RecName: Full=30S ribosomal protein S13 gi|49065840|sp|P62176|RS13_BACAN RecName: Full=30S ribosomal protein S13 gi|81397477|sp|Q6HPN4|RS13_BACHK RecName: Full=30S ribosomal protein S13 gi|81689825|sp|Q63H66|RS13_BACCZ RecName: Full=30S ribosomal protein S13 gi|158706335|sp|A0R8K4|RS13_BACAH RecName: Full=30S ribosomal protein S13 gi|226712691|sp|B7JKE5|RS13_BACC0 RecName: Full=30S ribosomal protein S13 gi|226712693|sp|B7HJ73|RS13_BACC4 RecName: Full=30S ribosomal protein S13 gi|254811126|sp|C3P9T0|RS13_BACAA RecName: Full=30S ribosomal protein S13 gi|254811127|sp|C3LJW9|RS13_BACAC RecName: Full=30S ribosomal protein S13 gi|254811128|sp|C1ET64|RS13_BACC3 RecName: Full=30S ribosomal protein S13 gi|29893944|gb|AAP07236.1| SSU ribosomal protein S13P [Bacillus cereus ATCC 14579] gi|30253647|gb|AAP24189.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames] gi|47500539|gb|AAT29215.1| ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor'] gi|49177096|gb|AAT52472.1| ribosomal protein S13 [Bacillus anthracis str. Sterne] gi|49333239|gb|AAT63885.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978553|gb|AAU20103.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus cereus E33L] gi|118415128|gb|ABK83547.1| SSU ribosomal protein S13P [Bacillus thuringiensis str. Al Hakam] gi|206732885|gb|EDZ50060.1| 30S ribosomal protein S13 [Bacillus cereus AH1134] gi|218162029|gb|ACK62021.1| ribosomal protein S13 [Bacillus cereus B4264] gi|218535885|gb|ACK88283.1| ribosomal protein S13 [Bacillus cereus AH820] gi|225787084|gb|ACO27301.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102] gi|227003895|gb|ACP13638.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684] gi|228595094|gb|EEK52865.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876] gi|228600984|gb|EEK58553.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1] gi|228606778|gb|EEK64195.1| 30S ribosomal protein S13 [Bacillus cereus 172560W] gi|228629594|gb|EEK86291.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342] gi|228634960|gb|EEK91533.1| 30S ribosomal protein S13 [Bacillus cereus m1550] gi|228640562|gb|EEK96951.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24] gi|228657844|gb|EEL13650.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4] gi|228663698|gb|EEL19277.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201] gi|228675670|gb|EEL30878.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15] gi|228694105|gb|EEL47787.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42] gi|228715259|gb|EEL67118.1| 30S ribosomal protein S13 [Bacillus cereus F65185] gi|228727337|gb|EEL78531.1| 30S ribosomal protein S13 [Bacillus cereus AH676] gi|228776380|gb|EEM24733.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228803141|gb|EEM49963.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809034|gb|EEM55519.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228815773|gb|EEM62009.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828065|gb|EEM73793.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834310|gb|EEM79851.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228840610|gb|EEM85872.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228846810|gb|EEM91815.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266747|gb|ACQ48384.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248] gi|296322020|gb|ADH04948.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171] gi|298723024|gb|EFI63922.1| 30S ribosomal protein S13 [Bacillus cereus SJ1] gi|300374041|gb|ADK02945.1| 30S ribosomal protein S13 [Bacillus cereus biovar anthracis str. CI] Length = 121 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|296137042|ref|YP_003644284.1| 30S ribosomal protein S13 [Thiomonas intermedia K12] gi|294341219|emb|CAZ89620.1| 30S ribosomal subunit protein S13 [Thiomonas sp. 3As] gi|295797164|gb|ADG31954.1| 30S ribosomal protein S13 [Thiomonas intermedia K12] Length = 121 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++ IC+ +P +R+ L ++++ ++R+AI Sbjct: 1 MARIAGINIPPHQHSEIGLTAIYGIGRTTARAICDASGVPYNKRIKDLSDADLEKVREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK KG + Sbjct: 61 GK-LTIEGDLRREISVNIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGSITL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|227509954|ref|ZP_03940003.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512887|ref|ZP_03942936.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577] gi|227523015|ref|ZP_03953064.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290] gi|227083887|gb|EEI19199.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577] gi|227089833|gb|EEI25145.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290] gi|227190560|gb|EEI70627.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 121 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG +S+ I + + + RV L + +IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIFGIGTSTSEKILAQAGVSEDVRVRDLTPDQEDKIRAIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK GV R Sbjct: 61 S-DLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKATAGVGR 119 Query: 121 KR 122 ++ Sbjct: 120 RK 121 >gi|289435874|ref|YP_003465746.1| hypothetical protein lse_2513 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172118|emb|CBH28664.1| rpsM [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313631792|gb|EFR98972.1| 30S ribosomal protein S13 [Listeria seeligeri FSL N1-067] gi|313636144|gb|EFS02007.1| 30S ribosomal protein S13 [Listeria seeligeri FSL S4-171] Length = 121 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V +L YI+GIG +++ + + + + R L E E+ +IR+ + Sbjct: 1 MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK K + Sbjct: 61 DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVSGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|160942873|ref|ZP_02090112.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii M21/2] gi|158445774|gb|EDP22777.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii M21/2] gi|295103947|emb|CBL01491.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii SL3/3] Length = 123 Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLDEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART K + Sbjct: 61 DQANILVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|323344660|ref|ZP_08084884.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269] gi|323093930|gb|EFZ36507.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269] Length = 126 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWNDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ISAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|229170986|ref|ZP_04298587.1| 30S ribosomal protein S13 [Bacillus cereus MM3] gi|228612526|gb|EEK69747.1| 30S ribosomal protein S13 [Bacillus cereus MM3] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|172056165|ref|YP_001812625.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15] gi|226712737|sp|B1YGX5|RS13_EXIS2 RecName: Full=30S ribosomal protein S13 gi|171988686|gb|ACB59608.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L YI+G+G ++Q + + I + R +L E ++ Q+R + Sbjct: 1 MARIAGVDIPREKRIVISLTYIYGVGKTTAQKVLKEAGISEDTRTRELTEEQLNQLRDGL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQ T N+RTRK + + Sbjct: 61 DK-VKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQNTKNNSRTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|224437306|ref|ZP_03658278.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] gi|313143761|ref|ZP_07805954.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] gi|313128792|gb|EFR46409.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818] Length = 120 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 86/120 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS+DI + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILKAVNISFDKRVFDLSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|152993916|ref|YP_001359637.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1] gi|158706288|sp|A6QCS1|RS13_SULNB RecName: Full=30S ribosomal protein S13 gi|151425777|dbj|BAF73280.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1] Length = 120 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 65/119 (54%), Positives = 85/119 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +S+ I ++ I RVH+L +++ IR I Sbjct: 1 MARIAGVDLPQKKRIEYALTYIYGIGLTTSRKILDRTGIDYNTRVHELTDAQAATIRNDI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLR+ V ++IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK K A Sbjct: 61 QENVMVEGDLRKKVTLDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119 >gi|330837633|ref|YP_004412274.1| 30S ribosomal protein S13P [Spirochaeta coccoides DSM 17374] gi|329749536|gb|AEC02892.1| SSU ribosomal protein S13P [Spirochaeta coccoides DSM 17374] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 64/110 (58%), Positives = 84/110 (76%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ IC + A+ P+ R++ L ++ ++R+ I Sbjct: 1 MARIAGVDLP-NKAVKIALTYIYGIGNYSAAKICEQTAVNPDERLNNLSSEDLSKLREII 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +++VEG LR V +NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR Sbjct: 60 ENNFKVEGRLRTEVGLNIKRLMDIGCYRGLRHRKGLPVRGQRTKTNARTR 109 >gi|37528522|ref|NP_931867.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp. laumondii TTO1] gi|253991667|ref|YP_003043023.1| 30S ribosomal protein S13 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|81418034|sp|Q7MYH2|RS13_PHOLL RecName: Full=30S ribosomal protein S13 gi|36787960|emb|CAE17077.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp. laumondii TTO1] gi|253783117|emb|CAQ86282.1| 30s ribosomal subunit protein s13 [Photorhabdus asymbiotica] Length = 118 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAEHVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|282858351|ref|ZP_06267531.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010] gi|282588799|gb|EFB93924.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010] Length = 126 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|157960035|ref|YP_001500069.1| 30S ribosomal protein S13 [Shewanella pealeana ATCC 700345] gi|167626018|ref|YP_001676312.1| 30S ribosomal protein S13 [Shewanella halifaxensis HAW-EB4] gi|212634851|ref|YP_002311376.1| 30S ribosomal protein S13 [Shewanella piezotolerans WP3] gi|189044295|sp|B0TLZ1|RS13_SHEHH RecName: Full=30S ribosomal protein S13 gi|189044296|sp|A8GYZ7|RS13_SHEPA RecName: Full=30S ribosomal protein S13 gi|226712785|sp|B8CNF5|RS13_SHEPW RecName: Full=30S ribosomal protein S13 gi|157845035|gb|ABV85534.1| ribosomal protein S13 [Shewanella pealeana ATCC 700345] gi|167356040|gb|ABZ78653.1| ribosomal protein S13 [Shewanella halifaxensis HAW-EB4] gi|212556335|gb|ACJ28789.1| Ribosomal protein S13 [Shewanella piezotolerans WP3] Length = 118 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGRTRAQAICAATSIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 -ANYIVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|270291110|ref|ZP_06197333.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4] gi|304385390|ref|ZP_07367735.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284] gi|270280506|gb|EFA26341.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4] gi|304328597|gb|EFL95818.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI+GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIYGIGNTTAQKILKDADVSEDVRVRDLTADQEDKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK R Sbjct: 61 DK-YLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|323527579|ref|YP_004229732.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001] gi|323384581|gb|ADX56672.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+G+G S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + + Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|257054495|ref|YP_003132327.1| 30S ribosomal protein S13P [Saccharomonospora viridis DSM 43017] gi|256584367|gb|ACU95500.1| SSU ribosomal protein S13P [Saccharomonospora viridis DSM 43017] Length = 126 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 85/117 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+DI + P+ RV L + ++ ++R+ I Sbjct: 1 MARLAGVDLPREKRLEIALTYIYGIGRTRSKDIIAATQLNPDVRVKDLGDDDLAKLREFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E++Y+VEGDLRR V +I+R +++GCY GLR RRGLPVRGQRT TNARTRK K Sbjct: 61 EENYKVEGDLRREVNADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRKGPKKTV 117 >gi|28493497|ref|NP_787658.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist] gi|28572390|ref|NP_789170.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27] gi|54039357|sp|P66398|RS13_TROW8 RecName: Full=30S ribosomal protein S13 gi|54042127|sp|P66397|RS13_TROWT RecName: Full=30S ribosomal protein S13 gi|28410521|emb|CAD66907.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27] gi|28476539|gb|AAO44627.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist] Length = 124 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KRV L YI GIG S+ I + RV L + +++ +R I Sbjct: 1 MARVAGVDIPGNKRVEIGLTYICGIGPTRSRHALTAAGISFDTRVKDLTDDQLVALRAHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y++EGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K + + Sbjct: 61 QNSYRIEGDLRREVASDIRRKVEIGCYQGLRHRRGLPVNGQRTRTNARSSKGPRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|317049818|ref|YP_004117466.1| 30S ribosomal protein S13 [Pantoea sp. At-9b] gi|316951435|gb|ADU70910.1| 30S ribosomal protein S13 [Pantoea sp. At-9b] Length = 118 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC + I ++ +L E ++ Q+R A+ Sbjct: 1 MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|332076678|gb|EGI87140.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17545] Length = 129 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|300088172|ref|YP_003758694.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527905|gb|ADJ26373.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 129 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 66/120 (55%), Positives = 87/120 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K+VV +L YI+GIG S I ++L+I RV L E E+ ++R+ I Sbjct: 1 MARIAGVDIPRNKQVVYSLPYIYGIGPTLSARILDRLSIEKTTRVSDLTEEELNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLR+ + +N+KRL D+G YRG RHRRGLPV GQRT TNARTR+ K R Sbjct: 61 DKEYRVEGDLRKEITLNVKRLTDIGSYRGQRHRRGLPVHGQRTKTNARTRRGPRKTVAGR 120 >gi|312199995|ref|YP_004020056.1| 30S ribosomal protein S13 [Frankia sp. EuI1c] gi|311231331|gb|ADP84186.1| 30S ribosomal protein S13 [Frankia sp. EuI1c] Length = 126 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 82/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR++GV++PR KRV L YI GIG +++ + P+ RV L E EVI++R+ I Sbjct: 1 MARLSGVDLPREKRVEIGLTYIFGIGRTRAKETLVATGVNPDTRVRDLSEDEVIRLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y+VEGDL+R + +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK + Sbjct: 61 DGHYRVEGDLQREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117 >gi|323342812|ref|ZP_08083044.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463924|gb|EFY09118.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRVV +L YI+GIG +S++I K I + RV L E +V IR+ + Sbjct: 1 MARIAGIDIPRNKRVVVSLTYIYGIGLTTSKEILTKCEISEDIRVKDLTEEQVNAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +VEGDLRR V +NIKRLM++G RG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 ES-IKVEGDLRREVNLNIKRLMEIGSNRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300362366|ref|ZP_07058542.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03] gi|300353357|gb|EFJ69229.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03] Length = 115 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC I + R + L + ++R + Sbjct: 1 MARIAGVDLPRNKRVVVALTYIYGIGESTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKGSKR 114 >gi|125717010|ref|YP_001034143.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK36] gi|323350963|ref|ZP_08086621.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66] gi|158706286|sp|A3CK88|RS13_STRSV RecName: Full=30S ribosomal protein S13 gi|125496927|gb|ABN43593.1| 30S ribosomal protein S13, putative [Streptococcus sanguinis SK36] gi|322122945|gb|EFX94651.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66] gi|324989979|gb|EGC21920.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK353] gi|324991838|gb|EGC23763.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK405] gi|324996272|gb|EGC28180.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK678] gi|325686428|gb|EGD28458.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK72] gi|325689208|gb|EGD31214.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK115] gi|325695787|gb|EGD37684.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK150] gi|325697999|gb|EGD39882.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK160] gi|327458454|gb|EGF04810.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1] gi|327463699|gb|EGF10015.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1057] gi|327467358|gb|EGF12858.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK330] gi|327471719|gb|EGF17160.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK408] gi|327490440|gb|EGF22222.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1058] gi|328945194|gb|EGG39348.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1087] Length = 121 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I + + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTIEQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|119478110|ref|ZP_01618189.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143] gi|119448816|gb|EAW30059.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143] Length = 118 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+GIG S++ +C + + ++ L E ++ +R I Sbjct: 1 MARIAGVNIPDHKHAVISLTYIYGIGRPSAKQLCAATGVAEDIKIGALNEEQLDSLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRL+DLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-MSVEGDLRRQVSMNIKRLLDLGCYRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116 >gi|227115250|ref|ZP_03828906.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328927|ref|ZP_03832951.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum WPP14] gi|253690161|ref|YP_003019351.1| ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494686|sp|C6DFS6|RS13_PECCP RecName: Full=30S ribosomal protein S13 gi|251756739|gb|ACT14815.1| ribosomal protein S13 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 118 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|257069482|ref|YP_003155737.1| 30S ribosomal protein S13P [Brachybacterium faecium DSM 4810] gi|256560300|gb|ACU86147.1| SSU ribosomal protein S13P [Brachybacterium faecium DSM 4810] Length = 124 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + + + + RV ++ + + +++R + Sbjct: 1 MARLVGVDLPREKRIEVALTYIFGVGRSRALETLAATGVSGDLRVREVSDEDFVKLRDHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK + + Sbjct: 61 EANYMVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|292489827|ref|YP_003532717.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430] gi|292900869|ref|YP_003540238.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC 49946] gi|291200717|emb|CBJ47850.1| 30S ribosomal subunit protein S13 [Erwinia amylovora ATCC 49946] gi|291555264|emb|CBA23545.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430] gi|312174009|emb|CBX82262.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC BAA-2158] Length = 118 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|16766707|ref|NP_462322.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56415337|ref|YP_152412.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|157148873|ref|YP_001456192.1| 30S ribosomal protein S13 [Citrobacter koseri ATCC BAA-895] gi|168264700|ref|ZP_02686673.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168468024|ref|ZP_02701861.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194445617|ref|YP_002042669.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449228|ref|YP_002047442.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471891|ref|ZP_03077875.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738391|ref|YP_002116361.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251517|ref|YP_002148338.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265972|ref|ZP_03166046.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364267|ref|YP_002143904.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198245668|ref|YP_002217381.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200386749|ref|ZP_03213361.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354954|ref|YP_002228755.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858660|ref|YP_002245311.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913867|ref|ZP_04657704.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25009167|sp|Q8ZLM1|RS13_SALTY RecName: Full=30S ribosomal protein S13 gi|81361068|sp|Q5PK07|RS13_SALPA RecName: Full=30S ribosomal protein S13 gi|16421974|gb|AAL22281.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56129594|gb|AAV79100.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|157086078|gb|ABV15756.1| hypothetical protein CKO_04711 [Citrobacter koseri ATCC BAA-895] gi|194404280|gb|ACF64502.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407532|gb|ACF67751.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458255|gb|EDX47094.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713893|gb|ACF93114.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195628910|gb|EDX48320.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095744|emb|CAR61314.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215220|gb|ACH52617.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244227|gb|EDY26847.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197940184|gb|ACH77517.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603847|gb|EDZ02392.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274735|emb|CAR39791.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205346873|gb|EDZ33504.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710463|emb|CAR34821.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261248575|emb|CBG26413.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995627|gb|ACY90512.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159961|emb|CBW19480.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914441|dbj|BAJ38415.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087863|emb|CBY97626.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615041|gb|EFY11965.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322617328|gb|EFY14229.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625550|gb|EFY22375.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626392|gb|EFY23201.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632096|gb|EFY28849.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635025|gb|EFY31748.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643274|gb|EFY39841.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646642|gb|EFY43149.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649988|gb|EFY46407.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652705|gb|EFY49045.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659538|gb|EFY55782.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665520|gb|EFY61707.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670414|gb|EFY66553.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670487|gb|EFY66621.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675063|gb|EFY71146.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681600|gb|EFY77629.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685944|gb|EFY81933.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716409|gb|EFZ07980.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131776|gb|ADX19206.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195814|gb|EFZ80987.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196430|gb|EFZ81581.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202331|gb|EFZ87376.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207320|gb|EFZ92270.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211244|gb|EFZ96089.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216047|gb|EGA00778.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223462|gb|EGA07790.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226808|gb|EGA10998.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231830|gb|EGA15940.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233217|gb|EGA17312.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237284|gb|EGA21349.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245519|gb|EGA29518.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249025|gb|EGA32947.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250648|gb|EGA34529.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256877|gb|EGA40591.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263026|gb|EGA46573.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266026|gb|EGA49521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272783|gb|EGA56186.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326630103|gb|EGE36446.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 118 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|145636642|ref|ZP_01792309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH] gi|145270168|gb|EDK10104.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH] Length = 118 Score = 167 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICVAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|325972639|ref|YP_004248830.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy] gi|324027877|gb|ADY14636.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy] Length = 121 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ +IC K I P+ ++ L ++ +R+ I Sbjct: 1 MARIAGVDLP-NKAVKIALTYIYGIGRFSAVEICEKTNINPDTNINTLSSEDLAVLRKVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E++Y+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPV GQRT TNARTR Sbjct: 60 EEEYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVHGQRTKTNARTR 109 >gi|167973083|ref|ZP_02555360.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974840|ref|ZP_02557117.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167975997|ref|ZP_02558274.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988496|ref|ZP_02570167.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362009|ref|ZP_02695188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867601|ref|ZP_03079603.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273653|ref|ZP_03206188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554322|ref|YP_002284654.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550772|ref|ZP_03771721.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551259|ref|ZP_03772205.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226712802|sp|B5ZB64|RS13_UREU1 RecName: Full=30S ribosomal protein S13 gi|171903351|gb|EDT49640.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209077|gb|EDU06120.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018818|gb|EDU56858.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997752|gb|EDU66849.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659696|gb|EDX53076.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660658|gb|EDX53913.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249681|gb|EDY74462.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541823|gb|ACI60052.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379074|gb|EEH01439.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379926|gb|EEH02288.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 132 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 7/128 (5%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57 MARI GV+IP KRVV +L YI GIG +SQ I I RV+ L + ++ +IR Sbjct: 1 MARILGVDIPNDKRVVISLTYIFGIGKSTSQKILKLANIDENIRVNDLADEQIAEIRRVA 60 Query: 58 ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +A + Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK Sbjct: 61 LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120 Query: 114 GKGGVARK 121 K +K Sbjct: 121 RKTVANKK 128 >gi|313112853|ref|ZP_07798499.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624758|gb|EFQ08067.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii KLE1255] Length = 123 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART K + Sbjct: 61 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|91785442|ref|YP_560648.1| 30S ribosomal protein S13 [Burkholderia xenovorans LB400] gi|170695704|ref|ZP_02886846.1| ribosomal protein S13 [Burkholderia graminis C4D1M] gi|296163298|ref|ZP_06846059.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1] gi|307731232|ref|YP_003908456.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003] gi|123358403|sp|Q13TJ3|RS13_BURXL RecName: Full=30S ribosomal protein S13 gi|91689396|gb|ABE32596.1| SSU ribosomal protein S13P [Burkholderia xenovorans LB400] gi|170139309|gb|EDT07495.1| ribosomal protein S13 [Burkholderia graminis C4D1M] gi|295886437|gb|EFG66294.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1] gi|307585767|gb|ADN59165.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003] Length = 121 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+GIG S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + + Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|167626785|ref|YP_001677285.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667365|ref|ZP_04754943.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254875915|ref|ZP_05248625.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189044265|sp|B0U0W8|RS13_FRAP2 RecName: Full=30S ribosomal protein S13 gi|158523429|gb|ABW70827.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167596786|gb|ABZ86784.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254841936|gb|EET20350.1| 30S ribosomal protein S13 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 118 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 1/119 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I+GIG +Q IC + P ++ L E ++ +R + Sbjct: 1 MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQSCKVDPTVKIKDLSEEQIETLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK K A Sbjct: 61 AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118 >gi|269959710|ref|ZP_06174090.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3] gi|269835633|gb|EEZ89712.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3] Length = 118 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|239618240|ref|YP_002941562.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1] gi|259494683|sp|C5CGH7|RS13_KOSOT RecName: Full=30S ribosomal protein S13 gi|239507071|gb|ACR80558.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1] Length = 121 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 82/121 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL YI+GIG +++I I ++RV L + E+ +I + I Sbjct: 1 MARIVGVELPNNKKTFVALTYIYGIGPARAKEILKNTNIDGDKRVKDLTDEEISRISKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y+VEG+LR+ V NIKRL+++GCYRG+RH+ GLPVRGQ+TH+NARTRK + + Sbjct: 61 TDHYKVEGELRQEVERNIKRLIEIGCYRGIRHKIGLPVRGQKTHSNARTRKGPRASRIKK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|13507928|ref|NP_109877.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae M129] gi|2500457|sp|Q50297|RS13_MYCPN RecName: Full=30S ribosomal protein S13 gi|1215699|gb|AAC43692.1| RpsM [Mycoplasma pneumoniae] gi|1674347|gb|AAB96290.1| ribosomal protein S13 [Mycoplasma pneumoniae M129] gi|301633191|gb|ADK86745.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae FH] Length = 124 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KR+ AL YI GIG SQ I + I P++RV L E E + IR + Sbjct: 1 MARILGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFVAIRN-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EGDLRR +A+NIK L ++G +RGLRHR+ LPVRGQRT TNARTRK K + Sbjct: 60 ASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRTNARTRKGPRKTVANK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|310659477|ref|YP_003937198.1| 30S ribosomal protein S13 [Clostridium sticklandii DSM 519] gi|308826255|emb|CBH22293.1| 30S ribosomal subunit protein S13 [Clostridium sticklandii] Length = 122 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV+ L YI GIG +S I + I R+ L E EV +R+ I Sbjct: 1 MARIAGVDLPREKRVIIGLTYIFGIGKNTSAQILSATGINESTRIKDLTEEEVNLLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK + + Sbjct: 61 D-NYNVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRKGPKRTVGRK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|291619153|ref|YP_003521895.1| RpsM [Pantoea ananatis LMG 20103] gi|304399268|ref|ZP_07381134.1| 30S ribosomal protein S13 [Pantoea sp. aB] gi|308188334|ref|YP_003932465.1| 30S ribosomal protein S13 [Pantoea vagans C9-1] gi|291154183|gb|ADD78767.1| RpsM [Pantoea ananatis LMG 20103] gi|304353194|gb|EFM17575.1| 30S ribosomal protein S13 [Pantoea sp. aB] gi|308058844|gb|ADO11016.1| 30S ribosomal protein S13 [Pantoea vagans C9-1] gi|327395482|dbj|BAK12904.1| 30S ribosomal protein S13 RpsM [Pantoea ananatis AJ13355] Length = 118 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC I ++ +L E ++ Q+R A+ Sbjct: 1 MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICASTGIAENVKISELSEEQIDQLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|295101436|emb|CBK98981.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii L2-6] Length = 123 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y++GIG ++ I I P+ RV L E +IR I Sbjct: 1 MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILAATGINPDTRVKDLTLEEEAKIRDYI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + VEGDLRR VA++IKRL+++ +RG RHR+ LP RGQRT TNART K + Sbjct: 61 DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|227894544|ref|ZP_04012349.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047] gi|227863703|gb|EEJ71124.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047] Length = 116 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|301168434|emb|CBW28024.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ] Length = 127 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 82/121 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IPR K V AL I+G+G K ++++ K I + + L E E IR + Sbjct: 1 MARILGVDIPRNKVVTVALRSIYGVGPKVAEEVLTKAGIDLNKNSNDLTEEEANNIRLLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR + +NIKRL DLGCYRG+RHR+GLPVRGQRT TNARTRK K + Sbjct: 61 EGEYTVEGDLRRQIGLNIKRLKDLGCYRGIRHRKGLPVRGQRTSTNARTRKGPAKAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|283768439|ref|ZP_06341351.1| 30S ribosomal protein S13 [Bulleidia extructa W1219] gi|283104831|gb|EFC06203.1| 30S ribosomal protein S13 [Bulleidia extructa W1219] Length = 121 Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+IPR K + +L YI+GIG +++ I + I P R +L + + IR + Sbjct: 1 MPRIAGVDIPRHKVIGISLTYIYGIGPTTAKKILEECGIDPSTRTSELTDEQETAIRSKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR A++IKRLM++G YRG RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DS-VKTEGDLRRDTALDIKRLMEIGSYRGTRHRRGLPVRGQRTKTNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261823210|ref|YP_003261316.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163] gi|261607223|gb|ACX89709.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163] Length = 118 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|188535256|ref|YP_001909053.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99] gi|259909978|ref|YP_002650334.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96] gi|226712736|sp|B2VK74|RS13_ERWT9 RecName: Full=30S ribosomal protein S13 gi|188030298|emb|CAO98187.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99] gi|224965600|emb|CAX57132.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96] gi|283480076|emb|CAY75992.1| 30S ribosomal protein S13 [Erwinia pyrifoliae DSM 12163] gi|310765576|gb|ADP10526.1| 30S ribosomal protein S13 [Erwinia sp. Ejp617] Length = 118 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|52840596|ref|YP_094395.1| 30S ribosomal protein S13 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54293343|ref|YP_125758.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens] gi|54296387|ref|YP_122756.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris] gi|148361033|ref|YP_001252240.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby] gi|296105899|ref|YP_003617599.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99 Alcoy] gi|81369315|sp|Q5WZJ0|RS13_LEGPL RecName: Full=30S ribosomal protein S13 gi|81371222|sp|Q5X837|RS13_LEGPA RecName: Full=30S ribosomal protein S13 gi|81378213|sp|Q5ZYM1|RS13_LEGPH RecName: Full=30S ribosomal protein S13 gi|158706243|sp|A5IHP4|RS13_LEGPC RecName: Full=30S ribosomal protein S13 gi|52627707|gb|AAU26448.1| 30S ribosomal protein S13 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750172|emb|CAH11564.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris] gi|53753175|emb|CAH14622.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens] gi|148282806|gb|ABQ56894.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby] gi|295647800|gb|ADG23647.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99 Alcoy] gi|307609159|emb|CBW98615.1| 30S ribosomal protein S13 [Legionella pneumophila 130b] Length = 118 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 72/119 (60%), Positives = 85/119 (71%), Gaps = 1/119 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV AL I+GIG +S +C + I P +V QL ++++ +R I Sbjct: 1 MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCKTVDIDPSVKVSQLSDAQLESLRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + VEGDLRR V MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK KG + Sbjct: 61 AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKGTSS 118 >gi|42561248|ref|NP_975699.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400483|sp|Q6MSP7|RS13_MYCMS RecName: Full=30S ribosomal protein S13 gi|42492746|emb|CAE77341.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321045|gb|ADK69688.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 121 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+ EG LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K K + Sbjct: 61 SK-YKTEGKLRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|229815746|ref|ZP_04446071.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM 13280] gi|229808662|gb|EEP44439.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM 13280] Length = 124 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR L YI+GIG ++ +C L I R+ L E ++ IR I Sbjct: 1 MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q+ VEGDLRR + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK + A Sbjct: 61 DQNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGA 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|261250395|ref|ZP_05942970.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891] gi|260938964|gb|EEX94951.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891] Length = 118 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELSEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|239818006|ref|YP_002946916.1| ribosomal protein S13 [Variovorax paradoxus S110] gi|319796383|ref|YP_004158023.1| 30S ribosomal protein s13 [Variovorax paradoxus EPS] gi|259494694|sp|C5CQ78|RS13_VARPS RecName: Full=30S ribosomal protein S13 gi|239804583|gb|ACS21650.1| ribosomal protein S13 [Variovorax paradoxus S110] gi|315598846|gb|ADU39912.1| 30S ribosomal protein S13 [Variovorax paradoxus EPS] Length = 121 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I GIG ++ IC I +++ L ++++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIFGIGRTRARQICEASGIEYSKKIKDLTDADLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 -ALFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|146298138|ref|YP_001192729.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101] gi|189040502|sp|A5FN18|RS13_FLAJO RecName: Full=30S ribosomal protein S13 gi|146152556|gb|ABQ03410.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101] Length = 124 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + +I K + +++V + E+ IR A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGLGKSRAIEILEKAQVSQDKKVQDWNDDEIGAIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 S-FYKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|42518453|ref|NP_964383.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533] gi|116628986|ref|YP_814158.1| 30S ribosomal protein S13 [Lactobacillus gasseri ATCC 33323] gi|227888829|ref|ZP_04006634.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200] gi|238853459|ref|ZP_04643837.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4] gi|268318875|ref|YP_003292531.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785] gi|282852673|ref|ZP_06262015.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1] gi|311111216|ref|ZP_07712613.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22] gi|81668269|sp|Q74L66|RS13_LACJO RecName: Full=30S ribosomal protein S13 gi|122274016|sp|Q046A2|RS13_LACGA RecName: Full=30S ribosomal protein S13 gi|41582738|gb|AAS08349.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533] gi|116094568|gb|ABJ59720.1| SSU ribosomal protein S13P [Lactobacillus gasseri ATCC 33323] gi|227850666|gb|EEJ60752.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200] gi|238833899|gb|EEQ26158.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4] gi|262397250|emb|CAX66264.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785] gi|282556415|gb|EFB62035.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1] gi|311066370|gb|EFQ46710.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22] gi|329666716|gb|AEB92664.1| 30S ribosomal protein S13 [Lactobacillus johnsonii DPC 6026] Length = 115 Score = 167 bits (424), Expect = 4e-40, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG +++ IC I + R + L + ++R + Sbjct: 1 MARIAGVDLPRNKRVVVALTYIYGIGEPTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKGSKR 114 >gi|83319525|ref|YP_424636.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|313665553|ref|YP_004047424.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50] gi|91207706|sp|Q2SRH7|RS13_MYCCT RecName: Full=30S ribosomal protein S13 gi|83283411|gb|ABC01343.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|312950018|gb|ADR24614.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50] Length = 121 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP KRVV +L YI+GIG ++Q + L I + RV L E ++ I I Sbjct: 1 MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISIEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K K + Sbjct: 61 SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|307565118|ref|ZP_07627626.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A] gi|307346149|gb|EFN91478.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A] Length = 126 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDEQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|281423815|ref|ZP_06254728.1| 30S ribosomal protein S13 [Prevotella oris F0302] gi|299141171|ref|ZP_07034308.1| 30S ribosomal protein S13 [Prevotella oris C735] gi|281402042|gb|EFB32873.1| 30S ribosomal protein S13 [Prevotella oris F0302] gi|298577131|gb|EFI49000.1| 30S ribosomal protein S13 [Prevotella oris C735] Length = 126 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|258543841|ref|ZP_05704075.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826] gi|258520930|gb|EEV89789.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG ++DIC + P +++ L ++EV +R A+ Sbjct: 1 MARIAGINVPTQKHTVIALTSIYGIGPTRARDICVAAKVEPSKKIRDLSDAEVDALRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + YQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK + Sbjct: 61 AE-YQVEGDLRRQVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRRPI 116 >gi|255536131|ref|YP_003096502.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium 3519-10] gi|255342327|gb|ACU08440.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium 3519-10] Length = 125 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR V L YI+GIG +S +I I +++V++ + E+ IR I Sbjct: 1 MARISGIDLPKNKRGVIGLTYIYGIGRSTSSEILKAAGISEDKKVNEWNDDELALIRNFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEG+LR +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 TENIKVEGELRSETQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86141163|ref|ZP_01059709.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217] gi|85831722|gb|EAQ50177.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217] Length = 124 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q I + + +V++ + ++ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAQKILAQADVDENLKVNEWDDDQIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR V+M+IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GS-YKIEGELRSEVSMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116334245|ref|YP_795772.1| 30S ribosomal protein S13 [Lactobacillus brevis ATCC 367] gi|122269073|sp|Q03PY1|RS13_LACBA RecName: Full=30S ribosomal protein S13 gi|116099592|gb|ABJ64741.1| SSU ribosomal protein S13P [Lactobacillus brevis ATCC 367] Length = 121 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++PR KR+ L YI GIG ++ I +P + RV L + ++R + Sbjct: 1 MPRIAGVDLPRDKRIAYGLTYIFGIGINTAHKIVADAGVPEDVRVRDLTPDQEDKVRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y+VEGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YKVEGDLRREVSLNIKNLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|304413167|ref|ZP_07394640.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola LSR1] gi|304284010|gb|EFL92403.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola LSR1] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC + ++ +L E E+ ++R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTGAQKICGAAGVAESVKISELSEEEINKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YPIEGDLRRQVTLNIKRLIDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKAI 116 >gi|71894586|ref|YP_278694.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53] gi|91207707|sp|Q4A5I8|RS13_MYCS5 RecName: Full=30S ribosomal protein S13 gi|71851374|gb|AAZ43983.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53] Length = 122 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV +L YI+GIG + +IC K + + +L E+++ ++R+ + Sbjct: 1 MARILNIEIPNNKRVVISLTYIYGIGKSLASEICKKANVDENTKTAELTEAQLSKLRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR V +NIKR M++ CYRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKAYTTEGDLRREVTLNIKRYMEIKCYRGIRHRKGLPVRGQSTQKNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|281422228|ref|ZP_06253227.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205] gi|281403733|gb|EFB34413.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205] Length = 126 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWSDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|117619798|ref|YP_854864.1| 30S ribosomal protein S13 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|145300913|ref|YP_001143754.1| 30S ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida A449] gi|330827904|ref|YP_004390856.1| 30S ribosomal protein S13 [Aeromonas veronii B565] gi|158706212|sp|A0KF42|RS13_AERHH RecName: Full=30S ribosomal protein S13 gi|158706213|sp|A4SSY4|RS13_AERS4 RecName: Full=30S ribosomal protein S13 gi|117561205|gb|ABK38153.1| ribosomal protein S13p/S18e [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|142853685|gb|ABO92006.1| ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida A449] gi|328803040|gb|AEB48239.1| 30S ribosomal protein S13 [Aeromonas veronii B565] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ IC I ++ L E+++ +R+ + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGRTRSKAICAAAGIAENVKIKDLDEAQIESLREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRRQISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKAI 116 >gi|304310037|ref|YP_003809635.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1] gi|301795770|emb|CBL43969.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++Q IC+ + I PE ++ L E+++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAQSICSAVGIDPEVKIKDLAEAKLDEVRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y EGDLRR ++M+IKRL DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YTTEGDLRREISMSIKRLTDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKQI 116 >gi|229083455|ref|ZP_04215803.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44] gi|228699888|gb|EEL52525.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44] Length = 121 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + + E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGVSEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|170769485|ref|ZP_02903938.1| ribosomal protein S13p [Escherichia albertii TW07627] gi|331674804|ref|ZP_08375561.1| 30S ribosomal protein S13 [Escherichia coli TA280] gi|170121542|gb|EDS90473.1| ribosomal protein S13p [Escherichia albertii TW07627] gi|331067713|gb|EGI39111.1| 30S ribosomal protein S13 [Escherichia coli TA280] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|291514965|emb|CBK64175.1| SSU ribosomal protein S13P [Alistipes shahii WAL 8301] Length = 126 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I I + +V + ++ IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILETAGISYDLKVQDWSDDQIGAIRSTI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 ADLGLKVEGECRSMVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|255319793|ref|ZP_05360998.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82] gi|262380326|ref|ZP_06073480.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164] gi|255303112|gb|EET82324.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82] gi|262297772|gb|EEY85687.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAAGITPTVKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|229496152|ref|ZP_04389872.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406] gi|229316730|gb|EEN82643.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406] Length = 126 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI GIG + I +K I +V + + QIR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIFGIGRSRAAYILDKAGIDRNIKVKDWSDDQAAQIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGSEFKVEGDLRSEVQLNIKRLMDIGCYRGIRHRAGLPVRGQSTKNNARTRKG 113 >gi|116493139|ref|YP_804874.1| 30S ribosomal protein S13 [Pediococcus pentosaceus ATCC 25745] gi|122265397|sp|Q03EE0|RS13_PEDPA RecName: Full=30S ribosomal protein S13 gi|116103289|gb|ABJ68432.1| SSU ribosomal protein S13P [Pediococcus pentosaceus ATCC 25745] Length = 121 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V L YI GIG ++Q I + + RV L + +IR + Sbjct: 1 MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILKDAEVSEDIRVRDLTADQEDKIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK R Sbjct: 61 D-NYLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|307823463|ref|ZP_07653692.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96] gi|307735448|gb|EFO06296.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G +++ +IC ++ I P ++ +L E ++ IR + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGRQTASEICVEVGITPSIKIKELTEEQLEAIRNVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K Sbjct: 61 SK-MTVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|229077435|ref|ZP_04210086.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2] gi|228705885|gb|EEL58220.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2] Length = 127 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|28897053|ref|NP_796658.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633] gi|149192391|ref|ZP_01870592.1| 30S ribosomal protein S13 [Vibrio shilonii AK1] gi|260361371|ref|ZP_05774436.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030] gi|260779481|ref|ZP_05888371.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC BAA-450] gi|260877971|ref|ZP_05890326.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034] gi|260903549|ref|ZP_05911944.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037] gi|323492141|ref|ZP_08097303.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546] gi|323495526|ref|ZP_08100600.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326] gi|32363283|sp|Q87SZ2|RS13_VIBPA RecName: Full=30S ribosomal protein S13 gi|28805261|dbj|BAC58542.1| ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633] gi|148833782|gb|EDL50818.1| 30S ribosomal protein S13 [Vibrio shilonii AK1] gi|260604290|gb|EEX30594.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC BAA-450] gi|308089753|gb|EFO39448.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034] gi|308109061|gb|EFO46601.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037] gi|308114566|gb|EFO52106.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030] gi|323313702|gb|EGA66804.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546] gi|323319407|gb|EGA72344.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326] gi|328471856|gb|EGF42733.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus 10329] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|118595313|ref|ZP_01552660.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181] gi|118441091|gb|EAV47718.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181] Length = 118 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K AL I GIG ++Q IC + + ++ L ES V +IR I Sbjct: 1 MARIAGVNVPDNKHAEIALTAIFGIGKVTAQKICAAVGVSQSTKIKDLDESAVEKIRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E+ + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQ T NARTRK + Sbjct: 61 EK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQNTKNNARTRKGPVRAI 116 >gi|325981827|ref|YP_004294229.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212] gi|325531346|gb|ADZ26067.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212] Length = 119 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 84/120 (70%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + AL I+GIG SS D+C + I + ++ L E ++ IR + Sbjct: 1 MARIAGVNIPNHKHIGIALTSIYGIGRTSSTDLCKAVGIDIDIKLKDLSEDQIELIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K AR Sbjct: 61 SK-LTIEGDLRREISMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAIRAR 119 >gi|288803957|ref|ZP_06409380.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18] gi|302345098|ref|YP_003813451.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845] gi|288333590|gb|EFC72042.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18] gi|302149822|gb|ADK96084.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845] Length = 126 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|270264351|ref|ZP_06192617.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13] gi|270041487|gb|EFA14585.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13] Length = 118 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|237751465|ref|ZP_04581945.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879] gi|229372831|gb|EEO23222.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879] Length = 120 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG KSS+DI N ++I ++RVH L E ++ +I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILNAVSISFDKRVHDLSEDDISKISKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|171462902|ref|YP_001797015.1| ribosomal protein S13 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226712774|sp|B1XSS4|RS13_POLNS RecName: Full=30S ribosomal protein S13 gi|171192440|gb|ACB43401.1| ribosomal protein S13 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 121 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + V L I GIG + IC + +++V L+++++ ++R + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIFGIGTTRAHQICKTTGVAIDKKVKDLIDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR V M+IKRLMDLGCYRG+RHR+ LPVRGQRT TNARTRK K GV Sbjct: 61 GK-FVTEGDLRREVTMSIKRLMDLGCYRGVRHRKDLPVRGQRTKTNARTRKGPRKSGVQL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|259500916|ref|ZP_05743818.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335] gi|302190631|ref|ZP_07266885.1| 30S ribosomal protein S13 [Lactobacillus iners AB-1] gi|309803620|ref|ZP_07697710.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d] gi|309804981|ref|ZP_07699039.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c] gi|309806699|ref|ZP_07700694.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b] gi|309808456|ref|ZP_07702355.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a] gi|309809065|ref|ZP_07702938.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D] gi|312871219|ref|ZP_07731317.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a] gi|312872776|ref|ZP_07732841.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1] gi|312874098|ref|ZP_07734133.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d] gi|312874881|ref|ZP_07734900.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b] gi|315654002|ref|ZP_07906918.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195] gi|325912347|ref|ZP_08174743.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D] gi|325913206|ref|ZP_08175575.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B] gi|329920624|ref|ZP_08277311.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G] gi|259167610|gb|EEW52105.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335] gi|308164218|gb|EFO66475.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d] gi|308165741|gb|EFO67966.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c] gi|308166879|gb|EFO69063.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b] gi|308168284|gb|EFO70403.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a] gi|308170510|gb|EFO72530.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D] gi|311089626|gb|EFQ48051.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b] gi|311090438|gb|EFQ48847.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d] gi|311091818|gb|EFQ50197.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1] gi|311093233|gb|EFQ51579.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a] gi|315488698|gb|EFU78344.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195] gi|325475818|gb|EGC78988.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D] gi|325477470|gb|EGC80613.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B] gi|328935882|gb|EGG32342.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G] Length = 116 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 59/112 (52%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEPTAKVICEAAGVSEDVRTSDLTPEQQEKLRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 ++ ++VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DK-FRVEGDLRREVNLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKG 111 >gi|225010539|ref|ZP_03701010.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C] gi|225005368|gb|EEG43319.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C] Length = 124 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGRTRAKEILIAAGVSEDTKVSDWNDDEISKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRTGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|127511114|ref|YP_001092311.1| 30S ribosomal protein S13 [Shewanella loihica PV-4] gi|158706276|sp|A3Q9A4|RS13_SHELP RecName: Full=30S ribosomal protein S13 gi|126636409|gb|ABO22052.1| SSU ribosomal protein S13P [Shewanella loihica PV-4] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGLTRAQQICAATSIAEDAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|315037554|ref|YP_004031122.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112] gi|325956027|ref|YP_004286637.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC] gi|312275687|gb|ADQ58327.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112] gi|325332592|gb|ADZ06500.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC] gi|327182850|gb|AEA31297.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1118] Length = 116 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDTTAKKICADAGVSEDVRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|260061920|ref|YP_003195000.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501] gi|88786053|gb|EAR17222.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501] Length = 124 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +++I K + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAKEILEKAKVDEDTKVSDWSDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GE-FTIEGELRSETQINIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|237736195|ref|ZP_04566676.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817] gi|229421748|gb|EEO36795.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E EV +IR + Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILTEAGINFDTRVKDLTEEEVNKIRAIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 ET-IKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|332042698|gb|EGI78898.1| 30S ribosomal protein S13 [Lacinutrix algicola 5H-3-7-4] Length = 123 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI+G+G +Q+I + +V + ++ IR+ + Sbjct: 1 MARIAGVDIPKNKRGVIALTYIYGVGRSRAQEILATAKVDESIKVQDWTDDQIGAIRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GT-FTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|86148806|ref|ZP_01067073.1| 30S ribosomal protein S13 [Vibrio sp. MED222] gi|148982229|ref|ZP_01816655.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3] gi|218710727|ref|YP_002418348.1| 30S ribosomal protein S13 [Vibrio splendidus LGP32] gi|85833396|gb|EAQ51587.1| 30S ribosomal protein S13 [Vibrio sp. MED222] gi|145960591|gb|EDK25944.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3] gi|218323746|emb|CAV20100.1| ribosomal protein S13 [Vibrio splendidus LGP32] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|313158274|gb|EFR57676.1| 30S ribosomal protein S13 [Alistipes sp. HGB5] Length = 126 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I I + +V + ++ IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILEVAGISYDLKVQDWSDDQIGAIRSTI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 ADMGIKVEGECRSAVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|295135679|ref|YP_003586355.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87] gi|294983694|gb|ADF54159.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87] Length = 124 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q+I + + ++V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGKSRAQEILAEAKVDESKKVSDWNDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y +EG+LR V M+IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 G-NYTIEGELRTEVQMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|317494320|ref|ZP_07952734.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917570|gb|EFV38915.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|256844453|ref|ZP_05549939.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN] gi|262047175|ref|ZP_06020133.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US] gi|293380400|ref|ZP_06626471.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1] gi|295692183|ref|YP_003600793.1| 30S ribosomal protein s13 [Lactobacillus crispatus ST1] gi|256613531|gb|EEU18734.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN] gi|260572420|gb|EEX28982.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US] gi|290923083|gb|EFE00015.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1] gi|295030289|emb|CBL49768.1| 30S ribosomal protein S13 [Lactobacillus crispatus ST1] Length = 116 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|254495734|ref|ZP_05108649.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12] gi|254355047|gb|EET13667.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 71/118 (60%), Positives = 84/118 (71%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV AL I+GIG +S +C+ + I P +V QL ++++ R I Sbjct: 1 MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCSTVGIDPSTKVSQLTDAQLEAFRTEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK KG Sbjct: 61 AK-ITVEGDLRRVITMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKGTT 117 >gi|288942050|ref|YP_003444290.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180] gi|288897422|gb|ADC63258.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V AL I+GIG + IC+ I +V L E EV ++R + Sbjct: 1 MARIAGVNIPDKKHAVIALTAIYGIGRTRAGLICDAAGIARTTKVQSLTEEEVDKLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK + Sbjct: 61 AK-YSVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRKGPRRPI 116 >gi|19704621|ref|NP_604183.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296329032|ref|ZP_06871538.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|32363351|sp|Q8RE41|RS13_FUSNN RecName: Full=30S ribosomal protein S13 gi|19714921|gb|AAL95482.1| SSU ribosomal protein S13P [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296153836|gb|EFG94648.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ I + I + RV L E E+ +IR+ I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEINKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +D +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|301628939|ref|XP_002943606.1| PREDICTED: 30S ribosomal protein S13-like [Xenopus (Silurana) tropicalis] Length = 121 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPHKHAEIGLTAIYGIGRTRARKICEACGIEYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK KG A Sbjct: 61 AR-LTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|123444076|ref|YP_001008046.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238752669|ref|ZP_04614140.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380] gi|238754194|ref|ZP_04615552.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473] gi|238758782|ref|ZP_04619956.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236] gi|238783186|ref|ZP_04627212.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970] gi|238788890|ref|ZP_04632680.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641] gi|238792957|ref|ZP_04636587.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909] gi|238797221|ref|ZP_04640722.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969] gi|332163239|ref|YP_004299816.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|158706295|sp|A1JS04|RS13_YERE8 RecName: Full=30S ribosomal protein S13 gi|122091037|emb|CAL13920.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|238703079|gb|EEP95622.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236] gi|238707690|gb|EEQ00050.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473] gi|238709096|gb|EEQ01343.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380] gi|238715982|gb|EEQ07968.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970] gi|238718858|gb|EEQ10673.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969] gi|238722917|gb|EEQ14567.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641] gi|238727811|gb|EEQ19335.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909] gi|318607723|emb|CBY29221.1| SSU ribosomal protein S13p (S18e) [Yersinia enterocolitica subsp. palearctica Y11] gi|325667469|gb|ADZ44113.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861832|emb|CBX72003.1| 30S ribosomal protein S13 [Yersinia enterocolitica W22703] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|326803056|ref|YP_004320874.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a] gi|326650287|gb|AEA00470.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a] Length = 121 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L YI GIG +++ IC + + RV L E+ ++R+ + Sbjct: 1 MARIAGVDIPRDKRVVISLTYIFGIGKATAEKICEACDVDQDTRVRDLTNDELDRLRKEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR + M+IKRL ++G YRG+RHRRGLPVRGQ T NARTRK +A+ Sbjct: 61 DK-IKVEGDLRRDINMDIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKRGLAIAK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|187925593|ref|YP_001897235.1| 30S ribosomal protein S13 [Burkholderia phytofirmans PsJN] gi|226712709|sp|B2T728|RS13_BURPP RecName: Full=30S ribosomal protein S13 gi|187716787|gb|ACD18011.1| ribosomal protein S13 [Burkholderia phytofirmans PsJN] Length = 121 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP + L I+G+G S+DIC + ++V L ++++ ++R+ + Sbjct: 1 MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK + + Sbjct: 61 GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|262392494|ref|YP_003284348.1| 30S ribosomal protein S13p [Vibrio sp. Ex25] gi|269964715|ref|ZP_06178953.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B] gi|262336088|gb|ACY49883.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. Ex25] gi|269830614|gb|EEZ84835.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B] Length = 118 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|218895270|ref|YP_002443681.1| ribosomal protein S13 [Bacillus cereus G9842] gi|228898888|ref|ZP_04063170.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222] gi|228905932|ref|ZP_04069829.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200] gi|228937438|ref|ZP_04100084.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228963235|ref|ZP_04124404.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto str. T04001] gi|228970324|ref|ZP_04130983.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976894|ref|ZP_04137306.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407] gi|226712692|sp|B7IT44|RS13_BACC2 RecName: Full=30S ribosomal protein S13 gi|218543072|gb|ACK95466.1| ribosomal protein S13 [Bacillus cereus G9842] gi|228782864|gb|EEM31030.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407] gi|228789433|gb|EEM37353.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228796493|gb|EEM43932.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto str. T04001] gi|228822271|gb|EEM68253.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228853747|gb|EEM98507.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200] gi|228860788|gb|EEN05166.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222] gi|326937930|gb|AEA13826.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar chinensis CT-43] Length = 121 Score = 166 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|319778702|ref|YP_004129615.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9] gi|317108726|gb|ADU91472.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9] Length = 121 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG S+ IC + ++V L + E+ +IR+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIYGIGRSRSRLICEAAGVETTKKVKDLTDDELEKIREKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 GE-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPRRAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|255038113|ref|YP_003088734.1| 30S ribosomal protein S13 [Dyadobacter fermentans DSM 18053] gi|254950869|gb|ACT95569.1| ribosomal protein S13 [Dyadobacter fermentans DSM 18053] Length = 125 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KR +L YI GIG S++ I K + ++V + E IR I Sbjct: 1 MARIAGVDIPDRKRGEISLTYIFGIGRSSAKKILEKAGVDLNKKVIDWTDDESGAIRGVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y+VEG L+ V ++IKRLMD+ CYRGLRHR+GLP+RGQRT N+RTRK K + Sbjct: 61 AGEYKVEGALKSEVQLSIKRLMDIACYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTIANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|57234754|ref|YP_181243.1| 30S ribosomal protein S13 [Dehalococcoides ethenogenes 195] gi|91207699|sp|Q3Z956|RS13_DEHE1 RecName: Full=30S ribosomal protein S13 gi|57225202|gb|AAW40259.1| ribosomal protein S13 [Dehalococcoides ethenogenes 195] Length = 129 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 59/120 (49%), Positives = 84/120 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP K+V +L YI GIG S+ + + + RV++L + E+ ++R+ I Sbjct: 1 MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKAIRVNKLTDEEINRLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEGDLR+ +A+NIKRL+D+GCYRG RH+ LPVRGQRT TNARTR+ K R Sbjct: 61 DKEYRVEGDLRKEIALNIKRLIDIGCYRGNRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120 >gi|58699348|ref|ZP_00374121.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila ananassae] gi|58534134|gb|EAL58360.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila ananassae] Length = 122 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL YI+GIG ++ IC+ + +RV +L + ++ +I I Sbjct: 1 MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK + +A Sbjct: 61 RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|331699148|ref|YP_004335387.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190] gi|326953837|gb|AEA27534.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190] Length = 126 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 80/117 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI GIG S +I N I + R L + ++ +R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILNATGISKDLRSKDLSDEDLTALRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +++VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNAR RK K Sbjct: 61 EANFRVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARGRKGPKKTV 117 >gi|300718683|ref|YP_003743486.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661] gi|299064519|emb|CAX61639.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661] Length = 118 Score = 166 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ +R A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICATTGIAENVKISELSEEQIDILRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|224585213|ref|YP_002639012.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469741|gb|ACN47571.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 118 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKIRELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|254483422|ref|ZP_05096651.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148] gi|214036296|gb|EEB76974.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148] Length = 118 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G +++++C + R+ +L E+E+ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGRTTAKELCAATGVTESTRIGELSETEMDALRGKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 AE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|225709440|gb|ACO10566.1| 30S ribosomal protein S13 [Caligus rogercresseyi] Length = 125 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR V L YI+GIG SS+ I + I +V + + ++ IRQ + Sbjct: 1 MARIAGVDLPKNKRGVIGLTYIYGIGLTSSKKILVEAEIDESVKVREWSDKDIKSIRQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y VEG LR + +NIKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK K + Sbjct: 61 ADSYTVEGQLRTEIQLNIKRLMDIACYRGLRHRKGLPLRGQRTQTNARTRKGKRKTVANK 120 Query: 121 KR 122 ++ Sbjct: 121 EK 122 >gi|210631177|ref|ZP_03296788.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279] gi|210160144|gb|EEA91115.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279] Length = 124 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P KR L YI+GIG ++ +C L I R+ L E ++ IR I Sbjct: 1 MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLRR + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK + A Sbjct: 61 DKNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGA 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|262383851|ref|ZP_06076987.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B] gi|301312009|ref|ZP_07217931.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3] gi|262294749|gb|EEY82681.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B] gi|300830111|gb|EFK60759.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3] Length = 126 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG +++ + +K + + +V + + ++R+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREV 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPLRGQSTKNNARTRKG 113 >gi|322378757|ref|ZP_08053186.1| 30S ribosomal protein S13 [Helicobacter suis HS1] gi|321148787|gb|EFX43258.1| 30S ribosomal protein S13 [Helicobacter suis HS1] Length = 122 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 68/120 (56%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI K+ I ++RVH L E ++ I + I Sbjct: 3 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 63 QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 122 >gi|50086193|ref|YP_047703.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1] gi|81392282|sp|Q6F7T4|RS13_ACIAD RecName: Full=30S ribosomal protein S13 gi|49532169|emb|CAG69881.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1] Length = 118 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G +++ I + I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKSILAAVGIGPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|157804013|ref|YP_001492562.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel] gi|157785276|gb|ABV73777.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel] Length = 145 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 85/121 (70%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIA VN+P KR+V +L YI+G+G + +IC+K I +++V +L + E+I +R IE Sbjct: 22 ARIASVNVPDNKRLVVSLTYIYGLGPTMAAEICSKAKISKDKKVKELTDQELISLRNIIE 81 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK +K Sbjct: 82 SEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAVAIAGKK 141 Query: 122 R 122 + Sbjct: 142 K 142 >gi|315145360|gb|EFT89376.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2141] Length = 121 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG +IPR KRVV +L YI+GIG +++ + + + + RV L + IR I Sbjct: 1 MARIAGGDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T NARTRK K + Sbjct: 61 DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRKGPTKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|149179435|ref|ZP_01857989.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797] gi|148841746|gb|EDL56155.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797] Length = 128 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 60/121 (49%), Positives = 78/121 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K V +L Y++GIG ++ DIC+KL I P+ + L + E+ +I + Sbjct: 1 MPRILGVDIPNEKPVYVSLTYLYGIGKVTALDICHKLNINPQLKAKDLTDDELSRIVNML 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEG LRR +I RL D+ YRG+RHRRGLPVRGQ T TNARTRK K + Sbjct: 61 DTDYSVEGQLRRATTQDIARLRDIQSYRGIRHRRGLPVRGQNTQTNARTRKGGKKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|150025384|ref|YP_001296210.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86] gi|158706230|sp|A6GZ76|RS13_FLAPJ RecName: Full=30S ribosomal protein S13 gi|149771925|emb|CAL43399.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86] Length = 124 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + ++ K + +++V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGVGRSRAIEVLEKAQVSQDKKVQDWNDDEIGGIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 S-FYKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116495923|ref|YP_807657.1| 30S ribosomal protein S13 [Lactobacillus casei ATCC 334] gi|191639405|ref|YP_001988571.1| 30S ribosomal protein S13 [Lactobacillus casei BL23] gi|227533983|ref|ZP_03964032.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630328|ref|ZP_04673359.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067480|ref|YP_003789503.1| 30S ribosomal protein L13 [Lactobacillus casei str. Zhang] gi|122262677|sp|Q035A7|RS13_LACC3 RecName: Full=30S ribosomal protein S13 gi|226712751|sp|B3WAJ4|RS13_LACCB RecName: Full=30S ribosomal protein S13 gi|116106073|gb|ABJ71215.1| SSU ribosomal protein S13P [Lactobacillus casei ATCC 334] gi|190713707|emb|CAQ67713.1| 30S ribosomal protein S13 [Lactobacillus casei BL23] gi|227188360|gb|EEI68427.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527940|gb|EEQ66941.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439887|gb|ADK19653.1| Ribosomal protein S13 [Lactobacillus casei str. Zhang] gi|327383493|gb|AEA54969.1| hypothetical protein LC2W_2639 [Lactobacillus casei LC2W] gi|327386686|gb|AEA58160.1| hypothetical protein LCBD_2666 [Lactobacillus casei BD-II] Length = 121 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKNAGVPENVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DS-VKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKASMAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|161506896|ref|YP_001576850.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571] gi|172048386|sp|A8YXM8|RS13_LACH4 RecName: Full=30S ribosomal protein S13 gi|160347885|gb|ABX26559.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571] Length = 116 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGNATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|124003685|ref|ZP_01688533.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134] gi|123990740|gb|EAY30207.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134] Length = 125 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP KR +L YI+GIG +++ I + I ++V + E +IR I Sbjct: 1 MARLAGVDIPDKKRGEVSLTYIYGIGLSTARTILERAGIDRNKKVIDWTDEESNEIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y+VEG L+ V ++IKRLMD+GCYRG+RHR+GLP+RGQ+T N+RTRK K + Sbjct: 61 SSEYKVEGALKSEVQLSIKRLMDIGCYRGIRHRKGLPLRGQKTKNNSRTRKGKRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|294674747|ref|YP_003575363.1| 30S ribosomal protein S13 [Prevotella ruminicola 23] gi|294473837|gb|ADE83226.1| ribosomal protein S13 [Prevotella ruminicola 23] Length = 126 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 80/113 (70%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V++ + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|298372564|ref|ZP_06982554.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058] gi|298275468|gb|EFI17019.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058] Length = 126 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+AKR L YI+GIG +++ I ++ I +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQAKRGEVGLTYIYGIGRSTARKILSEAGIDYNIKVQDWSDEQAGKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 I Y+VEG+LR V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK K Sbjct: 61 IGAKYRVEGELRSEVQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGKKKTVAN 120 Query: 120 RK 121 +K Sbjct: 121 KK 122 >gi|330432102|gb|AEC17161.1| 30S ribosomal protein S13 [Gallibacterium anatis UMN179] Length = 118 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG +Q IC+ + I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRAQHICDAVGIAGSVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|269104034|ref|ZP_06156731.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp. damselae CIP 102761] gi|268163932|gb|EEZ42428.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp. damselae CIP 102761] Length = 118 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|170728987|ref|YP_001763013.1| 30S ribosomal protein S13 [Shewanella woodyi ATCC 51908] gi|226712786|sp|B1KMW1|RS13_SHEWM RecName: Full=30S ribosomal protein S13 gi|169814334|gb|ACA88918.1| ribosomal protein S13 [Shewanella woodyi ATCC 51908] Length = 118 Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC ++ + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTGIFGIGRTRARAICAATSVAEDAKIKELSEAQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|53803438|ref|YP_114766.1| 30S ribosomal protein S13 [Methylococcus capsulatus str. Bath] gi|81681371|sp|Q605D4|RS13_METCA RecName: Full=30S ribosomal protein S13 gi|53757199|gb|AAU91490.1| ribosomal protein S13 [Methylococcus capsulatus str. Bath] Length = 118 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V+ +L I+GIG + IC I +++V +L + +V ++R + Sbjct: 1 MARIAGVNIPDHKHVLISLTAIYGIGRTRAGLICKNAGIETDKKVRELSDEQVERLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR VAMNIKRLMDLG YRG+RHRRGLPVRGQRT TNARTRK + Sbjct: 61 AK-FVVEGDLRREVAMNIKRLMDLGSYRGMRHRRGLPVRGQRTRTNARTRKGPRRPI 116 >gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933] gi|15833417|ref|NP_312190.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. Sakai] gi|16131177|ref|NP_417757.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|24114576|ref|NP_709086.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 301] gi|26249884|ref|NP_755924.1| 30S ribosomal protein S13 [Escherichia coli CFT073] gi|30065401|ref|NP_839572.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 2457T] gi|74313817|ref|YP_312236.1| 30S ribosomal protein S13 [Shigella sonnei Ss046] gi|82545661|ref|YP_409608.1| 30S ribosomal protein S13 [Shigella boydii Sb227] gi|82778594|ref|YP_404943.1| 30S ribosomal protein S13 [Shigella dysenteriae Sd197] gi|89110712|ref|AP_004492.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. W3110] gi|91212726|ref|YP_542712.1| 30S ribosomal protein S13 [Escherichia coli UTI89] gi|110643537|ref|YP_671267.1| 30S ribosomal protein S13 [Escherichia coli 536] gi|110807146|ref|YP_690666.1| 30S ribosomal protein S13 [Shigella flexneri 5 str. 8401] gi|117625580|ref|YP_858903.1| 30S ribosomal protein S13 [Escherichia coli APEC O1] gi|157156782|ref|YP_001464766.1| 30S ribosomal protein S13 [Escherichia coli E24377A] gi|157162772|ref|YP_001460090.1| 30S ribosomal protein S13 [Escherichia coli HS] gi|168752252|ref|ZP_02777274.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113] gi|168758526|ref|ZP_02783533.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401] gi|168764981|ref|ZP_02789988.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501] gi|168769160|ref|ZP_02794167.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486] gi|168777843|ref|ZP_02802850.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196] gi|168783866|ref|ZP_02808873.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076] gi|168786188|ref|ZP_02811195.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869] gi|168802727|ref|ZP_02827734.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508] gi|170018466|ref|YP_001723420.1| 30S ribosomal protein S13 [Escherichia coli ATCC 8739] gi|170082818|ref|YP_001732138.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. DH10B] gi|170683249|ref|YP_001745560.1| 30S ribosomal protein S13 [Escherichia coli SMS-3-5] gi|187730609|ref|YP_001881983.1| 30S ribosomal protein S13 [Shigella boydii CDC 3083-94] gi|188496196|ref|ZP_03003466.1| ribosomal protein S13p [Escherichia coli 53638] gi|191169310|ref|ZP_03031059.1| ribosomal protein S13p [Escherichia coli B7A] gi|191174461|ref|ZP_03035962.1| ribosomal protein S13p [Escherichia coli F11] gi|193066496|ref|ZP_03047540.1| ribosomal protein S13p [Escherichia coli E22] gi|193071552|ref|ZP_03052461.1| ribosomal protein S13p [Escherichia coli E110019] gi|194430277|ref|ZP_03062772.1| ribosomal protein S13p [Escherichia coli B171] gi|194435062|ref|ZP_03067300.1| ribosomal protein S13p [Shigella dysenteriae 1012] gi|194440008|ref|ZP_03072066.1| ribosomal protein S13p [Escherichia coli 101-1] gi|195939846|ref|ZP_03085228.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC4024] gi|208809664|ref|ZP_03252001.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206] gi|208814033|ref|ZP_03255362.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045] gi|208818664|ref|ZP_03258984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042] gi|209398653|ref|YP_002272754.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115] gi|209920764|ref|YP_002294848.1| 30S ribosomal protein S13 [Escherichia coli SE11] gi|215488598|ref|YP_002331029.1| 30S ribosomal protein S13 [Escherichia coli O127:H6 str. E2348/69] gi|217325692|ref|ZP_03441776.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588] gi|218550574|ref|YP_002384365.1| 30S ribosomal protein S13 [Escherichia fergusonii ATCC 35469] gi|218555856|ref|YP_002388769.1| 30S ribosomal protein S13 [Escherichia coli IAI1] gi|218560360|ref|YP_002393273.1| 30S ribosomal protein S13 [Escherichia coli S88] gi|218691585|ref|YP_002399797.1| 30S ribosomal protein S13 [Escherichia coli ED1a] gi|218696991|ref|YP_002404658.1| 30S ribosomal protein S13 [Escherichia coli 55989] gi|218702061|ref|YP_002409690.1| 30S ribosomal protein S13 [Escherichia coli IAI39] gi|218706906|ref|YP_002414425.1| 30S ribosomal protein S13 [Escherichia coli UMN026] gi|237703028|ref|ZP_04533509.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA] gi|238902389|ref|YP_002928185.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952] gi|253771878|ref|YP_003034709.1| 30S ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038459|ref|ZP_04872515.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43] gi|254163226|ref|YP_003046334.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606] gi|254795235|ref|YP_003080072.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. TW14359] gi|256020657|ref|ZP_05434522.1| 30S ribosomal protein S13 [Shigella sp. D9] gi|256025974|ref|ZP_05439839.1| 30S ribosomal protein S13 [Escherichia sp. 4_1_40B] gi|260846096|ref|YP_003223874.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str. 12009] gi|260857419|ref|YP_003231310.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str. 11368] gi|260870041|ref|YP_003236443.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str. 11128] gi|261224603|ref|ZP_05938884.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. FRIK2000] gi|261254503|ref|ZP_05947036.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. FRIK966] gi|291284656|ref|YP_003501474.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615] gi|293406895|ref|ZP_06650819.1| rps13 [Escherichia coli FVEC1412] gi|293412717|ref|ZP_06655385.1| 30S ribosomal protein S13 [Escherichia coli B354] gi|297516786|ref|ZP_06935172.1| 30S ribosomal protein S13 [Escherichia coli OP50] gi|298382636|ref|ZP_06992231.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302] gi|306816359|ref|ZP_07450497.1| 30S ribosomal protein S13 [Escherichia coli NC101] gi|307139981|ref|ZP_07499337.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|307315123|ref|ZP_07594706.1| 30S ribosomal protein S13 [Escherichia coli W] gi|309785620|ref|ZP_07680251.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617] gi|312968377|ref|ZP_07782587.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75] gi|312972441|ref|ZP_07786615.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70] gi|331643994|ref|ZP_08345123.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|331649095|ref|ZP_08350181.1| 30S ribosomal protein S13 [Escherichia coli M605] gi|331654891|ref|ZP_08355890.1| 30S ribosomal protein S13 [Escherichia coli M718] gi|331659588|ref|ZP_08360526.1| 30S ribosomal protein S13 [Escherichia coli TA206] gi|331664911|ref|ZP_08365812.1| 30S ribosomal protein S13 [Escherichia coli TA143] gi|331670127|ref|ZP_08370966.1| 30S ribosomal protein S13 [Escherichia coli TA271] gi|331679367|ref|ZP_08380037.1| 30S ribosomal protein S13 [Escherichia coli H591] gi|331684940|ref|ZP_08385526.1| 30S ribosomal protein S13 [Escherichia coli H299] gi|67472364|sp|P0A7S9|RS13_ECOLI RecName: Full=30S ribosomal protein S13 gi|67472365|sp|P0A7T0|RS13_ECOL6 RecName: Full=30S ribosomal protein S13 gi|67472366|sp|P0A7T1|RS13_ECO57 RecName: Full=30S ribosomal protein S13 gi|67472367|sp|P0A7T2|RS13_SHIFL RecName: Full=30S ribosomal protein S13 gi|91207724|sp|Q31VX8|RS13_SHIBS RecName: Full=30S ribosomal protein S13 gi|91207725|sp|Q32B53|RS13_SHIDS RecName: Full=30S ribosomal protein S13 gi|91207726|sp|Q3YWW1|RS13_SHISS RecName: Full=30S ribosomal protein S13 gi|122422201|sp|Q1R633|RS13_ECOUT RecName: Full=30S ribosomal protein S13 gi|122957162|sp|Q0T004|RS13_SHIF8 RecName: Full=30S ribosomal protein S13 gi|123343548|sp|Q0TCG3|RS13_ECOL5 RecName: Full=30S ribosomal protein S13 gi|158706229|sp|A1AGI9|RS13_ECOK1 RecName: Full=30S ribosomal protein S13 gi|116666560|pdb|1VS5|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|116666612|pdb|1VS7|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|256032356|pdb|3E1A|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Pre-Accommodation State gi|256032413|pdb|3E1C|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli Ribosome In Post-Accommodation State gi|257097334|pdb|3I1M|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097386|pdb|3I1O|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097438|pdb|3I1Q|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097492|pdb|3I1S|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097546|pdb|3I1Z|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|257097601|pdb|3I21|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An Intermediate State Of Ratcheting gi|290560319|pdb|3KC4|M Chain M, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3kcr gi|305677712|pdb|3IYX|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures Fitted Into The Cryo-Em Map Of E.Coli 70s Ribosome (Emd-1056) gi|305677717|pdb|3IYY|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures Fitted Into The Cryo-Em Map Of Efg.Gdpnp-Bound E.Coli 70s Ribosome(Emd-1363) gi|308198699|pdb|3OR9|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|308198720|pdb|3ORA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Cem-101. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|326634291|pdb|3IZV|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding. This Entry Contains The Small Subunit Of A Ribosome Programmed With A Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|326634316|pdb|3IZW|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate Discrimination During Decoding.This Entry Contains The Small Subunit Of A Ribosome Programmed With A Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu gi|12517927|gb|AAG58419.1|AE005556_12 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. EDL933] gi|26110312|gb|AAN82498.1|AE016767_258 30S ribosomal protein S13 [Escherichia coli CFT073] gi|581217|emb|CAA26392.1| unnamed protein product [Escherichia coli] gi|606230|gb|AAA58093.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|1789693|gb|AAC76323.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. MG1655] gi|13363636|dbj|BAB37586.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. Sakai] gi|24053772|gb|AAN44793.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 301] gi|30043663|gb|AAP19383.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 2457T] gi|73857294|gb|AAZ90001.1| 30S ribosomal subunit protein S13 [Shigella sonnei Ss046] gi|81242742|gb|ABB63452.1| 30S ribosomal subunit protein S13 [Shigella dysenteriae Sd197] gi|81247072|gb|ABB67780.1| 30S ribosomal subunit protein S13 [Shigella boydii Sb227] gi|85676743|dbj|BAE77993.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K12 substr. W3110] gi|91074300|gb|ABE09181.1| 30S ribosomal subunit protein S13 [Escherichia coli UTI89] gi|110345129|gb|ABG71366.1| 30S ribosomal protein S13 [Escherichia coli 536] gi|110616694|gb|ABF05361.1| 30S ribosomal subunit protein S13 [Shigella flexneri 5 str. 8401] gi|115514704|gb|ABJ02779.1| 30S ribosomal subunit protein S13 [Escherichia coli APEC O1] gi|157068452|gb|ABV07707.1| ribosomal protein S13p [Escherichia coli HS] gi|157078812|gb|ABV18520.1| ribosomal protein S13p [Escherichia coli E24377A] gi|169753394|gb|ACA76093.1| ribosomal protein S13 [Escherichia coli ATCC 8739] gi|169890653|gb|ACB04360.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12 substr. DH10B] gi|170520967|gb|ACB19145.1| ribosomal protein S13p [Escherichia coli SMS-3-5] gi|187427601|gb|ACD06875.1| ribosomal protein S13p [Shigella boydii CDC 3083-94] gi|187767000|gb|EDU30844.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196] gi|188013862|gb|EDU51984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113] gi|188491395|gb|EDU66498.1| ribosomal protein S13p [Escherichia coli 53638] gi|188998874|gb|EDU67860.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076] gi|189354683|gb|EDU73102.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401] gi|189361860|gb|EDU80279.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486] gi|189365118|gb|EDU83534.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501] gi|189373930|gb|EDU92346.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869] gi|189375354|gb|EDU93770.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508] gi|190900665|gb|EDV60465.1| ribosomal protein S13p [Escherichia coli B7A] gi|190905269|gb|EDV64907.1| ribosomal protein S13p [Escherichia coli F11] gi|192925877|gb|EDV80527.1| ribosomal protein S13p [Escherichia coli E22] gi|192955140|gb|EDV85634.1| ribosomal protein S13p [Escherichia coli E110019] gi|194411666|gb|EDX27993.1| ribosomal protein S13p [Escherichia coli B171] gi|194416669|gb|EDX32800.1| ribosomal protein S13p [Shigella dysenteriae 1012] gi|194421060|gb|EDX37089.1| ribosomal protein S13p [Escherichia coli 101-1] gi|208729465|gb|EDZ79066.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206] gi|208735310|gb|EDZ83997.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045] gi|208738787|gb|EDZ86469.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042] gi|209160053|gb|ACI37486.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115] gi|209757258|gb|ACI76941.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757260|gb|ACI76942.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757262|gb|ACI76943.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757264|gb|ACI76944.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209757266|gb|ACI76945.1| 30S ribosomal subunit protein S13 [Escherichia coli] gi|209914023|dbj|BAG79097.1| 30S ribosomal protein S13 [Escherichia coli SE11] gi|215266670|emb|CAS11109.1| 30S ribosomal subunit protein S13 [Escherichia coli O127:H6 str. E2348/69] gi|217321913|gb|EEC30337.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588] gi|218353723|emb|CAV00002.1| 30S ribosomal subunit protein S13 [Escherichia coli 55989] gi|218358115|emb|CAQ90762.1| 30S ribosomal subunit protein S13 [Escherichia fergusonii ATCC 35469] gi|218362624|emb|CAR00250.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI1] gi|218367129|emb|CAR04903.1| 30S ribosomal subunit protein S13 [Escherichia coli S88] gi|218372047|emb|CAR19907.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI39] gi|218429149|emb|CAR10101.2| 30S ribosomal subunit protein S13 [Escherichia coli ED1a] gi|218434003|emb|CAR14920.1| 30S ribosomal subunit protein S13 [Escherichia coli UMN026] gi|222035007|emb|CAP77750.1| 30S ribosomal protein S13 [Escherichia coli LF82] gi|226838965|gb|EEH70988.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43] gi|226902292|gb|EEH88551.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA] gi|238859787|gb|ACR61785.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952] gi|242378825|emb|CAQ33617.1| 30S ribosomal subunit protein S13, subunit of 30S ribosomal subunit and ribosome [Escherichia coli BL21(DE3)] gi|253322922|gb|ACT27524.1| ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975127|gb|ACT40798.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606] gi|253979283|gb|ACT44953.1| 30S ribosomal protein S13 [Escherichia coli BL21(DE3)] gi|254594635|gb|ACT73996.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str. TW14359] gi|257756068|dbj|BAI27570.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str. 11368] gi|257761243|dbj|BAI32740.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str. 12009] gi|257766397|dbj|BAI37892.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str. 11128] gi|260447683|gb|ACX38105.1| short-chain dehydrogenase/reductase SDR [Escherichia coli DH1] gi|281180333|dbj|BAI56663.1| 30S ribosomal protein S13 [Escherichia coli SE15] gi|281602663|gb|ADA75647.1| 30S ribosomal protein S13 [Shigella flexneri 2002017] gi|284923304|emb|CBG36398.1| 30S ribosomal subunit protein S13 [Escherichia coli 042] gi|290764529|gb|ADD58490.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615] gi|291425706|gb|EFE98740.1| rps13 [Escherichia coli FVEC1412] gi|291468364|gb|EFF10857.1| 30S ribosomal protein S13 [Escherichia coli B354] gi|294492834|gb|ADE91590.1| ribosomal protein S13p [Escherichia coli IHE3034] gi|298276472|gb|EFI17990.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302] gi|305850755|gb|EFM51212.1| 30S ribosomal protein S13 [Escherichia coli NC101] gi|306905472|gb|EFN36007.1| 30S ribosomal protein S13 [Escherichia coli W] gi|307555386|gb|ADN48161.1| 30S ribosomal subunit protein S13 [Escherichia coli ABU 83972] gi|307628333|gb|ADN72637.1| 30S ribosomal protein S13 [Escherichia coli UM146] gi|308926740|gb|EFP72216.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617] gi|309703710|emb|CBJ03051.1| 30S ribosomal subunit protein S13 [Escherichia coli ETEC H10407] gi|310334818|gb|EFQ01023.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70] gi|312287202|gb|EFR15112.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75] gi|312947849|gb|ADR28676.1| 30S ribosomal protein S13 [Escherichia coli O83:H1 str. NRG 857C] gi|313647392|gb|EFS11844.1| ribosomal S13/S18 family protein [Shigella flexneri 2a str. 2457T] gi|315062590|gb|ADT76917.1| 30S ribosomal subunit protein S13 [Escherichia coli W] gi|315137873|dbj|BAJ45032.1| 30S ribosomal protein S13 [Escherichia coli DH1] gi|315617100|gb|EFU97710.1| ribosomal S13/S18 family protein [Escherichia coli 3431] gi|320173942|gb|EFW49118.1| 30S ribosomal protein S13 [Shigella dysenteriae CDC 74-1112] gi|320182704|gb|EFW57590.1| 30S ribosomal protein S13 [Shigella boydii ATCC 9905] gi|320187019|gb|EFW61731.1| 30S ribosomal protein S13 [Shigella flexneri CDC 796-83] gi|320191668|gb|EFW66318.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC1212] gi|320195390|gb|EFW70017.1| 30S ribosomal protein S13 [Escherichia coli WV_060327] gi|320199485|gb|EFW74075.1| 30S ribosomal protein S13 [Escherichia coli EC4100B] gi|320639603|gb|EFX09197.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. G5101] gi|320645101|gb|EFX14117.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. 493-89] gi|320650412|gb|EFX18878.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. H 2687] gi|320655937|gb|EFX23857.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661389|gb|EFX28804.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. USDA 5905] gi|320666411|gb|EFX33394.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. LSU-61] gi|323154136|gb|EFZ40339.1| ribosomal S13/S18 family protein [Escherichia coli EPECa14] gi|323162977|gb|EFZ48812.1| ribosomal protein S13/S18 family protein [Escherichia coli E128010] gi|323164862|gb|EFZ50653.1| ribosomal S13/S18 family protein [Shigella sonnei 53G] gi|323173934|gb|EFZ59562.1| ribosomal protein S13/S18 family protein [Escherichia coli LT-68] gi|323179166|gb|EFZ64740.1| ribosomal protein S13/S18 family protein [Escherichia coli 1180] gi|323182776|gb|EFZ68177.1| ribosomal protein S13/S18 family protein [Escherichia coli 1357] gi|323189097|gb|EFZ74381.1| ribosomal protein S13/S18 family protein [Escherichia coli RN587/1] gi|323376823|gb|ADX49091.1| 30S ribosomal protein S13 [Escherichia coli KO11] gi|323934503|gb|EGB30911.1| 30S ribosomal protein S13 [Escherichia coli E1520] gi|323939280|gb|EGB35492.1| 30S ribosomal protein S13 [Escherichia coli E482] gi|323944281|gb|EGB40357.1| 30S ribosomal protein S13 [Escherichia coli H120] gi|323950212|gb|EGB46094.1| 30S ribosomal protein S13 [Escherichia coli H252] gi|323954579|gb|EGB50362.1| 30S ribosomal protein S13 [Escherichia coli H263] gi|323959551|gb|EGB55204.1| 30S ribosomal protein S13 [Escherichia coli H489] gi|323966260|gb|EGB61695.1| 30S ribosomal protein S13 [Escherichia coli M863] gi|323970102|gb|EGB65376.1| 30S ribosomal protein S13 [Escherichia coli TA007] gi|323974749|gb|EGB69862.1| 30S ribosomal protein S13 [Escherichia coli TW10509] gi|324111977|gb|EGC05956.1| 30S ribosomal protein S13 [Escherichia fergusonii B253] gi|324116312|gb|EGC10232.1| 30S ribosomal protein S13 [Escherichia coli E1167] gi|325498867|gb|EGC96726.1| 30S ribosomal protein S13 [Escherichia fergusonii ECD227] gi|326342546|gb|EGD66320.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1044] gi|326344533|gb|EGD68282.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1125] gi|327250946|gb|EGE62639.1| ribosomal protein S13/S18 family protein [Escherichia coli STEC_7v] gi|330909342|gb|EGH37856.1| SSU ribosomal protein S13p (S18e) [Escherichia coli AA86] gi|331036288|gb|EGI08514.1| 30S ribosomal protein S13 [Escherichia coli H736] gi|331041593|gb|EGI13737.1| 30S ribosomal protein S13 [Escherichia coli M605] gi|331046906|gb|EGI18984.1| 30S ribosomal protein S13 [Escherichia coli M718] gi|331052803|gb|EGI24836.1| 30S ribosomal protein S13 [Escherichia coli TA206] gi|331057421|gb|EGI29407.1| 30S ribosomal protein S13 [Escherichia coli TA143] gi|331062189|gb|EGI34109.1| 30S ribosomal protein S13 [Escherichia coli TA271] gi|331072539|gb|EGI43864.1| 30S ribosomal protein S13 [Escherichia coli H591] gi|331077311|gb|EGI48523.1| 30S ribosomal protein S13 [Escherichia coli H299] gi|332085447|gb|EGI90613.1| ribosomal protein S13/S18 family protein [Shigella boydii 5216-82] gi|332086267|gb|EGI91423.1| ribosomal protein S13/S18 family protein [Shigella dysenteriae 155-74] gi|332090433|gb|EGI95531.1| ribosomal protein S13/S18 family protein [Shigella boydii 3594-74] gi|332104205|gb|EGJ07551.1| ribosomal protein S13p [Shigella sp. D9] Length = 118 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|303256472|ref|ZP_07342486.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47] gi|331000666|ref|ZP_08324319.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT 11859] gi|302859963|gb|EFL83040.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47] gi|329570878|gb|EGG52589.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT 11859] Length = 121 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG +++I + + ++V L ++E+ +IR AI Sbjct: 1 MARIAGINIPPNQHAEIGLTAIYGIGRPRAREILEAVGVEKTKKVKDLTDAELERIRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR + ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK K GVA Sbjct: 61 SK-LTVEGDLRREIQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPKKAGVAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|260909774|ref|ZP_05916468.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str. F0295] gi|288929316|ref|ZP_06423161.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str. F0108] gi|260636199|gb|EEX54195.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str. F0295] gi|288329418|gb|EFC68004.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str. F0108] Length = 126 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|15639203|ref|NP_218650.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025444|ref|YP_001933216.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14] gi|6094154|sp|O83240|RS13_TREPA RecName: Full=30S ribosomal protein S13 gi|226712800|sp|B2S2F8|RS13_TREPS RecName: Full=30S ribosomal protein S13 gi|3322479|gb|AAC65199.1| ribosomal protein S13 (rpsM) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018019|gb|ACD70637.1| ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14] gi|291059615|gb|ADD72350.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str. Chicago] Length = 121 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GI S++ IC K I ++ L + E+ +R I Sbjct: 1 MARIAGVDLP-NKHVSVALTYIYGISRSSARTICEKARISSACLINDLSQDELAVVRAII 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK K + Sbjct: 60 DREYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRKGKRKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|262370556|ref|ZP_06063881.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046] gi|262314356|gb|EEY95398.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046] Length = 118 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I P ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILAAVGIAPTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|319952173|ref|YP_004163440.1| ssu ribosomal protein s13p [Cellulophaga algicola DSM 14237] gi|319420833|gb|ADV47942.1| SSU ribosomal protein S13P [Cellulophaga algicola DSM 14237] Length = 124 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I + + +V + E+ +IR+++ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGNSRAKEILANAQVSEDTKVSDWNDDEISRIRESV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300174008|ref|YP_003773174.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811] gi|299888387|emb|CBL92355.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811] Length = 123 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNNTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ D Q+EGDLRR V+++IK L ++ YRG+RHR+GLPV GQ T NARTRK K Sbjct: 61 DKLDLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVHGQNTKNNARTRKGPAKSIAG 120 Query: 120 RKR 122 RK+ Sbjct: 121 RKK 123 >gi|254458644|ref|ZP_05072068.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1] gi|207084410|gb|EDZ61698.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1] Length = 120 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 66/119 (55%), Positives = 84/119 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KRV L YI+GIG +S+ I + I +RV +L E++V I I Sbjct: 1 MARISGVDLPKKKRVEYGLTYIYGIGLHASRLILDATGIDYNKRVFELNEADVAAITAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK K A Sbjct: 61 RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119 >gi|229015536|ref|ZP_04172533.1| 30S ribosomal protein S13 [Bacillus cereus AH1273] gi|229021746|ref|ZP_04178327.1| 30S ribosomal protein S13 [Bacillus cereus AH1272] gi|229027983|ref|ZP_04184136.1| 30S ribosomal protein S13 [Bacillus cereus AH1271] gi|229159308|ref|ZP_04287332.1| 30S ribosomal protein S13 [Bacillus cereus R309803] gi|228624200|gb|EEK81002.1| 30S ribosomal protein S13 [Bacillus cereus R309803] gi|228733371|gb|EEL84200.1| 30S ribosomal protein S13 [Bacillus cereus AH1271] gi|228739555|gb|EEL89970.1| 30S ribosomal protein S13 [Bacillus cereus AH1272] gi|228745759|gb|EEL95764.1| 30S ribosomal protein S13 [Bacillus cereus AH1273] Length = 121 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|15642569|ref|NP_232202.1| 30S ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674839|ref|YP_001218068.1| 30S ribosomal protein S13 [Vibrio cholerae O395] gi|153217778|ref|ZP_01951421.1| ribosomal protein S13 [Vibrio cholerae 1587] gi|153827709|ref|ZP_01980376.1| ribosomal protein S13 [Vibrio cholerae MZO-2] gi|153831169|ref|ZP_01983836.1| ribosomal protein S13 [Vibrio cholerae 623-39] gi|227082691|ref|YP_002811242.1| ribosomal protein S13 [Vibrio cholerae M66-2] gi|229507374|ref|ZP_04396879.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286] gi|229509702|ref|ZP_04399183.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33] gi|229513497|ref|ZP_04402961.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21] gi|229516827|ref|ZP_04406273.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9] gi|229521640|ref|ZP_04411058.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80] gi|229527496|ref|ZP_04416888.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)] gi|229606880|ref|YP_002877528.1| 30S ribosomal protein S13 [Vibrio cholerae MJ-1236] gi|254292239|ref|ZP_04963002.1| ribosomal protein S13 [Vibrio cholerae AM-19226] gi|254851114|ref|ZP_05240464.1| ribosomal protein S13 [Vibrio cholerae MO10] gi|255744457|ref|ZP_05418409.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101] gi|258622734|ref|ZP_05717752.1| 30S ribosomal protein S13 [Vibrio mimicus VM573] gi|258625762|ref|ZP_05720641.1| 30S ribosomal protein S13 [Vibrio mimicus VM603] gi|261211129|ref|ZP_05925418.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341] gi|262166595|ref|ZP_06034332.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223] gi|262170489|ref|ZP_06038167.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451] gi|262401861|ref|ZP_06078426.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586] gi|297581416|ref|ZP_06943339.1| ribosomal protein S13 [Vibrio cholerae RC385] gi|298500602|ref|ZP_07010406.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757] gi|32363415|sp|Q9KP05|RS13_VIBCH RecName: Full=30S ribosomal protein S13 gi|9657160|gb|AAF95715.1| ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124113315|gb|EAY32135.1| ribosomal protein S13 [Vibrio cholerae 1587] gi|146316722|gb|ABQ21261.1| ribosomal protein S13 [Vibrio cholerae O395] gi|148873356|gb|EDL71491.1| ribosomal protein S13 [Vibrio cholerae 623-39] gi|149737818|gb|EDM52723.1| ribosomal protein S13 [Vibrio cholerae MZO-2] gi|150421841|gb|EDN13825.1| ribosomal protein S13 [Vibrio cholerae AM-19226] gi|227010579|gb|ACP06791.1| ribosomal protein S13 [Vibrio cholerae M66-2] gi|227014463|gb|ACP10673.1| ribosomal protein S13 [Vibrio cholerae O395] gi|229335128|gb|EEO00613.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)] gi|229341234|gb|EEO06238.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80] gi|229345890|gb|EEO10862.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9] gi|229349374|gb|EEO14330.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21] gi|229353176|gb|EEO18115.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33] gi|229354879|gb|EEO19800.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286] gi|229369535|gb|ACQ59958.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae MJ-1236] gi|254846819|gb|EET25233.1| ribosomal protein S13 [Vibrio cholerae MO10] gi|255737982|gb|EET93375.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101] gi|258582000|gb|EEW06870.1| 30S ribosomal protein S13 [Vibrio mimicus VM603] gi|258584922|gb|EEW09653.1| 30S ribosomal protein S13 [Vibrio mimicus VM573] gi|260839630|gb|EEX66241.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341] gi|261891565|gb|EEY37551.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451] gi|262026311|gb|EEY44979.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223] gi|262351833|gb|EEZ00964.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586] gi|297534254|gb|EFH73092.1| ribosomal protein S13 [Vibrio cholerae RC385] gi|297540771|gb|EFH76828.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757] gi|327485056|gb|AEA79463.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae LMA3894-4] Length = 118 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I L I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|229009644|ref|ZP_04166870.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048] gi|229131143|ref|ZP_04260055.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196] gi|229165123|ref|ZP_04292918.1| 30S ribosomal protein S13 [Bacillus cereus AH621] gi|228618386|gb|EEK75416.1| 30S ribosomal protein S13 [Bacillus cereus AH621] gi|228652356|gb|EEL08281.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196] gi|228751666|gb|EEM01466.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048] Length = 121 Score = 166 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLSEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|261854971|ref|YP_003262254.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2] gi|261835440|gb|ACX95207.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 72/115 (62%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K VV AL I+GIG +Q IC + P R+V L ESEV +R + Sbjct: 1 MARIAGINIPVQKHVVIALTSIYGIGTTRAQAICQASGVEPSRKVRDLSESEVEALRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK + Sbjct: 61 AK-FIVEGDLRRDVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRR 114 >gi|317401571|gb|EFV82200.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans C54] Length = 121 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P +++V L ++E+ ++R+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLSDAELERVREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|260102379|ref|ZP_05752616.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075] gi|260083823|gb|EEW67943.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075] gi|323465846|gb|ADX69533.1| 30S ribosomal protein S13 [Lactobacillus helveticus H10] gi|328463388|gb|EGF35061.1| 30S ribosomal protein S13 [Lactobacillus helveticus MTCC 5463] Length = 116 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|227879266|ref|ZP_03997136.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01] gi|256849159|ref|ZP_05554592.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US] gi|227861160|gb|EEJ68809.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01] gi|256713935|gb|EEU28923.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US] Length = 116 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICAYAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|238763712|ref|ZP_04624671.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638] gi|238698014|gb|EEP90772.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|238855092|ref|ZP_04645420.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3] gi|256852060|ref|ZP_05557447.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN] gi|260661371|ref|ZP_05862284.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN] gi|260664877|ref|ZP_05865728.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US] gi|297205065|ref|ZP_06922461.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16] gi|313472573|ref|ZP_07813062.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153] gi|238832336|gb|EEQ24645.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3] gi|239530013|gb|EEQ69014.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153] gi|256615472|gb|EEU20662.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN] gi|260547826|gb|EEX23803.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN] gi|260561360|gb|EEX27333.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US] gi|297149643|gb|EFH29940.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16] Length = 116 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 83/116 (71%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPREKRIVVALTYIYGIGEPTAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y+VEGDLRR ++MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREISMNIKRLVDIGSYRGVRHRRGLPVRGQNTKNNARTRKGSKRS 115 >gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206577841|ref|YP_002236301.1| ribosomal protein S13 [Klebsiella pneumoniae 342] gi|238896795|ref|YP_002921540.1| 30S ribosomal protein S13 [Klebsiella pneumoniae NTUH-K2044] gi|288933288|ref|YP_003437347.1| 30S ribosomal protein S13 [Klebsiella variicola At-22] gi|166231913|sp|A6TEV1|RS13_KLEP7 RecName: Full=30S ribosomal protein S13 gi|226712749|sp|B5XNB4|RS13_KLEP3 RecName: Full=30S ribosomal protein S13 gi|150957055|gb|ABR79085.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|206566899|gb|ACI08675.1| ribosomal protein S13 [Klebsiella pneumoniae 342] gi|238549122|dbj|BAH65473.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|288888017|gb|ADC56335.1| 30S ribosomal protein S13 [Klebsiella variicola At-22] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG S+ IC + I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|157372755|ref|YP_001480744.1| 30S ribosomal protein S13 [Serratia proteamaculans 568] gi|166991603|sp|A8GKH6|RS13_SERP5 RecName: Full=30S ribosomal protein S13 gi|157324519|gb|ABV43616.1| ribosomal protein S13 [Serratia proteamaculans 568] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAEHVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|94500970|ref|ZP_01307495.1| ribosomal protein S13 [Oceanobacter sp. RED65] gi|94426910|gb|EAT11893.1| ribosomal protein S13 [Oceanobacter sp. RED65] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++G+G +++ IC + I ++ L + ++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYVYGVGLPTAKQICKAVGIEESTKISDLSDEKLDELRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVSMNIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|239948297|ref|ZP_04700050.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes scapularis] gi|239922573|gb|EER22597.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes scapularis] Length = 125 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|85060234|ref|YP_455936.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans'] gi|123518717|sp|Q2NQP4|RS13_SODGM RecName: Full=30S ribosomal protein S13 gi|84780754|dbj|BAE75531.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans'] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ +R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGKTRSQHICAATGIAEHVKISELSEEQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 TK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|288801122|ref|ZP_06406578.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str. F0039] gi|288332056|gb|EFC70538.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str. F0039] Length = 126 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRKG 113 >gi|212697277|ref|ZP_03305405.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM 7454] gi|325848813|ref|ZP_08170323.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675726|gb|EEB35333.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM 7454] gi|325480457|gb|EGC83519.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 113 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 60/112 (53%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG S+Q+I K I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + DY +EGDLRR V+MNI+ L ++ CYRGLRH++GLPVRGQ T NARTRK Sbjct: 61 D-DYTIEGDLRREVSMNIRNLREINCYRGLRHKKGLPVRGQNTKNNARTRKG 111 >gi|322380606|ref|ZP_08054758.1| 30S ribosomal protein S13 [Helicobacter suis HS5] gi|321146928|gb|EFX41676.1| 30S ribosomal protein S13 [Helicobacter suis HS5] Length = 120 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 68/120 (56%), Positives = 88/120 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI K+ I ++RVH L E ++ I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|254468398|ref|ZP_05081804.1| ribosomal protein S13p/S18e [beta proteobacterium KB13] gi|207087208|gb|EDZ64491.1| ribosomal protein S13p/S18e [beta proteobacterium KB13] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K AL I+GIG ++Q+IC + + ++ L ++ V ++R I Sbjct: 1 MARIAGVNVPDNKHADIALTAIYGIGRTTAQNICKSVGVDAATKIKDLDDAAVEKLRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + YQ+EGDLRR V MNIKRLMDL CYRG RHRRGLPVRGQRT TNARTRK + Sbjct: 61 AK-YQIEGDLRREVTMNIKRLMDLNCYRGQRHRRGLPVRGQRTKTNARTRKGPIRAI 116 >gi|312884681|ref|ZP_07744382.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122] gi|309367594|gb|EFP95145.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|283788066|ref|YP_003367931.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168] gi|282951520|emb|CBG91219.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGIGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|319942195|ref|ZP_08016511.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B] gi|319804248|gb|EFW01140.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B] Length = 121 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I+GIG S+ I + IP ++V L ++E+ +IR A+ Sbjct: 1 MARIAGINIPPQQHAEIGLTAIYGIGRSRSRLILEQCGIPCTKKVQDLTDAELERIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLP RGQRT TNARTRK K GV Sbjct: 61 SK-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPCRGQRTRTNARTRKGPRKVGVTL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411] gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411] Length = 119 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 75/121 (61%), Positives = 88/121 (72%), Gaps = 2/121 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV +PR K++ AL YI+GIG S +I K I P++R H+L E+ +IR I Sbjct: 1 MARIAGVELPRNKKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 DY+VEG+LR+ VAMNIK LMDLG YRGLRHRRGLPVRGQRT TNARTRK K V R Sbjct: 61 -ADYKVEGELRKEVAMNIKALMDLGNYRGLRHRRGLPVRGQRTRTNARTRKG-KKKTVGR 118 Query: 121 K 121 K Sbjct: 119 K 119 >gi|284992849|ref|YP_003411403.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160] gi|284066094|gb|ADB77032.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160] Length = 126 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 57/117 (48%), Positives = 84/117 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG +++ + P+ RV L + +++++R I Sbjct: 1 MARLAGVDLPRDKRMEIALTYIYGIGKTHAKETLAATGVSPDLRVRDLGDEDLLRLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K K Sbjct: 61 DEHFRVEGDLRREVAADIRRKVEIGCYQGLRHRRGLPVHGQRTRTNARSSKGPRKTI 117 >gi|163752894|ref|ZP_02160018.1| 30S ribosomal protein S13 [Kordia algicida OT-1] gi|161326626|gb|EDP97951.1| 30S ribosomal protein S13 [Kordia algicida OT-1] Length = 124 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G ++++ + + +V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKHKRGVIALTYIFGVGRSRAKEVLATAKVSEDTKVSDWTDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y +EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GT-YTIEGELRTEVQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|325287071|ref|YP_004262861.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489] gi|324322525|gb|ADY29990.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489] Length = 124 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G +++I K + + +V + E+ +IR A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGVGRSRAKEILAKAQVSEDTKVSDWNDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EG+LR + ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SE-FTIEGELRSEIQLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163783359|ref|ZP_02178352.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1] gi|159881467|gb|EDP74978.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1] Length = 105 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 60/105 (57%), Positives = 77/105 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P KR+ AL YI+GIG ++IC I +RV +L E+ +R+ I Sbjct: 1 MARIAGVDLPDNKRLEIALTYIYGIGKTRVREICESTGIDCRKRVGELSPEELNTLRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 ++ Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T T Sbjct: 61 DEHYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRT 105 >gi|157828838|ref|YP_001495080.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933565|ref|YP_001650354.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. Iowa] gi|166231921|sp|A8GT47|RS13_RICRS RecName: Full=30S ribosomal protein S13 gi|189044290|sp|B0BUN8|RS13_RICRO RecName: Full=30S ribosomal protein S13 gi|157801319|gb|ABV76572.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908652|gb|ABY72948.1| SSU ribosomal protein S13P [Rickettsia rickettsii str. Iowa] Length = 125 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KRVV +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|50122929|ref|YP_052096.1| 30S ribosomal protein S13 [Pectobacterium atrosepticum SCRI1043] gi|81643772|sp|Q6CZZ2|RS13_ERWCT RecName: Full=30S ribosomal protein S13 gi|49613455|emb|CAG76906.1| 30S ribosomal subunit protein S13 [Pectobacterium atrosepticum SCRI1043] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATEIAENVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|33152932|ref|NP_874285.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP] gi|71153725|sp|Q7VKF5|RS13_HAEDU RecName: Full=30S ribosomal protein S13 gi|33149157|gb|AAP96674.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP] Length = 118 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICVATGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 SK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|34558007|ref|NP_907822.1| 30S ribosomal protein S13 [Wolinella succinogenes DSM 1740] gi|81653421|sp|Q7M8F4|RS13_WOLSU RecName: Full=30S ribosomal protein S13 gi|34483725|emb|CAE10722.1| 30S RIBOSOMAL PROTEIN S13 [Wolinella succinogenes] Length = 122 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG K+S+DI + + I ++RV +L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKTSRDILSAVNISLDKRVQELSEDEVSLISKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K + Sbjct: 61 QESYAVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|257453245|ref|ZP_05618544.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_5R] gi|257467160|ref|ZP_05631471.1| 30S ribosomal protein S13 [Fusobacterium gonidiaformans ATCC 25563] gi|315918291|ref|ZP_07914531.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC 25563] gi|317059779|ref|ZP_07924264.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R] gi|313685455|gb|EFS22290.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R] gi|313692166|gb|EFS29001.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC 25563] Length = 118 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR+ I Sbjct: 1 MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|58336653|ref|YP_193238.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM] gi|227903211|ref|ZP_04021016.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796] gi|75358065|sp|Q5FM67|RS13_LACAC RecName: Full=30S ribosomal protein S13 gi|58253970|gb|AAV42207.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM] gi|227869016|gb|EEJ76437.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796] Length = 116 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+V AL YI+GIG +++ IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114 >gi|163786167|ref|ZP_02180615.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1] gi|159878027|gb|EDP72083.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1] Length = 124 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V +L YI+G+G +++I + +V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVISLTYIYGVGRSRAKEILATAKVDESTKVQDWSDDEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++EG+LR MNIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GT-FKIEGELRSETQMNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|150008961|ref|YP_001303704.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503] gi|255014791|ref|ZP_05286917.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_7] gi|256841038|ref|ZP_05546545.1| 30S ribosomal protein S13 [Parabacteroides sp. D13] gi|298375806|ref|ZP_06985762.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19] gi|158706340|sp|A6LEG8|RS13_PARD8 RecName: Full=30S ribosomal protein S13 gi|149937385|gb|ABR44082.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503] gi|256736881|gb|EEU50208.1| 30S ribosomal protein S13 [Parabacteroides sp. D13] gi|298266843|gb|EFI08500.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19] Length = 126 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG +++ + +K + + +V + + ++R+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREV 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRVGLPLRGQSTKNNARTRKG 113 >gi|332181994|gb|AEE17682.1| 30S ribosomal protein S13 [Treponema brennaborense DSM 12168] Length = 121 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GIG S+ +IC K I P+ ++ L + ++ +R I Sbjct: 1 MARIAGVDLP-NKHVNIALTYIYGIGRSSADEICKKTKINPDAMINDLSQDDLAALRTVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + +Y+VEG LR + +NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTR Sbjct: 60 DGEYKVEGRLRSEIGLNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTR 109 >gi|315453713|ref|YP_004073983.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179] gi|315132765|emb|CBY83393.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179] Length = 120 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 69/120 (57%), Positives = 90/120 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG KSS+DI +K+ I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILHKVGISLDKRVHELGEDEVSSITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++ VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QANHIVEGDLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|304384299|ref|ZP_07366710.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973] gi|304334615|gb|EFM00897.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973] Length = 126 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL Y++GIG SS I +K + + +V + + + +IR Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIRGI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEGDLR V MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ISAEFKVEGDLRTEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|251787993|ref|YP_003002714.1| 30S ribosomal protein S13 [Dickeya zeae Ech1591] gi|271502224|ref|YP_003335250.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586] gi|307132817|ref|YP_003884833.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937] gi|247536614|gb|ACT05235.1| ribosomal protein S13 [Dickeya zeae Ech1591] gi|270345779|gb|ACZ78544.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586] gi|306530346|gb|ADN00277.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937] Length = 118 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHTVIALTAIYGIGKTRSKSICAATGIAEDVKISELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREITLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|28377856|ref|NP_784748.1| 30S ribosomal protein S13 [Lactobacillus plantarum WCFS1] gi|254556041|ref|YP_003062458.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1] gi|300767844|ref|ZP_07077754.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180034|ref|YP_003924162.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ST-III] gi|32363297|sp|Q88XW2|RS13_LACPL RecName: Full=30S ribosomal protein S13 gi|28270689|emb|CAD63595.1| ribosomal protein S13 [Lactobacillus plantarum WCFS1] gi|254044968|gb|ACT61761.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1] gi|300494829|gb|EFK29987.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045525|gb|ADN98068.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 121 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G+++PR KR+V L YI+GIG S+Q I + + + RV L + +IR + Sbjct: 1 MARIEGIDLPRDKRIVIGLTYIYGIGNTSAQKILAEAGVSEDVRVRDLTPDQEDKIRAVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+ EGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T NARTRK R Sbjct: 61 D-GYKTEGDLRREVSLNIKLLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300728419|ref|ZP_07061781.1| ribosomal protein S13p/S18e [Prevotella bryantii B14] gi|299774338|gb|EFI70968.1| ribosomal protein S13p/S18e [Prevotella bryantii B14] Length = 126 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI GIG SS I ++ + + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDQAGVNRDLKVSEWTDEQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I ++VEGDLR ++MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAGFKVEGDLRSEISMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRKG 113 >gi|283780397|ref|YP_003371152.1| 30S ribosomal protein S13 [Pirellula staleyi DSM 6068] gi|283438850|gb|ADB17292.1| ribosomal protein S13 [Pirellula staleyi DSM 6068] Length = 127 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 60/121 (49%), Positives = 79/121 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K V +L Y++G+G ++++C K I E+R L E E+ ++ + Sbjct: 1 MPRLLGVDIPNDKPTVISLGYLYGVGDHVARELCQKAGIDTEKRARDLSEEELARLATLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY VEG LRR V NI RL D+ CYRG+RHR GLPVRGQRT TNARTRK K + Sbjct: 61 ERDYTVEGPLRRLVQQNINRLRDIKCYRGIRHRLGLPVRGQRTKTNARTRKGPKKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|229524555|ref|ZP_04413960.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis VL426] gi|229338136|gb|EEO03153.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis VL426] Length = 118 Score = 165 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I L I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGVGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|27364193|ref|NP_759721.1| 30S ribosomal protein S13 [Vibrio vulnificus CMCP6] gi|37678580|ref|NP_933189.1| 30S ribosomal protein S13 [Vibrio vulnificus YJ016] gi|320157579|ref|YP_004189958.1| 30S ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O] gi|32363317|sp|Q8DE61|RS13_VIBVU RecName: Full=30S ribosomal protein S13 gi|71153726|sp|Q7MPG7|RS13_VIBVY RecName: Full=30S ribosomal protein S13 gi|27360311|gb|AAO09248.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus CMCP6] gi|37197320|dbj|BAC93160.1| ribosomal protein S13 [Vibrio vulnificus YJ016] gi|319932891|gb|ADV87755.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O] Length = 118 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAEDVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|298207750|ref|YP_003715929.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559] gi|83850388|gb|EAP88256.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559] Length = 124 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q++ + +++V + E+ +IRQ + Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEVLKNANVSEDKKVSDWNDEEISRIRQQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EG+LR V+++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GQ-FTIEGELRTEVSLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|257456914|ref|ZP_05622095.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580] gi|257445623|gb|EEV20685.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580] Length = 125 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 68/116 (58%), Positives = 85/116 (73%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P K V AL YI+GI S++ IC K I P R ++ L + E+ IR I Sbjct: 1 MARISGVDLP-NKHVNIALTYIYGISHSSAKAICEKSKIDPMRMINDLNQDELAAIRAVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +QDY+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTRK + Sbjct: 60 DQDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTRKGKKRP 115 >gi|67458692|ref|YP_246316.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2] gi|75536846|sp|Q4UMQ7|RS13_RICFE RecName: Full=30S ribosomal protein S13 gi|67004225|gb|AAY61151.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2] Length = 125 Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297564063|ref|YP_003683036.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848512|gb|ADH70530.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 126 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 59/110 (53%), Positives = 79/110 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++PR KRV AL YI GIG + + + RV++L E +++++R+ I Sbjct: 1 MARIEGVDLPRDKRVEIALTYIFGIGRTRALETLKSTGVDGNTRVYELTEEDLVKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 +YQVEGDLRR V +I+R M++G Y+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 GSNYQVEGDLRREVQGDIRRKMEIGSYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|42520509|ref|NP_966424.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652512|sp|Q73HA7|RS13_WOLPM RecName: Full=30S ribosomal protein S13 gi|42410248|gb|AAS14358.1| ribosomal protein S13 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 122 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL YI+GIG ++ IC+ + +RV +L + ++ +I I Sbjct: 1 MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISGFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK + +A Sbjct: 61 RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|91786408|ref|YP_547360.1| 30S ribosomal protein S13 [Polaromonas sp. JS666] gi|123165434|sp|Q12G80|RS13_POLSJ RecName: Full=30S ribosomal protein S13 gi|91695633|gb|ABE42462.1| SSU ribosomal protein S13P [Polaromonas sp. JS666] Length = 121 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I +++ L + ++ +IR I Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEACDIAYSKKIKDLTDGDLEKIRDQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K A Sbjct: 61 -ALFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|89076302|ref|ZP_01162643.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34] gi|90581700|ref|ZP_01237488.1| 30S ribosomal protein S13 [Vibrio angustum S14] gi|89048006|gb|EAR53595.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34] gi|90437115|gb|EAS62318.1| 30S ribosomal protein S13 [Vibrio angustum S14] Length = 118 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|22127882|ref|NP_671305.1| 30S ribosomal protein S13 [Yersinia pestis KIM 10] gi|45440089|ref|NP_991628.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str. 91001] gi|51597966|ref|YP_072157.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953] gi|108809233|ref|YP_653149.1| 30S ribosomal protein S13 [Yersinia pestis Antiqua] gi|108813998|ref|YP_649765.1| 30S ribosomal protein S13 [Yersinia pestis Nepal516] gi|145597472|ref|YP_001161547.1| 30S ribosomal protein S13 [Yersinia pestis Pestoides F] gi|150260721|ref|ZP_01917449.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125] gi|153948869|ref|YP_001402841.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758] gi|162419404|ref|YP_001605194.1| 30S ribosomal protein S13 [Yersinia pestis Angola] gi|165927875|ref|ZP_02223707.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. F1991016] gi|165940335|ref|ZP_02228856.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. IP275] gi|166010483|ref|ZP_02231381.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. E1979001] gi|166213241|ref|ZP_02239276.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. B42003004] gi|167398509|ref|ZP_02304033.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418694|ref|ZP_02310447.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425710|ref|ZP_02317463.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022566|ref|YP_001719071.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis YPIII] gi|186897162|ref|YP_001874274.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+] gi|218927437|ref|YP_002345312.1| 30S ribosomal protein S13 [Yersinia pestis CO92] gi|229836287|ref|ZP_04456454.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A] gi|229840089|ref|ZP_04460248.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842171|ref|ZP_04462326.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. India 195] gi|229904529|ref|ZP_04519640.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516] gi|270488253|ref|ZP_06205327.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27] gi|294502306|ref|YP_003566368.1| 30S ribosomal protein S13 [Yersinia pestis Z176003] gi|32363373|sp|Q8ZJ90|RS13_YERPE RecName: Full=30S ribosomal protein S13 gi|81638250|sp|Q664U3|RS13_YERPS RecName: Full=30S ribosomal protein S13 gi|123072596|sp|Q1C2W8|RS13_YERPA RecName: Full=30S ribosomal protein S13 gi|123246110|sp|Q1CCW5|RS13_YERPN RecName: Full=30S ribosomal protein S13 gi|158706296|sp|A4TH12|RS13_YERPP RecName: Full=30S ribosomal protein S13 gi|166991605|sp|A7FNL3|RS13_YERP3 RecName: Full=30S ribosomal protein S13 gi|226712809|sp|B2K515|RS13_YERPB RecName: Full=30S ribosomal protein S13 gi|226712810|sp|A9R915|RS13_YERPG RecName: Full=30S ribosomal protein S13 gi|226712811|sp|B1JIY3|RS13_YERPY RecName: Full=30S ribosomal protein S13 gi|21961018|gb|AAM87556.1|AE014003_14 30S ribosomal subunit protein S13 [Yersinia pestis KIM 10] gi|45434944|gb|AAS60505.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str. 91001] gi|51591248|emb|CAH22914.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953] gi|108777646|gb|ABG20165.1| SSU ribosomal protein S13P [Yersinia pestis Nepal516] gi|108781146|gb|ABG15204.1| SSU ribosomal protein S13P [Yersinia pestis Antiqua] gi|115346048|emb|CAL18914.1| 30S ribosomal protein S13 [Yersinia pestis CO92] gi|145209168|gb|ABP38575.1| SSU ribosomal protein S13P [Yersinia pestis Pestoides F] gi|149290129|gb|EDM40206.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125] gi|152960364|gb|ABS47825.1| ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758] gi|162352219|gb|ABX86167.1| ribosomal protein S13 [Yersinia pestis Angola] gi|165911725|gb|EDR30381.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. IP275] gi|165920151|gb|EDR37452.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. F1991016] gi|165990573|gb|EDR42874.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. E1979001] gi|166205539|gb|EDR50019.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962688|gb|EDR58709.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051013|gb|EDR62421.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055400|gb|EDR65194.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749100|gb|ACA66618.1| ribosomal protein S13 [Yersinia pseudotuberculosis YPIII] gi|186700188|gb|ACC90817.1| ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+] gi|229678647|gb|EEO74752.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516] gi|229690481|gb|EEO82535.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. India 195] gi|229696455|gb|EEO86502.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706355|gb|EEO92362.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A] gi|262360386|gb|ACY57107.1| 30S ribosomal protein S13 [Yersinia pestis D106004] gi|262364337|gb|ACY60894.1| 30S ribosomal protein S13 [Yersinia pestis D182038] gi|270336757|gb|EFA47534.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27] gi|294352765|gb|ADE63106.1| 30S ribosomal protein S13 [Yersinia pestis Z176003] gi|320013364|gb|ADV96935.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 118 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAEHVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|320103639|ref|YP_004179230.1| 30S ribosomal protein S13P [Isosphaera pallida ATCC 43644] gi|319750921|gb|ADV62681.1| SSU ribosomal protein S13P [Isosphaera pallida ATCC 43644] Length = 127 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 56/121 (46%), Positives = 76/121 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K +L YI+GIG + ++C +L I P +R L E E+ +I + Sbjct: 1 MPRLLGVDIPNDKPTQYSLRYIYGIGPTLALEVCQRLNIDPSKRARDLTEEELARIAALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEG LRR + + I RL + CYRGLRHR+ LPVRGQRT TNARTRK + + Sbjct: 61 DNEYTVEGQLRRQIQLAIGRLQAISCYRGLRHRKKLPVRGQRTRTNARTRKGPRRTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|296111452|ref|YP_003621834.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154] gi|295832984|gb|ADG40865.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154] Length = 123 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ + Q+EGDLRR V+++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DKLNLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +++ Sbjct: 121 KRK 123 >gi|311277747|ref|YP_003939978.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1] gi|308746942|gb|ADO46694.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1] Length = 118 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|256544530|ref|ZP_05471903.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170] gi|256399855|gb|EEU13459.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170] Length = 113 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/112 (53%), Positives = 81/112 (72%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG S+Q+I K I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + DY +EGDLRR V+MNI+ L ++ CYRG+RH+RGLPVRGQ T NARTRK Sbjct: 61 D-DYTIEGDLRREVSMNIRNLREINCYRGIRHKRGLPVRGQNTKNNARTRKG 111 >gi|330430074|gb|AEC21408.1| 30S ribosomal protein S13 [Pusillimonas sp. T7-7] Length = 121 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC I ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICESAGIELSKKVKDLTDAELERIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|331702056|ref|YP_004399015.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929] gi|329129399|gb|AEB73952.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929] Length = 120 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI GIG ++Q + K + + RV L + +IR+ + Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIFGIGNTTAQKVLAKAGVSEDVRVRDLTPDQEDKIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T NARTRK K R Sbjct: 61 G-DLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKG-SKVAAGR 118 Query: 121 KR 122 ++ Sbjct: 119 RK 120 >gi|148652259|ref|YP_001279352.1| 30S ribosomal protein S13 [Psychrobacter sp. PRwf-1] gi|172048488|sp|A5WCL1|RS13_PSYWF RecName: Full=30S ribosomal protein S13 gi|148571343|gb|ABQ93402.1| SSU ribosomal protein S13P [Psychrobacter sp. PRwf-1] Length = 118 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG +++ I + + I P ++ QL ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTTAKKILDTVGIAPTTKISQLDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T NARTRK + Sbjct: 61 G-NYMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPIRSI 116 >gi|114330595|ref|YP_746817.1| 30S ribosomal protein S13 [Nitrosomonas eutropha C91] gi|122314411|sp|Q0AIH4|RS13_NITEC RecName: Full=30S ribosomal protein S13 gi|114307609|gb|ABI58852.1| SSU ribosomal protein S13P [Nitrosomonas eutropha C91] Length = 119 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V AL I+GIG +++ IC L IPP ++ +L + ++ ++R +I Sbjct: 1 MARIAGVNLPSNKHVNIALTAIYGIGNSTARKICTDLDIPPFIKLKELTDGKLEELRNSI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V+MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK K AR Sbjct: 61 AK-LLVEGDLRREVSMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRKGPRKAIRAR 119 >gi|21674974|ref|NP_663039.1| 30S ribosomal protein S13 [Chlorobium tepidum TLS] gi|32363337|sp|Q8KAJ5|RS13_CHLTE RecName: Full=30S ribosomal protein S13 gi|21648206|gb|AAM73381.1| ribosomal protein S13 [Chlorobium tepidum TLS] Length = 125 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/115 (52%), Positives = 80/115 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL Y++GIG S+++I K + P++++ +L + E IR+ I Sbjct: 2 RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y VEG+ R ++IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 62 EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKTV 116 >gi|12045028|ref|NP_072838.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37] gi|255660324|ref|ZP_05405733.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37] gi|1350932|sp|P47421|RS13_MYCGE RecName: Full=30S ribosomal protein S13 gi|3844771|gb|AAC71394.1| ribosomal protein S13 [Mycoplasma genitalium G37] gi|166079035|gb|ABY79653.1| ribosomal protein S13 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 124 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 83/121 (68%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI G++IP KR+ AL YI GIG S++ I K I P++RV L E E++ IR A Sbjct: 1 MARILGIDIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EGDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK K + Sbjct: 60 ASGYKIEGDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRKGPRKTVANK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|322831094|ref|YP_004211121.1| 30S ribosomal protein S13 [Rahnella sp. Y9602] gi|321166295|gb|ADW71994.1| 30S ribosomal protein S13 [Rahnella sp. Y9602] Length = 118 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDQKHTVIALTSIYGIGKTRSQSICAASGIAENVKISELSEEQIEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-FIVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|303237462|ref|ZP_07324027.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN] gi|302482282|gb|EFL45312.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN] Length = 126 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG SS I +K I + +V + + + +IR+ Sbjct: 1 MAIRIVGVDLPQEKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +++VEG+LR + MNIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 IGAEFKVEGELRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113 >gi|16272741|ref|NP_438959.1| 30S ribosomal protein S13 [Haemophilus influenzae Rd KW20] gi|1173196|sp|P44380|RS13_HAEIN RecName: Full=30S ribosomal protein S13 gi|1573810|gb|AAC22458.1| ribosomal protein S13 (rpS13) [Haemophilus influenzae Rd KW20] Length = 122 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ IC I + ++ +L E ++ ++R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK Sbjct: 61 GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110 >gi|120437152|ref|YP_862838.1| 30S ribosomal protein S13 [Gramella forsetii KT0803] gi|158706234|sp|A0M576|RS13_GRAFK RecName: Full=30S ribosomal protein S13 gi|117579302|emb|CAL67771.1| 30S ribosomal protein S13 [Gramella forsetii KT0803] Length = 124 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG +Q+I + + ++V + E+ +IR+A+ Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEILAQAKVDESKKVSDWDDDEIGKIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EG+LR V ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GQ-FTIEGELRTEVQISIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|124268604|ref|YP_001022608.1| 30S ribosomal protein S13 [Methylibium petroleiphilum PM1] gi|158706441|sp|A2SLD4|RS13_METPP RecName: Full=30S ribosomal protein S13 gi|124261379|gb|ABM96373.1| SSU ribosomal protein S13P [Methylibium petroleiphilum PM1] Length = 121 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K L I+GIG ++Q IC+ I ++++ L + ++ +IR+ + Sbjct: 1 MARIAGINIPPQKHAEIGLTAIYGIGRTTAQKICDSCGIARDKKIKDLTDGDLEKIREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EGDLRR +NIKRLMDLGCYRG RHRRGLP+RGQRT TNARTRK K A Sbjct: 61 GR-MTIEGDLRRETTINIKRLMDLGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKSAAAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|257463988|ref|ZP_05628373.1| 30S ribosomal protein S13 [Fusobacterium sp. D12] gi|317061510|ref|ZP_07925995.1| SSU ribosomal protein S13P [Fusobacterium sp. D12] gi|313687186|gb|EFS24021.1| SSU ribosomal protein S13P [Fusobacterium sp. D12] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IPR KRV AL YI+GIG +SQ + + + + RV L + E+ +IR+ I Sbjct: 1 MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTDDEINKIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|260770935|ref|ZP_05879864.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972] gi|260614172|gb|EEX39362.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972] gi|315178981|gb|ADT85895.1| 30S ribosomal protein S13 [Vibrio furnissii NCTC 11218] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEHVKISELTEDQINQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|330718949|ref|ZP_08313549.1| 30S ribosomal protein S13 [Leuconostoc fallax KCTC 3537] Length = 123 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KR+V L YI+GIG ++Q + + + + RV L + IR A+ Sbjct: 1 MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLTEAKVSEDVRVRDLTSDQEDAIRAAV 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +Q + Q+EGDLRR ++++IK L ++ YRG+RHR+GLPVRGQ T NARTRK K Sbjct: 61 DQLNLQLEGDLRRKISLDIKGLQEIAAYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|320538144|ref|ZP_08038039.1| 30S ribosomal protein S13 [Treponema phagedenis F0421] gi|320144961|gb|EFW36682.1| 30S ribosomal protein S13 [Treponema phagedenis F0421] Length = 121 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V AL YI+GI S++ IC K I P R ++ L + E+ IR + Sbjct: 1 MARIAGVDLP-NKHVNIALTYIYGISHSSAKTICEKAKIDPGRMMNDLDQDELAVIRSIL 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E+DY+VEG LR VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR Sbjct: 60 EKDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTR 109 >gi|326334522|ref|ZP_08200733.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693291|gb|EGD35219.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 124 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I K + + +V + ++ +IR+A+ Sbjct: 1 MARIAGIDLPKHKRGVIGLTYIFGIGKSRAKEILKKAQVDEDIKVSDWNDEQITRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK K + Sbjct: 61 SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|81429354|ref|YP_396355.1| 30S ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K] gi|91207704|sp|Q38UT5|RS13_LACSS RecName: Full=30S ribosomal protein S13 gi|78610997|emb|CAI56049.1| 30S Ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K] Length = 121 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI GIG ++ + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRDKQIVIALTYIFGIGNTTAVKVLADAGVPTDVRTRDLTPDQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DT-VKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKKVSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|78484661|ref|YP_390586.1| 30S ribosomal protein S13 [Thiomicrospira crunogena XCL-2] gi|91207630|sp|Q31IW1|RS13_THICR RecName: Full=30S ribosomal protein S13 gi|78362947|gb|ABB40912.1| SSU ribosomal protein S13P [Thiomicrospira crunogena XCL-2] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K +V L I+G+G ++Q IC + I P +V +L E ++ +R + Sbjct: 1 MARIAGVNIPVNKHIVIGLRSIYGVGQTTAQKICADVNIDPTTKVRELTEEQLEALRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +++EGDLRR V MNIKRLMD+GCYRG+RHRR LP+RGQRT NARTRK K Sbjct: 61 TK-FKIEGDLRRDVTMNIKRLMDMGCYRGIRHRRSLPLRGQRTKNNARTRKGPKKPI 116 >gi|262273357|ref|ZP_06051171.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886] gi|262222335|gb|EEY73646.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAESTKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|154494403|ref|ZP_02033723.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC 43184] gi|218262264|ref|ZP_03476787.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii DSM 18315] gi|154085847|gb|EDN84892.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC 43184] gi|218223487|gb|EEC96137.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii DSM 18315] Length = 126 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG +S+ I +K I + +V + + ++R+ Sbjct: 1 MAIRIVGVDLPQNKRGEIALTYIYGIGRSASKSILDKAGIDRDIKVKDWTDDQAAKVREV 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I +Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 61 IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRKG 113 >gi|254281884|ref|ZP_04956852.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B] gi|219678087|gb|EED34436.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++ +C + +V L E ++ Q+R + Sbjct: 1 MARIAGVNIPDHKHAVVSLTYIYGVGRTQAKKLCAVTGVDEATKVADLNEGQLDQLRSLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +EGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 SE-MTIEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|33594504|ref|NP_882148.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I] gi|33594775|ref|NP_882418.1| 30S ribosomal protein S13 [Bordetella parapertussis 12822] gi|33599047|ref|NP_886607.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50] gi|81424286|sp|Q7VTA8|RS13_BORPE RecName: Full=30S ribosomal protein S13 gi|81425890|sp|Q7W2D2|RS13_BORPA RecName: Full=30S ribosomal protein S13 gi|81432513|sp|Q7WRA0|RS13_BORBR RecName: Full=30S ribosomal protein S13 gi|33564580|emb|CAE43896.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I] gi|33564851|emb|CAE39795.1| 30S ribosomal protein S13 [Bordetella parapertussis] gi|33575093|emb|CAE30556.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50] Length = 121 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P ++V L ++E+ +IR+ I Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAAGVPVTKKVKDLTDAELERIREHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-VFAVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|209693945|ref|YP_002261873.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238] gi|208007896|emb|CAQ78026.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I + I + ++ +L + ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKISELNDEQIDILRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|330814178|ref|YP_004358417.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp. IMCC9063] gi|327487273|gb|AEA81678.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp. IMCC9063] Length = 127 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+N+P K+V AL YI+GIG ++ IC +L I +RV+ L E EV+++R+ I Sbjct: 1 MARISGINLPLNKQVYIALQYIYGIGDHYAEKICKELNIDRSKRVNNLTEDEVLKVRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRTH+NARTRK + Sbjct: 61 DKNYSVEGDLRRDISLNIKRLRDLGTYRGTRHRKKLPVRGQRTHSNARTRKGKAIAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|165977218|ref|YP_001652811.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|167855328|ref|ZP_02478096.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755] gi|190151136|ref|YP_001969661.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|219871574|ref|YP_002475949.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165] gi|223042025|ref|ZP_03612206.1| 30S ribosomal protein S13 [Actinobacillus minor 202] gi|240948153|ref|ZP_04752556.1| 30S ribosomal protein S13 [Actinobacillus minor NM305] gi|254362775|ref|ZP_04978857.1| ribosomal protein S13 [Mannheimia haemolytica PHL213] gi|261492714|ref|ZP_05989262.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495671|ref|ZP_05992117.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. OVINE] gi|303250034|ref|ZP_07336236.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253208|ref|ZP_07339357.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246711|ref|ZP_07528781.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248852|ref|ZP_07530865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251080|ref|ZP_07533004.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253466|ref|ZP_07535337.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255696|ref|ZP_07537500.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257880|ref|ZP_07539636.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260148|ref|ZP_07541858.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262276|ref|ZP_07543925.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264485|ref|ZP_07546070.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|153094404|gb|EDN75253.1| ribosomal protein S13 [Mannheimia haemolytica PHL213] gi|165877319|gb|ABY70367.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|167853586|gb|EDS24832.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755] gi|189916267|gb|ACE62519.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|219691778|gb|ACL33001.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165] gi|223017187|gb|EEF15618.1| 30S ribosomal protein S13 [Actinobacillus minor 202] gi|240297506|gb|EER48013.1| 30S ribosomal protein S13 [Actinobacillus minor NM305] gi|261308778|gb|EEY10035.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311567|gb|EEY12722.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|302647890|gb|EFL78097.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302651097|gb|EFL81251.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852411|gb|EFM84646.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854779|gb|EFM86969.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856910|gb|EFM89042.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859145|gb|EFM91187.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861373|gb|EFM93363.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863610|gb|EFM95537.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865794|gb|EFM97672.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868039|gb|EFM99866.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870182|gb|EFN01941.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 118 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|59710866|ref|YP_203642.1| 30S ribosomal protein S13 [Vibrio fischeri ES114] gi|197333946|ref|YP_002155018.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11] gi|75354725|sp|Q5E892|RS13_VIBF1 RecName: Full=30S ribosomal protein S13 gi|59478967|gb|AAW84754.1| 30S ribosomal subunit protein S13 [Vibrio fischeri ES114] gi|197315436|gb|ACH64883.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11] Length = 118 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L + ++ +R + Sbjct: 1 MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELNDEQIDILRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|257454068|ref|ZP_05619342.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60] gi|257448546|gb|EEV23515.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60] Length = 118 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + +L YI GIG ++ I + I P ++ +L ++++ +R + Sbjct: 1 MARIAGVNIPDNKHAIISLTYIFGIGRTTAAKILEAVNIAPTTKISELNDTQLDAVRTQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y EGDLRR ++MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK K Sbjct: 61 AE-YATEGDLRREISMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRKGPRKAI 116 >gi|293602601|ref|ZP_06685044.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553] gi|311109579|ref|YP_003982432.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8] gi|292818973|gb|EFF78011.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553] gi|310764268|gb|ADP19717.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8] Length = 121 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P +++V L ++E+ ++R+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLNDAELERVREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-LFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|238898905|ref|YP_002924587.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259494682|sp|C4K796|RS13_HAMD5 RecName: Full=30S ribosomal protein S13 gi|229466665|gb|ACQ68439.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 118 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ DIC K + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDKKHAVIALTSIYGIGRTTALDICAKTGVSAAVKISELSEKQIEELREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVTLNIKRLMDIGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|58584578|ref|YP_198151.1| 30S ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497932|sp|Q5GSW5|RS13_WOLTR RecName: Full=30S ribosomal protein S13 gi|58418894|gb|AAW70909.1| Ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 122 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K + L YI+GIG ++ IC+ I +RV +L + ++ +I I Sbjct: 1 MTRIAGVNVPVKKCIPFGLTYIYGIGISTANIICHACGIDKSKRVSELRDKDIEKINSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q+Y +EGDLR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK + +A Sbjct: 61 RQNYSIEGDLRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGKSRLPIAG 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|30248440|ref|NP_840510.1| 30S ribosomal protein S13 [Nitrosomonas europaea ATCC 19718] gi|32363227|sp|P59755|RS13_NITEU RecName: Full=30S ribosomal protein S13 gi|30138326|emb|CAD84334.1| Ribosomal protein S13 [Nitrosomonas europaea ATCC 19718] Length = 119 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 67/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V AL I+GIG +++ IC+ L IPP ++ L + ++ ++R+++ Sbjct: 1 MARIAGVNLPSNKHVNIALTAIYGIGNTTARKICSDLQIPPFIKLKDLEDIKLDELRESV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR ++MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK K A+ Sbjct: 61 SK-LIVEGDLRREISMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRKGPRKAIGAK 119 >gi|295398312|ref|ZP_06808354.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563] gi|294973451|gb|EFG49236.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563] Length = 121 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V AL YI+GIG +SQ I + I + RV L E+ ++R A+ Sbjct: 1 MARIAGVDIPREKRIVIALTYIYGIGKTTSQKILAQAEISEDTRVRDLTNDELDRLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR A++IKRL ++G YRG+RHRRGLPVRGQ T NARTRK + Sbjct: 61 DT-IKVEGDLRRERALDIKRLQEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIQGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|332170582|gb|AEE19837.1| 30S ribosomal protein S13 [Krokinobacter diaphorus 4H-3-7-5] Length = 124 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG +++I + +++V + E+ +IR A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRAEEILAAANVSEDKKVSDWDDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163859248|ref|YP_001633546.1| 30S ribosomal protein S13 [Bordetella petrii DSM 12804] gi|226712701|sp|A9IHS0|RS13_BORPD RecName: Full=30S ribosomal protein S13 gi|163262976|emb|CAP45279.1| 30S ribosomal protein S13 [Bordetella petrii] Length = 121 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I GIG ++ IC +P ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPLSKKVKDLTDAELERIREHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|228472158|ref|ZP_04056924.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624] gi|228276361|gb|EEK15085.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624] Length = 124 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I + + +V + ++ +IR+A+ Sbjct: 1 MARIAGIDLPKHKRGVIGLTYIFGIGRSRAKEILKTAQVDEDIKVSDWNDEQITRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK K + Sbjct: 61 SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|88812735|ref|ZP_01127981.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231] gi|88789973|gb|EAR21094.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231] Length = 118 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K AL I+GIG + IC I PE ++ +L E+E+ +R + Sbjct: 1 MARIAGVNIPANKHTAIALTSIYGIGRSCAAAICRATGIAPECKIQELTEAELEHLRGEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR VAM+IKRLMDLGCYRG+RHRRGL VRGQRT TNARTRK + Sbjct: 61 GK-YVIEGDLRRQVAMDIKRLMDLGCYRGIRHRRGLSVRGQRTRTNARTRKGPRRAI 116 >gi|77414587|ref|ZP_00790730.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515] gi|77159385|gb|EAO70553.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515] Length = 110 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110 >gi|329893621|ref|ZP_08269755.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088] gi|328923548|gb|EGG30860.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088] Length = 118 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+G+G ++++C I + ++ L E+++ ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGVGKTKAKELCAATNIAEDTKIGDLSEAQMDELRGKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK K Sbjct: 61 GE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRKGPRKPI 116 >gi|260772118|ref|ZP_05881035.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14] gi|260612985|gb|EEX38187.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14] Length = 118 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAESVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|34581391|ref|ZP_00142871.1| 30S ribosomal protein S13 [Rickettsia sibirica 246] gi|229586987|ref|YP_002845488.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5] gi|238650950|ref|YP_002916806.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic] gi|259494689|sp|C3PP85|RS13_RICAE RecName: Full=30S ribosomal protein S13 gi|259494690|sp|C4K2F7|RS13_RICPU RecName: Full=30S ribosomal protein S13 gi|28262776|gb|EAA26280.1| 30S ribosomal protein S13 [Rickettsia sibirica 246] gi|228022037|gb|ACP53745.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5] gi|238625048|gb|ACR47754.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic] Length = 125 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|296120767|ref|YP_003628545.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] gi|296013107|gb|ADG66346.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776] Length = 128 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 60/121 (49%), Positives = 80/121 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K +L Y++G+G + +IC KL I P+R+ +L + E+ +I + Sbjct: 1 MPRIQGVDIPNDKPTYISLQYLYGVGDFRAFEICFKLEIDPQRKARELSDDELARISAML 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEG LRR++ NI RL D+ YRGLRHRRGLP RGQRT TNARTRK K + Sbjct: 61 DKDYLVEGSLRRSIQQNISRLRDIQSYRGLRHRRGLPCRGQRTRTNARTRKGIKKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|157964784|ref|YP_001499608.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5] gi|166991602|sp|A8F2C5|RS13_RICM5 RecName: Full=30S ribosomal protein S13 gi|157844560|gb|ABV85061.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5] Length = 125 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP +KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDSKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89093593|ref|ZP_01166541.1| ribosomal protein S13 [Oceanospirillum sp. MED92] gi|89082283|gb|EAR61507.1| ribosomal protein S13 [Oceanospirillum sp. MED92] Length = 118 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI+GIG ++ DI I P ++ L + ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIYGIGRTTASDILEACGIAPSTKIADLSDEQLDIVRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGC+RG+RHRR LPVRGQR+ TNARTRK K Sbjct: 61 AK-FTVEGDLRREISMSIKRLMDLGCFRGIRHRRNLPVRGQRSKTNARTRKGPRKPI 116 >gi|291280124|ref|YP_003496959.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1] gi|290754826|dbj|BAI81203.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1] Length = 122 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K+V L YI GIG +++ I + I +R+ +L E E+ IR+ I Sbjct: 1 MARIAGVDVPNNKKVEIGLTYIFGIGRSTAKKIVEETGIDSNKRIGELSEQEISSIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119 + + +VEG+LR+ + +NIKRLM++ CYRG RH+ +P RGQ+T +NARTR+ GK G+ Sbjct: 61 DSNLKVEGELRKEIGLNIKRLMEINCYRGYRHKNNMPCRGQKTRSNARTRRGLAGKRGIK 120 Query: 120 RK 121 RK Sbjct: 121 RK 122 >gi|330447015|ref|ZP_08310665.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491206|dbj|GAA05162.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 118 Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ I + I + ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAEDVKISELTEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|308387977|pdb|3OFO|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320035|pdb|3OFA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|309320139|pdb|3OFX|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The First 70s Ribosome. gi|315113624|pdb|3OAQ|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The First 70s Ribosome Length = 114 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 114 >gi|89902967|ref|YP_525438.1| 30S ribosomal protein S13 [Rhodoferax ferrireducens T118] gi|122478014|sp|Q21QP6|RS13_RHOFD RecName: Full=30S ribosomal protein S13 gi|89347704|gb|ABD71907.1| SSU ribosomal protein S13P [Rhodoferax ferrireducens T118] Length = 121 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I G+G ++ IC+ I ++V L + E+ +IR + Sbjct: 1 MARIAGINIPPQQHSEIGLTAIFGVGRNRARKICDACGIAYSKKVKDLTDLELEKIRDQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q + +EGDLRR MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK K + Sbjct: 61 AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAQSL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978] gi|169632372|ref|YP_001706108.1| 30S ribosomal protein S13 [Acinetobacter baumannii SDF] gi|169794616|ref|YP_001712409.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE] gi|184159576|ref|YP_001847915.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU] gi|213158813|ref|YP_002320811.1| ribosomal protein S13 [Acinetobacter baumannii AB0057] gi|215482205|ref|YP_002324387.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii AB307-0294] gi|239503212|ref|ZP_04662522.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB900] gi|260557049|ref|ZP_05829266.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606] gi|262373499|ref|ZP_06066777.1| 30S ribosomal protein S13 [Acinetobacter junii SH205] gi|294839725|ref|ZP_06784408.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013113] gi|294842675|ref|ZP_06787358.1| 30S ribosomal protein S13 [Acinetobacter sp. 6014059] gi|294860403|ref|ZP_06798172.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013150] gi|301345032|ref|ZP_07225773.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB056] gi|301512037|ref|ZP_07237274.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB058] gi|301595206|ref|ZP_07240214.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB059] gi|158706208|sp|A3M962|RS13_ACIBT RecName: Full=30S ribosomal protein S13 gi|226712678|sp|B7GW24|RS13_ACIB3 RecName: Full=30S ribosomal protein S13 gi|226712679|sp|B7IA17|RS13_ACIB5 RecName: Full=30S ribosomal protein S13 gi|226712680|sp|B2HZ86|RS13_ACIBC RecName: Full=30S ribosomal protein S13 gi|226712681|sp|B0VQU0|RS13_ACIBS RecName: Full=30S ribosomal protein S13 gi|226712682|sp|B0V6U4|RS13_ACIBY RecName: Full=30S ribosomal protein S13 gi|126388958|gb|ABO13456.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978] gi|169147543|emb|CAM85404.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE] gi|169151164|emb|CAO99836.1| 30S ribosomal protein S13 [Acinetobacter baumannii] gi|183211170|gb|ACC58568.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU] gi|213057973|gb|ACJ42875.1| ribosomal protein S13 [Acinetobacter baumannii AB0057] gi|213988532|gb|ACJ58831.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii AB307-0294] gi|260409655|gb|EEX02956.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606] gi|262311252|gb|EEY92338.1| 30S ribosomal protein S13 [Acinetobacter junii SH205] gi|322509486|gb|ADX04940.1| 30S ribosomal protein S13 [Acinetobacter baumannii 1656-2] gi|323519507|gb|ADX93888.1| 30S ribosomal protein S13 [Acinetobacter baumannii TCDC-AB0715] gi|325123582|gb|ADY83105.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus PHEA-2] Length = 118 Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|326793580|ref|YP_004311400.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1] gi|326544344|gb|ADZ89564.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRSICAATGVAETAKIGSLSDEVLDQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK K Sbjct: 61 -ANYTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|116667422|pdb|2GY9|M Chain M, Structure Of The 30s Subunit Of A Pre-Translocational E. Coli Ribosome Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1056 gi|116667474|pdb|2GYB|M Chain M, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli Ribosome Complex Obtained By Fitting Atomic Models For Rna And Protein Components Into Cryo-Em Map Emd-1143 Length = 115 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 115 >gi|88704354|ref|ZP_01102068.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71] gi|88701405|gb|EAQ98510.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++ IC + RV L E ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICEASGVEESARVGDLSEDQLDVLRNKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116 >gi|86132567|ref|ZP_01051160.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134] gi|85816809|gb|EAQ37994.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134] Length = 124 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG +Q+I + +++V + E+ +IR A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRAQEILATANVSEDKKVSDWDDDEIGRIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR V++NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 [Bordetella avium 197N] gi|123515218|sp|Q2L248|RS13_BORA1 RecName: Full=30S ribosomal protein S13 gi|115421157|emb|CAJ47641.1| 30S ribosomal protein S13 [Bordetella avium 197N] Length = 121 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP + L I G+G ++ IC +P ++V L ++E+ +IR+ + Sbjct: 1 MARIAGINIPPQQHAEIGLTAIFGVGRTRARKICEAAGVPVTKKVKDLTDAELERIREHL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK + + Sbjct: 61 G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|24371851|ref|NP_715893.1| 30S ribosomal protein S13 [Shewanella oneidensis MR-1] gi|113968566|ref|YP_732359.1| 30S ribosomal protein S13 [Shewanella sp. MR-4] gi|114045729|ref|YP_736279.1| 30S ribosomal protein S13 [Shewanella sp. MR-7] gi|117918679|ref|YP_867871.1| 30S ribosomal protein S13 [Shewanella sp. ANA-3] gi|32363324|sp|Q8EK48|RS13_SHEON RecName: Full=30S ribosomal protein S13 gi|123030062|sp|Q0HNR5|RS13_SHESM RecName: Full=30S ribosomal protein S13 gi|123131836|sp|Q0I083|RS13_SHESR RecName: Full=30S ribosomal protein S13 gi|158706277|sp|A0KRP6|RS13_SHESA RecName: Full=30S ribosomal protein S13 gi|24345668|gb|AAN53338.1|AE015474_1 ribosomal protein S13 [Shewanella oneidensis MR-1] gi|113883250|gb|ABI37302.1| SSU ribosomal protein S13P [Shewanella sp. MR-4] gi|113887171|gb|ABI41222.1| SSU ribosomal protein S13P [Shewanella sp. MR-7] gi|117611011|gb|ABK46465.1| SSU ribosomal protein S13P [Shewanella sp. ANA-3] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|312130525|ref|YP_003997865.1| ssu ribosomal protein s13p [Leadbetterella byssophila DSM 17132] gi|311907071|gb|ADQ17512.1| SSU ribosomal protein S13P [Leadbetterella byssophila DSM 17132] Length = 124 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 81/120 (67%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+GV+IP KR +L YI+GIG +++ I ++ + +++ + + E IR I Sbjct: 2 RISGVDIPDKKRGEISLTYIYGIGRSTAKHILSQANVSVDKKAGEWSDDEANAIRAIISN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +++VEG LR V ++IKRLMD+GCYRGLRHR+GLP+RGQ+T N+RTRK K +K+ Sbjct: 62 EFKVEGALRSEVQLSIKRLMDIGCYRGLRHRKGLPLRGQKTKNNSRTRKGKRKTIANKKK 121 >gi|254516932|ref|ZP_05128990.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3] gi|219674437|gb|EED30805.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++ IC + RV L E ++ +R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICAASGVEESARVGDLSEDQLDVLRNKV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116 >gi|189183973|ref|YP_001937758.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda] gi|226712771|sp|B3CT27|RS13_ORITI RecName: Full=30S ribosomal protein S13 gi|189180744|dbj|BAG40524.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda] Length = 125 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+ VN+P KRV+ L YI+GIG ++Q IC ++ + ++V L E++ +R I Sbjct: 1 MARISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR + +NIK+ D+ CY GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|157377429|ref|YP_001476029.1| 30S ribosomal protein S13 [Shewanella sediminis HAW-EB3] gi|189044297|sp|A8G1C8|RS13_SHESH RecName: Full=30S ribosomal protein S13 gi|157319803|gb|ABV38901.1| ribosomal protein S13 [Shewanella sediminis HAW-EB3] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDQKHTVIALTGIFGIGRTRARAICATTSIAEDAKIKELSEAQIDTLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|305665114|ref|YP_003861401.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170] gi|88709866|gb|EAR02098.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170] Length = 124 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG S++I +K + + +V + E+ +IR+A+ Sbjct: 1 MARIAGIDIPKQKRGVIALTYIFGIGKSRSKEILDKAQVSEDTKVSDWNDDEIGRIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 -ALYTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163938143|ref|YP_001643027.1| 30S ribosomal protein S13 [Bacillus weihenstephanensis KBAB4] gi|229053981|ref|ZP_04195415.1| 30S ribosomal protein S13 [Bacillus cereus AH603] gi|226712695|sp|A9VPA2|RS13_BACWK RecName: Full=30S ribosomal protein S13 gi|163860340|gb|ABY41399.1| ribosomal protein S13 [Bacillus weihenstephanensis KBAB4] gi|228721399|gb|EEL72920.1| 30S ribosomal protein S13 [Bacillus cereus AH603] Length = 121 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRVV +L Y+ GIG +++ I + I E RV L E E+ +IR I Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKIITEAGISSETRVRDLSEDELGRIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ + NARTRK + + Sbjct: 61 DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|110833280|ref|YP_692139.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2] gi|123050727|sp|Q0VSI1|RS13_ALCBS RecName: Full=30S ribosomal protein S13 gi|110646391|emb|CAL15867.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++ IC I +V +L ++ IR + Sbjct: 1 MARIAGVNIPENKHTVISLTYIFGIGRTRAESICATTGIEQTAKVRELTGEQLDAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K Sbjct: 61 AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|294142911|ref|YP_003558889.1| 30S ribosomal protein S13 [Shewanella violacea DSS12] gi|22257036|sp|Q9S0R1|RS13_SHEVD RecName: Full=30S ribosomal protein S13 gi|5913929|dbj|BAA84522.1| ribosomal protein S13 [Shewanella violacea] gi|293329380|dbj|BAJ04111.1| ribosomal protein S13 [Shewanella violacea DSS12] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+A+ Sbjct: 1 MARIAGINIPDQKHTVIALTGIFGIGRTRARAICAATSIAEDAKIKELSEAQIDILREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|253581363|ref|ZP_04858589.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725] gi|251836727|gb|EES65261.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR I Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|190571567|ref|YP_001975925.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018969|ref|ZP_03334776.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226712803|sp|B3CN47|RS13_WOLPP RecName: Full=30S ribosomal protein S13 gi|190357839|emb|CAQ55295.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995078|gb|EEB55719.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 122 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL YIHGIG ++ IC I +RV +L + ++ +I I Sbjct: 1 MARIAGINVPVKKCVPFALTYIHGIGITTANIICRSCKIDERKRVLELQDEDIEKISSFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q Y +EG+LR+ VAM+IK LM++GCYRGLRHR+GLPVRGQRTHTNA+TRK K +A Sbjct: 61 RQKYVIEGELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQRTHTNAKTRKGRSKLPIAG 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|90416838|ref|ZP_01224767.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207] gi|90331185|gb|EAS46429.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207] Length = 118 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y+ GIG +++ IC + I + ++ L E+++ +R A+ Sbjct: 1 MARIAGVNIPDNKHAVISLTYVFGIGRPTARKICADVGIAEDTKIAALDEAQLDLLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +VEGDLRR +MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK + Sbjct: 61 GTN-EVEGDLRRENSMNIKRLMDLGCYRGLRHRRNLPVRGQRTKTNARTRKGPRRPI 116 >gi|87122793|ref|ZP_01078666.1| 30S ribosomal protein S13 [Marinomonas sp. MED121] gi|86161958|gb|EAQ63250.1| 30S ribosomal protein S13 [Marinomonas sp. MED121] Length = 118 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + Q+R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICASTGVAESAKIGSLSDEVLDQLRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++M+IKRLMD+GC+RG+RHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRRELSMSIKRLMDMGCHRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|189347679|ref|YP_001944208.1| 30S ribosomal protein S13 [Chlorobium limicola DSM 245] gi|226712711|sp|B3EGW6|RS13_CHLL2 RecName: Full=30S ribosomal protein S13 gi|189341826|gb|ACD91229.1| ribosomal protein S13 [Chlorobium limicola DSM 245] Length = 125 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 64/120 (53%), Positives = 82/120 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I PER++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRTSAENILQRAGIAPERKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 DY+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K +K+ Sbjct: 62 DYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKTVAGKKK 121 >gi|32034697|ref|ZP_00134835.1| COG0099: Ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209245|ref|YP_001054470.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae L20] gi|158706211|sp|A3N379|RS13_ACTP2 RecName: Full=30S ribosomal protein S13 gi|126098037|gb|ABN74865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 118 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC I + ++ +L E ++ ++R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAVTGIAEDVKIRELSEEQIEKLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|193214823|ref|YP_001996022.1| 30S ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110] gi|226712715|sp|B3QYE7|RS13_CHLT3 RecName: Full=30S ribosomal protein S13 gi|193088300|gb|ACF13575.1| ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110] Length = 125 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 79/115 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGV++PR K VV L Y++GIG +++ I K +P +++V ++ + E +IR + Sbjct: 2 RIAGVDLPRNKHVVIGLTYVYGIGRTTAKKILAKAGVPEDKKVSEVTDDEANEIRTIVTN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y+VEG R + IKRLMD+GCYRGLRHRRGLP RGQRT TNARTRK K Sbjct: 62 EYKVEGQARSEQQLAIKRLMDIGCYRGLRHRRGLPARGQRTRTNARTRKGKRKTV 116 >gi|34541517|ref|NP_905996.1| 30S ribosomal protein S13 [Porphyromonas gingivalis W83] gi|188995708|ref|YP_001929960.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277] gi|81416929|sp|Q7MTN7|RS13_PORGI RecName: Full=30S ribosomal protein S13 gi|226712775|sp|B2RLW8|RS13_PORG3 RecName: Full=30S ribosomal protein S13 gi|34397834|gb|AAQ66895.1| ribosomal protein S13 [Porphyromonas gingivalis W83] gi|188595388|dbj|BAG34363.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277] Length = 126 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR AL YI+GIG S+ I +K + + +V + + IR Sbjct: 1 MAIRIVGVDLPQNKRGFIALTYIYGIGRSSAITILDKAGVDRDIKVKDWSDDQAAAIRDV 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I Y+VEGDLR V +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 61 IGAGYKVEGDLRSEVQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKG 113 >gi|257470857|ref|ZP_05634947.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185] gi|317065060|ref|ZP_07929545.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185] gi|313690736|gb|EFS27571.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185] Length = 118 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG +SQ + + + + RV L E EV +IR + Sbjct: 1 MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +VEGDLR+ V ++IKRLMD+ CYRGLRH+ LPVRGQ + TNART K K Sbjct: 61 ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116 >gi|15674052|ref|NP_268227.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403] gi|116513029|ref|YP_811936.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris SK11] gi|125625117|ref|YP_001033600.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris MG1363] gi|281492734|ref|YP_003354714.1| 50S ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147] gi|61236823|sp|P0A4A9|RS13_LACLA RecName: Full=30S ribosomal protein S13 gi|122939923|sp|Q02W49|RS13_LACLS RecName: Full=30S ribosomal protein S13 gi|158706241|sp|A2RNM9|RS13_LACLM RecName: Full=30S ribosomal protein S13 gi|12725122|gb|AAK06168.1|AE006436_17 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403] gi|116108683|gb|ABJ73823.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. cremoris SK11] gi|124493925|emb|CAL98920.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris MG1363] gi|281376386|gb|ADA65872.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147] gi|300071925|gb|ADJ61325.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris NZ9000] gi|326407606|gb|ADZ64677.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis CV56] Length = 121 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR AGV+IP KR+V +L Y+ G+G ++S+ + + + R L + IR+ + Sbjct: 1 MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSDQEDAIRREL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++EGDLRR V++NIKRLM++G YRG+RHRRGLP RGQ T NARTRK K + Sbjct: 61 D-GLKLEGDLRREVSLNIKRLMEIGSYRGMRHRRGLPTRGQNTKNNARTRKGPAKSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|42526301|ref|NP_971399.1| 30S ribosomal protein S13 [Treponema denticola ATCC 35405] gi|81570369|sp|Q73PL0|RS13_TREDE RecName: Full=30S ribosomal protein S13 gi|41816413|gb|AAS11280.1| ribosomal protein S13 [Treponema denticola ATCC 35405] gi|325473244|gb|EGC76439.1| 30S ribosomal protein S13 [Treponema denticola F0402] Length = 121 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P K V +L YI+GI S+ IC + P ++++ L E+E+ IR+ I Sbjct: 1 MARIAGVDLP-NKHVNVSLTYIYGISTSSANKICEATKVDPMKKMNDLDEAELAAIREVI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 +++Y+VEG LR VA+NIKRL D+GCYRG RHR+GLPVRGQRT TNARTR Sbjct: 60 DREYKVEGRLRTEVALNIKRLQDIGCYRGQRHRKGLPVRGQRTRTNARTR 109 >gi|226953893|ref|ZP_03824357.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244] gi|294651612|ref|ZP_06728916.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194] gi|226835376|gb|EEH67759.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244] gi|292822461|gb|EFF81360.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194] Length = 118 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGIAGTTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|32477616|ref|NP_870610.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1] gi|81658839|sp|Q7UIC7|RS13_RHOBA RecName: Full=30S ribosomal protein S13 gi|32448170|emb|CAD77687.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1] Length = 127 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 77/121 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K++ +L Y++G+G ++++C KL I P + + +V +I + Sbjct: 1 MPRLMGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY VEG LRR V NI R+ ++ YRG+RHR LPVRGQRT TNARTRK K + Sbjct: 61 ERDYLVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRKGPRKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|15892907|ref|NP_360621.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7] gi|22257033|sp|Q92GY8|RS13_RICCN RecName: Full=30S ribosomal protein S13 gi|15620098|gb|AAL03522.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7] Length = 125 Score = 163 bits (415), Expect = 5e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELIGLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|291277245|ref|YP_003517017.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198] gi|290964439|emb|CBG40289.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198] Length = 120 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 70/120 (58%), Positives = 87/120 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL +I+GIG K S+DI N + I ++RVH L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTHIYGIGLKISRDILNAVNISFDKRVHDLSEDEVSAIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QESYMVEGDLRKKVQMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|119358167|ref|YP_912811.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides DSM 266] gi|158706222|sp|A1BJ10|RS13_CHLPD RecName: Full=30S ribosomal protein S13 gi|119355516|gb|ABL66387.1| SSU ribosomal protein S13P [Chlorobium phaeobacteroides DSM 266] Length = 125 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 63/120 (52%), Positives = 82/120 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S++ I + I PER++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTSAKSILQRAGIAPERKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 DY+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K +K+ Sbjct: 62 DYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKTVAGKKK 121 >gi|225011669|ref|ZP_03702107.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A] gi|225004172|gb|EEG42144.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A] Length = 124 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IP+ KR V AL YI GIG +Q I + ++V + + E +IR+ + Sbjct: 1 MARISGVDIPKQKRGVIALTYIFGIGKSRAQSILETAKVDENKKVSEWSDDETGRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++EG+LR V +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GS-FKIEGELRSEVQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|85713164|ref|ZP_01044196.1| Ribosomal protein S13 [Idiomarina baltica OS145] gi|85693034|gb|EAQ31000.1| Ribosomal protein S13 [Idiomarina baltica OS145] Length = 118 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+GIG S IC I + ++ L E ++ +R+A+ Sbjct: 1 MARIAGINVPDNKHAVIALTAIYGIGRTRSSAICEAAGIAEDTQIGTLSEEKLDVLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|56460994|ref|YP_156275.1| 30S ribosomal protein S13 [Idiomarina loihiensis L2TR] gi|81362955|sp|Q5QXV5|RS13_IDILO RecName: Full=30S ribosomal protein S13 gi|56180004|gb|AAV82726.1| Ribosomal protein S13 [Idiomarina loihiensis L2TR] Length = 118 Score = 163 bits (415), Expect = 6e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+G+G SQ I I + ++ L E ++ +R A+ Sbjct: 1 MARIAGINVPDNKHAVIALTAIYGVGRTRSQQILAATGIAEDTKIGSLSEDKLDALRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 SK-FAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|254429054|ref|ZP_05042761.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881] gi|196195223|gb|EDX90182.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881] Length = 118 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG + IC I +V +L ++ IR + Sbjct: 1 MARIAGVNIPENKHTVISLTYIFGIGRTRAASICVATGIEQTAKVRELTGEQLDAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK K Sbjct: 61 AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRKGPRKPI 116 >gi|119946249|ref|YP_943929.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37] gi|119947104|ref|YP_944784.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37] gi|158706266|sp|A1SXW5|RS13_PSYIN RecName: Full=30S ribosomal protein S13 gi|119864853|gb|ABM04330.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37] gi|119865708|gb|ABM05185.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37] Length = 118 Score = 163 bits (414), Expect = 6e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I GIG SQ IC I ++ L E+++ +R + Sbjct: 1 MARIAGINVPDHKHAVIALTAIFGIGKTRSQIICAASGIAESTKLKDLDETQIEALRTEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK K Sbjct: 61 AT-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRKGPRKAI 116 >gi|254455733|ref|ZP_05069162.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211] gi|207082735|gb|EDZ60161.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211] Length = 127 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 66/121 (54%), Positives = 89/121 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP+ K V L YI+GIG K S IC+ L IP +R+++L + E+++IR+ I Sbjct: 1 MARIAGINIPQNKLVHIGLTYIYGIGDKFSNQICSSLEIPRAKRINELTDDEILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q+++VEGDLRR +++IKRL+DL CYRG RHR+ LPVRGQRT NARTRK + Sbjct: 61 DQNFKVEGDLRRDYSLSIKRLIDLACYRGTRHRKKLPVRGQRTRCNARTRKGKAIAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|119029440|gb|ABL59937.1| 30S ribosomal protein S13 [uncultured bacterium] Length = 119 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GVNIP K V L I+GIG S+ IC + P+ +V L E E+ +IR I Sbjct: 1 MARIVGVNIPVKKHVEIGLTSIYGIGRVSASKICQVAGVNPQTKVGSLTEEELDKIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR VAMN+KRL+++G YRGLRHRRGLPVRGQRT TNARTRK G+ + Sbjct: 61 NK-YTTEGDLRREVAMNVKRLIEIGAYRGLRHRRGLPVRGQRTKTNARTRKGKGRRIAVK 119 >gi|302036690|ref|YP_003797012.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii] gi|300604754|emb|CBK41086.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii] Length = 129 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 90/121 (74%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ L Y++GIG ++Q I K + RV + E ++++IR+ I Sbjct: 1 MARIAGVDLPKDKRIDIGLTYVYGIGRVAAQVILKKAGVDGSIRVKDVSEDKIVKIREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY+VEGDLR+ V+MNIKRL+D G +RGLRHR+GLPVRGQRT TNARTRK + GV Sbjct: 61 ERDYRVEGDLRKEVSMNIKRLVDTGTFRGLRHRKGLPVRGQRTKTNARTRKG-RRSGVGS 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|120597011|ref|YP_961585.1| 30S ribosomal protein S13 [Shewanella sp. W3-18-1] gi|146294819|ref|YP_001185243.1| 30S ribosomal protein S13 [Shewanella putrefaciens CN-32] gi|158706278|sp|A1RED6|RS13_SHESW RecName: Full=30S ribosomal protein S13 gi|166231925|sp|A4YBW1|RS13_SHEPC RecName: Full=30S ribosomal protein S13 gi|120557104|gb|ABM23031.1| SSU ribosomal protein S13P [Shewanella sp. W3-18-1] gi|145566509|gb|ABP77444.1| SSU ribosomal protein S13P [Shewanella putrefaciens CN-32] gi|319424602|gb|ADV52676.1| 30S ribosomal protein S13 [Shewanella putrefaciens 200] Length = 118 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDTLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|254785101|ref|YP_003072529.1| 30S ribosomal protein S13 [Teredinibacter turnerae T7901] gi|259494692|sp|C5BQ83|RS13_TERTT RecName: Full=30S ribosomal protein S13 gi|237684688|gb|ACR11952.1| ribosomal protein S13 [Teredinibacter turnerae T7901] Length = 118 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y+ GIG +++ IC + ++ L ++++ +IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVFGIGKTTAKQICAATGVAESTKISALDDAKMDEIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK K Sbjct: 61 AK-HTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRKGPRKPI 116 >gi|157826041|ref|YP_001493761.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford] gi|166231919|sp|A8GPC8|RS13_RICAH RecName: Full=30S ribosomal protein S13 gi|157799999|gb|ABV75253.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford] Length = 125 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L Y++G+G + +ICNK I +++ +L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYVYGLGPAMAAEICNKAKISKDKKAKELTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|78776525|ref|YP_392840.1| 30S ribosomal protein S13 [Sulfurimonas denitrificans DSM 1251] gi|91207632|sp|Q30TS6|RS13_SULDN RecName: Full=30S ribosomal protein S13 gi|78497065|gb|ABB43605.1| SSU ribosomal protein S13P [Sulfurimonas denitrificans DSM 1251] Length = 120 Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 63/119 (52%), Positives = 83/119 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR+ L Y++GIG +S+ I + I +RV++L E ++ I + I Sbjct: 1 MARISGVDLPKKKRIEYGLTYVYGIGLHASRKILDATGIDYNKRVYELNEDDIAAITKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK K A Sbjct: 61 RASHVVEGDLRKQVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119 >gi|298531063|ref|ZP_07018464.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans ASO3-1] gi|298509086|gb|EFI32991.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans ASO3-1] Length = 122 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 61/113 (53%), Positives = 81/113 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ K++ +L YI+GIG ++ I + + R+ +L EV IR + Sbjct: 1 MARIAGVDLPKRKKIGISLTYIYGIGRTTALKILDASGVDWTRKTEELTSDEVNVIRGEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 E +Y+VEGDLRR + +IKRLMD+GCYRGLRHRR +PVRGQRTHTNAR RK Sbjct: 61 ENNYKVEGDLRREKSADIKRLMDIGCYRGLRHRRSMPVRGQRTHTNARIRKGP 113 >gi|212550429|ref|YP_002308746.1| 30S ribosomal protein S13 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226712690|sp|B6YQ63|RS13_AZOPC RecName: Full=30S ribosomal protein S13 gi|212548667|dbj|BAG83335.1| 30S ribosomal protein S13 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 126 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 79/121 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI GV++P+ KR AL YI+GIG S I + I + R+ + +V +R+ I Sbjct: 3 VRILGVDLPQNKRGEIALTYIYGIGCGLSSKILTEAGIDRDTRIKDWTDVQVAAVREIIS 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++++VEGDLR + +NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK K +K Sbjct: 63 RNFKVEGDLRSEIQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKGKRKTVANKK 122 Query: 122 R 122 R Sbjct: 123 R 123 >gi|324999249|ref|ZP_08120361.1| 30S ribosomal protein S13 [Pseudonocardia sp. P1] Length = 126 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 59/117 (50%), Positives = 80/117 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI G+G S++I AI + R L + +V ++R I Sbjct: 1 MARVAGVDLPREKRMEIALTYIFGVGRARSKEILEATAISADLRSKDLTDEDVTKLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E+ QVEGDLRR + +I+R +++G Y+G+RHRRGLPVRGQRT TNAR RK K Sbjct: 61 EEHLQVEGDLRREIQADIRRKIEIGSYQGIRHRRGLPVRGQRTKTNARGRKGPKKTV 117 >gi|78186092|ref|YP_374135.1| 30S ribosomal protein S13 [Chlorobium luteolum DSM 273] gi|91207712|sp|Q3B6D9|RS13_PELLD RecName: Full=30S ribosomal protein S13 gi|78165994|gb|ABB23092.1| SSU ribosomal protein S13P [Chlorobium luteolum DSM 273] Length = 125 Score = 163 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 59/120 (49%), Positives = 81/120 (67%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG +++ I + I P+R++ L ++E IR+ + + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGNTTAKTILKRAGIAPDRKISDLNDAEAHAIRELVAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +Y+VEG R + IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK K +K+ Sbjct: 62 EYKVEGQARGEQQLAIKRLMDIGCYRGLRHRRSLPVRGQNTQTNARTRKGKRKTVAGKKK 121 >gi|167957549|ref|ZP_02544623.1| 30S ribosomal protein S13 [candidate division TM7 single-cell isolate TM7c] Length = 128 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 64/112 (57%), Positives = 77/112 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV IP K+V +L YI+GIG K ++DI I P RV L E+E +IR I Sbjct: 1 MARISGVVIPSEKQVQISLTYIYGIGPKYARDILAAAKIEPTTRVKDLTEAEEQKIRDII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + +Y EGDL+R V NIKRL D+ YRGLRH+ GLPVRGQRT TNARTRK Sbjct: 61 DNNYTTEGDLQRLVTNNIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRKG 112 >gi|260549818|ref|ZP_05824034.1| ribosomal protein S13 [Acinetobacter sp. RUH2624] gi|293610846|ref|ZP_06693146.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024] gi|260407068|gb|EEX00545.1| ribosomal protein S13 [Acinetobacter sp. RUH2624] gi|292827190|gb|EFF85555.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024] Length = 118 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|114561358|ref|YP_748871.1| 30S ribosomal protein S13 [Shewanella frigidimarina NCIMB 400] gi|122301096|sp|Q089N2|RS13_SHEFN RecName: Full=30S ribosomal protein S13 gi|114332651|gb|ABI70033.1| SSU ribosomal protein S13P [Shewanella frigidimarina NCIMB 400] Length = 118 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC +I + ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTSIAEDAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|229917333|ref|YP_002885979.1| ribosomal protein S13 [Exiguobacterium sp. AT1b] gi|259494678|sp|C4KZM1|RS13_EXISA RecName: Full=30S ribosomal protein S13 gi|229468762|gb|ACQ70534.1| ribosomal protein S13 [Exiguobacterium sp. AT1b] Length = 121 Score = 163 bits (413), Expect = 8e-39, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+V +L YI+GIG +Q+I + E R L E E+ +IR+AI Sbjct: 1 MARIAGVDIPREKRIVISLTYIYGIGKTKAQEILKAANVSEETRTRDLTEDELNRIREAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ T N+RTRK + + Sbjct: 61 D-GIKVEGDLRREVSLNIKRLIEIGAYRGIRHRRSLPVRGQNTKNNSRTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|39938711|ref|NP_950477.1| 30S ribosomal protein S13 [Onion yellows phytoplasma OY-M] gi|81402506|sp|Q6YQZ7|RS13_ONYPE RecName: Full=30S ribosomal protein S13 gi|39721820|dbj|BAD04310.1| ribosomal protein S13 [Onion yellows phytoplasma OY-M] Length = 121 Score = 163 bits (413), Expect = 9e-39, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K S I N+L I RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELNIDQNIRVKNLTEQQLSALRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K K + Sbjct: 61 TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|307297370|ref|ZP_07577176.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916630|gb|EFN47012.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2] Length = 122 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 57/121 (47%), Positives = 78/121 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K+ AL YI+GIG+ S +I + I +R L + EV +I + I Sbjct: 1 MARILGVELPNNKKTFVALTYIYGIGYTRSNEILSGTEIDGNKRAKDLTDEEVSKIAKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEG+LR V +IKRL+++G YRG RHR GLPVRGQ+TH+N RTRK + + Sbjct: 61 NEHYKVEGELRTEVDRSIKRLIEIGSYRGYRHRNGLPVRGQKTHSNGRTRKGSRASKIRK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|224510714|pdb|3FIH|M Chain M, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry Consists Of The 30s Subunit, Trnas And The Ternary Complex. gi|294662229|pdb|2WWL|M Chain M, E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. This File Contains The 30s, The P-Site Trna And The Tnac Leader Peptide (Part 1 Of 2). gi|308387998|pdb|3OFP|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Erythromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320056|pdb|3OFB|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Chloramphenicol. This File Contains The 30s Subunit Of The Second 70s Ribosome. gi|309320160|pdb|3OFY|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Clindamycin. This File Contains The 30s Subunit Of The Second 70s Ribosome gi|315113645|pdb|3OAR|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To Telithromycin. This File Contains The 30s Subunit Of The Second 70s Ribosome Length = 113 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 1/114 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 113 >gi|152998249|ref|YP_001343084.1| 30S ribosomal protein S13 [Marinomonas sp. MWYL1] gi|189044280|sp|A6W370|RS13_MARMS RecName: Full=30S ribosomal protein S13 gi|150839173|gb|ABR73149.1| ribosomal protein S13 [Marinomonas sp. MWYL1] Length = 118 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI GIG S+ IC + ++ L + + ++R + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICAATGVAETAKIGSLSDDVLDELRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|257067036|ref|YP_003153292.1| 30S ribosomal protein S13 [Anaerococcus prevotii DSM 20548] gi|256798916|gb|ACV29571.1| ribosomal protein S13 [Anaerococcus prevotii DSM 20548] Length = 114 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y +EGDLRR V+MNI+ L ++G YRGLRH+ LPVRGQ T NARTRK Sbjct: 61 -NNYHIEGDLRREVSMNIRSLREIGSYRGLRHKNNLPVRGQNTKNNARTRKG 111 >gi|256820005|ref|YP_003141284.1| 30S ribosomal protein S13 [Capnocytophaga ochracea DSM 7271] gi|256581588|gb|ACU92723.1| ribosomal protein S13 [Capnocytophaga ochracea DSM 7271] Length = 124 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDEEITRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK K + Sbjct: 61 AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|289209307|ref|YP_003461373.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix] gi|288944938|gb|ADC72637.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix] Length = 118 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AG+NIP K V AL I+GIG ++ IC + PE +V L ++EV +R I Sbjct: 1 MARVAGINIPDQKHTVVALTAIYGIGPTRARQICEAAGVRPEIKVRDLTDAEVDALRAQI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ VEGDLRR ++MNIKRLMDLGCYRG+RHRRGLP+RGQ+T TNARTRK + Sbjct: 61 DR-IPVEGDLRREISMNIKRLMDLGCYRGVRHRRGLPLRGQQTQTNARTRKGPRRPI 116 >gi|33357890|pdb|1P6G|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp State Of E. Coli 70s Ribosome gi|33357967|pdb|1P87|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted Into The Low Resolution Cryo-Em Map Of The Initiation-Like State Of E. Coli 70s Ribosome gi|83754051|pdb|2AVY|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|83754107|pdb|2AW7|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli At 3.5 A Resolution. This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138065|pdb|2I2P|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|118138136|pdb|2I2U|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The Anticodon Stem-Loop Of P-Site Trna. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|157836035|pdb|2QOU|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836092|pdb|2QOW|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836139|pdb|2QOY|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|157836196|pdb|2QP0|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Spectinomycin And Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Spectinomycin And Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|158429710|pdb|2QAL|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429762|pdb|2QAN|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Neomycin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Neomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429820|pdb|2QB9|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429872|pdb|2QBB|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429924|pdb|2QBD|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158429976|pdb|2QBF|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430030|pdb|2QBH|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158430083|pdb|2QBJ|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Gentamicin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Gentamicin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431383|pdb|2Z4K|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The First 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|158431436|pdb|2Z4M|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Paromomycin And Ribosome Recycling Factor (Rrf). This File Contains The 30s Subunit Of The Second 70s Ribosome, With Paromomycin Bound. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. gi|168988800|pdb|2VHO|M Chain M, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 3 Of 4) gi|168988821|pdb|2VHP|M Chain M, Structure Of Pdf Binding Helix In Complex With The Ribosome (Part 4 Of 4) gi|197107290|pdb|3DF1|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The First 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|197107342|pdb|3DF3|M Chain M, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With Hygromycin B. This File Contains The 30s Subunit Of The Second 70s Ribosome, With Hygromycin B Bound. The Entire Crystal Structure Contains Two 70s Ribosomes. gi|329666004|pdb|3J00|M Chain M, Structure Of The Ribosome-Secye Complex In The Membrane Environment Length = 117 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 1 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 115 >gi|167752409|ref|ZP_02424536.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216] gi|167660650|gb|EDS04780.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216] Length = 126 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV++P+ KR L YI+GIG +++ I ++ I + +V + +V IR I Sbjct: 1 MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILDEAGISYDLKVQDWSDEQVGAIRSKI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + +VEG+ R V +NIKRLMD+GCYRG+RHR GLPVRGQ T NARTRK Sbjct: 61 ADMGIKVEGECRSVVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKG 113 >gi|134103234|ref|YP_001108895.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] gi|291007974|ref|ZP_06565947.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] gi|158706274|sp|A4FPJ5|RS13_SACEN RecName: Full=30S ribosomal protein S13 gi|133915857|emb|CAM05970.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338] Length = 125 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S++I I + R L + ++ ++R+A+ Sbjct: 1 MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILRATDISFDVRPKDLDDDQLAKLREAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E +Y++EGDLRR V +I+R +++GCY+GLRHRR LPV GQRT TNARTRK K Sbjct: 61 E-NYRLEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKKTV 116 >gi|563203|gb|AAB17598.1| ribosomal protein S13 [Mycobacterium bovis] gi|1589487|prf||2211287D ribosomal protein S13 Length = 123 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 59/114 (51%), Positives = 77/114 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MDRLVGVDLPRHKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPK 114 >gi|148284193|ref|YP_001248283.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong] gi|158706339|sp|A5CCJ1|RS13_ORITB RecName: Full=30S ribosomal protein S13 gi|146739632|emb|CAM79421.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong] Length = 125 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+RI+ VN+P KRV+ L YI+GIG ++Q IC ++ + ++V L E++ +R I Sbjct: 1 MSRISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y+VEGDLRR + +NIK+ D+ CY GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254446003|ref|ZP_05059479.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235] gi|198260311|gb|EDY84619.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235] Length = 123 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L YI+GIG S+ I + I P+ R L E ++ I I Sbjct: 1 MPRILGVDIPANKKLEYSLRYIYGIGPTRSKTILAQTGIDPDMRAKNLDEEQINAIMAKI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 ++ VEGDLRR + N+KRL + CYRGLRHRRGLPVRGQRT TNARTRK K + Sbjct: 61 QELQLVVEGDLRRELTSNMKRLQAINCYRGLRHRRGLPVRGQRTKTNARTRKGKLKTIGS 120 Query: 120 RKR 122 ++ Sbjct: 121 LRK 123 >gi|331004908|ref|ZP_08328324.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989] gi|330421295|gb|EGG95545.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989] Length = 118 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 85/117 (72%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L Y++GIG +++ I ++ I ++ +L E+++ +IR + Sbjct: 1 MARIAGVNIPDHKHAVISLTYVYGIGSTTAKRILAEVGIAEATKISELSETDMDRIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AKE-TVEGDLRREVSMNIKRLMDLGCYRGIRHRRNLPLRGQRTKTNARTRKGPRKPI 116 >gi|313204941|ref|YP_004043598.1| SSU ribosomal protein s13p [Paludibacter propionicigenes WB4] gi|312444257|gb|ADQ80613.1| SSU ribosomal protein S13P [Paludibacter propionicigenes WB4] Length = 126 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/113 (49%), Positives = 74/113 (65%), Gaps = 1/113 (0%) Query: 1 MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 MA RI GV++P+ KR L YI+GIG S++ I + + +V + + +IR+ Sbjct: 1 MAIRIVGVDLPQNKRGEVGLTYIYGIGRSSAKKILESAGVDIDIKVKDWTDDQAAKIREI 60 Query: 60 IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 I ++VEGDLR V NIKRLMD+GCYRG+RHR GLP+RGQ T NARTRK Sbjct: 61 IGAGFKVEGDLRSEVQTNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRKG 113 >gi|213962874|ref|ZP_03391134.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno] gi|213954531|gb|EEB65853.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno] Length = 124 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEISRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK K + Sbjct: 61 AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|109897336|ref|YP_660591.1| 30S ribosomal protein S13 [Pseudoalteromonas atlantica T6c] gi|122972199|sp|Q15X51|RS13_PSEA6 RecName: Full=30S ribosomal protein S13 gi|109699617|gb|ABG39537.1| SSU ribosomal protein S13P [Pseudoalteromonas atlantica T6c] gi|332175077|gb|AEE24331.1| 30S ribosomal protein S13 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 118 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I G+G +Q IC + ++ L E+++ ++R + Sbjct: 1 MARIAGINIPEHKHTVIALTAIFGVGSTRAQSICEAAGVAETTKIKDLDEAQIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKAI 116 >gi|302524018|ref|ZP_07276360.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4] gi|302432913|gb|EFL04729.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4] Length = 126 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 56/117 (47%), Positives = 83/117 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV++PR KR+ AL YI+GIG S+ + + + RV L + ++++++ I Sbjct: 1 MARLAGVDLPREKRLEIALTYIYGIGRTRSKQMIAAAELNADTRVKDLSDEDLVKLKDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +++++VEGDLRR V +I+R +++G Y+GLR RRGLPVRGQRT TNARTRK K Sbjct: 61 DENFKVEGDLRREVNADIRRKIEIGTYQGLRWRRGLPVRGQRTKTNARTRKGPKKTV 117 >gi|310779571|ref|YP_003967904.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926] gi|309748894|gb|ADO83556.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926] Length = 118 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG +SQ + + + RV L E E+ ++R I Sbjct: 1 MARIAGVDIPRNKRIEIALTYIYGIGKSTSQKVLKEAGVDFNTRVKDLTEEELNKVRAII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + +VEGDLR+ V +++KRLMD+ CYRGLRH+ LPVRGQ++ TNART K K Sbjct: 61 DT-VKVEGDLRKDVRLSVKRLMDIRCYRGLRHKMNLPVRGQKSKTNARTVKGPKKPI 116 >gi|315225423|ref|ZP_07867237.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287] gi|314944696|gb|EFS96731.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287] Length = 124 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++I ++ + + +V + + E+ +IR+ + Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEITRIREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Y++EG+LR + +NIKRLMD+GCYRG+RHR GLP+RGQ+T N+RTRK K + Sbjct: 61 AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|54307563|ref|YP_128583.1| 30S ribosomal protein S13 [Photobacterium profundum SS9] gi|81615623|sp|Q6LV94|RS13_PHOPR RecName: Full=30S ribosomal protein S13 gi|46911983|emb|CAG18781.1| putative ribosomal protein S13 [Photobacterium profundum SS9] Length = 118 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ + + I ++ +L E ++ +R+ + Sbjct: 1 MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLREGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|30468201|ref|NP_849088.1| ribosomal protein S13 [Cyanidioschyzon merolae strain 10D] gi|32363230|sp|P59758|RR13_CYAME RecName: Full=30S ribosomal protein S13, chloroplastic gi|30409301|dbj|BAC76250.1| 30S ribosomal protein S13 [Cyanidioschyzon merolae strain 10D] Length = 123 Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 58/119 (48%), Positives = 82/119 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGV++P K++ AL Y++GIG +++I + P+ RV + + + +++RQ IEQ Sbjct: 2 RIAGVDLPSQKKLEVALTYLYGIGKTLAKEILEACQLSPDLRVRDVNDEQSMRLRQYIEQ 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 Y +E DL+R +MNIKRLMD+GCYRG RHR LPVRGQRT +NARTR+ K +K Sbjct: 62 KYLIESDLKRVESMNIKRLMDIGCYRGRRHRALLPVRGQRTRSNARTRRGAKKTVAGKK 120 >gi|162446982|ref|YP_001620114.1| 30S ribosomal protein S13 [Acholeplasma laidlawii PG-8A] gi|189040489|sp|A9NEF8|RS13_ACHLI RecName: Full=30S ribosomal protein S13 gi|161985089|gb|ABX80738.1| small subunit ribosomal protein S13 [Acholeplasma laidlawii PG-8A] Length = 124 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L YI+GIG ++Q++ + + RV L + ++ IR + Sbjct: 1 MARIAGVDIPTQKRVVISLQYIYGIGQTTAQEVLKNANVSEDIRVKDLNDDQLSAIRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + EGDLRR +NIKRLM++G YRG+RHR+GLPV GQ T NARTRK K + Sbjct: 61 AK-IVTEGDLRRESTLNIKRLMEIGSYRGIRHRKGLPVNGQNTRNNARTRKGKPKAVTGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|308048013|ref|YP_003911579.1| 30S ribosomal protein S13P [Ferrimonas balearica DSM 9799] gi|307630203|gb|ADN74505.1| SSU ribosomal protein S13P [Ferrimonas balearica DSM 9799] Length = 118 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC + I + + L E+ + ++R+ + Sbjct: 1 MARIAGINIPEHKHAVVALTAIFGIGQTRAKAICVEAGIAEDVKFKDLDEATIDKVREVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Q + VEGDLRR ++MNIKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 GQ-FTVEGDLRREISMNIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|299768688|ref|YP_003730714.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1] gi|298698776|gb|ADI89341.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1] Length = 118 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|193211875|ref|YP_001997828.1| 30S ribosomal protein S13 [Chlorobaculum parvum NCIB 8327] gi|226712712|sp|B3QR95|RS13_CHLP8 RecName: Full=30S ribosomal protein S13 gi|193085352|gb|ACF10628.1| ribosomal protein S13 [Chlorobaculum parvum NCIB 8327] Length = 125 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 79/115 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL Y++GIG S+++I K + P++++ +L + E IR+ I Sbjct: 2 RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +Y VEG+ R ++IKRLMD+GCYRGLRHRR LP RGQRT TNARTRK K Sbjct: 62 EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPARGQRTRTNARTRKGKRKTV 116 >gi|329298512|ref|ZP_08255848.1| 30S ribosomal protein S13 [Plautia stali symbiont] Length = 118 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NI K V AL I GIG S+ IC + I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINISDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 61 GK-FVVEGDLRRKITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116 >gi|330723974|gb|AEC46344.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis MCLD] Length = 122 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KRVV AL YI GIG S++I K I R L ES++ IR+ + Sbjct: 1 MARILNIEIPNDKRVVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +DY EGDLRR V +NIKR++++ Y+G+RHR+GLPVRGQ T NARTRK K + + Sbjct: 60 AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRKGPRKTVMGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|237753000|ref|ZP_04583480.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430] gi|229375267|gb|EEO25358.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430] Length = 122 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+G+G K+S+DI N + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGVGLKTSRDILNAVKISYDKRVQDLSEDEVSSIAKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K + Sbjct: 61 QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|90414978|ref|ZP_01222940.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK] gi|90323917|gb|EAS40517.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK] Length = 118 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG S+ + + I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|71083783|ref|YP_266503.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062] gi|91763181|ref|ZP_01265145.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002] gi|91207713|sp|Q4FLN9|RS13_PELUB RecName: Full=30S ribosomal protein S13 gi|71062896|gb|AAZ21899.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062] gi|91717594|gb|EAS84245.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002] Length = 127 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP+ K V L YI+GIG K S IC L IP +R+++L + ++++IR+ I Sbjct: 1 MARIAGVNIPQNKLVHIGLTYIYGIGNKFSSQICTSLEIPKAKRINELTDEDILKIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +++VEGDLRR ++ IKRL+DL CYRG RHR+ LPVRGQRT NARTRK + Sbjct: 61 DANFKVEGDLRRDYSLTIKRLIDLACYRGSRHRKKLPVRGQRTRCNARTRKGKAIAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|34849415|gb|AAP58914.1| ribosomal protein S13 [Spiroplasma kunkelii CR2-3x] Length = 121 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KRVV AL YI+GIG SQ I + I + RV L E E+ IR I Sbjct: 1 MARIGGVDIPNDKRVVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ + NART K K + Sbjct: 61 AK-LKTEGDLRREVALNIKRLMEIGSYRGMRHRKSLPTRGQSSKQNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|91205855|ref|YP_538210.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C] gi|157826785|ref|YP_001495849.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389] gi|122425381|sp|Q1RHP3|RS13_RICBR RecName: Full=30S ribosomal protein S13 gi|166231920|sp|A8GVD5|RS13_RICB8 RecName: Full=30S ribosomal protein S13 gi|91069399|gb|ABE05121.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C] gi|157802089|gb|ABV78812.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389] Length = 125 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G ++ IC K I +++V L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ Y+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRKGKAVAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|262280203|ref|ZP_06057987.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202] gi|262257981|gb|EEY76715.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202] Length = 118 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L YI G+G ++++I + I ++ +L ++++ IR + Sbjct: 1 MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILTAVGITETTKIRELDDAQLDAIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|91216887|ref|ZP_01253851.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755] gi|91185048|gb|EAS71427.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755] Length = 124 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI GIG ++ + + + +V + ++ +IR + Sbjct: 1 MARIAGVDIPKQKRGVIALTYIFGIGNSRAKKVLKEAGVDESIKVSDWNDDQIGKIRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +EG+LR V ++IKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GKN-TIEGELRSQVQIHIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|47459094|ref|YP_015956.1| 30S ribosomal protein S13 [Mycoplasma mobile 163K] gi|81614321|sp|Q6KI31|RS13_MYCMO RecName: Full=30S ribosomal protein S13 gi|47458423|gb|AAT27745.1| 30S ribosomal protein s13 [Mycoplasma mobile 163K] Length = 122 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI V IP KRV+ +L Y++GIG S+ I + I RV L E ++ +IR I Sbjct: 1 MARILNVEIPNNKRVIISLTYVYGIGRSLSKQILAEANIDENIRVKDLSEEDLTKIRN-I 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 ASRFTTEGDLRREIQLNIKRLMEIKSYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|320526892|ref|ZP_08028082.1| 30S ribosomal protein S13 [Solobacterium moorei F0204] gi|320132860|gb|EFW25400.1| 30S ribosomal protein S13 [Solobacterium moorei F0204] Length = 121 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R AGV+IPR K + +L YI+GIG ++++I I R + L E++ IR+ I Sbjct: 1 MPRFAGVDIPRNKVIGVSLTYIYGIGPTTAKNILAACGIDENTRTNDLTEAQETAIREKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EGDLRR A++IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK + + Sbjct: 61 DA-IKTEGDLRRDRALDIKRLMEIGSYRGIRHRRGLPVRGQRTRTNARTRKGPRRTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|255069915|ref|XP_002507039.1| ribosomal protein S13, chloroplast precursor [Micromonas sp. RCC299] gi|226522314|gb|ACO68297.1| ribosomal protein S13, chloroplast precursor [Micromonas sp. RCC299] Length = 176 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP K+ AL Y++GIG +++ I K + +RV + E E+ +R ++ Sbjct: 58 ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGL-ENKRVREFEEEELTILRAEVD 116 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 Y +EGDLRR +NIKRL ++ CYRG RH RGLPVRGQRT TNARTRK K +K Sbjct: 117 T-YMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRKGKVKTVAGKK 175 Query: 122 R 122 + Sbjct: 176 K 176 >gi|271962661|ref|YP_003336857.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021] gi|270505836|gb|ACZ84114.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021] Length = 126 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 56/110 (50%), Positives = 78/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG + + + + RVHQL + E++ +R I Sbjct: 1 MARLVGVDLPRDKRLEIALTYIFGIGRTRALETLKATGVNGDLRVHQLTDEELVPLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y++EGDLRR V +I+R +++ CY+G+RHRRGLPV GQRT TNARTR Sbjct: 61 EANYKIEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVHGQRTQTNARTR 110 >gi|262277115|ref|ZP_06054908.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114] gi|262224218|gb|EEY74677.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114] Length = 127 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 86/121 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GVN+P K+V AL YI+GIG + IC +L I +RV+ L + EV++IR+ I Sbjct: 1 MARISGVNLPLNKQVHIALQYIYGIGDHYADKICKELNIEKSKRVNNLTDDEVLKIRELI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ + VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRT +NARTRK + Sbjct: 61 DEKFTVEGDLRREISLNIKRLRDLGTYRGTRHRKKLPVRGQRTSSNARTRKGKAIAIAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|284033974|ref|YP_003383905.1| 30S ribosomal protein S13 [Kribbella flavida DSM 17836] gi|283813267|gb|ADB35106.1| ribosomal protein S13 [Kribbella flavida DSM 17836] Length = 123 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI G+G + I ++RVH+L + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEVALTYIFGVGRTRALKTLEATGISGDKRVHELGDEELVKLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y++EGDLRR V +I+R +++G Y+G RHR GLPVRGQRT TNAR+RK K + Sbjct: 61 EGNYKIEGDLRREVTADIRRKIEIGSYQGRRHRSGLPVRGQRTRTNARSRKGRRKAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|282898336|ref|ZP_06306327.1| Ribosomal protein S13 [Raphidiopsis brookii D9] gi|281196867|gb|EFA71772.1| Ribosomal protein S13 [Raphidiopsis brookii D9] Length = 126 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 70/122 (57%), Positives = 88/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG + SQDI + P+ RV L ++++ +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|77165766|ref|YP_344291.1| 30S ribosomal protein S13 [Nitrosococcus oceani ATCC 19707] gi|254433474|ref|ZP_05046982.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27] gi|91207709|sp|Q3J8T5|RS13_NITOC RecName: Full=30S ribosomal protein S13 gi|76884080|gb|ABA58761.1| SSU ribosomal protein S13P [Nitrosococcus oceani ATCC 19707] gi|207089807|gb|EDZ67078.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27] Length = 118 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 64/115 (55%), Positives = 85/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC + +P ++++ L ++E+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALSSIYGIGLSRARKICGAVGVPSDKKIRDLSDNELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y VEGDLRR ++M+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK + Sbjct: 61 AK-YPVEGDLRREISMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRKGPRR 114 >gi|328478179|gb|EGF48022.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus MTCC 5462] Length = 126 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 63/121 (52%), Positives = 84/121 (69%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K++V AL YI+G+G ++Q + +P + R L + +IR A+ Sbjct: 1 MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T NARTRK + R Sbjct: 61 DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKQRWQVR 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|167945793|ref|ZP_02532867.1| 30S ribosomal protein S13 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 118 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K + AL I+G+G + IC I P ++ +L E+++ IR + Sbjct: 1 MARIAGVNIPDRKHAIIALTSIYGVGRTRAAGICEATGIAPSTKILELSEAQLEAIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+MNIKRLMDLGC RG+RHRRGLP+RGQRT TNARTRK + Sbjct: 61 AK-FTVEGDLRREVSMNIKRLMDLGCNRGIRHRRGLPLRGQRTKTNARTRKGPRRPI 116 >gi|119511157|ref|ZP_01630274.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414] gi|119464145|gb|EAW45065.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414] Length = 126 Score = 161 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L YI+GIG S +I + P+ RV L ++EV +R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYIYGIGLTRSLEILAATGVNPDTRVKDLSDAEVAALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR AM+IKRL+D+GCYRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLEAMSIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|75906936|ref|YP_321232.1| 30S ribosomal protein S13 [Anabaena variabilis ATCC 29413] gi|91207688|sp|Q3MF99|RS13_ANAVT RecName: Full=30S ribosomal protein S13 gi|75700661|gb|ABA20337.1| SSU ribosomal protein S13P [Anabaena variabilis ATCC 29413] Length = 126 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ+I + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLSDADVAALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|91791561|ref|YP_561212.1| 30S ribosomal protein S13 [Shewanella denitrificans OS217] gi|122969076|sp|Q12ST7|RS13_SHEDO RecName: Full=30S ribosomal protein S13 gi|91713563|gb|ABE53489.1| SSU ribosomal protein S13P [Shewanella denitrificans OS217] Length = 118 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTAIAETAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YSVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|218508351|ref|ZP_03506229.1| 30S ribosomal protein S13 [Rhizobium etli Brasil 5] Length = 111 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 78/107 (72%), Positives = 89/107 (83%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 V AL YIHGIG K +Q+I K+ IP ERRVHQL ++EV+QIR+AI++DYQVEGDLRR A Sbjct: 5 VIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAIDRDYQVEGDLRRETA 64 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK K +K+ Sbjct: 65 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK 111 >gi|160902231|ref|YP_001567812.1| ribosomal protein S13 [Petrotoga mobilis SJ95] gi|189044285|sp|A9BFZ3|RS13_PETMO RecName: Full=30S ribosomal protein S13 gi|160359875|gb|ABX31489.1| ribosomal protein S13 [Petrotoga mobilis SJ95] Length = 121 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 83/121 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV +P K + L YI+GIG K++ DI N L I P +R +L + E+ ++ I Sbjct: 1 MARILGVEVPDNKALFVGLTYIYGIGRKTALDILNNLEIDPNKRAKELTDDEISRLSHHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y+VEG+LR+ + NIKRL+D+G YRG RH+ GLPVRGQ+TH+NARTRK + + Sbjct: 61 NENYKVEGELRQEINKNIKRLIDIGSYRGKRHKAGLPVRGQKTHSNARTRKGPRLTKIKK 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|15604483|ref|NP_221001.1| 30S ribosomal protein S13 [Rickettsia prowazekii str. Madrid E] gi|6226062|sp|Q9ZCS7|RS13_RICPR RecName: Full=30S ribosomal protein S13 gi|3861177|emb|CAA15077.1| 30S RIBOSOMAL PROTEIN S13 (rpsM) [Rickettsia prowazekii] gi|292572265|gb|ADE30180.1| 30S ribosomal protein S13 [Rickettsia prowazekii Rp22] Length = 125 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V L + E+I +R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKKVKVLTDQELISLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDL+R V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|89891133|ref|ZP_01202641.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7] gi|89516777|gb|EAS19436.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7] Length = 124 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR +L YI+GIG ++ + + +++V + + E+ +IR AI Sbjct: 1 MARIAGVDIPKNKRGEVSLTYIYGIGRNRAKQVLIDTGVGLDKKVSEWNDDEIGKIRSAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EG+LR +NIKRLMD+GCYRG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GE-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|256821684|ref|YP_003145647.1| 30S ribosomal protein S13 [Kangiella koreensis DSM 16069] gi|256795223|gb|ACV25879.1| ribosomal protein S13 [Kangiella koreensis DSM 16069] Length = 118 Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K AL I+GIG +Q IC + ++ L + ++ +R + Sbjct: 1 MARIAGINIPVHKHADVALTAIYGIGRPRAQKICAAAGVETTAKIKDLNDDQIENLRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR + MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 SK-FTVEGDLRREINMNIKRLMDLGCFRGIRHRRNLPLRGQRTKTNARTRKGPRKPI 116 >gi|126176333|ref|YP_001052482.1| 30S ribosomal protein S13 [Shewanella baltica OS155] gi|152998771|ref|YP_001364452.1| 30S ribosomal protein S13 [Shewanella baltica OS185] gi|160873347|ref|YP_001552663.1| 30S ribosomal protein S13 [Shewanella baltica OS195] gi|217975179|ref|YP_002359930.1| 30S ribosomal protein S13 [Shewanella baltica OS223] gi|304412786|ref|ZP_07394388.1| 30S ribosomal protein S13 [Shewanella baltica OS183] gi|307307450|ref|ZP_07587185.1| 30S ribosomal protein S13 [Shewanella baltica BA175] gi|166231923|sp|A3DA50|RS13_SHEB5 RecName: Full=30S ribosomal protein S13 gi|166231924|sp|A6WHV0|RS13_SHEB8 RecName: Full=30S ribosomal protein S13 gi|189044294|sp|A9KWC3|RS13_SHEB9 RecName: Full=30S ribosomal protein S13 gi|254811164|sp|B8EBI3|RS13_SHEB2 RecName: Full=30S ribosomal protein S13 gi|125999538|gb|ABN63613.1| SSU ribosomal protein S13P [Shewanella baltica OS155] gi|151363389|gb|ABS06389.1| ribosomal protein S13 [Shewanella baltica OS185] gi|160858869|gb|ABX47403.1| ribosomal protein S13 [Shewanella baltica OS195] gi|217500314|gb|ACK48507.1| ribosomal protein S13 [Shewanella baltica OS223] gi|304348866|gb|EFM13282.1| 30S ribosomal protein S13 [Shewanella baltica OS183] gi|306910238|gb|EFN40671.1| 30S ribosomal protein S13 [Shewanella baltica BA175] gi|315265575|gb|ADT92428.1| 30S ribosomal protein S13 [Shewanella baltica OS678] Length = 118 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG ++ IC AI ++ +L E+++ +R+ + Sbjct: 1 MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDILREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|197294606|ref|YP_001799147.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense] gi|226712773|sp|B1VAC3|RS13_PHYAS RecName: Full=30S ribosomal protein S13 gi|171853933|emb|CAM11896.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense] Length = 121 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K SQ I N+L I + RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGKKLSQKILNELNISHDIRVKNLTEQQLSSLRSEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K K + Sbjct: 61 TK-YSVEGDLRREVTLNIKRLMEIGVYRGLRHRKGLPVRGQKTRNNAHTVKGKPKSIAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|58427778|gb|AAW76815.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 134 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 17 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 77 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 132 >gi|283794916|ref|YP_003359269.1| ribosomal protein S13 [Cryptomonas paramecium] gi|253981888|gb|ACT46805.1| ribosomal protein S13 [Cryptomonas paramecium] Length = 125 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P+ KRV AL Y++GIG +SQ I K + P R L + +V I++ I Sbjct: 1 MTRIAGVDLPKNKRVEIALTYMYGIGLSTSQLILAKSNVDPNVRCRDLTDHDVSSIKETI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ Y VEG ++R +++IKRL+++ C RG RH LPVRGQRT TNARTRK K + Sbjct: 61 DKHYLVEGAIKRIESISIKRLIEINCTRGKRHTLNLPVRGQRTRTNARTRKGVKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|304373167|ref|YP_003856376.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1] gi|304309358|gb|ADM21838.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1] Length = 122 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI + IP KR+V AL YI GIG S++I K I R L ES++ IR+ + Sbjct: 1 MARILNIEIPNDKRIVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +DY EGDLRR V +NIKR++++ Y+G+RHR+GLPVRGQ T NARTRK K + + Sbjct: 60 AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRKGPRKTVMGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|313673443|ref|YP_004051554.1| SSU ribosomal protein s13p [Calditerrivibrio nitroreducens DSM 19672] gi|312940199|gb|ADR19391.1| SSU ribosomal protein S13P [Calditerrivibrio nitroreducens DSM 19672] Length = 122 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGV+IP K++ L YI+GIG ++ I ++L + +++ L E E+ IR+ I Sbjct: 1 MARVAGVDIPNNKKLEIGLTYIYGIGRSTANRIIDELNLDRNKKIGDLTEQEISSIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119 +++ +VEGDLR+ +A+NIKRL+++ CYRG RH+ G+PVRGQ+T +NARTR+ GK G+ Sbjct: 61 DENLKVEGDLRKDIALNIKRLIEINCYRGYRHKNGMPVRGQKTRSNARTRRGLAGKRGIK 120 Query: 120 RK 121 RK Sbjct: 121 RK 122 >gi|269469223|gb|EEZ80754.1| ribosomal protein S13 [uncultured SUP05 cluster bacterium] Length = 117 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG ++ IC +L I P + +L E ++ IR A+ Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAKAICAELKIDPATKTAELSEDQLELIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + ++VEGDLRR VAM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK + Sbjct: 61 AK-FEVEGDLRRQVAMDIKRLKDLGCYRGIRHRKSLPLRGQRTKTNARTRKGPRRLI 116 >gi|254495364|ref|ZP_05108288.1| 30S ribosomal protein S13 [Polaribacter sp. MED152] gi|85819718|gb|EAQ40875.1| 30S ribosomal protein S13 [Polaribacter sp. MED152] Length = 121 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG ++ + + + +V + ++ IR+ + Sbjct: 1 MARIAGIDIPKNKRGVIALTYIFGIGNSRAKKVLAEAKVDESIKVQDWTDEQIAAIREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GS-FTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|298491420|ref|YP_003721597.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708] gi|298233338|gb|ADI64474.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708] Length = 126 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L YI+GIG SQ+I + P+ RV L ++++ +R I Sbjct: 1 MARISGVDLPRDKRIEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLNDADIAALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|110004252|emb|CAK98590.1| 30s ribosomal protein s13 [Spiroplasma citri] Length = 121 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 79/122 (64%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV+IP KR V AL YI+GIG SQ I + I + RV L E E+ IR I Sbjct: 1 MARIGGVDIPNDKRAVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ + NART K K + Sbjct: 61 AK-LKIEGDLRREVALNIKRLMEIGSYRGMRHRKSLPARGQSSKQNARTVKGPRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|83814971|ref|YP_445189.1| 30S ribosomal protein S13 [Salinibacter ruber DSM 13855] gi|294507073|ref|YP_003571131.1| 30S ribosomal protein S13 [Salinibacter ruber M8] gi|123529118|sp|Q2S3P2|RS13_SALRD RecName: Full=30S ribosomal protein S13 gi|83756365|gb|ABC44478.1| ribosomal protein S13p/S18e [Salinibacter ruber DSM 13855] gi|294343401|emb|CBH24179.1| 30S ribosomal protein S13 [Salinibacter ruber M8] Length = 127 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 61/120 (50%), Positives = 77/120 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV++P KR AL I+G+G + +I K + ++R + ESE ++R+ I Sbjct: 1 MPRIEGVDVPDDKRGEIALTDIYGVGQSRASEILEKAEVSVDKRPREWTESETKRVRRII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+DY VEG LR V MNIKRL ++GCYRG RHR GLPV GQRT TNARTRK K R Sbjct: 61 EEDYTVEGQLRTEVQMNIKRLKEIGCYRGKRHREGLPVNGQRTRTNARTRKGKRKTVAGR 120 >gi|77361713|ref|YP_341288.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis TAC125] gi|119472061|ref|ZP_01614319.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7] gi|91207718|sp|Q3IJK6|RS13_PSEHT RecName: Full=30S ribosomal protein S13 gi|76876624|emb|CAI87846.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas haloplanktis TAC125] gi|119445196|gb|EAW26488.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7] Length = 118 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILAATGIAETTKIGELSDETLDVLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|313683418|ref|YP_004061156.1| SSU ribosomal protein s13p [Sulfuricurvum kujiense DSM 16994] gi|313156278|gb|ADR34956.1| SSU ribosomal protein S13P [Sulfuricurvum kujiense DSM 16994] Length = 123 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 64/123 (52%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG +S+ I + + +RV +L E E I + I Sbjct: 1 MARIAGVDLPKKKRLEYALTYIYGIGLHTSRKILDATGLDYNKRVFELSEDEAATIAKEI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK K + Sbjct: 61 RSSGIAVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKKTVGS 120 Query: 120 RKR 122 + Sbjct: 121 ATK 123 >gi|224417908|ref|ZP_03655914.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|242309342|ref|ZP_04808497.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489] gi|253827247|ref|ZP_04870132.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|313141449|ref|ZP_07803642.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|239523913|gb|EEQ63779.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489] gi|253510653|gb|EES89312.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] gi|313130480|gb|EFR48097.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491] Length = 122 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KR+ AL YI+GIG K+S+DI N + I ++RV L E EV I + I Sbjct: 1 MARIAGVDLPKKKRIEYALTYIYGIGLKASRDILNAVNISYDKRVQDLGEDEVSAIAKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T NARTRK K + Sbjct: 61 QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|325479172|gb|EGC82269.1| 30S ribosomal protein S13 [Anaerococcus prevotii ACS-065-V-Col13] Length = 114 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y +EGDLRR V+MNI+ L ++G YRGLRH+ LPVRGQ T NA+TRK Sbjct: 61 -NNYNIEGDLRREVSMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNAKTRKG 111 >gi|145219085|ref|YP_001129794.1| 30S ribosomal protein S13 [Prosthecochloris vibrioformis DSM 265] gi|189044287|sp|A4SCT3|RS13_PROVI RecName: Full=30S ribosomal protein S13 gi|145205249|gb|ABP36292.1| SSU ribosomal protein S13P [Chlorobium phaeovibrioides DSM 265] Length = 125 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 60/120 (50%), Positives = 82/120 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG +++ I + I P+R++ L ++E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTTAKTILQRTGIAPDRKISDLNDAEAHSIRELIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +Y+VEG R ++IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK K +K+ Sbjct: 62 EYKVEGQARGEQQLSIKRLMDVGCYRGLRHRRSLPVRGQNTQTNARTRKGKRKTVAGKKK 121 >gi|51473817|ref|YP_067574.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington] gi|81390000|sp|Q68WA0|RS13_RICTY RecName: Full=30S ribosomal protein S13 gi|51460129|gb|AAU04092.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington] Length = 125 Score = 160 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA VNIP KR+V +L YI+G+G + +ICNK I +++V L + E+I++R I Sbjct: 1 MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISRDKKVKVLTDQELIRLRNII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR V +NIK+ D+ CY+GLRH R LPVRGQ TH+NARTRK + Sbjct: 61 ENEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|312795800|ref|YP_004028722.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454] gi|312167575|emb|CBW74578.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454] Length = 121 Score = 160 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V L I GIG ++ IC + ++V +L ++++ ++R + Sbjct: 1 MARIAGVNIPVHKHTVIGLQAILGIGASRARLICVAAGVDTSKKVKELTDADLEKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR V MNIKR MD+GCY G+RHR+GLP+RGQRT TNARTRK + A Sbjct: 61 AK-FVVEGDLRREVTMNIKRKMDIGCYEGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|294055199|ref|YP_003548857.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221] gi|293614532|gb|ADE54687.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221] Length = 120 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L Y++GIG ++ I + P+RR L E E+ Q+ + Sbjct: 1 MPRILGVDIPANKKLEYSLRYVYGIGPTRAKTIVAEAGFDPDRRAGDLSEEELNQLATIV 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ Y VEGDLRR + N+KRL+ + +RG+RH RGLPVRGQRT TNARTRK K Sbjct: 61 ADKQYVVEGDLRREITANLKRLIAVRSWRGMRHARGLPVRGQRTKTNARTRKGGVKPI 118 >gi|320540704|ref|ZP_08040322.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson] gi|320029234|gb|EFW11295.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson] Length = 107 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 1/108 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I GIG SQ IC I ++ +L E ++ Q+R+A+ Sbjct: 1 MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNAR Sbjct: 61 AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNAR 107 >gi|319787904|ref|YP_004147379.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1] gi|317466416|gb|ADV28148.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1] Length = 118 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 64/117 (54%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPTHKHVWVGLQSIYGIGRTRSKKVCEAANVATTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YIVEGDLRREVGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|88803727|ref|ZP_01119251.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P] gi|88780460|gb|EAR11641.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P] Length = 121 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP+ KR V AL YI GIG ++ + + + +V + + ++ IR+ + Sbjct: 1 MARIAGIDIPKNKRGVIALTYIFGIGSSRAKKVLAEAKVDESIKVQEWTDDQIAAIREQV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +EG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 GS-FTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|300114714|ref|YP_003761289.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113] gi|299540651|gb|ADJ28968.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113] Length = 118 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG ++ IC + +P +++V L ++E+ +R + Sbjct: 1 MARIAGINIPVHKHTVIALSSIYGIGLSRARKICKAVGVPSDKKVRDLSDNELEGLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y VEGDLRR ++M+IKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK + Sbjct: 61 AK-YPVEGDLRRGISMDIKRLMDLGCYRGHRHRRGLPVRGQRTQTNARTRKGPRR 114 >gi|325921502|ref|ZP_08183357.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865] gi|325548049|gb|EGD19048.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865] Length = 123 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 6 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 65 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 66 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 121 >gi|303270835|ref|XP_003054779.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla CCMP1545] gi|226462753|gb|EEH60031.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla CCMP1545] Length = 182 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 80/121 (66%), Gaps = 1/121 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP KR AL YI+G+G +++ + + +R+ + E E+ ++R+A++ Sbjct: 63 ARVAGVEIPNNKRAETALTYIYGVGDTTAKKVMATTGL-ENKRMREFEEDELTRLREAVD 121 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + +EGDLRR +MNIKRL ++ CYRG RH +GLP RGQR+ TNARTRK K +K Sbjct: 122 ELPLIEGDLRRFNSMNIKRLKEIQCYRGKRHIQGLPCRGQRSKTNARTRKGKVKTVAGKK 181 Query: 122 R 122 + Sbjct: 182 K 182 >gi|190572965|ref|YP_001970810.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a] gi|254521260|ref|ZP_05133315.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14] gi|226712790|sp|B2FQK5|RS13_STRMK RecName: Full=30S ribosomal protein S13 gi|190010887|emb|CAQ44496.1| putative 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a] gi|219718851|gb|EED37376.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14] Length = 118 Score = 160 bits (405), Expect = 7e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|119502945|ref|ZP_01625030.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080] gi|119461291|gb|EAW42381.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080] Length = 118 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AGVNIP K + +L YI+G+G ++ + + I + +V +L E E+ Q+R + Sbjct: 1 MARLAGVNIPDNKHALVSLTYIYGVGRTQARRLLDATGISYQTKVGELSEGELDQLRGLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK K Sbjct: 61 -NELTVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRKGPRKPI 116 >gi|307154820|ref|YP_003890204.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822] gi|306985048|gb|ADN16929.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822] Length = 127 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG SQ+I + + P+ RV L + + +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSQEILAETGVNPDTRVKDLSDEDTAALRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDLRR +MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+ + Sbjct: 61 ETNYQIEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|227501158|ref|ZP_03931207.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098] gi|227216743|gb|EEI82144.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098] Length = 114 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+GIG +S +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGIGRSTSNEILKNAGINPDTKMKDLTEEELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y +EGDLRR ++MNI+ L ++G YRGLRH+ LPVRGQ T NARTRK Sbjct: 61 -NNYHIEGDLRRDISMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNARTRKG 111 >gi|54778766|gb|AAV39600.1| ribosomal protein S13 [synthetic construct] Length = 145 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+NIP K V AL I+G+G S+ I I + ++ +L E ++ +R + Sbjct: 26 ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 85 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 86 K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 140 >gi|126662241|ref|ZP_01733240.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38] gi|126625620|gb|EAZ96309.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38] Length = 124 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR + AL YI GIG ++DI K + +++V + E+ IR A+ Sbjct: 1 MARIAGVDIPKQKRGIIALTYIFGIGKSRAKDILAKAQVSEDKKVQDWNDDEIGAIRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++EG+LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 S-YFKIEGELRSEIQLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|21241758|ref|NP_641340.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str. 306] gi|66769621|ref|YP_244383.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. 8004] gi|78046576|ref|YP_362751.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84625023|ref|YP_452395.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879273|ref|YP_202200.6| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331] gi|166710853|ref|ZP_02242060.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575511|ref|YP_001912440.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188992833|ref|YP_001904843.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. B100] gi|289665158|ref|ZP_06486739.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669365|ref|ZP_06490440.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. musacearum NCPPB4381] gi|294627859|ref|ZP_06706438.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664164|ref|ZP_06729550.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325925366|ref|ZP_08186768.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118] gi|32363342|sp|Q8NKX3|RS13_XANAC RecName: Full=30S ribosomal protein S13 gi|81304424|sp|Q4URG0|RS13_XANC8 RecName: Full=30S ribosomal protein S13 gi|91207633|sp|Q3BWW2|RS13_XANC5 RecName: Full=30S ribosomal protein S13 gi|91207634|sp|Q5GWV6|RS13_XANOR RecName: Full=30S ribosomal protein S13 gi|123521159|sp|Q2P006|RS13_XANOM RecName: Full=30S ribosomal protein S13 gi|226712804|sp|B0RU61|RS13_XANCB RecName: Full=30S ribosomal protein S13 gi|226712805|sp|B2SQT1|RS13_XANOP RecName: Full=30S ribosomal protein S13 gi|18378766|gb|AAD00322.2| ribosomal protein S13 [Xanthomonas campestris pv. campestris] gi|21107130|gb|AAM35876.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str. 306] gi|66574953|gb|AAY50363.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. 8004] gi|78035006|emb|CAJ22651.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|84368963|dbj|BAE70121.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|167734593|emb|CAP52803.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris] gi|188519963|gb|ACD57908.1| ribosomal protein S13p/S18e [Xanthomonas oryzae pv. oryzae PXO99A] gi|292597773|gb|EFF41931.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292606067|gb|EFF49332.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544244|gb|EGD15625.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118] Length = 118 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|269128488|ref|YP_003301858.1| 30S ribosomal protein S13 [Thermomonospora curvata DSM 43183] gi|268313446|gb|ACY99820.1| ribosomal protein S13 [Thermomonospora curvata DSM 43183] Length = 126 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 59/110 (53%), Positives = 83/110 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + + + + RVHQL + E++++R I Sbjct: 1 MARLVGVDLPRDKRIEVALTYIYGIGRTRALETLRQTGVNGDLRVHQLGDEELVKLRDWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y+VEGDLRR V +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR Sbjct: 61 EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110 >gi|297621701|ref|YP_003709838.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044] gi|297377002|gb|ADI38832.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044] Length = 122 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 57/110 (51%), Positives = 76/110 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G +IP KR++ +L YI+GIG +++I KL + P R L E ++ +I + Sbjct: 1 MPRVIGTDIPDNKRLIISLTYIYGIGPFKAKEIIEKLQLDPNMRARGLTEDDIAKINTLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + DY VEGDLRR V NIKRL+ + CYRG+RHR GLPVRGQRT +NARTR Sbjct: 61 QNDYIVEGDLRRQVQNNIKRLISINCYRGIRHRSGLPVRGQRTQSNARTR 110 >gi|172038950|ref|YP_001805451.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142] gi|254811144|sp|B1WQT3|RS13_CYAA5 RecName: Full=30S ribosomal protein S13 gi|171700404|gb|ACB53385.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142] Length = 127 Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SQ+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILAETGVNPDTRVRDLSDEDVAKLRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|196228477|ref|ZP_03127344.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428] gi|196227880|gb|EDY22383.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428] Length = 128 Score = 159 bits (404), Expect = 9e-38, Method: Composition-based stats. Identities = 61/124 (49%), Positives = 78/124 (62%), Gaps = 2/124 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV IP KR+ +L YI+GIG +++ I + I P+ R L ++ QI QAI Sbjct: 1 MPRLLGVEIPGDKRIEASLPYIYGIGPSTAKRILEQANINPDVRAKDLSNEQLNQIIQAI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GV 118 +EGDLRR + N+KRL + CYRG+RHRR LPVRGQRT TNARTRK K GV Sbjct: 61 TASKLPIEGDLRRELQSNLKRLQAINCYRGIRHRRSLPVRGQRTSTNARTRKGPRKTVGV 120 Query: 119 ARKR 122 R + Sbjct: 121 QRAK 124 >gi|218440645|ref|YP_002378974.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7424] gi|226712726|sp|B7KI09|RS13_CYAP7 RecName: Full=30S ribosomal protein S13 gi|218173373|gb|ACK72106.1| ribosomal protein S13 [Cyanothece sp. PCC 7424] Length = 127 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG S++I + P+ RV L + + + +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSKEILANTGVNPDTRVKDLSDEDALALRSYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDLRR MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+ + Sbjct: 61 EANYQIEGDLRRWETMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|194364555|ref|YP_002027165.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia R551-3] gi|226712789|sp|B4SLH2|RS13_STRM5 RecName: Full=30S ribosomal protein S13 gi|194347359|gb|ACF50482.1| ribosomal protein S13 [Stenotrophomonas maltophilia R551-3] Length = 118 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|17231685|ref|NP_488233.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120] gi|32363371|sp|Q8YPK1|RS13_ANASP RecName: Full=30S ribosomal protein S13 gi|17133328|dbj|BAB75892.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120] Length = 126 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ+I + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEIIAATGVNPDTRVKDLSDADVAALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|218245118|ref|YP_002370489.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8801] gi|257058143|ref|YP_003136031.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8802] gi|226712727|sp|B7K226|RS13_CYAP8 RecName: Full=30S ribosomal protein S13 gi|218165596|gb|ACK64333.1| ribosomal protein S13 [Cyanothece sp. PCC 8801] gi|256588309|gb|ACU99195.1| ribosomal protein S13 [Cyanothece sp. PCC 8802] Length = 127 Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 84/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L Y+ GIG SQ+I + + P+ RV L + EV +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYLFGIGLSRSQEILAETGVNPDTRVRDLTDEEVANLRAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQRT TNARTR+ + Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRVTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|297625815|ref|YP_003687578.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921580|emb|CBL56134.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 124 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 56/112 (50%), Positives = 80/112 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG + I I P+ RV + +++++++R I Sbjct: 1 MARLQGVDLPREKRLEVALTYIFGIGKTRADAILEATGISPDIRVKDVTDAQLVELRDFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + +Y+VEGDLRR+V +I+R +++G Y+G RHR GLPVRGQRT TNARTRK Sbjct: 61 DANYEVEGDLRRSVDADIRRKIEIGTYQGRRHRAGLPVRGQRTRTNARTRKG 112 >gi|166367997|ref|YP_001660270.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843] gi|189044281|sp|B0JY40|RS13_MICAN RecName: Full=30S ribosomal protein S13 gi|159027083|emb|CAO89268.1| rpsM [Microcystis aeruginosa PCC 7806] gi|166090370|dbj|BAG05078.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843] Length = 127 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++G+G SQ++ + + P+ RV L + +V +R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDLRR AMNIKRL D+G YRG RHR GLPVRGQRT TNARTR+ + Sbjct: 61 ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQRTRTNARTRRGRRVTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|153871950|ref|ZP_02000983.1| Ribosomal protein S13 [Beggiatoa sp. PS] gi|152071586|gb|EDN69019.1| Ribosomal protein S13 [Beggiatoa sp. PS] Length = 118 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+ K + L I+GIG K ++ IC +I P ++ L + + +R + Sbjct: 1 MARIAGINLSGHKHTIIGLTSIYGIGRKLAEKICEATSIDPSMKIKDLSDKNLETLRHEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR VAMNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK + Sbjct: 61 AK-YDVEGDLRREVAMNIKRLMDLGCYRGMRHRRGLPLRGQRTRTNARTRKGPRRPI 116 >gi|46446065|ref|YP_007430.1| 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila UWE25] gi|81627551|sp|Q6ME44|RS13_PARUW RecName: Full=30S ribosomal protein S13 gi|46399706|emb|CAF23155.1| probable 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila UWE25] Length = 122 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G++IP KR+ +L Y++GIG S +I KL + P R H+L + ++ ++ + Sbjct: 1 MPRVIGIDIPDNKRLEISLTYLYGIGRHLSNEIIVKLGLDPNMRAHKLTQDDLARLNGLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y VEGDLRR V NIKRL+ + YRG+RHR GLPVRGQRT TN+RTRK K + Sbjct: 61 TSEYMVEGDLRRQVQNNIKRLISIHSYRGMRHRLGLPVRGQRTKTNSRTRKGRRKTVANK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|51245001|ref|YP_064885.1| 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54] gi|81642539|sp|Q6AP46|RS13_DESPS RecName: Full=30S ribosomal protein S13 gi|50876038|emb|CAG35878.1| probable 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54] Length = 121 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 67/121 (55%), Positives = 83/121 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ K + RAL YIHGIG S++ I + + +P L V +IR+ I Sbjct: 1 MARIAGIDLPKNKHIDRALTYIHGIGLTSARKILDAVELPYTMNSDDLDGETVNRIRKVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY VEGD RR V+M+IKRL DLGCYRG RHR GLP RGQ+T TNARTRK +G R Sbjct: 61 EADYTVEGDRRREVSMDIKRLTDLGCYRGRRHRMGLPCRGQKTKTNARTRKGPRRGAARR 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|117927540|ref|YP_872091.1| 30S ribosomal protein S13 [Acidothermus cellulolyticus 11B] gi|158706209|sp|A0LRP5|RS13_ACIC1 RecName: Full=30S ribosomal protein S13 gi|117648003|gb|ABK52105.1| SSU ribosomal protein S13P [Acidothermus cellulolyticus 11B] Length = 126 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I P+ RV L + +++++R+ I Sbjct: 1 MARLVGVDLPRDKRLEVALTYIYGIGRTRALETLAATGISPDLRVRDLTDDDLLKLREWI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRTHTNARTRK K + Sbjct: 61 EANYRVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTHTNARTRKGPRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] gi|282855173|ref|ZP_06264505.1| 30S ribosomal protein S13 [Propionibacterium acnes J139] gi|289424822|ref|ZP_06426604.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187] gi|289427645|ref|ZP_06429357.1| 30S ribosomal protein S13 [Propionibacterium acnes J165] gi|295131355|ref|YP_003582018.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137] gi|81611215|sp|Q6A6Q8|RS13_PROAC RecName: Full=30S ribosomal protein S13 gi|50840888|gb|AAT83555.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202] gi|282581761|gb|EFB87146.1| 30S ribosomal protein S13 [Propionibacterium acnes J139] gi|289154785|gb|EFD03468.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187] gi|289159136|gb|EFD07328.1| 30S ribosomal protein S13 [Propionibacterium acnes J165] gi|291376040|gb|ADD99894.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137] gi|313763206|gb|EFS34570.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA1] gi|313773121|gb|EFS39087.1| 30S ribosomal protein S13 [Propionibacterium acnes HL074PA1] gi|313793289|gb|EFS41347.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA1] gi|313801067|gb|EFS42335.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA2] gi|313808808|gb|EFS47262.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA2] gi|313810398|gb|EFS48112.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA1] gi|313812266|gb|EFS49980.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA1] gi|313816543|gb|EFS54257.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA1] gi|313817987|gb|EFS55701.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA2] gi|313819900|gb|EFS57614.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA1] gi|313823391|gb|EFS61105.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA2] gi|313824862|gb|EFS62576.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA1] gi|313828396|gb|EFS66110.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA2] gi|313830104|gb|EFS67818.1| 30S ribosomal protein S13 [Propionibacterium acnes HL007PA1] gi|313832624|gb|EFS70338.1| 30S ribosomal protein S13 [Propionibacterium acnes HL056PA1] gi|313837980|gb|EFS75694.1| 30S ribosomal protein S13 [Propionibacterium acnes HL086PA1] gi|314914363|gb|EFS78194.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA4] gi|314917683|gb|EFS81514.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA1] gi|314919585|gb|EFS83416.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA3] gi|314924150|gb|EFS87981.1| 30S ribosomal protein S13 [Propionibacterium acnes HL001PA1] gi|314925757|gb|EFS89588.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA3] gi|314930175|gb|EFS94006.1| 30S ribosomal protein S13 [Propionibacterium acnes HL067PA1] gi|314957152|gb|EFT01256.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA1] gi|314957793|gb|EFT01896.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA1] gi|314960837|gb|EFT04938.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA2] gi|314963511|gb|EFT07611.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA1] gi|314964879|gb|EFT08978.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA2] gi|314969906|gb|EFT14004.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA1] gi|314973047|gb|EFT17143.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA1] gi|314975543|gb|EFT19638.1| 30S ribosomal protein S13 [Propionibacterium acnes HL045PA1] gi|314979768|gb|EFT23862.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA2] gi|314982285|gb|EFT26378.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA3] gi|314984826|gb|EFT28918.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA1] gi|314986085|gb|EFT30177.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA2] gi|314988700|gb|EFT32791.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA3] gi|315077132|gb|EFT49199.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA2] gi|315079819|gb|EFT51795.1| 30S ribosomal protein S13 [Propionibacterium acnes HL078PA1] gi|315083186|gb|EFT55162.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA2] gi|315086860|gb|EFT58836.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA3] gi|315089952|gb|EFT61928.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA1] gi|315090474|gb|EFT62450.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA4] gi|315093707|gb|EFT65683.1| 30S ribosomal protein S13 [Propionibacterium acnes HL060PA1] gi|315096726|gb|EFT68702.1| 30S ribosomal protein S13 [Propionibacterium acnes HL038PA1] gi|315097954|gb|EFT69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA2] gi|315100597|gb|EFT72573.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA1] gi|315103999|gb|EFT75975.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA2] gi|315106040|gb|EFT78016.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA1] gi|315109200|gb|EFT81176.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA2] gi|327325140|gb|EGE66946.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA3] gi|327325231|gb|EGE67036.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA2] gi|327325527|gb|EGE67326.1| 30S ribosomal protein S13 [Propionibacterium acnes HL103PA1] gi|327332740|gb|EGE74474.1| 30S ribosomal protein S13 [Propionibacterium acnes HL097PA1] gi|327444031|gb|EGE90685.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA1] gi|327449341|gb|EGE95995.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA2] gi|327449431|gb|EGE96085.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA2] gi|327451453|gb|EGE98107.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA3] gi|327451572|gb|EGE98226.1| 30S ribosomal protein S13 [Propionibacterium acnes HL092PA1] gi|327451859|gb|EGE98513.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA2] gi|328752073|gb|EGF65689.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA1] gi|328755529|gb|EGF69145.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA2] gi|328756314|gb|EGF69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL020PA1] gi|328761352|gb|EGF74879.1| 30S ribosomal protein S13 [Propionibacterium acnes HL099PA1] Length = 123 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/110 (51%), Positives = 78/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I + RVH+L + +++ +R I Sbjct: 1 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E +Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR Sbjct: 61 EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110 >gi|88861472|ref|ZP_01136098.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2] gi|88816520|gb|EAR26349.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2] Length = 118 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V AL I+G+G S+ I I ++ +L + + +R+ + Sbjct: 1 MARIAGINVPDHKHAVIALTAIYGVGKTRSKAILAATGIAETTKIGELNDETLDVLREEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 LK-YTVEGDLRREITLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKAI 116 >gi|325955020|ref|YP_004238680.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922] gi|323437638|gb|ADX68102.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922] Length = 125 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 79/112 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++P+ KR V L YI+G+G ++ I + I +++V + + E+ IR +I Sbjct: 1 MARISGVDLPKNKRGVIGLTYIYGVGKSTASRILAENNISEDKKVSEWTDDEINAIRNSI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + +VEG+LR V +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK Sbjct: 61 NEGIKVEGELRSEVQLNIKRLMDIGCTRGIRHRLGLPLRGQRTKNNSRTRKG 112 >gi|332037271|gb|EGI73726.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis ANT/505] Length = 118 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDEILDVLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|254422356|ref|ZP_05036074.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335] gi|196189845|gb|EDX84809.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335] Length = 126 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+G+G SQ+I K + P RV L +++VI++R+ + Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGVGLSRSQEILEKTGVDPNIRVKDLADADVIKLRETV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DY +EGDLRR V MNIKRLMD+GCYRG RHR GLPVRGQRT TN+RTR+ + + Sbjct: 61 EGDYLIEGDLRRQVNMNIKRLMDIGCYRGRRHRMGLPVRGQRTRTNSRTRRSGKRTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|285017341|ref|YP_003375052.1| 30s ribosomal protein s13 [Xanthomonas albilineans GPE PC73] gi|283472559|emb|CBA15064.1| probable 30s ribosomal protein s13 [Xanthomonas albilineans] Length = 118 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEAAGVTSTTKIRDLSEPEIERLRLEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|159485052|ref|XP_001700563.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii] gi|158272203|gb|EDO98007.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii] Length = 164 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ V IP +KR+ +L YI GIG ++Q I + ++ ++L E E+ ++R +E+ Sbjct: 44 RVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV-ENKKTYELNEEEINKLRSEVEK 102 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y E DLRR VA NIKRL D+GCYRG RH GLPVRGQRT TNARTRK K +K+ Sbjct: 103 -YTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 161 >gi|209527120|ref|ZP_03275634.1| ribosomal protein S13 [Arthrospira maxima CS-328] gi|209492460|gb|EDZ92801.1| ribosomal protein S13 [Arthrospira maxima CS-328] Length = 127 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLTDADVAALRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +YQVEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|94676656|ref|YP_588798.1| 30S ribosomal protein S13 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|158706338|sp|Q1LTB6|RS13_BAUCH RecName: Full=30S ribosomal protein S13 gi|94219806|gb|ABF13965.1| ribosomal protein S13p [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 118 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG K SQ ICN IP ++ L E+++ +R I Sbjct: 1 MARIAGINIPDHKHTVIALTSIYGIGIKRSQYICNATGIPQNTKLSTLSETQIDTLRDVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Q + +EGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 TQ-FTIEGDLRREVTLNIKRLIDLGTYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116 >gi|160871560|ref|ZP_02061692.1| ribosomal protein S13p/S18e [Rickettsiella grylli] gi|159120359|gb|EDP45697.1| ribosomal protein S13p/S18e [Rickettsiella grylli] Length = 119 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 71/117 (60%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K VV L I+G+G + IC L I PE +V L+E ++ IRQ I Sbjct: 1 MARIAGVNIPINKHVVIGLTAIYGVGRSRALKICKGLNISPETKVKDLLEKQLDAIRQKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Y++EGDLRR V+++IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK K Sbjct: 61 IT-YKIEGDLRREVSISIKRLMDLGCYRGIRHRRGLPVRGQRTRTNARTRKGPRKMI 116 >gi|186684488|ref|YP_001867684.1| 30S ribosomal protein S13 [Nostoc punctiforme PCC 73102] gi|226712769|sp|B2ITN3|RS13_NOSP7 RecName: Full=30S ribosomal protein S13 gi|186466940|gb|ACC82741.1| ribosomal protein S13 [Nostoc punctiforme PCC 73102] Length = 126 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG +Q+I + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRAQEIIAATGVNPDTRVKDLSDADVTALRGEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR ++NIKRL+D+G YRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ESNYQVEGDLRRLESLNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|284053324|ref|ZP_06383534.1| 30S ribosomal protein S13 [Arthrospira platensis str. Paraca] gi|291567806|dbj|BAI90078.1| 30S ribosomal protein S13 [Arthrospira platensis NIES-39] Length = 127 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L +++V +R I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLSDADVAALRSVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +YQVEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|315127934|ref|YP_004069937.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913] gi|315016448|gb|ADT69786.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913] Length = 118 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+N+P K V L I+GIG S+ I I ++ +L + + +R+A+ Sbjct: 1 MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDETLDVLREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-YTVEGDLRREVTLNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|325916508|ref|ZP_08178777.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937] gi|325537297|gb|EGD09024.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937] Length = 134 Score = 158 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 17 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 77 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 132 >gi|193216737|ref|YP_001999979.1| 30S ribosomal protein S13 [Mycoplasma arthritidis 158L3-1] gi|226712764|sp|B3PMM3|RS13_MYCA5 RecName: Full=30S ribosomal protein S13 gi|193002060|gb|ACF07275.1| ribosomal protein S13 [Mycoplasma arthritidis 158L3-1] Length = 122 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ V IP KR V +L YI GIG + I + ++V L E E+ +IR+ Sbjct: 1 MARVLNVEIPNKKRAVISLTYIFGIGKTLASQILKDANVDENKKVESLSEEELTRIREE- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKKYVTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQCTQKNARTRKGPRKTIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|37912967|gb|AAR05299.1| ribosomal protein S13 [uncultured marine gamma proteobacterium EB000-45B06] gi|40063198|gb|AAR38035.1| ribosomal protein S13 [uncultured marine bacterium 562] Length = 119 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 68/116 (58%), Positives = 81/116 (69%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L +I GIG K++QDIC +L I R++ L E EV +R AI Sbjct: 1 MARIAGVNIPENKHVEISLTHIFGIGRKTAQDICKELKIDYTRKISDLTEDEVENLRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + + VEGDLRR ++ NIKRLMDLG YRG+RHRR LP RGQ T NARTRK K Sbjct: 61 GK-FVVEGDLRRNISTNIKRLMDLGSYRGIRHRRKLPTRGQNTKNNARTRKGAKKP 115 >gi|119484811|ref|ZP_01619293.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106] gi|119457629|gb|EAW38753.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106] Length = 127 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I + + P+ RV L ++EV +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILKETGVNPDTRVKDLSDAEVAALRTLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + YQVEGDLRR AMNIKRLMD+G YRG RHR GLPVRGQRT TNARTR+ + R Sbjct: 61 QGQYQVEGDLRRWEAMNIKRLMDIGTYRGRRHRMGLPVRGQRTRTNARTRRGARRTVAGR 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300867113|ref|ZP_07111779.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506] gi|300334868|emb|CBN56945.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506] Length = 127 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 67/122 (54%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S +I + + P+ RV L +++V +R + Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSHEILSATGVNPDTRVKDLSDADVTALRGEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQVEGDLRR +MNIKRLMD+G YRG RHR GLPVRGQRT TNARTR+ + + Sbjct: 61 ETNYQVEGDLRRLESMNIKRLMDIGTYRGRRHRLGLPVRGQRTRTNARTRRGVRRTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|282899973|ref|ZP_06307934.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505] gi|281195243|gb|EFA70179.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505] Length = 145 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 69/121 (57%), Positives = 87/121 (71%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGV++PR KRV L YI+GIG + SQDI + P+ RV L ++++ +R IE Sbjct: 21 ARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEIE 80 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 +YQVEGDLRR AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+ + +K Sbjct: 81 SNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGKK 140 Query: 122 R 122 + Sbjct: 141 K 141 >gi|126658011|ref|ZP_01729163.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110] gi|126620649|gb|EAZ91366.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110] Length = 127 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG SQ+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILEETGVNPDTRVRDLSDEDVAKLRACI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQRT TN RTR+ + Sbjct: 61 ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNGRTRRGRRVTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|51209924|ref|YP_063588.1| ribosomal protein S13 [Gracilaria tenuistipitata var. liui] gi|68053118|sp|Q6B8X2|RR13_GRATL RecName: Full=30S ribosomal protein S13, chloroplastic gi|50657678|gb|AAT79663.1| 30S ribosomal protein S13 [Gracilaria tenuistipitata var. liui] Length = 126 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 54/122 (44%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV++P+ KR+ +L YI+GIG + +I +L I + +L + +++ IRQ + Sbjct: 1 MTRIVGVDLPKNKRIEISLTYIYGIGKSKAIEILEQLKINRNIKTKELKDEQIVLIRQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 YQ+EGDL+R +MNIKRLM + YRG RH+ GLP+RGQ T TNART++ K + Sbjct: 61 NNSYQIEGDLKRVESMNIKRLMTISSYRGKRHQLGLPLRGQNTRTNARTKRGIKKTMAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|269115049|ref|YP_003302812.1| 30S ribosomal protein S13 [Mycoplasma hominis] gi|268322674|emb|CAX37409.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114] Length = 122 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ + IP K+V +L YI GIG +++I + E+RV L E E+ +IR Sbjct: 1 MARVLNIEIPNNKKVRISLTYIFGIGVSLAKEILKDANVDGEKRVKDLSEEELTRIRDE- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y EGDLRR + +NIKRLM++ YRG+RHR+GLPVRGQ T NARTRK K + Sbjct: 60 AKKYTTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQSTKKNARTRKGPRKTIAGK 119 Query: 121 K 121 K Sbjct: 120 K 120 >gi|113476557|ref|YP_722618.1| 30S ribosomal protein S13 [Trichodesmium erythraeum IMS101] gi|123056506|sp|Q110C9|RS13_TRIEI RecName: Full=30S ribosomal protein S13 gi|110167605|gb|ABG52145.1| SSU ribosomal protein S13P [Trichodesmium erythraeum IMS101] Length = 127 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 57/101 (56%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SQ+I + + P+ RV L +++V IR + Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGLSRSQEILAETDVNPDTRVKDLSDADVAAIRSEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + +Y+VEGDLRR AM+IKRLMD+G YRG RHR GLPVRGQ Sbjct: 61 QNNYEVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101 >gi|15612281|ref|NP_223934.1| 30S ribosomal protein S13 [Helicobacter pylori J99] gi|7388139|sp|Q9ZJT2|RS13_HELPJ RecName: Full=30S ribosomal protein S13 gi|4155844|gb|AAD06818.1| 30S RIBOSOMAL PROTEIN S13 [Helicobacter pylori J99] Length = 120 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 68/120 (56%), Positives = 86/120 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL +GIG KSS++I + I ++RVH+L E EV I + I Sbjct: 1 MARIAGVDLPKKKRVEYALTCKNGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T NARTRK K ++ Sbjct: 61 QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120 >gi|91200690|emb|CAJ73741.1| strongly similar to 30S ribosomal protein S13 [Candidatus Kuenenia stuttgartiensis] Length = 127 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 60/121 (49%), Positives = 73/121 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +IP KR+V AL Y +GIG S+ I +L I R L E ++ + I Sbjct: 1 MPRIAGTDIPADKRIVVALTYFYGIGGALSKKILRELNIDENVRTKDLHEDQLSILGAHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++Y VEG LRR NI RL + CYRG+RHR GLPVRGQRT TNARTRK K + Sbjct: 61 GKNYNVEGQLRRQELQNISRLRSISCYRGMRHRIGLPVRGQRTKTNARTRKGRKKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|71278025|ref|YP_267373.1| 30S ribosomal protein S13 [Colwellia psychrerythraea 34H] gi|91207696|sp|Q488Z1|RS13_COLP3 RecName: Full=30S ribosomal protein S13 gi|71143765|gb|AAZ24238.1| ribosomal protein S13 [Colwellia psychrerythraea 34H] Length = 118 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I+GIG ++ IC I ++ +L E+++ +R + Sbjct: 1 MARIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAESTKISELDEAKIDLLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ + VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 DK-FTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|189485109|ref|YP_001956050.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|226712801|sp|B1GZA7|RS13_UNCTG RecName: Full=30S ribosomal protein S13 gi|170287068|dbj|BAG13589.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 130 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 65/121 (53%), Positives = 84/121 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+AG+++P KR+ AL YI+GIG S +I +L++ P +RV L E EV +I I Sbjct: 1 MARVAGIDLPNNKRLDIALRYIYGIGPAISDEIIKELSLNPAKRVKDLTEEEVGRINNLI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VEGDLRR V NIKRL+++ YRGLRHRR LPVRGQRT TNARTR+ K A Sbjct: 61 TKNLKVEGDLRREVQSNIKRLIEIRSYRGLRHRRNLPVRGQRTKTNARTRRGKRKTVGAG 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|110598110|ref|ZP_01386388.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031] gi|110340242|gb|EAT58739.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031] Length = 125 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 79/117 (67%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I P+R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRVSAENILQRAGIAPDRKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 Y+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 62 SYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTSTNARTRKGKRKTVAG 118 >gi|67923560|ref|ZP_00517033.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501] gi|67854586|gb|EAM49872.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501] Length = 127 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KRV L Y++GIG +Q+I + + P+ RV L + +V ++R I Sbjct: 1 MARISGVDLPRDKRVEIGLTYLYGIGLSRAQEILAETGVNPDTRVRDLSDEDVAKLRGCI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E++YQ+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQRT TN RTR+ + Sbjct: 61 EENYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNGRTRRGRKVTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|56751895|ref|YP_172596.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|81301020|ref|YP_401228.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 7942] gi|3122786|sp|O24708|RS13_SYNP6 RecName: Full=30S ribosomal protein S13 gi|123556372|sp|Q31L28|RS13_SYNE7 RecName: Full=30S ribosomal protein S13 gi|2446911|dbj|BAA22470.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|56686854|dbj|BAD80076.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301] gi|81169901|gb|ABB58241.1| SSU ribosomal protein S13P [Synechococcus elongatus PCC 7942] Length = 125 Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR L YI+GIG +++I K + P+ R+ L +SEV +RQ + Sbjct: 1 MARIAGVDLPRDKRAEIGLTYIYGIGPTRAKEILAKTGVSPDTRIKDLNDSEVAALRQVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DYQVEGDLRR AM+IKRLMD+G RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 61 ENDYQVEGDLRRLEAMSIKRLMDIGTVRGRRHRAGLPVRGQRTRTNARTRRGARKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|45644718|gb|AAS73106.1| predicted ribosomal protein S13 [uncultured marine gamma proteobacterium EBAC20E09] Length = 118 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 65/116 (56%), Positives = 78/116 (67%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVNIP K V +L +I GIG K++Q+IC L I +++ L E E+ IR AI Sbjct: 1 MARIAGVNIPENKHVEISLTHIFGIGRKTAQNICIDLKIDYTKKISDLSEEEIESIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +Y VEGDLRR ++ NIKRL DL YRG+RHRR LP RGQ T NARTRK K Sbjct: 61 G-NYVVEGDLRRNISTNIKRLQDLASYRGIRHRRKLPTRGQNTKNNARTRKGPKKP 115 >gi|221105230|ref|XP_002170878.1| PREDICTED: similar to ribosomal protein S13 [Hydra magnipapillata] Length = 124 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP+ KR V AL YI G+G + ++ K + +++V + E+ IR+A+ Sbjct: 1 MARIAGVDIPKNKRGVIALTYIFGMGRSRAIEVLEKAKVSQDKKVLDWNDDEIGAIREAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++EG+LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SS-FKIEGELRSEITLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|313836057|gb|EFS73771.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA2] gi|314929593|gb|EFS93424.1| 30S ribosomal protein S13 [Propionibacterium acnes HL044PA1] gi|314970520|gb|EFT14618.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA3] gi|328906198|gb|EGG25973.1| 30S ribosomal protein S13 [Propionibacterium sp. P08] Length = 123 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 57/110 (51%), Positives = 77/110 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI+GIG + + I + RVH+L + +++ +R I Sbjct: 1 MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKTTGISGDLRVHELTDDQLVALRDHI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR Sbjct: 61 EASYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110 >gi|85057777|ref|YP_456693.1| 30S ribosomal protein S13 [Aster yellows witches'-broom phytoplasma AYWB] gi|123518126|sp|Q2NIX9|RS13_AYWBP RecName: Full=30S ribosomal protein S13 gi|84789882|gb|ABC65614.1| SSU ribosomal protein S13P [Aster yellows witches'-broom phytoplasma AYWB] Length = 126 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IP KRVV AL YI+G+G K S I N+L I RV L E ++ +R I Sbjct: 1 MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELKIDQNIRVKNLTEQQLSALRIEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T NA T K K +A Sbjct: 61 TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAAIAG 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|62184756|ref|YP_219541.1| 30S ribosomal protein S13 [Chlamydophila abortus S26/3] gi|329942430|ref|ZP_08291240.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10] gi|81313064|sp|Q5L701|RS13_CHLAB RecName: Full=30S ribosomal protein S13 gi|62147823|emb|CAH63569.1| putative 30s ribosomal protein s13 [Chlamydophila abortus S26/3] gi|313847667|emb|CBY16655.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1] gi|325506969|gb|ADZ18607.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC] gi|328815340|gb|EGF85328.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10] gi|328914304|gb|AEB55137.1| ribosomal protein S13p/S18e [Chlamydophila psittaci 6BC] Length = 122 Score = 156 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I KL + PE R +L E E+ ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAAELTEEEIGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|16329919|ref|NP_440647.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803] gi|2500458|sp|P73299|RS13_SYNY3 RecName: Full=30S ribosomal protein S13 gi|1652405|dbj|BAA17327.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803] Length = 127 Score = 156 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 87/122 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV AL Y++GIG S +I + + P+ RV L + + +++R I Sbjct: 1 MARIAGVDLPRDKRVEIALTYLYGIGLSRSHEILDATGVSPDVRVKDLSDEDALKLRTYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y++EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQRT TNARTR+ + Sbjct: 61 DENYEIEGDLRRWEAMNIKRLGDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|21230385|ref|NP_636302.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21903472|sp|Q9Z3F0|RS13_XANCP RecName: Full=30S ribosomal protein S13 gi|21111942|gb|AAM40226.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 118 Score = 156 bits (397), Expect = 6e-37, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+P K V L I+GIG S+ +C + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR + + IKRLMDLGCYRGLRHRRG P+RGQRT TNARTRK K Sbjct: 61 GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGHPLRGQRTRTNARTRKGPRKAI 116 >gi|21672748|ref|NP_660815.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009164|sp|Q8K971|RS13_BUCAP RecName: Full=30S ribosomal protein S13 gi|21623394|gb|AAM68026.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 118 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K + AL I+GIG K S+ IC I ++ L E E+ +R+ + Sbjct: 1 MARIAGINIPEHKHALIALTSIYGIGKKRSKIICFNANIAENSKISDLKEEEIELLRENV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y EGDLRR +NIKRL+DL CYRGLRHRR LPVRGQRT TNART K K Sbjct: 61 AK-YVTEGDLRREKTLNIKRLIDLNCYRGLRHRRSLPVRGQRTKTNARTCKGPRKAI 116 >gi|189219453|ref|YP_001940094.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4] gi|226712760|sp|B3DVZ3|RS13_METI4 RecName: Full=30S ribosomal protein S13 gi|189186311|gb|ACD83496.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4] Length = 131 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 63/124 (50%), Positives = 82/124 (66%), Gaps = 2/124 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP K ++ AL I+GIG ++ IC + + P+ R L ++ +I Q I Sbjct: 1 MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GV 118 E++ + VEGDLRR + NIKRL + CYRG+RH RGLPVRGQRT TNARTRK K GV Sbjct: 61 EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRKGPRKTIGV 120 Query: 119 ARKR 122 R++ Sbjct: 121 VRRK 124 >gi|327538950|gb|EGF25588.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47] Length = 123 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 52/117 (44%), Positives = 74/117 (63%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 GV+IP K++ +L Y++G+G ++++C KL I P + + +V +I +E+DY Sbjct: 1 MGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLERDY 60 Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 VEG LRR V NI R+ ++ YRG+RHR LPVRGQRT TNARTRK K +K Sbjct: 61 LVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRKGPRKTVAGKK 117 >gi|194335469|ref|YP_002017263.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1] gi|226712772|sp|B4SBX1|RS13_PELPB RecName: Full=30S ribosomal protein S13 gi|194307946|gb|ACF42646.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1] Length = 125 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 61/114 (53%), Positives = 76/114 (66%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S++ I + I P R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGRASAESILQRAGIAPNRKISELNDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 Y+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 62 QYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKT 115 >gi|291286336|ref|YP_003503152.1| 30S 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809] gi|290883496|gb|ADD67196.1| 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809] Length = 122 Score = 156 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 53/122 (43%), Positives = 78/122 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+I K+V L I+G+G +++ I + + +R+ L E ++ IR+ I Sbjct: 1 MARIAGVDIQNNKKVEVGLTNIYGVGRATARLILADINVDLSKRIGDLSEQDISAIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + VEGDLR+ A+NIKRLM++ CYRG RH+ LP RGQ+T +NARTR+ + Sbjct: 61 EDNLTVEGDLRKETALNIKRLMEINCYRGSRHKMHLPCRGQKTRSNARTRRGLAGKRGIK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|239996315|ref|ZP_04716839.1| 30S ribosomal protein S13 [Alteromonas macleodii ATCC 27126] gi|332142184|ref|YP_004427922.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep ecotype'] gi|226712686|sp|B4RT50|RS13_ALTMD RecName: Full=30S ribosomal protein S13 gi|327552206|gb|AEA98924.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep ecotype'] Length = 118 Score = 156 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I+G+G ++ IC + ++ +L E+ + ++R + Sbjct: 1 MARIAGINIPEHKHAVIAIQAIYGVGPTRAKSICAGAGVAENTKIKELDEATIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|78189783|ref|YP_380121.1| 30S ribosomal protein S13 [Chlorobium chlorochromatii CaD3] gi|91207694|sp|Q3APJ7|RS13_CHLCH RecName: Full=30S ribosomal protein S13 gi|78171982|gb|ABB29078.1| SSU ribosomal protein S13P [Chlorobium chlorochromatii CaD3] Length = 125 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 59/114 (51%), Positives = 78/114 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+AGVN+P K V AL +++GIG S+++I K I ++++ +L + E IR+ I + Sbjct: 2 RLAGVNLPLNKHAVIALTHVYGIGRTSAENILRKAGIAYDKKISELSDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +Y+VEG R IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 62 EYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKT 115 >gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172] gi|227236500|gb|EEI86515.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172] Length = 114 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+++PR KR L YI+G+G ++ +I I P+ ++ L E E+ +IR+ + Sbjct: 1 MPRIAGIDLPREKRAEIGLTYIYGVGRATANEILKNTGINPDTKMKDLTEDELGKIREQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + Y +EGDLRR ++NIK L + G YRGLRH+ GLPVRGQ T NARTRK Sbjct: 61 D-HYTIEGDLRRETSLNIKALRENGSYRGLRHKNGLPVRGQNTKNNARTRK 110 >gi|11467401|ref|NP_043258.1| ribosomal protein S13 [Cyanophora paradoxa] gi|1350871|sp|P48137|RR13_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S13 gi|1016202|gb|AAA81289.1| ribosomal protein S13 [Cyanophora paradoxa] Length = 126 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 69/122 (56%), Positives = 89/122 (72%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG S++I +K+ + P+ RV L ++ + Q+R+ I Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSKEILSKIELDPDTRVRDLPDNAIAQLREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E DYQVEGDLRR +MNIKRL D+GCYRG RHR LPVRGQRT TNARTR+ + + Sbjct: 61 ETDYQVEGDLRRFESMNIKRLADIGCYRGRRHRLNLPVRGQRTRTNARTRRGARQTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|307128726|ref|YP_003880756.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI] gi|306483188|gb|ADM90058.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI] Length = 126 Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 51/112 (45%), Positives = 74/112 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA I+G++IP KR + AL YI GIG +S+ I I +V + + QIR+ I Sbjct: 1 MAIISGIDIPNNKRGLIALTYIFGIGLSTSKKIFKNTGIDENLKVSNWSDDNLNQIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + ++EG+L+ + ++IKR+M++GCYRG+RHR GLPVRGQ+T N RTRK Sbjct: 61 SDNLKIEGELKFEIQLDIKRMMEIGCYRGIRHRIGLPVRGQKTKNNCRTRKG 112 >gi|255348886|ref|ZP_05380893.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70] gi|255503426|ref|ZP_05381816.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70s] gi|255507104|ref|ZP_05382743.1| 30S ribosomal protein S13 [Chlamydia trachomatis D(s)2923] gi|289525554|emb|CBJ15032.1| SSU ribosomal protein S13P [Chlamydia trachomatis Sweden2] gi|296435114|gb|ADH17292.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150] gi|296438834|gb|ADH20987.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023] Length = 122 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKCKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|88608326|ref|YP_506178.1| 30S ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama] gi|123492152|sp|Q2GEB8|RS13_NEOSM RecName: Full=30S ribosomal protein S13 gi|88600495|gb|ABD45963.1| ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama] Length = 123 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 57/120 (47%), Positives = 81/120 (67%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R GVN+P K VV AL Y++GIG +++ IC+ LAI ++ L + ++ I I+ Sbjct: 2 RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 D EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK + +A K+ Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVPIAAKK 121 >gi|225459459|ref|XP_002285833.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|302141873|emb|CBI19076.3| unnamed protein product [Vitis vinifera] Length = 167 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP +KRV +L YIHGIG S+ I L + + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGM-ENKITKDLSEEELITLRDEVS 105 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+ I+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 106 K-YMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKK 164 Query: 122 R 122 + Sbjct: 165 K 165 >gi|319760351|ref|YP_004124289.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF] gi|318039065|gb|ADV33615.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF] Length = 119 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GVN+P K V AL I+GIG +++IC + I R++QL E + ++R I Sbjct: 1 MVRIVGVNVPDRKHAVIALMSIYGIGKSLAKEICLNVGIDLHVRINQLSEENIDKLRDEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y +EGDLRR + +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 SK-YVIEGDLRREINLNIKRLIDLGTYRGLRHRRSLPVRGQRTRTNARTRKGPKK 114 >gi|323144986|ref|ZP_08079546.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066] gi|322415265|gb|EFY06039.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066] Length = 128 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAG+N+P K V AL ++GIG +++I + + L E+ V +IR+ + Sbjct: 12 ARIAGINVPDHKIAVIALQSVYGIGPTRARNILAAAGVAESAKFKDLDEASVDKIREEVA 71 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++MNIKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK K Sbjct: 72 K-YTVEGDLRREISMNIKRLVDLGSYRGIRHRRGLPVRGQRTKTNARTRKGPRKSI 126 >gi|330444132|ref|YP_004377118.1| 30S ribosomal protein S13p/S18e [Chlamydophila pecorum E58] gi|328807242|gb|AEB41415.1| ribosomal protein S13p/S18e [Chlamydophila pecorum E58] Length = 122 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIERLNLDPEARTSELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSEYVVEGDLRRRVQSDIKRLIAIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|32423693|gb|AAP81236.1| ribosomal protein S13 [Candidatus Portiera aleyrodidarum] Length = 116 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG NIP K+V +L YI+GIG + IC ++ I +V L ++ ++R+ + Sbjct: 1 MARIAGRNIPDNKQVWVSLTYIYGIGKYRANSICKRIGIDRNVKVRDLNSIQLDKVRKQL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEG+LRR V++NIKRLMDLGCYRGLRH+R LPVRGQRT TNART K KG Sbjct: 61 CK-FVVEGELRREVSVNIKRLMDLGCYRGLRHKRCLPVRGQRTKTNARTCKNINKGI 116 >gi|254796668|ref|YP_003081504.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois] gi|254589916|gb|ACT69278.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois] Length = 123 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 57/120 (47%), Positives = 81/120 (67%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R GVN+P K VV AL Y++GIG +++ IC+ LAI ++ L + ++ I I+ Sbjct: 2 RFLGVNLPDNKAVVVALTYVYGIGLPTARKICSSLAIDGSAKLPDLGQEQLNSIMAYIKN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 D EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK + +A K+ Sbjct: 62 DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVPIAAKK 121 >gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155] gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155] Length = 130 Score = 155 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 54/119 (45%), Positives = 80/119 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K++ +L YI+GIG ++ +I K I P++R +L ++++ I + + Sbjct: 1 MPRIMGVDIPTNKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVKLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 + Y+VEGDLRR +A++++RL + CYRG RH+ LP RGQRT TNARTRK K A Sbjct: 61 DSSYEVEGDLRRQLALSVRRLQAVNCYRGRRHKHSLPCRGQRTKTNARTRKGKKKTIGA 119 >gi|15835410|ref|NP_297169.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg] gi|270285590|ref|ZP_06194984.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg] gi|270289600|ref|ZP_06195902.1| 30S ribosomal protein S13 [Chlamydia muridarum Weiss] gi|301336986|ref|ZP_07225188.1| 30S ribosomal protein S13 [Chlamydia muridarum MopnTet14] gi|14195202|sp|Q9PJN2|RS13_CHLMU RecName: Full=30S ribosomal protein S13 gi|7190824|gb|AAF39599.1| ribosomal protein S13 [Chlamydia muridarum Nigg] Length = 122 Score = 155 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|15605238|ref|NP_220024.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/UW-3/CX] gi|76789246|ref|YP_328332.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/HAR-13] gi|237802938|ref|YP_002888132.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/Jali20/OT] gi|237804860|ref|YP_002889014.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/TZ1A828/OT] gi|255311327|ref|ZP_05353897.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276] gi|255317628|ref|ZP_05358874.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276s] gi|91207695|sp|Q3KLI8|RS13_CHLTA RecName: Full=30S ribosomal protein S13 gi|290463296|sp|P0CE04|RS13_CHLTR RecName: Full=30S ribosomal protein S13 gi|3328946|gb|AAC68110.1| S13 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX] gi|76167776|gb|AAX50784.1| SSU ribosomal protein S13P [Chlamydia trachomatis A/HAR-13] gi|231273160|emb|CAX10073.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/TZ1A828/OT] gi|231274172|emb|CAX10966.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/Jali20/OT] gi|296436042|gb|ADH18216.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768] gi|296436970|gb|ADH19140.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222] gi|296437903|gb|ADH20064.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074] gi|297140403|gb|ADH97161.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301] gi|297748639|gb|ADI51185.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-EC] gi|297749519|gb|ADI52197.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-LC] Length = 122 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|281357930|ref|ZP_06244415.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548] gi|281315588|gb|EFA99616.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548] Length = 131 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 56/112 (50%), Positives = 76/112 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP KRV +L Y++G+G + +I K+ I P+ + L ++ I + + Sbjct: 1 MPRIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + D VEGDLRRT+A +I+RL + CYRG+RHRR LPVRGQRT TNARTRK Sbjct: 61 QDDLLVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQRTKTNARTRKG 112 >gi|29839880|ref|NP_828986.1| 30S ribosomal protein S13 [Chlamydophila caviae GPIC] gi|89898701|ref|YP_515811.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56] gi|32363224|sp|P59752|RS13_CHLCV RecName: Full=30S ribosomal protein S13 gi|123482768|sp|Q252X2|RS13_CHLFF RecName: Full=30S ribosomal protein S13 gi|29834227|gb|AAP04864.1| ribosomal protein S13 [Chlamydophila caviae GPIC] gi|89332073|dbj|BAE81666.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56] Length = 122 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/122 (47%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I KL + PE R +L E E+ ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAVELTEEEIGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSEYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|194334837|ref|YP_002016697.1| 30S ribosomal protein S13 [Prosthecochloris aestuarii DSM 271] gi|226712776|sp|B4S5A4|RS13_PROA2 RecName: Full=30S ribosomal protein S13 gi|194312655|gb|ACF47050.1| ribosomal protein S13 [Prosthecochloris aestuarii DSM 271] Length = 125 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/114 (50%), Positives = 79/114 (69%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +++GIG S+++I + I P +++ ++ + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHVYGIGKTSARNILERAGIDPAKKIAEMSDEEAHAIREIIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 +Y+VEG R + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK K Sbjct: 62 EYKVEGQARGLQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKT 115 >gi|166154724|ref|YP_001654842.1| 30S ribosomal protein S13 [Chlamydia trachomatis 434/Bu] gi|166155599|ref|YP_001653854.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335998|ref|ZP_07224242.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2tet1] gi|226712714|sp|B0B883|RS13_CHLT2 RecName: Full=30S ribosomal protein S13 gi|226712716|sp|B0BCE8|RS13_CHLTB RecName: Full=30S ribosomal protein S13 gi|620027|gb|AAA74987.1| ribosomal protein S13 [Chlamydia trachomatis] gi|165930712|emb|CAP04209.1| SSU ribosomal protein S13P [Chlamydia trachomatis 434/Bu] gi|165931587|emb|CAP07163.1| SSU ribosomal protein S13P [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 122 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S++I +L + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTIAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|254412272|ref|ZP_05026047.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420] gi|196181238|gb|EDX76227.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420] Length = 127 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 74/101 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIA V++PR KR+ L YI+GIG S++I K + P+ RV L +++V +R + Sbjct: 1 MARIASVDLPRDKRIEIGLTYIYGIGLSRSKEILAKTGVNPDIRVKDLSDADVATLRSVV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E DYQVEGDLRR AMNIKRL+D+G YRG RHR+GLPVRGQ Sbjct: 61 EGDYQVEGDLRRWEAMNIKRLVDIGTYRGRRHRQGLPVRGQ 101 >gi|302850780|ref|XP_002956916.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f. nagariensis] gi|300257797|gb|EFJ42041.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f. nagariensis] Length = 137 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI V IP +KR+ +L YI+GIG ++Q I + ++ ++L E EV ++RQ +++ Sbjct: 17 RINNVEIPNSKRIEVSLQYIYGIGQTTAQTILRDTGV-ENKKTYELNEEEVNKLRQEVDK 75 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y E DLRR V+ NIKRL D+GCYRG RH GLPVRGQRT TNARTRK K +K+ Sbjct: 76 -YTTEADLRRIVSQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 134 >gi|325108637|ref|YP_004269705.1| 30S ribosomal protein S13P [Planctomyces brasiliensis DSM 5305] gi|324968905|gb|ADY59683.1| SSU ribosomal protein S13P [Planctomyces brasiliensis DSM 5305] Length = 128 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 75/121 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K +L Y++GIG ++ +IC +L I P + + + + Q+ + Sbjct: 1 MPRVQGVDIPNNKAAYISLTYLYGIGRHTAIEICRRLQIEPTMKAKDIGDDTLAQLNNLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + DY +EG LRR +I RL ++ YRG+RHRRGLPVRGQRT TNARTRK K + Sbjct: 61 DTDYVIEGQLRRQTQQHIARLREIQSYRGIRHRRGLPVRGQRTITNARTRKGVRKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|298243944|ref|ZP_06967751.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963] gi|297556998|gb|EFH90862.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963] Length = 126 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 62/101 (61%), Positives = 78/101 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +LCYI+GIG +SQ I K I P+ RV L E EV ++R+ I Sbjct: 1 MARIAGVDIPREKRVEISLCYIYGIGLTTSQKILEKTRINPDTRVKDLTEEEVNRLREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 +++++VEGDLRR + NIKRL+D+GCYRGLRHRR LPV GQ Sbjct: 61 DREHKVEGDLRREIQTNIKRLIDIGCYRGLRHRRNLPVHGQ 101 >gi|259506744|ref|ZP_05749644.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] gi|259165685|gb|EEW50239.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314] Length = 108 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 49/108 (45%), Positives = 71/108 (65%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI+GIG ++ + + + P+ R L + ++ +R IE ++VEGDLRR V Sbjct: 1 MEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVIEATWKVEGDLRREV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K +K+ Sbjct: 61 QADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108 >gi|212704606|ref|ZP_03312734.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098] gi|212672005|gb|EEB32488.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098] Length = 108 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 60/106 (56%), Positives = 78/106 (73%) Query: 17 RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76 AL YI+GIG ++ I + + ER + L EV +IR+ +EQ+Y+VEGDLRR ++ Sbjct: 3 IALTYIYGIGRATALQILSTTGVNWERNIDDLSADEVNEIRKELEQNYKVEGDLRREIST 62 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 NIKRLMD+GC+RGLRHRRGLPV GQRTHTNARTRK +G V +K+ Sbjct: 63 NIKRLMDIGCFRGLRHRRGLPVHGQRTHTNARTRKGPRRGVVGKKK 108 >gi|299830397|ref|YP_003734612.1| ribosomal protein S13 [Kryptoperidinium foliaceum] gi|297385099|gb|ADI40397.1| ribosomal protein S13 [Kryptoperidinium foliaceum] Length = 123 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ AL YIHGIG +++ I I E RV+ L + + +RQ I Sbjct: 1 MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKQIIETADIDSEVRVYDLTTEQTVALRQTI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 EESDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|87306333|ref|ZP_01088480.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645] gi|87290512|gb|EAQ82399.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645] Length = 123 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 57/117 (48%), Positives = 80/117 (68%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 GV+IP K +L Y++G+G ++++++C K+ I ER+ +L E E+ +I +E +Y Sbjct: 1 MGVDIPNDKPTWISLTYLYGVGPRTARELCVKVGISQERKAGELHEDELSRIAGLLETEY 60 Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 VEG LRR +A NI+RL + CYRG+RHRRGLPVRGQRT TNARTRK K +K Sbjct: 61 TVEGPLRRQIAQNIQRLNRIVCYRGMRHRRGLPVRGQRTRTNARTRKGPKKTVAGKK 117 >gi|189501187|ref|YP_001960657.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides BS1] gi|226712713|sp|B3EP37|RS13_CHLPB RecName: Full=30S ribosomal protein S13 gi|189496628|gb|ACE05176.1| ribosomal protein S13 [Chlorobium phaeobacteroides BS1] Length = 125 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 60/114 (52%), Positives = 78/114 (68%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RIAGVN+P K V AL +I+GIG S+++I ++ I P R++ +L + E IR+ I + Sbjct: 2 RIAGVNLPLNKHAVIALTHIYGIGKTSAKNILERVGIDPARKISELNDEEAHSIREVIAE 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 DY VEG R +++KRLMD+GCYRGLRHRR LP RGQ T TNARTRK K Sbjct: 62 DYIVEGQARGEQQLSVKRLMDIGCYRGLRHRRSLPARGQNTQTNARTRKGRRKT 115 >gi|15617096|ref|NP_240309.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681848|ref|YP_002468234.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682403|ref|YP_002468787.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471553|ref|ZP_05635552.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11387083|sp|P57569|RS13_BUCAI RecName: Full=30S ribosomal protein S13 gi|254811134|sp|B8D9S5|RS13_BUCA5 RecName: Full=30S ribosomal protein S13 gi|254811135|sp|B8D827|RS13_BUCAT RecName: Full=30S ribosomal protein S13 gi|25294711|pir||C84988 30S ribosomal protein S13 [imported] - Buchnera sp. (strain APS) gi|10039161|dbj|BAB13195.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622136|gb|ACL30292.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624691|gb|ACL30846.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086224|gb|ADP66306.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086801|gb|ADP66882.1| 30S ribosomal protein S13 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087388|gb|ADP67468.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087885|gb|ADP67964.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 118 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K + AL I+GIG K S+ IC+ IP ++ L E ++ +R + Sbjct: 1 MARIAGINIPENKHTLIALTAIYGIGKKRSKFICSIANIPEHSKIVDLNEEQIDLLRTHV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR +NIKRL+DL CYRGLRHRR LPV GQRT TNART K K Sbjct: 61 AK-YVIEGDLRRERTLNIKRLIDLSCYRGLRHRRSLPVHGQRTKTNARTCKGPRKPI 116 >gi|227505243|ref|ZP_03935292.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940] gi|227198142|gb|EEI78190.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940] Length = 108 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 51/108 (47%), Positives = 73/108 (67%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI+GIG ++++ K I P+ R L + ++ +R IE ++VEGDLRR V Sbjct: 1 MEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDVIEATWKVEGDLRRQV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK K +K+ Sbjct: 61 QADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108 >gi|225165490|ref|ZP_03727316.1| ribosomal protein S13 [Opitutaceae bacterium TAV2] gi|224800267|gb|EEG18671.1| ribosomal protein S13 [Opitutaceae bacterium TAV2] Length = 125 Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV+IP K+V +L YI+GIG + + + + P+ R L E ++ +I Q I Sbjct: 1 MPRLLGVDIPAKKKVSYSLRYIYGIGPVRADQVVKEAELNPDMRAQDLTEEQLNKILQVI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E + VEGDLRR+ ++KRL +GCYRG+RHRR LPVRGQRT TNARTRK + Sbjct: 61 TEHKWTVEGDLRRSHTADLKRLQAIGCYRGIRHRRSLPVRGQRTSTNARTRKGPRRTVGV 120 Query: 120 RK 121 K Sbjct: 121 TK 122 >gi|71842330|ref|YP_277418.1| ribosomal protein S13 [Emiliania huxleyi] gi|91207764|sp|Q4G349|RR13_EMIHU RecName: Full=30S ribosomal protein S13, chloroplastic gi|60101573|gb|AAX13917.1| ribosomal protein S13 [Emiliania huxleyi] Length = 124 Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+GV++PR KR+ L I GIG S+ I + P+ R L + +V +R I Sbjct: 1 MVRISGVDLPRNKRIQIGLTSIFGIGNTSADKILTTANLSPDIRCSDLTDEQVSSLRTII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 ++ YQ EGDLRR ++NIKRL ++G G RHR LPVRGQRT TNARTRK Sbjct: 61 DESYQTEGDLRRVYSLNIKRLTEIGSAAGRRHRVNLPVRGQRTRTNARTRKG 112 >gi|15618538|ref|NP_224824.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae CWL029] gi|15836160|ref|NP_300684.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae J138] gi|16752412|ref|NP_444671.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae AR39] gi|33241985|ref|NP_876926.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae TW-183] gi|6831656|sp|Q9Z7S6|RS13_CHLPN RecName: Full=30S ribosomal protein S13 gi|4376926|gb|AAD18767.1| S13 Ribosomal Protein [Chlamydophila pneumoniae CWL029] gi|7189053|gb|AAF38002.1| ribosomal protein S13 [Chlamydophila pneumoniae AR39] gi|8979000|dbj|BAA98835.1| S13 ribosomal protein [Chlamydophila pneumoniae J138] gi|33236495|gb|AAP98583.1| ribosomal protein S13 [Chlamydophila pneumoniae TW-183] gi|269302412|gb|ACZ32512.1| ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN] Length = 122 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 79/122 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI G++IP K++ +L YI+GIG S +I KL + PE R +L E EV ++ + Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGSARSDEIIKKLKLDPEARASELTEEEVGRLNSLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + +Y VEGDLRR V +IKRL+ + YRG RHR LPVRGQRT TN+RTRK K + Sbjct: 61 QSEYTVEGDLRRRVQSDIKRLIAIHSYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|187734946|ref|YP_001877058.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835] gi|226712685|sp|B2UNG5|RS13_AKKM8 RecName: Full=30S ribosomal protein S13 gi|187424998|gb|ACD04277.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835] Length = 125 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 3/125 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ G IP KR+ +L YI+GIG +S+ I + I P+ R QL + ++ +I Q I Sbjct: 1 MARLFGTEIPNEKRIEASLPYIYGIGRSTSKRILEQAGINPDIRTGQLTDEQLTKIVQVI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK--GG 117 D +EGDLRR +KRL + CYRG RHRRGLPVRGQRT TNARTRK K G Sbjct: 61 TTDGILIEGDLRREKQSILKRLTSINCYRGQRHRRGLPVRGQRTRTNARTRKGKKKTVGA 120 Query: 118 VARKR 122 A+K+ Sbjct: 121 QAKKK 125 >gi|223936406|ref|ZP_03628318.1| ribosomal protein S13 [bacterium Ellin514] gi|223894924|gb|EEF61373.1| ribosomal protein S13 [bacterium Ellin514] Length = 131 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI GV IP KR+ +L YI+GIG ++++I I P R L E ++ QI AI Sbjct: 1 MARIIGVEIPGEKRIDISLRYIYGIGPVNAKEILENAKIDPSIRAKDLSEQQMSQIVHAI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ Y +EGDLRR + MN+KRL + CYRG+RH R LPVRGQRT TNARTRK K Sbjct: 61 QEGKYVIEGDLRRELGMNLKRLQGIKCYRGVRHLRSLPVRGQRTQTNARTRKGPRKTV 118 >gi|170077664|ref|YP_001734302.1| ribosomal protein S13 [Synechococcus sp. PCC 7002] gi|226712794|sp|B1XJI6|RS13_SYNP2 RecName: Full=30S ribosomal protein S13 gi|169885333|gb|ACA99046.1| ribosomal protein S13 [Synechococcus sp. PCC 7002] Length = 125 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL Y++GIG +Q+I + P+ RV L + + +++R + Sbjct: 1 MARIAGVDLPRDKRIEIALTYVYGIGLSRAQEIIANTGVNPDTRVRDLSDEDALKLRSYV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +YQVEGDLRR +MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+ + Sbjct: 61 TDNYQVEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRVTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|22297647|ref|NP_680894.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1] gi|32363319|sp|Q8DML1|RS13_THEEB RecName: Full=30S ribosomal protein S13 gi|22293824|dbj|BAC07656.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1] Length = 126 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K + P+ R L ++++ +R AI Sbjct: 1 MARIAGVDLPRDKRIEIALTYIYGIGLTRSKEILAKTGVNPDTRTRDLTDADIAALRAAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 ++ YQVEGDLRR AMNIKRLMD+GCYRG RHR GLPVRGQ Sbjct: 61 DE-YQVEGDLRRLEAMNIKRLMDIGCYRGRRHRLGLPVRGQ 100 >gi|327402760|ref|YP_004343598.1| 30S ribosomal protein S13P [Fluviicola taffensis DSM 16823] gi|327318268|gb|AEA42760.1| SSU ribosomal protein S13P [Fluviicola taffensis DSM 16823] Length = 124 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++P+ KR V L YI GIG +++ + I +V + ++ IR AI Sbjct: 1 MARIAGIDLPKNKRGVIGLTYIFGIGRSTAKKVLVNNGIDENIKVQDWNDDQIALIRTAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + EG LR + +NIKRLMD+GC RG+RHR GLP+RGQRT N+RTRK K + Sbjct: 61 SE-IKTEGQLRSEIQLNIKRLMDIGCTRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|220906741|ref|YP_002482052.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7425] gi|254811145|sp|B8HMS6|RS13_CYAP4 RecName: Full=30S ribosomal protein S13 gi|219863352|gb|ACL43691.1| ribosomal protein S13 [Cyanothece sp. PCC 7425] Length = 126 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRV L YI+GIG SQ I + + P+ R+ +L ++++ +R A+ Sbjct: 1 MARIAGVDLPRDKRVEIGLTYIYGIGLTRSQHILAETGVNPDTRIRELTDADISALRTAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E YQVEGDLRR MNIKRL D+GCYRG RHR GLPVRGQ Sbjct: 61 EA-YQVEGDLRRLENMNIKRLQDIGCYRGRRHRMGLPVRGQ 100 >gi|33519680|ref|NP_878512.1| 30S ribosomal protein S13 [Candidatus Blochmannia floridanus] gi|81666638|sp|Q7VQC6|RS13_BLOFL RecName: Full=30S ribosomal protein S13 gi|33517343|emb|CAD83728.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia floridanus] Length = 118 Score = 153 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K V AL I+GIG ++ IC + + ++ QL + + ++R I Sbjct: 1 MVRIAGVNVPDRKHAVIALMSIYGIGRSRAKLICLSIGVDEYTKIGQLSDVYIDKMRNEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK K Sbjct: 61 AK-YVVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTRKGPKKLI 116 >gi|221133737|ref|ZP_03560042.1| 30S ribosomal protein S13 [Glaciecola sp. HTCC2999] Length = 118 Score = 153 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V A+ I GIG ++ IC + ++ L E+ + ++R + Sbjct: 1 MARIAGINIPEHKHTVIAIQAIFGIGATRAKSICASAGVAESTKIKDLDETTIDKLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK K Sbjct: 61 AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116 >gi|37523143|ref|NP_926520.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421] gi|81708852|sp|Q7NFF2|RS13_GLOVI RecName: Full=30S ribosomal protein S13 gi|35214146|dbj|BAC91515.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421] Length = 127 Score = 153 bits (388), Expect = 7e-36, Method: Composition-based stats. Identities = 61/101 (60%), Positives = 70/101 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI GIG + I I P RV +L + +V +R+ I Sbjct: 1 MARIAGVDIPREKRVEIALTYIFGIGPSRATQILLSTGINPNLRVRELTDVQVSLLREEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 EQ YQVEGDLRR +NIKRLMD+GC RG RHR GLPVRGQ Sbjct: 61 EQKYQVEGDLRRFENINIKRLMDIGCLRGRRHRLGLPVRGQ 101 >gi|41469448|gb|AAS07249.1| putative 30S ribosomal protein S13 [Oryza sativa Japonica Group] gi|108710647|gb|ABF98442.1| 30S ribosomal protein S13, putative, expressed [Oryza sativa Japonica Group] gi|164375541|gb|ABY52938.1| chloroplast 30S ribosomal protein S13 precursor [Oryza sativa Japonica Group] gi|222625639|gb|EEE59771.1| hypothetical protein OsJ_12269 [Oryza sativa Japonica Group] Length = 171 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 3/120 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y +EGDL+R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K + VA+K+ Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG-RRASVAKKK 164 >gi|218193603|gb|EEC76030.1| hypothetical protein OsI_13197 [Oryza sativa Indica Group] Length = 171 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 3/120 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y +EGDL+R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K + VA+K+ Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG-RRASVAKKK 164 >gi|227502696|ref|ZP_03932745.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725] gi|227076426|gb|EEI14389.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725] Length = 108 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 73/108 (67%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI+GIG ++++ K I P+ R L + +V +R AIE ++VEGDLRR V Sbjct: 1 MEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAIEGSWKVEGDLRRQV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK K +K+ Sbjct: 61 QADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108 >gi|71891996|ref|YP_277726.1| 30S ribosomal protein S13 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|91207689|sp|Q493I7|RS13_BLOPB RecName: Full=30S ribosomal protein S13 gi|71796102|gb|AAZ40853.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 121 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVN+P K V AL I+GIG ++ IC I ++ +L E + ++R A+ Sbjct: 1 MVRIAGVNVPDRKHAVVALMSIYGIGKSRARSICLNTGIDEHVQLCKLSEIHIDKLRDAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 ++ Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNART K K Sbjct: 61 DE-YIVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTCKGPRKS 115 >gi|15837775|ref|NP_298463.1| 30S ribosomal protein S13 [Xylella fastidiosa 9a5c] gi|32363422|sp|Q9PE55|RS13_XYLFA RecName: Full=30S ribosomal protein S13 gi|9106139|gb|AAF83983.1|AE003951_8 30S ribosomal protein S13 [Xylella fastidiosa 9a5c] Length = 118 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR V M IKRLMDL CYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116 >gi|404593|gb|AAD10542.1| uncertain [Mycoplasma genitalium] Length = 117 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 58/114 (50%), Positives = 77/114 (67%), Gaps = 1/114 (0%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 +IP KR+ AL YI GIG S++ I K I P++RV L E E++ IR A Y++E Sbjct: 1 DIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA-ASGYKIE 59 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 GDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK K +K Sbjct: 60 GDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRKGPRKTVANKK 113 >gi|182412029|ref|YP_001817095.1| 30S ribosomal protein S13 [Opitutus terrae PB90-1] gi|226712770|sp|B1ZNC6|RS13_OPITP RecName: Full=30S ribosomal protein S13 gi|177839243|gb|ACB73495.1| ribosomal protein S13 [Opitutus terrae PB90-1] Length = 129 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV IP K+V +L YI+GIG + + + + P+ R L E ++ +I I Sbjct: 1 MPRLLGVEIPAKKKVAYSLRYINGIGPTRADLLVKEAGLSPDMRAQDLTEEQLNKILHLI 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 E + +EGDLRR +A N+KRL + CYRG+RHRRGLPVRGQRT TNARTRK K Sbjct: 61 TEHKWVLEGDLRREIAGNLKRLQAINCYRGVRHRRGLPVRGQRTSTNARTRKGPRKTV 118 >gi|299830618|ref|YP_003735066.1| 30S ribosomal protein S13 [Durinskia baltica] gi|297384982|gb|ADI40281.1| 30S ribosomal protein S13 [Durinskia baltica] Length = 123 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ AL YIHGIG +++ + I + RV+ L + + +RQ I Sbjct: 1 MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKKLIELAEIDSDLRVYDLTTEQAVALRQTI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ESSDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|284929582|ref|YP_003422104.1| 30S ribosomal protein S13P [cyanobacterium UCYN-A] gi|284810026|gb|ADB95723.1| SSU ribosomal protein S13P [cyanobacterium UCYN-A] Length = 127 Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 53/101 (52%), Positives = 72/101 (71%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV++PR KR+ L Y+ GIG SQ I + + P+ RV L + ++ +R I Sbjct: 1 MARISGVDLPRDKRIEIGLTYLFGIGLSRSQKILAETGVNPDIRVRDLSDEDLTSLRVYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 ++++Q+EGDLRR AMNIKRL D+G YRG RHR+GLPVRGQ Sbjct: 61 DENFQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101 >gi|255630109|gb|ACU15408.1| unknown [Glycine max] Length = 162 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 R+ GV IP KR+ +L YIHG+G ++ I + + + +L E E+I +R + Sbjct: 43 VRVGGVEIPNNKRIEYSLQYIHGVGRTRAKQILCDIQMD-NKITKELTEEELITLRDEVS 101 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NIKRL D+ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 102 K-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKK 160 Query: 122 R 122 + Sbjct: 161 K 161 >gi|168704698|ref|ZP_02736975.1| 30S ribosomal protein S13 [Gemmata obscuriglobus UQM 2246] Length = 127 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 56/121 (46%), Positives = 78/121 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI GV+IP K +L YI G+G ++ ++C KL + P+RR +L + E+ +I + Sbjct: 1 MPRIQGVDIPPDKPTHISLRYIRGLGPTTALEVCEKLNLDPQRRAKELNDKEIAEIAVLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEG LRR NI RL ++ CYRG RHR+ LPVRGQR+ TNARTRK K + Sbjct: 61 DKEYLVEGPLRRVEGSNIARLKEIKCYRGERHRKNLPVRGQRSKTNARTRKGIRKTVAGK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|90994485|ref|YP_536975.1| ribosomal protein S13 [Porphyra yezoensis] gi|122194694|sp|Q1XDJ3|RR13_PORYE RecName: Full=30S ribosomal protein S13-2, chloroplastic gi|90819049|dbj|BAE92418.1| 30S ribosomal protein S13 [Porphyra yezoensis] Length = 126 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 86/122 (70%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + + L + +V+ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT TNARTR+ K + Sbjct: 61 ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRTNARTRRGGKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|118602235|ref|YP_903450.1| 30S ribosomal protein S13 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|158706273|sp|A1AVM2|RS13_RUTMC RecName: Full=30S ribosomal protein S13 gi|118567174|gb|ABL01979.1| SSU ribosomal protein S13P [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 117 Score = 151 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG ++ C L + P +V + E ++ IR + Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAKATCKILKLDPATKVVDIAEDQLELIRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y+VEGDLRR V+M+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK + Sbjct: 61 AK-YEVEGDLRRQVSMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRKGPRRLI 116 >gi|154706597|ref|YP_001425160.1| 30S ribosomal protein S13 [Coxiella burnetii Dugway 5J108-111] gi|161349360|ref|ZP_02096744.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177'] gi|161830195|ref|YP_001596207.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 331] gi|212213228|ref|YP_002304164.1| 30S ribosomal protein S13 [Coxiella burnetii CbuG_Q212] gi|212218096|ref|YP_002304883.1| 30S ribosomal protein S13 [Coxiella burnetii CbuK_Q154] gi|189040499|sp|A9KD09|RS13_COXBN RecName: Full=30S ribosomal protein S13 gi|189040500|sp|A9NAZ2|RS13_COXBR RecName: Full=30S ribosomal protein S13 gi|226712723|sp|B6J5F4|RS13_COXB1 RecName: Full=30S ribosomal protein S13 gi|226712724|sp|B6J241|RS13_COXB2 RecName: Full=30S ribosomal protein S13 gi|154355883|gb|ABS77345.1| SSU ribosomal protein S13P [Coxiella burnetii Dugway 5J108-111] gi|161762062|gb|ABX77704.1| ribosomal protein S13 [Coxiella burnetii RSA 331] gi|164601575|gb|EDQ95166.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177'] gi|212011638|gb|ACJ19019.1| SSU ribosomal protein S13P [Coxiella burnetii CbuG_Q212] gi|212012358|gb|ACJ19738.1| SSU ribosomal protein S13P [Coxiella burnetii CbuK_Q154] Length = 119 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP K AL I+GIG + +IC + I P +V L E+E+ +R + Sbjct: 3 ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK K Sbjct: 63 K-FSVEGDLRRERSMDIKRKMDLGTYEGIRHRRGLPLRGQRTRSNARTRKGKRKPI 117 >gi|12751544|ref|NP_043597.2| ribosomal protein S13 [Odontella sinensis] gi|32363503|sp|P49501|RR13_ODOSI RecName: Full=30S ribosomal protein S13, chloroplastic gi|13620208|emb|CAA91629.2| 30S ribosomal protein S13 [Odontella sinensis] Length = 123 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YIHGIG S++ I I PE R L + I +R + Sbjct: 1 MVRLIGVDLPRNKRIAYALTYIHGIGITSARKIIELAEISPETRTDDLTTEQTIALRDQL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E D +EGDLR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ESIDLNLEGDLRCFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|118411078|ref|YP_874473.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum] gi|125987678|sp|A0T0J8|RR13_PHATC RecName: Full=30S ribosomal protein S13, chloroplastic gi|116739825|gb|ABK20696.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum] Length = 123 Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR KR+ AL YIHGIG S++ I I PE R L E + +RQ + Sbjct: 1 MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ D ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|293977951|ref|YP_003543381.1| 30S ribosomal protein S13P [Candidatus Sulcia muelleri DMIN] gi|292667882|gb|ADE35517.1| SSU ribosomal protein S13P [Candidatus Sulcia muelleri DMIN] Length = 123 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 76/121 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA ++G+ IP K + AL YI GIG +S+ I I +V + ++ +IR+ I Sbjct: 1 MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVRNWSDEDINKIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++EG+LR + ++IKR++++GCYRG+RHR GLPVRGQ+T N RTRK K + Sbjct: 61 SSNLRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRKGKKKTVANK 120 Query: 121 K 121 K Sbjct: 121 K 121 >gi|118465138|ref|YP_883536.1| 30S ribosomal protein S13 [Mycobacterium avium 104] gi|118166425|gb|ABK67322.1| ribosomal protein S13p/S18e [Mycobacterium avium 104] Length = 110 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 70/108 (64%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI+G+G S +I I + R L + ++ +R IE + +VEGDLRR V Sbjct: 1 MEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYIEANLKVEGDLRREV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK + +K+ Sbjct: 61 QADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGKKK 108 >gi|29653612|ref|NP_819304.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 493] gi|32363225|sp|P59753|RS13_COXBU RecName: Full=30S ribosomal protein S13 gi|29540874|gb|AAO89818.1| SSU ribosomal protein S13P [Coxiella burnetii RSA 493] Length = 119 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 61/116 (52%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARIAGVNIP K AL I+GIG + +IC + I P +V L E+E+ +R + Sbjct: 3 ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + VEGDLRR +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK K Sbjct: 63 K-FSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRKGKRKPI 117 >gi|225860275|ref|YP_002741784.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus pneumoniae Taiwan19F-14] gi|225727097|gb|ACO22948.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus pneumoniae Taiwan19F-14] Length = 109 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKN 104 >gi|224082224|ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1| predicted protein [Populus trichocarpa] Length = 168 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP +KRV +L YIHGIG ++ I + L + + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTM-ENKITKDLSEDELITLRDEVS 105 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 106 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKK 164 Query: 122 R 122 + Sbjct: 165 K 165 >gi|224066873|ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1| unknown [Populus trichocarpa] gi|222843982|gb|EEE81529.1| predicted protein [Populus trichocarpa] Length = 168 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP +KRV +L YIHGIG +++ I + L++ + L E E+I +R + Sbjct: 47 ARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSM-ENKITKDLSEEELIILRDEVS 105 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 106 K-YTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKK 164 Query: 122 R 122 + Sbjct: 165 K 165 >gi|296282605|ref|ZP_06860603.1| 30S ribosomal protein S13 [Citromicrobium bathyomarinum JL354] Length = 108 Score = 150 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 63/108 (58%), Positives = 79/108 (73%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 ++ AL YIHGIG + +I +KL I + RV L + EV++IR+ I++++ VEGDLRR Sbjct: 1 MIIALTYIHGIGRTKAVEIADKLGIDHKTRVQDLTDEEVLRIRETIDEEHTVEGDLRRQT 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 AMNIKRLMDL YRGLRHR GLPVRGQRTHTNARTRK K +K+ Sbjct: 61 AMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGKKK 108 >gi|28198374|ref|NP_778688.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1] gi|71901053|ref|ZP_00683163.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|182681015|ref|YP_001829175.1| 30S ribosomal protein S13 [Xylella fastidiosa M23] gi|32363279|sp|Q87E61|RS13_XYLFT RecName: Full=30S ribosomal protein S13 gi|226712807|sp|B2I8J0|RS13_XYLF2 RecName: Full=30S ribosomal protein S13 gi|28056444|gb|AAO28337.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1] gi|71729180|gb|EAO31301.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|182631125|gb|ACB91901.1| ribosomal protein S13 [Xylella fastidiosa M23] gi|307579484|gb|ADN63453.1| 30S ribosomal protein S13 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 118 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L ESE+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSESEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRKGPRKAI 116 >gi|149001659|ref|ZP_01826632.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69] gi|147760117|gb|EDK67106.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69] Length = 109 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IP KRVV +L Y++GIG +S+ I I + RV L + IR+ + Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 61 DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKK 104 >gi|226500900|ref|NP_001149618.1| LOC100283244 [Zea mays] gi|195628536|gb|ACG36098.1| 30S ribosomal protein S13 [Zea mays] Length = 170 Score = 150 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 3/120 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKXVGK 105 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y +EGDL+R + I+RL ++ CY+G+RH+ GLPVRGQRT N RT K + VA+K+ Sbjct: 106 -YMIEGDLKRFNRVAIERLKEIRCYKGIRHKLGLPVRGQRTKNNCRTLKG-KRASVAKKK 163 >gi|71276501|ref|ZP_00652776.1| Ribosomal protein S13 [Xylella fastidiosa Dixon] gi|71900588|ref|ZP_00682715.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|170729721|ref|YP_001775154.1| 30S ribosomal protein S13 [Xylella fastidiosa M12] gi|226712808|sp|B0U5M0|RS13_XYLFM RecName: Full=30S ribosomal protein S13 gi|71162678|gb|EAO12405.1| Ribosomal protein S13 [Xylella fastidiosa Dixon] gi|71729645|gb|EAO31749.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1] gi|167964514|gb|ACA11524.1| 30S ribosomal protein S13 [Xylella fastidiosa M12] Length = 118 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 61/117 (52%), Positives = 76/117 (64%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGVN+ K V L I+GIG S+ +C+ + ++ L E E+ ++R + Sbjct: 1 MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 61 GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRKGPRKAI 116 >gi|158334434|ref|YP_001515606.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017] gi|189040488|sp|B0C432|RS13_ACAM1 RecName: Full=30S ribosomal protein S13 gi|158304675|gb|ABW26292.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017] Length = 126 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SQ+I + P+ RV +L + +V +R A+ Sbjct: 1 MARIAGVDLPRDKRIEIGLTYIYGIGLTRSQEILAATGVNPDTRVRELGDQDVAALRNAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 YQVEGDLRR +MN+KRLMD+G YRG RHR GLPVRGQRT TN+RTR+ + + Sbjct: 61 -AGYQVEGDLRRWESMNVKRLMDIGSYRGRRHRAGLPVRGQRTRTNSRTRRSAKRTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|148244351|ref|YP_001219045.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA] gi|158706294|sp|A5CXI6|RS13_VESOH RecName: Full=30S ribosomal protein S13 gi|146326178|dbj|BAF61321.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA] Length = 117 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K +V L I GIG +++IC L + P +V + E+++ IR I Sbjct: 1 MARIAGINIPTHKHIVIGLQSIFGIGDTRAREICITLKLDPVTKVANITENQLELIRVEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y+VEGDLRR +AM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK + Sbjct: 61 AK-YEVEGDLRRQLAMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRKGPRRLI 116 >gi|281415635|ref|ZP_06247377.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665] Length = 108 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 72/108 (66%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 ++ AL YI+G+G +++ I P RV L +++Q+R IE Y+VEGDLRR V Sbjct: 1 MIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHIEGSYKVEGDLRREV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK K +K+ Sbjct: 61 AADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGKKK 108 >gi|330318670|gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis] Length = 165 Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 R+ GV IP KR+ +L YIHGIG +S+ I L++ + L E E+I R + Sbjct: 44 VRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMD-NKITKDLFEEELISFRDQVS 102 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y VEGD RR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 103 K-YMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKK 161 Query: 122 R 122 + Sbjct: 162 K 162 >gi|255545528|ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis] gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13, putative [Ricinus communis] Length = 290 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G ++ I + L++ + +L E E+I +R + Sbjct: 169 ARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSM-ENKITKELSEEELITLRDEVS 227 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 228 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKK 286 Query: 122 R 122 + Sbjct: 287 K 287 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL +I GIG + + I L++ +R L E+ +R + + Sbjct: 37 RVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSL-ENKRTKDLTGLELHTLRNEVSK 95 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Y + +L R V +I+RL D+ CYRG H LP RGQ T TNARTRK Sbjct: 96 -YLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRKGMR 146 >gi|255627531|gb|ACU14110.1| unknown [Glycine max] Length = 162 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 R+ GV IP KR+ +L +IHG+G ++ I + + + +L E E+I +R + Sbjct: 43 VRVGGVEIPNNKRIEYSLQHIHGVGRTRAKQILCDIQMD-NKITKELTEEELITLRDEVS 101 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NIKRL D+ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 102 K-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAITGKK 160 Query: 122 R 122 + Sbjct: 161 K 161 >gi|308072481|dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis] Length = 150 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 51/114 (44%), Positives = 75/114 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G + ++V AL I GIG K + +C +L I +V++L + ++ QI Q I Sbjct: 1 MSYILGARLVPNEQVRIALTKIDGIGPKKATRVCYRLGISDNIKVNELTKYQIDQIEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +KFG Sbjct: 61 GQDHVVHWELKRGKRADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKFG 114 >gi|11467125|ref|NP_054426.1| ribosomal protein S13 [Marchantia polymorpha] gi|417736|sp|P26872|RT13_MARPO RecName: Full=Ribosomal protein S13, mitochondrial gi|250828|gb|AAB22420.1| ribosomal protein S13 [Marchantia polymorpha=liverwort, Peptide Mitochondrial, 120 aa] gi|786210|gb|AAC09423.1| rps13 [Marchantia polymorpha] Length = 120 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 50/114 (43%), Positives = 75/114 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ K+V AL I GIG K + +C++L + +V++L + + QI + I Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Q+Y V+ +L+R + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKLR 114 >gi|262186727|ref|YP_003275986.1| ribosomal protein S13 [Pleurozia purpurea] gi|237780724|gb|ACR19370.1| ribosomal protein S13 [Pleurozia purpurea] Length = 120 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 50/114 (43%), Positives = 74/114 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ K+V AL I GIG K + +C++L + +V++L + + QI + I Sbjct: 1 MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDRLGLSDNIKVNKLTKYQFDQIIEII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Q+Y V+ +L R + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDSELERVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTSRKLR 114 >gi|15829034|ref|NP_326394.1| 30S ribosomal protein S13 [Mycoplasma pulmonis UAB CTIP] gi|32363385|sp|Q98Q06|RS13_MYCPU RecName: Full=30S ribosomal protein S13 gi|14089978|emb|CAC13736.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma pulmonis] Length = 132 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 62/131 (47%), Positives = 78/131 (59%), Gaps = 11/131 (8%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA----------IPPERRVHQLVE 50 MARI + IP KRVV +L YI GIG S++I K + RV L E Sbjct: 1 MARILNIEIPSNKRVVISLTYILGIGKSLSKEIIVKANEKLAKAKEKTFTEDSRVKDLSE 60 Query: 51 SEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 ++ IR + + Y EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T NARTR Sbjct: 61 EQLQAIRDS-AKTYLTEGDLRREVSLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTR 119 Query: 111 KKFGKGGVARK 121 K K +K Sbjct: 120 KGPRKTVAGKK 130 >gi|261749448|ref|YP_003257134.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497541|gb|ACX83991.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 126 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 49/121 (40%), Positives = 77/121 (63%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+GV++P++KR + L Y++GI S+ I + + I +V + ++ IR+ I Sbjct: 3 VRISGVDLPKSKRGIIGLTYLYGISKSLSKKILSSVGIDENMKVMDWSDEKISNIRKYIS 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++EG+LR + ++IKRLMD+GCYRG RHR+ LP+RGQ+T N RTRK K +K Sbjct: 63 NHVKIEGELRSEIQLSIKRLMDIGCYRGTRHRKRLPLRGQKTKNNCRTRKGRKKTVANKK 122 Query: 122 R 122 + Sbjct: 123 K 123 >gi|84515658|ref|ZP_01003019.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53] gi|84510100|gb|EAQ06556.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53] Length = 104 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 60/103 (58%), Positives = 72/103 (69%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIK 79 YI GIG ++ IC I RRV+ L ++E++ IR+ I+ + VEGDLRR MNIK Sbjct: 2 TYITGIGPAIAEQICEATNIDRARRVNDLSDAEILTIREFIDANLTVEGDLRRETQMNIK 61 Query: 80 RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 RLMDLGCYRGLRHRR LPVRGQRTHTNARTRK K +K+ Sbjct: 62 RLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKKK 104 >gi|219559528|ref|ZP_03538604.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T17] gi|289571694|ref|ZP_06451921.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17] gi|289545448|gb|EFD49096.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17] Length = 110 Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 52/108 (48%), Positives = 70/108 (64%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI GIG S +I I + R L E ++I +R IE + +VEGDLRR V Sbjct: 1 MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK + +K+ Sbjct: 61 QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKK 108 >gi|295698629|ref|YP_003603284.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA] gi|291157451|gb|ADD79896.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA] Length = 119 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 2/118 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV+I K + A+ I+GIG K S+ IC + I P ++ L E EV ++R+ I Sbjct: 1 MVRIAGVHISENKHIWVAIQSIYGIGKKRSRSICFRTGIEPTSKISFLSEEEVDRLRKEI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG-LPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR ++IKRL+DLGCYRG+RH+ G LPVRGQRT TNARTRK K Sbjct: 61 SR-YVVEGDLRREKNLSIKRLIDLGCYRGIRHKHGSLPVRGQRTKTNARTRKGPRKPI 117 >gi|315320584|ref|YP_004072641.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005] gi|283569057|gb|ADB27594.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005] Length = 123 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G+++P+ KR+ AL YIHGIG S++ I I PE R +++ + + +R + Sbjct: 1 MVRLLGIDLPKNKRIEYALTYIHGIGLTSAKKIVKLAEINPETRTNEITVEQSVALRNIL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E + ++EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ENFELKLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|145344575|ref|XP_001416805.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus lucimarinus CCE9901] gi|144577031|gb|ABO95098.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus lucimarinus CCE9901] Length = 119 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+AGV IP KR AL Y++GIG S++ I + +R+ + E E+ Q+R+ +E Sbjct: 1 ARVAGVEIPNNKRCETALTYVYGIGETSAKAIMAATGL-ENKRLREFSEQELTQLREEVE 59 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + YQ+EG+LRR + MNIKRL ++ C+RG H R LPVRGQRT TNARTRK K +K Sbjct: 60 K-YQIEGELRRFITMNIKRLKEIQCHRGKMHIRNLPVRGQRTKTNARTRKGKVKTVAGKK 118 Query: 122 R 122 + Sbjct: 119 K 119 >gi|254430942|ref|ZP_05044645.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001] gi|197625395|gb|EDY37954.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001] Length = 121 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL Y++GIG +Q I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRVEIALTYVYGIGLTRAQKILAKTGVDPDTRVKDLSDADVQKLRGA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EGDLRR M +KRL D+GC RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 60 AETFTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|262341035|ref|YP_003283890.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272372|gb|ACY40280.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 126 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 76/111 (68%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+GV++PR+KR + L Y++GIG S+ I + + I +++ + ++ ++R+ I Sbjct: 3 VRISGVDLPRSKRGIIGLTYLYGIGKSLSKIILHSVGIDENKKIENWSDDDISKVRKYIS 62 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + ++EG+LR + N+KRLMD+GCY G RHR+GLP+RGQ+T N RTRK Sbjct: 63 NNIKIEGELRSEIQFNVKRLMDIGCYVGTRHRKGLPLRGQKTKNNCRTRKG 113 >gi|11465761|ref|NP_053905.1| ribosomal protein S13 [Porphyra purpurea] gi|1710693|sp|P51295|RR13_PORPU RecName: Full=30S ribosomal protein S13, chloroplastic gi|1276761|gb|AAC08181.1| 30S ribosomal protein S13 [Porphyra purpurea] Length = 126 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 85/122 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ AL YI+GIG S++I K I + R L + +++ IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILKKTNIDADIRCQNLNDQQIVSIREIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E YQ+EGDL+R +M+IKRLM++ YRG RHR GLP+RGQRT TNARTR+ K + Sbjct: 61 ESSYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRTNARTRRGGKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|300870625|ref|YP_003785496.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000] gi|300688324|gb|ADK30995.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000] Length = 129 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 70/114 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV I KR+ AL I+GIG + IC+K I + L ++++ +R AI Sbjct: 1 MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E +VEGDLR + NIKRL D+ YRG+RH + LPVRGQRT TN+R + G Sbjct: 61 EATTKVEGDLRTELFNNIKRLKDIHSYRGMRHIKRLPVRGQRTRTNSRNARGGG 114 >gi|116784057|gb|ABK23197.1| unknown [Picea sitchensis] gi|148906984|gb|ABR16636.1| unknown [Picea sitchensis] gi|224284072|gb|ACN39773.1| unknown [Picea sitchensis] Length = 169 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP K++ +L YIHGIG +++ + L + + +L ESE+ ++R + Sbjct: 48 ARVGGVEIPNNKKIEYSLQYIHGIGRTTARQVLYDLGM-ENKVTRELNESELTRVRDEVS 106 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR + I+RL+++ CYRG RH GLP RGQRT N RT K +K Sbjct: 107 K-YMIEGDLRRFNNLAIRRLIEIQCYRGRRHVAGLPCRGQRTKNNCRTLKGKRVSIAGKK 165 Query: 122 R 122 + Sbjct: 166 K 166 >gi|32491314|ref|NP_871568.1| 30S ribosomal protein S13 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|32363313|sp|Q8D1Z0|RS13_WIGBR RecName: Full=30S ribosomal protein S13 gi|25166521|dbj|BAC24711.1| rpsM [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 118 Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGVNIP K +V AL I+GIG ++ IC K I ++V+ L SE+ IR + Sbjct: 1 MTRIAGVNIPEKKHIVIALKKIYGIGNVLARKICKKTGINFSKKVNSLDSSEIELIRNEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + ++EGDLRR + +NIKRL+DLG YRGLRH++ LPVRGQRT TNARTRK K Sbjct: 61 LK-LKIEGDLRREMTLNIKRLIDLGTYRGLRHKKHLPVRGQRTKTNARTRKGPRKPI 116 >gi|225630280|ref|YP_002727071.1| ribosomal protein S13 [Wolbachia sp. wRi] gi|225592261|gb|ACN95280.1| ribosomal protein S13 [Wolbachia sp. wRi] Length = 112 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 55/111 (49%), Positives = 79/111 (71%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 K V AL YI+GIG ++ IC+ + +RV +L + ++ +I I Q+Y +EG+LR Sbjct: 2 RKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFIRQNYVIEGELR 61 Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK + +A K+ Sbjct: 62 KEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAGKK 112 >gi|240047281|ref|YP_002960669.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae HRC/581] gi|239984853|emb|CAT04843.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae] Length = 137 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 14/134 (10%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47 MARI + IP KR+V AL I+GIG + +I K I + +V Sbjct: 1 MARILNIEIPNNKRIVIALTSIYGIGRSLASEIVAKTQLVQKEKFANQYPLITEDTKVKD 60 Query: 48 LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 L E + IR I ++Y+ EGDLRR+V +IKRL+++ CYRG+RHR+GLPVRGQ T NA Sbjct: 61 LNEDILHIIRD-IAKEYKTEGDLRRSVQTDIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119 Query: 108 RTRKKFGKGGVARK 121 RTRK K + +K Sbjct: 120 RTRKGPRKTIMGKK 133 >gi|171914056|ref|ZP_02929526.1| 30S ribosomal protein S13 [Verrucomicrobium spinosum DSM 4136] Length = 131 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV IP KR+ +L YI+GIG ++ I + I P R +L + ++ +I + + Sbjct: 1 MARLLGVEIPNEKRIEASLPYIYGIGPSLTRKILAETGIDPNIRAGELSDEQLAEISRIV 60 Query: 61 -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + VEGDLRR + ++KRL + CYR RHRRGLPVRGQRT TN+RTRK K Sbjct: 61 AAKGIVVEGDLRRELGAHMKRLTSINCYRATRHRRGLPVRGQRTKTNSRTRKGKRKTV 118 >gi|168054034|ref|XP_001779438.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669123|gb|EDQ55716.1| predicted protein [Physcomitrella patens subsp. patens] Length = 141 Score = 146 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KRV AL YIHG+G +S+ I + + + +L E E+ +R + Sbjct: 19 ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQILLDVGL-ENKITKELSEEELTSLRDEVS 77 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR + IKRL D+ CYRG RH GLP RGQ T NARTR+ +K Sbjct: 78 K-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRRGKKVTIAGKK 136 Query: 122 R 122 + Sbjct: 137 K 137 >gi|318042543|ref|ZP_07974499.1| 30S ribosomal protein S13 [Synechococcus sp. CB0101] Length = 121 Score = 146 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL Y++GIG ++Q I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDADVQKLRGA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + Y +EGDLRR M +KRL D+GC RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 60 AESYTLEGDLRRQEGMAMKRLQDIGCVRGRRHRAGLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|91208878|ref|YP_539039.1| ribosomal protein S13 [Physcomitrella patens] gi|90991418|dbj|BAE93110.1| ribosomal protein S13 [Physcomitrella patens] gi|328775215|gb|AEB40003.1| ribosomal protein S13 [Funaria hygrometrica] Length = 122 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 47/114 (41%), Positives = 75/114 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N+ ++V AL I G+G K + +C++L + +V++L + ++ +I + I Sbjct: 1 MSYILGTNLVPNEQVEIALTRIFGLGPKKAIQVCDQLGLNDNIKVNKLTKYQIDRIIKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Q+Y V+ +L R + +IK+LM +GCYRG RH GLP+RGQRTHTNA+T +K Sbjct: 61 SQNYLVDLELARVIQRDIKQLMSIGCYRGFRHNAGLPLRGQRTHTNAKTCRKVR 114 >gi|194477037|ref|YP_002049216.1| 30S ribosomal protein S13 [Paulinella chromatophora] gi|171192044|gb|ACB43006.1| 30S ribosomal protein S13 [Paulinella chromatophora] Length = 121 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+GIG ++Q I K + P+ RV L +SEV+ +R Sbjct: 1 MARIAGIDIPRDKRVEIALTYIYGIGLTTAQKILAKTGVNPDTRVKDLEDSEVLSLRNTT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 ET-YTIEGDLRRQEGMALKRLQDIGCTRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|296126888|ref|YP_003634140.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563] gi|296018704|gb|ADG71941.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563] Length = 129 Score = 146 bits (370), Expect = 8e-34, Method: Composition-based stats. Identities = 51/114 (44%), Positives = 69/114 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV I KR+ AL I+GIG + IC+K I + L ++++ +R AI Sbjct: 1 MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E +VEGDLR + NIKRL D+ YRG+RH + LPV GQRT TN+R + G Sbjct: 61 EATTKVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARGGG 114 >gi|148243236|ref|YP_001228393.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307] gi|158706291|sp|A5GVY1|RS13_SYNR3 RecName: Full=30S ribosomal protein S13 gi|147851546|emb|CAK29040.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307] Length = 121 Score = 146 bits (370), Expect = 9e-34, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+GV+IPR KRV AL YI+G+G SQ I + P+ RV L +++V ++R A Sbjct: 1 MARISGVDIPREKRVEIALTYIYGVGLTRSQKILASTGVSPDTRVKDLSDADVQKLRAA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + +EGDLRR M +KRL D+GC RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 60 AETFTLEGDLRRQEGMAMKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|168054032|ref|XP_001779437.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669122|gb|EDQ55715.1| predicted protein [Physcomitrella patens subsp. patens] Length = 128 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KRV AL YIHG+G +S+ I + + + +L E E+ +R + Sbjct: 6 ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQILLDVGL-ENKITKELSEEELTSLRDEVS 64 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR + IKRL D+ CYRG RH GLP RGQ T NARTR+ +K Sbjct: 65 K-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRRGKKVTIAGKK 123 Query: 122 R 122 + Sbjct: 124 K 124 >gi|317968837|ref|ZP_07970227.1| 30S ribosomal protein S13 [Synechococcus sp. CB0205] Length = 121 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL Y++GIG ++Q I K + P+ RV L +S+V ++R A Sbjct: 1 MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y +EGDLRR M +KRL D+GC RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 61 ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRVGLPVRGQRTRTNARTRRGSRKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116515237|ref|YP_802866.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285367|sp|Q057C6|RS13_BUCCC RecName: Full=30S ribosomal protein S13 gi|58384670|gb|AAW72685.1| 30S ribosomal protein S13 [Buchnera aphidicola (Cinara cedri)] gi|116257091|gb|ABJ90773.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 119 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG+NI K ++ AL I+GIG S+ IC + I + +++ L + ++ +R I Sbjct: 1 MTRIAGINISDKKHILVALTSIYGIGISLSKKICFSIGIRCDVKINSLTKEKIESLRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + + VEGDLRR +NIKRLMD+GCYRGLRHR+ LPVRGQRT TNARTRK K +R Sbjct: 61 SK-FLVEGDLRREKTINIKRLMDIGCYRGLRHRKHLPVRGQRTKTNARTRKGPRKLIKSR 119 >gi|187251797|ref|YP_001876279.1| 30S ribosomal protein S13 [Elusimicrobium minutum Pei191] gi|226712735|sp|B2KEJ6|RS13_ELUMP RecName: Full=30S ribosomal protein S13 gi|186971957|gb|ACC98942.1| Ribosomal protein S13 [Elusimicrobium minutum Pei191] Length = 124 Score = 145 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 2/124 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA--IPPERRVHQLVESEVIQIRQ 58 MAR+AG+++P+ KR+ AL YI+GIG ++++D+ K I P RV L E++ + Sbjct: 1 MARVAGIDLPKNKRIDVALEYIYGIGKRNAKDVIAKANGQIDPTTRVKDLTEAQANLLNT 60 Query: 59 AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 ++++Y+VEG+LRR ++ NI+R +D G YRG RHR+ LPVRGQRT TN+RTRK + Sbjct: 61 ILQKEYKVEGELRREISGNIQRYVDTGSYRGNRHRKRLPVRGQRTKTNSRTRKGKRRTVG 120 Query: 119 ARKR 122 ++ + Sbjct: 121 SKTK 124 >gi|162279916|ref|NP_064014.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|323435141|ref|YP_004222359.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|87248054|gb|ABD36081.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|148491419|dbj|BAA99325.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|317905591|emb|CBJ14001.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|319439874|emb|CBJ17577.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] gi|320148028|emb|CBJ20692.1| ribosomal protein S13 [Beta vulgaris subsp. maritima] Length = 116 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIALTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116 >gi|316996011|dbj|BAD83467.2| ribosomal protein S13 [Nicotiana tabacum] Length = 116 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 73/115 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K + Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIR 115 >gi|11467736|ref|NP_050788.1| ribosomal protein S13 [Guillardia theta] gi|3914830|sp|O46912|RR13_GUITH RecName: Full=30S ribosomal protein S13, chloroplastic gi|3603061|gb|AAC35722.1| ribosomal protein S13 [Guillardia theta] Length = 122 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 83/122 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR+ AL YI+G+G SSQ I K I +R L ++EV IR I Sbjct: 1 MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCKDLDDNEVSLIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++Y VEG +R +MNIKRLM++ C RG RHR GLP+RGQRT TNARTR+ K + Sbjct: 61 DENYPVEGAAKRVESMNIKRLMEINCIRGKRHRVGLPLRGQRTRTNARTRRGAKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|149072028|ref|YP_001293599.1| ribosomal protein S13 [Rhodomonas salina] gi|158706197|sp|A6MW20|RR13_RHDSA RecName: Full=30S ribosomal protein S13, chloroplastic gi|134302979|gb|ABO70783.1| ribosomal protein S13 [Rhodomonas salina] Length = 123 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 61/122 (50%), Positives = 80/122 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SSQ I + R L + ++ +IRQ I Sbjct: 1 MARIAGVDLPRNKRIEIGLTYIYGIGLTSSQSILKVATVDSNIRCKDLTDEDISKIRQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++DY VEG RR M+IKRLM++ C +G RHR GLP+RGQRT TNARTR+ K + Sbjct: 61 DEDYLVEGVARRIETMSIKRLMEINCVKGRRHRDGLPLRGQRTRTNARTRRGSKKTVAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|27904920|ref|NP_778046.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32363301|sp|Q89A87|RS13_BUCBP RecName: Full=30S ribosomal protein S13 gi|27904318|gb|AAO27151.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 118 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 59/115 (51%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NI K VV AL ++GIG S+ IC + I ++ L + ++ +R + Sbjct: 1 MARIAGINIANHKHVVVALMDVYGIGKTRSKLICLRTNISESIKILDLTKDQLELLRCEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + + VEGDLRR V ++IKRL DL CYRG RHR+ LPVRGQRT TNARTRK K Sbjct: 61 LK-FVVEGDLRREVTLSIKRLQDLNCYRGSRHRKKLPVRGQRTKTNARTRKGPRK 114 >gi|94502227|ref|ZP_01308713.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833839|ref|YP_001598035.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS] gi|189044303|sp|A8Z688|RS13_SULMW RecName: Full=30S ribosomal protein S13 gi|94451198|gb|EAT14137.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206329|gb|ABS30639.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS] Length = 126 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA ++G+ IP K + AL YI GIG +S+ I I +V + ++ +IR+ I Sbjct: 1 MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVINWSDEDINKIRKYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + ++EG+LR + ++IKR++++GCYRG+RHR GLPVRGQ+T N RTRK Sbjct: 61 SSNIRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRKG 112 >gi|87300892|ref|ZP_01083734.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701] gi|87284763|gb|EAQ76715.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701] Length = 121 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L Y++GIG +Q I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEISLTYVYGIGLSRAQKILTKAGVNPDIRVKDLDDGDVQKLRAAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR GLPVRGQRT TNARTR+ K + Sbjct: 61 ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|297180258|gb|ADI16477.1| hypothetical protein [uncultured bacterium HF4000_05M23] Length = 127 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA IAGVNIP +R+ AL I+GIG +S+ I + + RV L + ++ ++R A+ Sbjct: 1 MAIIAGVNIPDNQRLEIALTAIYGIGRTTSKKIVGDVGMGDTTRVRDLTDEDLARVRSAV 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ +EGDLRR +NI+RL D+ +RG+RHRRGLPVRGQRT TNART++ + Sbjct: 61 ERTGLLIEGDLRRETQLNIRRLTDIQTFRGVRHRRGLPVRGQRTKTNARTKRGRRQTVAG 120 Query: 120 RKR 122 RKR Sbjct: 121 RKR 123 >gi|11830847|emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana] Length = 116 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|255022693|ref|ZP_05294679.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-208] Length = 111 Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 49/104 (47%), Positives = 73/104 (70%), Gaps = 1/104 (0%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 L YI+GIG ++++++ + + + R L E E+ +IR+ +++ +VEGDLRR V +NI Sbjct: 9 LTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDR-IKVEGDLRREVNLNI 67 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 KRL+++G YRG+RHRRGLPVRGQ T NARTRK K +K+ Sbjct: 68 KRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK 111 >gi|118411210|ref|YP_874604.1| 30S ribosomal protein S13 [Thalassiosira pseudonana] gi|125987679|sp|A0T0Z2|RR13_THAPS RecName: Full=30S ribosomal protein S13, chloroplastic gi|116739957|gb|ABK20827.1| 30S ribosomal protein S13 [Thalassiosira pseudonana] Length = 123 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ G+++PR KR+ AL YIHGIG S+Q I + R + + + +R + Sbjct: 1 MVRLLGIDLPRNKRIAYALTYIHGIGLTSAQKFIELAEISADTRTDDITTEQAVVLRNLL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E + +EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNAR+R+ K Sbjct: 61 ENCELNLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|134059|sp|P23209|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial Length = 116 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 72/112 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL ++GIG K + +C +L I ++ +L + ++ Q+ Q I Sbjct: 1 MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|256370800|ref|YP_003108625.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri SMDSEM] gi|256009592|gb|ACU52952.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri SMDSEM] Length = 134 Score = 143 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 53/110 (48%), Positives = 75/110 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA I+G+ IP+ KR + AL YI GIG +S+ I N I ++V ++E+ +IR+ I Sbjct: 1 MAIISGIEIPKNKRGLIALTYIFGIGISTSKKIFNNTGIDKNKKVSNWTDNEIKKIRKFI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + EG+LR + ++IKR+MD+GCYRG+RHR GLPVRGQ+T N RTR Sbjct: 61 SDKIKTEGELRLEIQLDIKRIMDIGCYRGIRHRLGLPVRGQKTKKNCRTR 110 >gi|290512090|ref|ZP_06551458.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp. 1_1_55] gi|289775880|gb|EFD83880.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp. 1_1_55] Length = 106 Score = 143 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72 K V AL I GIG S+ IC + I ++ +L E ++ +R+A+ + + VEGDLRR Sbjct: 1 KHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAVGK-FVVEGDLRR 59 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 60 EITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 104 >gi|229328281|ref|YP_002860257.1| ribosomal protein S13 [Megaceros aenigmaticus] gi|192282181|gb|ACF03810.1| ribosomal protein S13 [Nothoceros aenigmaticus] Length = 122 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 73/113 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N K++ AL I GIG K + +C +L + RV++L ++ +I + I Sbjct: 1 MSYILGTNSISNKQIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKILKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L+ + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T ++F Sbjct: 61 SQNYLVDSELKAVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113 >gi|194033240|ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|60498746|dbj|BAC19882.2| Ribosomal protein S13 [Oryza sativa Japonica Group] Length = 116 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 73/115 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K + Sbjct: 61 AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARKLIR 115 >gi|237728633|ref|ZP_04559114.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2] gi|226909255|gb|EEH95173.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2] Length = 103 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 1/102 (0%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 + AL I+G+G S+ I I + ++ +L E ++ +R + + + VEGDLRR V+ Sbjct: 1 MIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEVAK-FVVEGDLRREVS 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 60 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101 >gi|215447798|ref|ZP_03434550.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] gi|289759623|ref|ZP_06519001.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] gi|289715187|gb|EFD79199.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85] Length = 100 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 50/100 (50%), Positives = 68/100 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ GV++PR KR+ AL YI GIG S +I I + R L E ++I +R I Sbjct: 1 MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + +VEGDLRR V +I+R +++GCY+GLRHRRG+PVRG Sbjct: 61 EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRG 100 >gi|169635170|gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2 [Arachis diogoi] Length = 121 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I +++ + L E E+I +R + Sbjct: 2 ARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMD-NKVTKDLSEEELITLRDEVS 60 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + Y +EGDLRR A+NI+RL ++ CYRG+RH +GLP RGQRT N RT K +K Sbjct: 61 K-YVIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKK 119 Query: 122 R 122 + Sbjct: 120 K 120 >gi|156743924|ref|YP_001434053.1| 30S ribosomal protein S13 [Roseiflexus castenholzii DSM 13941] gi|189044291|sp|A7NR39|RS13_ROSCS RecName: Full=30S ribosomal protein S13 gi|156235252|gb|ABU60035.1| ribosomal protein S13 [Roseiflexus castenholzii DSM 13941] Length = 127 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 59/100 (59%), Positives = 75/100 (75%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR K + A+ YI GIG + D+ K + P RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRNKTIEIAITYIFGIGRSNGADVLRKANVNPATRVRDLTEEEVSRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+GLPVRG Sbjct: 61 EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGLPVRG 100 >gi|78211907|ref|YP_380686.1| 30S ribosomal protein S13 [Synechococcus sp. CC9605] gi|123578843|sp|Q3AMQ1|RS13_SYNSC RecName: Full=30S ribosomal protein S13 gi|78196366|gb|ABB34131.1| ribosomal protein S13 [Synechococcus sp. CC9605] Length = 121 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ +L YI+G+G SQ I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRGAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 E-NYTVEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|225621049|ref|YP_002722307.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1] gi|225215869|gb|ACN84603.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1] Length = 125 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 2/120 (1%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 GV I KR+ AL I+GIG + IC+K I + L ++++ +R AIE Sbjct: 1 MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATT 60 Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG--KGGVARKR 122 +VEGDLR + NIKRL D+ YRG+RH + LPV GQRT TN+R + G K +K+ Sbjct: 61 KVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARGGGARKAIAGKKK 120 >gi|54606697|dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] gi|54606741|dbj|BAD66764.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] Length = 116 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V A I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116 >gi|260435148|ref|ZP_05789118.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109] gi|260413022|gb|EEX06318.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109] Length = 121 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ +L YI+G+G SQ I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRNAM 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ Y +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EE-YTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|159792882|gb|ABW98661.1| ribosomal protein S13 [Malus x domestica] Length = 116 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|123966952|ref|YP_001012033.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515] gi|158706262|sp|A2BYR5|RS13_PROM5 RecName: Full=30S ribosomal protein S13 gi|123201318|gb|ABM72926.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515] Length = 121 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+GIG S+ I + + P+ RV L +S+V ++R Sbjct: 1 MARIAGIDIPREKRVEIALTYIYGIGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLR-VA 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +D+ VEGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 60 AEDFTVEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|24636948|gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna] Length = 116 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|242624285|ref|YP_003002203.1| 30S ribosomal protein S13 [Aureoumbra lagunensis] gi|239997393|gb|ACS36915.1| 30S ribosomal protein S13 [Aureoumbra lagunensis] Length = 116 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 65/101 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P +KRV AL I+GIG SS+ I I P +R+H L + E+ +R I Sbjct: 1 MVRIAGVDLPNSKRVEYALTSIYGIGLTSSRSILAAANIDPNKRMHTLEDQELSVLRAVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E +Y+VE DLRR + NI RL + C RG RHR LPVRGQ Sbjct: 61 EDNYKVEDDLRRLIKQNIVRLSQINCVRGRRHRASLPVRGQ 101 >gi|87124984|ref|ZP_01080831.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917] gi|86167304|gb|EAQ68564.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917] Length = 121 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGPTRARTILSKTGVNPDIRVKDLDDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E Y +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-YTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|302763467|ref|XP_002965155.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii] gi|300167388|gb|EFJ33993.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii] Length = 166 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G +++ I A+ +R L ++E+ +IR + Sbjct: 44 ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 102 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + Y +EGDLRR + I L+++ CYRG RH+ GLPVRGQRT NARTR Sbjct: 103 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 150 >gi|159904198|ref|YP_001551542.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211] gi|226712777|sp|A9BCM6|RS13_PROM4 RecName: Full=30S ribosomal protein S13 gi|159889374|gb|ABX09588.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211] Length = 121 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+G+G ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGIDIPREKRVEVALTYIYGVGLTRAKSILAKAGVNPDIRVKDLDDGDVQKLRTAV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 ES-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|161616444|ref|YP_001590409.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365808|gb|ABX69576.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|321226469|gb|EFX51519.1| SSU ribosomal protein S13p S18e [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 103 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 + AL I+G+G S+ I I ++ +L E ++ +R + + + VEGDLRR ++ Sbjct: 1 MIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREIS 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 60 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101 >gi|284794742|ref|YP_003412095.1| ribosomal protein S13 [Phaeoceros laevis] gi|254596062|gb|ACT75303.1| ribosomal protein S13 [Phaeoceros laevis] Length = 122 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 48/113 (42%), Positives = 72/113 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G N K + AL I GIG K + +C +L + RV++L ++ +I + I Sbjct: 1 MSYILGTNSISNKLIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKIIKII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 Q+Y V+ +L+ + +IKRL+ +GCYRG RH GLP+RGQRTHTNA+T ++F Sbjct: 61 SQNYLVDSELKTVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113 >gi|116072179|ref|ZP_01469447.1| 30S ribosomal protein S13 [Synechococcus sp. BL107] gi|116065802|gb|EAU71560.1| 30S ribosomal protein S13 [Synechococcus sp. BL107] Length = 121 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG ++ I K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|116075746|ref|ZP_01473005.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916] gi|116067061|gb|EAU72816.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916] Length = 121 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I ++ + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGPTRARTILSQTGVNPDTRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 E-GFTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|148655313|ref|YP_001275518.1| 30S ribosomal protein S13 [Roseiflexus sp. RS-1] gi|166231922|sp|A5USG5|RS13_ROSS1 RecName: Full=30S ribosomal protein S13 gi|148567423|gb|ABQ89568.1| SSU ribosomal protein S13P [Roseiflexus sp. RS-1] Length = 127 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 60/102 (58%), Positives = 78/102 (76%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ A+ YI GIG + ++ K + P RV L E EV +IR+ + Sbjct: 1 MARIAGVDLPRNKRIEIAITYIFGIGRSNGAEVLRKANVNPATRVRDLTEEEVSRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+G+PVRGQR Sbjct: 61 EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGMPVRGQR 102 >gi|124024017|ref|YP_001018324.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303] gi|158706261|sp|A2CC49|RS13_PROM3 RecName: Full=30S ribosomal protein S13 gi|123964303|gb|ABM79059.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303] Length = 121 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSGVNPDIRVKDLEDGDVQKLRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|254509449|ref|ZP_05121527.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16] gi|219547622|gb|EED24669.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16] Length = 103 Score = 141 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 + AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + + Y VEGDLRR V+ Sbjct: 1 MIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVS 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 60 MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 101 >gi|54020093|ref|YP_115724.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 232] gi|71893522|ref|YP_278968.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J] gi|72080509|ref|YP_287567.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448] gi|81378720|sp|Q601J1|RS13_MYCH2 RecName: Full=30S ribosomal protein S13 gi|123645173|sp|Q4A8J5|RS13_MYCH7 RecName: Full=30S ribosomal protein S13 gi|123645895|sp|Q4AAG4|RS13_MYCHJ RecName: Full=30S ribosomal protein S13 gi|53987266|gb|AAV27467.1| 30s ribosomal protein S13 [Mycoplasma hyopneumoniae 232] gi|71851649|gb|AAZ44257.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J] gi|71913633|gb|AAZ53544.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448] Length = 137 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 14/134 (10%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47 MAR+ V IP KR+V ALC I GIG + +I K A + +V + Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60 Query: 48 LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + E + IR + + Y+ EGDL R V NIKRL+++ CYRG+RHR+GLPVRGQ T NA Sbjct: 61 INEEVLQVIRD-VAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119 Query: 108 RTRKKFGKGGVARK 121 RTRK K +A+K Sbjct: 120 RTRKGPRKTIMAKK 133 >gi|33241140|ref|NP_876082.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663961|sp|Q7V9Y3|RS13_PROMA RecName: Full=30S ribosomal protein S13 gi|33238670|gb|AAQ00735.1| Ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 121 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+++PR KRV AL YI+GIG +Q+I K + P+ RV L + +V ++R A Sbjct: 1 MARIAGIDLPRDKRVEIALTYIYGIGLTRAQNILAKTGVNPDIRVKDLEDGDVQKLRAAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|33866620|ref|NP_898179.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102] gi|81573912|sp|Q7U4H9|RS13_SYNPX RecName: Full=30S ribosomal protein S13 gi|33633398|emb|CAE08603.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102] Length = 121 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+G+G ++ I + + P+ RV L + ++ ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGVGPTRARTILAQTGVSPDIRVKDLEDGDLQKLRNA- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 D+ +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 60 ADDFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|148238749|ref|YP_001224136.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803] gi|158706290|sp|A5GIS4|RS13_SYNPW RecName: Full=30S ribosomal protein S13 gi|147847288|emb|CAK22839.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803] Length = 121 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG +Q I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGLTRAQTILSKTGVNPDTRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|295311659|ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi|259156787|gb|ACV96649.1| ribosomal protein S13 [Citrullus lanatus] Length = 116 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G K+V AL I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|24636950|gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata] Length = 116 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++ ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGASLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|113953764|ref|YP_729646.1| 30S ribosomal protein S13 [Synechococcus sp. CC9311] gi|123031877|sp|Q0ID26|RS13_SYNS3 RecName: Full=30S ribosomal protein S13 gi|113881115|gb|ABI46073.1| ribosomal protein S13 [Synechococcus sp. CC9311] Length = 121 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I K + P+ RV L +++V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGSTRAKTILTKAGVNPDIRVKDLEDNDVQKLRNAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|78185543|ref|YP_377977.1| 30S ribosomal protein S13 [Synechococcus sp. CC9902] gi|123581060|sp|Q3AW72|RS13_SYNS9 RecName: Full=30S ribosomal protein S13 gi|78169837|gb|ABB26934.1| SSU ribosomal protein S13P [Synechococcus sp. CC9902] Length = 121 Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV +L YI+GIG ++ I K + P+ RV L + ++ ++R A Sbjct: 1 MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDIQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|19075537|ref|NP_588037.1| mitochondrial ribosomal protein subunit S37 (predicted) [Schizosaccharomyces pombe 972h-] gi|74654640|sp|O59772|SWS2_SCHPO RecName: Full=37S ribosomal protein subunit sws2, mitochondrial gi|3080512|emb|CAA18642.1| mitochondrial ribosomal protein subunit S37 (predicted) [Schizosaccharomyces pombe] Length = 151 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV + K V AL +GIG +++IC KL+ RV +L ++ + Q + Sbjct: 1 MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +EGDLRR +I RL+++ CYRG+RH GLPV GQ T TNA+T KK K Sbjct: 61 S-GMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNK 114 >gi|24636952|gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus] Length = 116 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 47/112 (41%), Positives = 72/112 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V + RR +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWEWRRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|94502651|ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays] gi|40795090|gb|AAR91134.1| ribosomal protein S13 [Zea mays] Length = 116 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V AL + GIG K + +C +L I ++H+L + ++ QI Q I Sbjct: 1 MLYISGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARK 112 >gi|295311703|ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo] gi|259156831|gb|ACV96692.1| ribosomal protein S13 [Cucurbita pepo] Length = 116 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 50/112 (44%), Positives = 73/112 (65%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL I GIG K + +C +L I ++ +L +S++ QI Q I Sbjct: 1 MPYISGARLVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R++ L CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHIVHWELKRGERADIERVISLSCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|72382946|ref|YP_292301.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL2A] gi|91207715|sp|Q46IT0|RS13_PROMT RecName: Full=30S ribosomal protein S13 gi|72002796|gb|AAZ58598.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. NATL2A] Length = 121 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G++IPR KRV AL YI+GIG +Q I K + P+ RV L +S++ ++R A+ Sbjct: 1 MARISGIDIPREKRVEVALTYIYGIGLTRAQSILEKSGVNPDIRVKDLEDSDIQKLR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 60 TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|163847947|ref|YP_001635991.1| 30S ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl] gi|222525827|ref|YP_002570298.1| 30S ribosomal protein S13 [Chloroflexus sp. Y-400-fl] gi|189040495|sp|A9WH90|RS13_CHLAA RecName: Full=30S ribosomal protein S13 gi|254811139|sp|B9LJF6|RS13_CHLSY RecName: Full=30S ribosomal protein S13 gi|163669236|gb|ABY35602.1| ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl] gi|222449706|gb|ACM53972.1| ribosomal protein S13 [Chloroflexus sp. Y-400-fl] Length = 127 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 63/102 (61%), Positives = 81/102 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ A+ YI+GIG + +I K + PERRV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102 >gi|302757637|ref|XP_002962242.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii] gi|300170901|gb|EFJ37502.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii] Length = 163 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHG+G +++ I A+ +R L ++E+ +IR + Sbjct: 41 ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 99 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + Y +EGDLRR + I L+++ CYRG RH+ GLPVRGQRT NARTR Sbjct: 100 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 147 >gi|300782635|ref|YP_003762926.1| 30S ribosomal protein S13 [Amycolatopsis mediterranei U32] gi|299792149|gb|ADJ42524.1| small subunit ribosomal protein S13 [Amycolatopsis mediterranei U32] Length = 112 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 49/103 (47%), Positives = 69/103 (66%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + AL YI+GIG S+ + + + RV L + ++ ++R IE++++VEGDLRR V Sbjct: 1 MEIALTYIYGIGRTRSKQLIKAAELNADTRVKDLSDDDLAKLRVYIEENFKVEGDLRREV 60 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 +I+R +++GCY GLR RRGLPVRGQRT TNARTRK K Sbjct: 61 NADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRKGPKKTV 103 >gi|18417346|ref|NP_568299.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis thaliana] gi|1173194|sp|P42732|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] gi|662869|emb|CAA88028.1| chloroplast ribosomal protein S13 [Arabidopsis thaliana] gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13 [Arabidopsis thaliana] gi|1515107|emb|CAA60413.1| plastid ribosomal protein S13 [Arabidopsis thaliana] gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110 [Arabidopsis thaliana] gi|15450549|gb|AAK96452.1| AT5g14320/F18O22_110 [Arabidopsis thaliana] gi|332004633|gb|AED92016.1| 30S ribosomal protein S13 [Arabidopsis thaliana] Length = 169 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I L + + + E E+I +R + Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + Y +EGDLRR A+ IKRL ++ CYRG+RH +GLP RGQRT N RT Sbjct: 107 K-YMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153 >gi|33864020|ref|NP_895580.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313] gi|81576938|sp|Q7V525|RS13_PROMM RecName: Full=30S ribosomal protein S13 gi|33635604|emb|CAE21928.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313] Length = 121 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KRV AL YI+GIG ++ I K + P+ RV L + +V ++R A+ Sbjct: 1 MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSDVNPDIRVKDLEDGDVQKLRTAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|219849863|ref|YP_002464296.1| 30S ribosomal protein S13 [Chloroflexus aggregans DSM 9485] gi|254811138|sp|B8G6Q1|RS13_CHLAD RecName: Full=30S ribosomal protein S13 gi|219544122|gb|ACL25860.1| ribosomal protein S13 [Chloroflexus aggregans DSM 9485] Length = 126 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 63/102 (61%), Positives = 80/102 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ A+ YI+GIG + D+ K + P RRV L E EV +IR+ I Sbjct: 1 MARIAGVDIPRNKKIEIAITYIYGIGRSNGMDVLRKANVDPNRRVRDLTEEEVGRIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102 >gi|312601094|gb|ADQ90349.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 168] Length = 137 Score = 140 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 14/134 (10%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47 MAR+ V IP KR+V ALC I GIG + +I K A + +V + Sbjct: 1 MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQKEKFGKKFPILTENTKVKE 60 Query: 48 LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + E + IR + + Y+ EGDL R V NIKRL+++ CYRG+RHR+GLPVRGQ T NA Sbjct: 61 INEEVLQVIRD-VAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119 Query: 108 RTRKKFGKGGVARK 121 RTRK K +A+K Sbjct: 120 RTRKGPRKTIMAKK 133 >gi|296105006|ref|YP_003615152.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059465|gb|ADF64203.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 103 Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 1/102 (0%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 + AL I+GIG S+ I I + ++ +L E ++ +R + + + VEGDLRR ++ Sbjct: 1 MIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREIS 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 60 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101 >gi|309789646|ref|ZP_07684227.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6] gi|308228382|gb|EFO82029.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6] Length = 126 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 61/102 (59%), Positives = 79/102 (77%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR K++ ++ YI GIG + D+ K + PE RV L E EV +IR+ + Sbjct: 1 MARIAGVDIPRNKKIEISIRYIFGIGPSNGLDVLRKANVNPETRVRDLTEEEVGRIREIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR Sbjct: 61 DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102 >gi|33862093|ref|NP_893654.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575584|sp|Q7UZW4|RS13_PROMP RecName: Full=30S ribosomal protein S13 gi|33634311|emb|CAE19996.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 121 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL YI+G+G S+ I + + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYIYGVGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E D+ VEGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 E-DFTVEGDLRRKEGMAMKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|296085211|emb|CBI28706.3| unnamed protein product [Vitis vinifera] Length = 912 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 772 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 831 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 832 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 891 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 892 RGQHTKTTGRRGKTV---GVSKKR 912 >gi|86279741|gb|ABC94524.1| 30S ribosomal protein S13 [Chroomonas mesostigmatica] Length = 101 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 1/101 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++P+ KRV AL YI+GIG +SQ I +K + + R L +S+V+ IR+ I Sbjct: 1 MARIAGVDLPKNKRVEIALTYIYGIGLSTSQSILSKANVSFDVRCKDLEDSDVMTIREII 60 Query: 61 EQDYQVEGDLRRTV-AMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y VEG +R + ++NIKRLM++ C RG RHR GLP+RG Sbjct: 61 DEEYPVEGAAKREIESLNIKRLMEVNCIRGRRHRAGLPLRG 101 >gi|124026688|ref|YP_001015803.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A] gi|158706260|sp|A2C4X9|RS13_PROM1 RecName: Full=30S ribosomal protein S13 gi|123961756|gb|ABM76539.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A] Length = 121 Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G++IPR KRV AL YI+GIG +Q I K + P+ RV L + ++ ++R A+ Sbjct: 1 MARISGIDIPREKRVEVALTYIYGIGLTRAQAILEKSGVNPDIRVKDLDDGDIQKLR-AV 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +++ +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 60 TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|126697067|ref|YP_001091953.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301] gi|157414142|ref|YP_001485008.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215] gi|254526937|ref|ZP_05138989.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202] gi|158706259|sp|A3PF27|RS13_PROM0 RecName: Full=30S ribosomal protein S13 gi|166991601|sp|A8G741|RS13_PROM2 RecName: Full=30S ribosomal protein S13 gi|126544110|gb|ABO18352.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301] gi|157388717|gb|ABV51422.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215] gi|221538361|gb|EEE40814.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202] Length = 121 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|88807906|ref|ZP_01123417.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805] gi|88787945|gb|EAR19101.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805] Length = 121 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV+IPR KR+ AL YI+GIG ++ I +K + P+ RV L + +V ++R A Sbjct: 1 MARIAGVDIPRDKRIEVALTYIYGIGLTRAKTILSKTGVNPDIRVKDLEDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K + Sbjct: 61 EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|78780014|ref|YP_398126.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9312] gi|91207714|sp|Q318K5|RS13_PROM9 RecName: Full=30S ribosomal protein S13 gi|78713513|gb|ABB50690.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. MIT 9312] Length = 121 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L +S+V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANAGVNPDIRVKDLSDSDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|328772175|gb|EGF82214.1| hypothetical protein BATDEDRAFT_10132 [Batrachochytrium dendrobatidis JAM81] Length = 142 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN+P K V AL ++G+G K+ + IC+KL I P+ R+ L ES+V Q+ Q + Sbjct: 1 MLYLLGVNLPDEKLVHIALTSVYGVGRKTGEQICHKLLIHPQCRLKDLPESKVTQLSQLL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 +E +LRR NIK L+D+G YRG+RH+ GLPV GQRT +NA T K+ Sbjct: 61 -NTMTIEAELRRQTEENIKSLVDMGTYRGMRHKAGLPVNGQRTRSNASTAKRLN 113 >gi|194246757|ref|YP_002004396.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali] gi|254811160|sp|B3R015|RS13_PHYMT RecName: Full=30S ribosomal protein S13 gi|193807114|emb|CAP18552.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali] Length = 127 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 67/118 (56%), Positives = 79/118 (66%), Gaps = 2/118 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-IPPERRVHQLVESEVIQIRQA 59 MARIAGV IP KRVV AL YI GIG K +Q+I + L I +V L E +I IR Sbjct: 1 MARIAGVEIPSNKRVVIALTYIRGIGIKKAQNILSDLKEIDINTKVEDLKEQHLIAIRNK 60 Query: 60 IEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 I+ +Y VEGDL+R VA+NIKRLM+ G YRGLRHR+GLP RGQ T NART K + Sbjct: 61 IQNGNYLVEGDLKREVALNIKRLMENGSYRGLRHRKGLPSRGQNTRNNARTIKGKRRT 118 >gi|189095415|ref|YP_001936428.1| ribosomal protein S13 [Heterosigma akashiwo] gi|157694758|gb|ABV66034.1| 30S ribosomal protein S13 [Heterosigma akashiwo] gi|157777989|gb|ABV70175.1| 30S ribosomal protein S13 [Heterosigma akashiwo] Length = 122 Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 54/122 (44%), Positives = 81/122 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAGV++P K+++ +L ++GIG +++ I K + E R +L + V IR + Sbjct: 1 MVRIAGVDLPSQKKILYSLTAVYGIGLHTAKKILEKAKVDSEIRTFELDDDSVGNIRSVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E +Y VEGDLR+ ++NI RL+ + C+RG RHR+GLP+RGQRT TNARTR+ K + Sbjct: 61 EDNYTVEGDLRKLKSLNINRLVSINCFRGKRHRQGLPLRGQRTRTNARTRRGSKKTMAGK 120 Query: 121 KR 122 K+ Sbjct: 121 KK 122 >gi|86279737|gb|ABC94521.1| 30S ribosomal protein S13 [Hanusia phi] Length = 100 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 49/100 (49%), Positives = 69/100 (69%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARI+G+++P+ KR+ AL YI+G+G SSQ I K I +R L ++E+ IR I Sbjct: 1 MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCRDLDDNEISLIRSII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 +++Y VEG +R +MNIKRLM++ C RG RHR GLP+RG Sbjct: 61 DENYPVEGAAKRIESMNIKRLMEINCIRGKRHRLGLPLRG 100 >gi|56791641|gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson 0301] Length = 107 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 43/106 (40%), Positives = 69/106 (65%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G + ++V +L I+GIG K + +C +L I ++ +L + ++ Q+ Q I QD+ Sbjct: 2 GARLVDNEQVRISLTKIYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMIGQDHV 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART + Sbjct: 62 VHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCR 107 >gi|123969277|ref|YP_001010135.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601] gi|158706263|sp|A2BTB7|RS13_PROMS RecName: Full=30S ribosomal protein S13 gi|123199387|gb|ABM71028.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601] Length = 121 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG++IPR KRV AL Y++GIG S+ I + P+ RV L + +V ++R A Sbjct: 1 MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDGDVQKLRGAT 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 E+ + +EGDLRR M +KRL D+GC RG RHR LPVRGQRT TNARTR+ K R Sbjct: 61 EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119 Query: 121 KR 122 K+ Sbjct: 120 KK 121 >gi|321310956|ref|YP_004193285.1| 30S ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1] gi|319802800|emb|CBY93446.1| ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1] Length = 155 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 30/151 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP------------------- 41 M RI GV+IP K + AL I+G+GF +S+ I K Sbjct: 1 MPRILGVDIPNNKTLYAALTSIYGVGFSTSRKIIQKAFFNEIKPLNKLSKKEKGELDKVL 60 Query: 42 ERRVHQLVESEVIQIRQAIEQ-----------DYQVEGDLRRTVAMNIKRLMDLGCYRGL 90 RV L + + I Q I ++ EGDLR+ V+ NIK L+++ CY G+ Sbjct: 61 RMRVKDLTKDNLSTISQTILNLQNNEEKYIYHEFLFEGDLRKKVSDNIKNLVEINCYVGI 120 Query: 91 RHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 RH+RGLPVRGQRT TNARTRK K +K Sbjct: 121 RHKRGLPVRGQRTRTNARTRKGPRKTVANKK 151 >gi|11466521|ref|NP_044770.1| ribosomal protein S13 [Reclinomonas americana] gi|2258351|gb|AAD11885.1| ribosomal protein S13 [Reclinomonas americana] Length = 122 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 76/115 (66%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G+NI K++ AL I+G+G K ++C+ + + P+ ++ L ES++ ++ I Sbjct: 1 MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 E+++ +E +LR+ NIKRL+D+ YRGLRH GLPV GQRTHTNA+T+K K Sbjct: 61 EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115 >gi|326522883|dbj|BAJ88487.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 171 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 2/109 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV AL IHGIG ++ I ++L + + L + E++ +R+ I + Sbjct: 61 RIGGVVIPNDKRVEYALQSIHGIGRARARQILSELNL-ENKVTKDLSKEEIMALREGIAK 119 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y +E DLRR + ++RL + CYRG+RH LPVRGQRT TN RTRK Sbjct: 120 -YMIEADLRRFKSAAVERLEGIRCYRGIRHADALPVRGQRTKTNGRTRK 167 >gi|242620059|ref|YP_003002063.1| 30S ribosomal protein S13 [Aureococcus anophagefferens] gi|239997304|gb|ACS36827.1| 30S ribosomal protein S13 [Aureococcus anophagefferens] Length = 116 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 45/101 (44%), Positives = 68/101 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+G+++P +KR+ AL ++GIG +S+ I I P +R + L ++EV+ +R+ I Sbjct: 1 MVRISGIDLPNSKRIEYALTSVYGIGLTTSRSILAVADIDPSKRTNVLGDTEVMALREVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E++Y+VE DLRR NI RL + C +G RHR+ LPVRGQ Sbjct: 61 EENYKVEEDLRRQTKQNIVRLSQINCVKGRRHRQNLPVRGQ 101 >gi|14591411|ref|NP_143491.1| 30S ribosomal protein S13P [Pyrococcus horikoshii OT3] gi|6226061|sp|O74021|RS13_PYRHO RecName: Full=30S ribosomal protein S13P gi|3258070|dbj|BAA30753.1| 148aa long hypothetical 30S ribosomal protein S13 [Pyrococcus horikoshii OT3] Length = 148 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL + +I RL + YRG+RH GLPV Sbjct: 67 QDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV++K+ Sbjct: 127 RGQRTRSNFRRGQTV---GVSKKK 147 >gi|282891931|ref|ZP_06300410.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498191|gb|EFB40531.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 104 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 51/103 (49%), Positives = 66/103 (64%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIK 79 YI+G+G + + +I KL + P R H+L E E+ I ++ Y VEGDL+R V NIK Sbjct: 2 TYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQSQYVVEGDLKRQVQNNIK 61 Query: 80 RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 RL+ + YRG RHR GLPVRGQRT TNARTRK K +K+ Sbjct: 62 RLISIHSYRGQRHRVGLPVRGQRTRTNARTRKGRRKTVANKKK 104 >gi|57013930|ref|YP_173403.1| ribosomal protein S13 [Nicotiana tabacum] gi|134063|sp|P05488|RT13_TOBAC RecName: Full=Ribosomal protein S13, mitochondrial gi|13150|emb|CAA27645.1| unnamed protein product [Nicotiana tabacum] Length = 116 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 70/115 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARLVGDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K + Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTCRKLIR 115 >gi|323649892|ref|YP_004237265.1| ribosomal protein S13 [Ricinus communis] gi|322394272|gb|ADW96029.1| ribosomal protein S13 [Ricinus communis] Length = 116 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 72/115 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG K + + +L I ++ +L + ++ ++ Q I Sbjct: 1 MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K + Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIR 115 >gi|323398665|ref|YP_004222740.1| ribosomal protein S13 [Glaucocystis nostochinearum] gi|321401358|gb|ADW83112.1| ribosomal protein S13 [Glaucocystis nostochinearum] Length = 116 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 69/113 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +P +K+V +L I+GI K + IC+KL ++ +L ++ + Q + Sbjct: 1 MLYILGFFLPSSKKVRYSLTSIYGINKKLTNKICSKLLFHNNLKIKELTAECILLLTQEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 ++ Y + L+++V NI L+ + YRG+RH G PVRGQRTHTN++T+K+F Sbjct: 61 DKHYLIGSKLKKSVFDNINCLIKINSYRGIRHSLGYPVRGQRTHTNSKTKKRF 113 >gi|11276604|pir||T48605 ribosomal protein S13-like protein F18O22.110 [imported] - Arabidopsis thaliana gi|7573457|emb|CAB87771.1| ribosomal protein precursor-like [Arabidopsis thaliana] Length = 197 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 17/123 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I L + + + E E+I +R + Sbjct: 61 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 119 Query: 62 QDYQVEGDL---------------RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTN 106 + Y +EGDL RR A+ IKRL ++ CYRG+RH +GLP RGQRT N Sbjct: 120 K-YMIEGDLAFVNELLICVVDVVQRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNN 178 Query: 107 ART 109 RT Sbjct: 179 CRT 181 >gi|18978022|ref|NP_579379.1| 30S ribosomal protein S13P [Pyrococcus furiosus DSM 3638] gi|32363354|sp|Q8U0E2|RS13_PYRFU RecName: Full=30S ribosomal protein S13P gi|18893805|gb|AAL81774.1| SSU ribosomal protein S13P [Pyrococcus furiosus DSM 3638] Length = 148 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ DL + +I RL + YRG+RH GLPV Sbjct: 67 ADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147 >gi|14520743|ref|NP_126218.1| 30S ribosomal protein S13P [Pyrococcus abyssi GE5] gi|32363436|sp|Q9V1A0|RS13_PYRAB RecName: Full=30S ribosomal protein S13P gi|5457959|emb|CAB49449.1| rps13P SSU ribosomal protein S13P/S18E [Pyrococcus abyssi GE5] Length = 148 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + +V +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66 Query: 61 E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL + +I RL + YRG+RH GLPV Sbjct: 67 QDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147 >gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus carota] Length = 116 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G K+V A ++GIG K + + +L I ++ +L + ++ Q+ Q I Sbjct: 1 MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|150406483|ref|YP_001315132.1| ribosomal protein S13 [Chlorokybus atmophyticus] gi|126507720|gb|ABO15117.1| ribosomal protein S13 [Chlorokybus atmophyticus] Length = 121 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ ++ K++ AL + GIG S IC++L V QL +S++ ++ + + Sbjct: 1 MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKGGVA 119 Q Y +LRR ++ +IKR + +GCYRG RH LP+RGQRTH+NART RK+ + A Sbjct: 61 NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRKRLNRSTYA 120 Query: 120 R 120 R Sbjct: 121 R 121 >gi|332157867|ref|YP_004423146.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2] gi|331033330|gb|AEC51142.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2] Length = 148 Score = 133 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I G+G + +C + P + L + ++ +I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEIL 66 Query: 61 E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DY+ DL + +I RL + YRG+RH GLPV Sbjct: 67 QDPVAHGIPRWAVNRPKDYETGKDLHLITAKLEMAIREDIMRLRRIRAYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV +K+ Sbjct: 127 RGQRTRSNFRRGQTV---GVTKKK 147 >gi|330850864|ref|YP_004376614.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580] gi|328835684|dbj|BAK18980.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580] Length = 123 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 1/123 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ GV++PR K++ L YIHGIG S++ I I E RV+ L + +RQ + Sbjct: 1 MVRLVGVDLPRNKKITYGLTYIHGIGLTSAKKIVELTNIDSETRVNDLTPEQAGLLRQTL 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 E+ D Q+EGDLRR +NIKRL ++ C+RG RHR LPVRGQRT TNARTR+ K Sbjct: 61 EESDLQLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARTRRGSKKTVTG 120 Query: 120 RKR 122 +K+ Sbjct: 121 KKK 123 >gi|224020963|ref|YP_002608196.1| ribosomal protein S13 [Carica papaya] gi|170522375|gb|ACB20485.1| ribosomal protein S13 [Carica papaya] Length = 116 Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 70/115 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVANEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+R + + CYRG+RH+ G P+RGQRTHTNART +K + Sbjct: 61 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRTHTNARTCRKLIR 115 >gi|168005006|ref|XP_001755202.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693795|gb|EDQ80146.1| predicted protein [Physcomitrella patens subsp. patens] Length = 133 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 6/125 (4%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI GV +P KR+ AL IHG+G +++ I + + + +L E E+ +IR+ + Sbjct: 8 ARIEGVELPNKKRIETALQSIHGVGKTTARQILLTIGL-ENKVTSELSELELTKIREELS 66 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF----GKGG 117 +Y +EG LRR A+NI+RL+D+ CYRG RHR GLPVRGQRT NARTRK+ + Sbjct: 67 -NYMIEGKLRRFNALNIQRLVDIQCYRGRRHRAGLPVRGQRTKCNARTRKRAVLGKKRVV 125 Query: 118 VARKR 122 +K+ Sbjct: 126 AGKKK 130 >gi|328874052|gb|EGG22418.1| protein serine/threonine phosphatase [Dictyostelium fasciculatum] Length = 2108 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56 + RI N+ ++V+ AL + G G + + +C K I +R +L +E+ ++ Sbjct: 389 IIRIYNTNVEGKRKVMYALTDVKGCGRRFANLVCKKADIDFSKRAGELSPAEIERVTTIM 448 Query: 57 ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 R ++ Y + L + +++RL + C RG+RH GL V Sbjct: 449 NHPRQYNIPSWFLNRQRDIVDGKYMQALSNVLDIKLREDLERLKKIRCQRGIRHHLGLKV 508 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T T R + GVA+K+ Sbjct: 509 RGQKTKTTGRRGRTV---GVAKKK 529 >gi|307103900|gb|EFN52157.1| hypothetical protein CHLNCDRAFT_27099 [Chlorella variabilis] Length = 135 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 2/116 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI GV +P K V +L YI GIG +++ I + +R L E E+ ++R+ ++ Sbjct: 6 ARIGGVEVPNQKYVEYSLQYIFGIGHTTAKAILVTTGV-ENKRTKDLSEEELTRLREEVD 64 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + Y VEGDLRR A+NIKRL ++GCYRG RH LPVRGQRT NARTRK Sbjct: 65 R-YTVEGDLRRFNALNIKRLKEIGCYRGRRHYNNLPVRGQRTKNNARTRKGRNAAA 119 >gi|296109383|ref|YP_003616332.1| ribosomal protein S13P [Methanocaldococcus infernus ME] gi|295434197|gb|ADG13368.1| ribosomal protein S13P [Methanocaldococcus infernus ME] Length = 153 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ +I K+V+ AL I+GIG ++ I I P + L + EV +I + ++ Sbjct: 14 RISRTDIDGNKKVIMALQDIYGIGEAMARAIVRVTNIDPNKLAGYLTDEEVKKIEEVLQD 73 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +EGDL +I RL + CYRG+RH GLP RG Sbjct: 74 PAKFGIPSWMFNRRKDYVTGEDKHVIEGDLIVVKQEDINRLKRIKCYRGIRHELGLPCRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+R++ Sbjct: 134 QRTKSTFRRGPTV---GVSRRK 152 >gi|224066875|ref|XP_002302257.1| predicted protein [Populus trichocarpa] gi|222843983|gb|EEE81530.1| predicted protein [Populus trichocarpa] Length = 163 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL YIHGIG K + I +L++ + L E+ +R+ + + Sbjct: 33 RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSL-VNKPTKDLTGIELNSLREEVSK 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Y DL R V +++RL+D+ CYRG RH GLP RGQRT TNARTRK+ K G Sbjct: 92 -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145 >gi|254449327|ref|ZP_05062772.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015] gi|198261086|gb|EDY85386.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015] Length = 97 Score = 131 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 53/96 (55%), Positives = 70/96 (72%), Gaps = 1/96 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 ++GIG + IC+ I P+ ++ +L + E+ ++R + + + VEGDLRR V+MNIKRL Sbjct: 1 MYGIGRTRAYSICDAAGIKPDAKIRELGDDEIEKLRTEVGK-FSVEGDLRREVSMNIKRL 59 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 MDLGCYRGLRHRRGLP+RGQRT TNARTRK K Sbjct: 60 MDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 95 >gi|296411741|ref|XP_002835588.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629374|emb|CAZ79745.1| unnamed protein product [Tuber melanosporum] Length = 216 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 75 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTII 134 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 135 QNPTQYKIPTWFLNRQRDIIDGKDSQILANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 194 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 195 RGQHSKTTGRRGRTV---GVSKKK 215 >gi|253807635|gb|ACT36213.1| ribosomal protein S13 [Helicosporidium sp. ex Simulium jonesi] Length = 127 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 67/122 (54%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I VN +K++ +AL I+GIG S IC+ L + P + ++ + Q I Sbjct: 1 MTYINNVNCSNSKKLYKALTKIYGIGTHHSLQICDSLGLCPHTLLGDCSPQQISSLSQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +Y ++RR + N+++ + + CYRG RH +GLPVRGQRT +N +T +K + + Sbjct: 61 TSNYDTGVEIRRNIKENVQKYIKMACYRGFRHAQGLPVRGQRTRSNHKTVRKLSRLNLTG 120 Query: 121 KR 122 + Sbjct: 121 SK 122 >gi|118488715|gb|ABK96168.1| unknown [Populus trichocarpa] Length = 163 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ IP K++ AL YIHGIG K + I +L++ + L E+ +R+ + + Sbjct: 33 RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSL-VNKPTKDLTGIELNSLREEVSK 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 Y DL R V +++RL+D+ CYRG RH GLP RGQRT TNARTRK+ K G Sbjct: 92 -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145 >gi|57641441|ref|YP_183919.1| 30S ribosomal protein S13P [Thermococcus kodakarensis KOD1] gi|73917914|sp|Q5JJF1|RS13_PYRKO RecName: Full=30S ribosomal protein S13P gi|57159765|dbj|BAD85695.1| SSU ribosomal protein S13P [Thermococcus kodakarensis KOD1] Length = 149 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV+I K+V AL I GIG + + I P + L + +V +I + + Sbjct: 8 IVRVAGVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEIL 67 Query: 61 E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ D+ ++ RL + YRG+RH GLPV Sbjct: 68 ADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV+R++ Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148 >gi|170088480|ref|XP_001875463.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650663|gb|EDR14904.1| predicted protein [Laccaria bicolor S238N-H82] Length = 112 Score = 130 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN+P AL +GIG K++ +C +L + + +V L +V + + Sbjct: 1 MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 R + NI +G Y G RH LPVRGQ T +NA+T KK + Sbjct: 61 SAP-------AREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQ 108 >gi|171686194|ref|XP_001908038.1| hypothetical protein [Podospora anserina S mat+] gi|170943058|emb|CAP68711.1| unnamed protein product [Podospora anserina S mat+] Length = 219 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + ++R +L E+ ++ I Sbjct: 77 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTII 136 Query: 61 EQDY--------------QVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V+G + + +++RL + +RGLRH GL V Sbjct: 137 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 196 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 197 RGQHTKTTGRRGRTV---GVSKKK 217 >gi|331250171|ref|XP_003337697.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316687|gb|EFP93278.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 203 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 60/157 (38%), Gaps = 44/157 (28%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I GVN+P K V L GIG ++ IC +L I V +L E ++ ++ + Sbjct: 2 FILGVNLPEHKLVRIGLTRFVGIGHYTANLICARLQIHKALTVGELSEHQIGRLSALLSS 61 Query: 63 D--------------------------------------------YQVEGDLRRTVAMNI 78 +E DLRR V NI Sbjct: 62 PPTTPPTNHKVAELDGIPAPSTLDFDSGPSPQPKLLSLADDPLQRLLIESDLRREVRANI 121 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G Y+G RH G PV GQRTHTNA+T +K K Sbjct: 122 AHHRAIGSYKGKRHALGFPVNGQRTHTNAKTARKLNK 158 >gi|147919301|ref|YP_686963.1| 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I] gi|121690302|sp|Q0W1V6|RS13_UNCMA RecName: Full=30S ribosomal protein S13P gi|110622359|emb|CAJ37637.1| putative 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I] Length = 224 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 28/149 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V AL I GIG + S+ I + + P + L +V ++R I Sbjct: 72 IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + DL V +I + + Y+G+RH RG VR Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191 Query: 100 GQRTHTNART-------RKKFGKGGVARK 121 GQRT + RT RKK +GG A+K Sbjct: 192 GQRTKSTGRTGATVGVVRKKGEQGGAAKK 220 >gi|11465441|ref|NP_045168.1| ribosomal protein S13 [Cyanidium caldarium] gi|32363435|sp|Q9TLV0|RR13_CYACA RecName: Full=30S ribosomal protein S13, chloroplastic gi|6466344|gb|AAF12926.1|AF022186_48 unknown [Cyanidium caldarium] Length = 122 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 49/101 (48%), Positives = 65/101 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIAG +P KRV AL YI+GIG S+ I +L + RV L+ E+ IR+ I Sbjct: 1 MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 E++Y VE DLRR +NIKRL+++ Y+G RH+ LPVRGQ Sbjct: 61 ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQ 101 >gi|298674774|ref|YP_003726524.1| 30S ribosomal protein S13P [Methanohalobium evestigatum Z-7303] gi|298287762|gb|ADI73728.1| ribosomal protein S13P [Methanohalobium evestigatum Z-7303] Length = 149 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 R+ ++P + V AL I GIG +++ + I P+ ++ L + E+ + I Sbjct: 10 VRVMNTDLPGDQPVRLALTGIKGIGRRTANIVVEGSGIDPDTKIGYLSDEEIDTLNSTIN 69 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + + D+ ++ ++ L YRG+RH RGL VRG Sbjct: 70 NFESHLPSWMLNRQNDPYSGENKHLLGQDIFMSLREDVNTLKKTRAYRGVRHERGLKVRG 129 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV++K+ Sbjct: 130 QRTKSTGRGGSTI---GVSKKK 148 >gi|57281988|emb|CAD19553.1| ribosomal protein S13 [Campynema lineare] Length = 116 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|308153493|sp|P82163|RR13_SPIOL RecName: Full=30S ribosomal protein S13, chloroplastic; Flags: Precursor gi|188036214|pdb|3BBN|M Chain M, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome Length = 145 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 48/110 (43%), Positives = 60/110 (54%), Gaps = 12/110 (10%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKE--- 103 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +R + I+RL ++ CYRG+RH+ GLPVRGQRT N RT K Sbjct: 104 --------KRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG 145 >gi|33341146|gb|AAQ15134.1|AF355059_1 RPS13 [Asphodelus sp. Quagliariello 16105] Length = 116 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|585936|sp|P38017|RS13_MYCSP RecName: Full=30S ribosomal protein S13 gi|625803|pir||C49923 ribosomal protein S13 - Chlamydia trachomatis gi|385203|gb|AAA16205.1| S13 [Chlamydia muridarum] Length = 119 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MAR+ + IP K+ +L YI GIG ++ I + E+RV +L E E+ +IR Sbjct: 1 MARVLNIEIPNNKKARISLTYIFGIGPTIAKQILADANVDGEKRVKELTEEELTRIRDE- 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + Y EGDL+R + +NIKRLM++ YR +RHR+ R T NARTRK K Sbjct: 60 AKKYTTEGDLKREINLNIKRLMEIKSYRVIRHRKDTCKRS--TKKNARTRKGPKK 112 >gi|328353244|emb|CCA39642.1| 30S ribosomal protein S13 [Pichia pastoris CBS 7435] Length = 165 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + L +G+G +++Q +C+KL P R+HQL E +V+ I + + Sbjct: 47 VHILGKGFKGKTLIDIGLSSKFYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKEL 106 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D +EG LR V NI+ +G Y GLRH GLPVRGQRT TNA+T KK K Sbjct: 107 S-DLTIEGKLRSVVRENIQLKRTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 160 >gi|33341158|gb|AAQ15140.1|AF355065_1 RPS13 [Colchicum persicum] Length = 116 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++ ++V A I GIG K + + +L I ++ +L +S++ + Q I Sbjct: 1 MSYISGASLVPDEQVRIASTKIPGIGPKKAIQVRYRLGISGNIKMKELTKSQIDLLEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 CQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|110225647|ref|YP_665653.1| ribosomal protein S13 [Nephroselmis olivacea] gi|6066162|gb|AAF03180.1|AF110138_12 ribosomal protein S13 [Nephroselmis olivacea] Length = 125 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 44/122 (36%), Positives = 71/122 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M IA + + ++V AL I+GIG + IC++L + P ++ QL ++V Q+ + Sbjct: 1 MTTIANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 Q Y L+RT+ ++ RL+ + CYRG R+ + LPVRGQRTHTNA+T +K Sbjct: 61 SQSYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQRTHTNAKTARKRMPTVTRT 120 Query: 121 KR 122 ++ Sbjct: 121 RK 122 >gi|307069672|ref|YP_003878149.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola CARI] gi|306482932|gb|ADM89803.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola CARI] Length = 135 Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG+N+P K + +L I GIG S+ IC I ++ L ++E+ +IR+ I Sbjct: 2 IIRIAGINLPINKNIYISLTKIFGIGINISKKICKVNNIDINKKTKNLNDNELSKIRKEI 61 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + Y +EG+L+R + +NIKRL+D+ YRG+RH LPVRGQRT TNA+T Sbjct: 62 YK-YSIEGELKREIFINIKRLIDIKSYRGIRHILKLPVRGQRTRTNAKTC 110 >gi|315229892|ref|YP_004070328.1| 30S ribosomal protein S18e (S13p) [Thermococcus barophilus MP] gi|315182920|gb|ADT83105.1| SSU ribosomal protein S18e (S13p) [Thermococcus barophilus MP] Length = 148 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + +C + P ++ L + +V I + + Sbjct: 7 IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVCRVAGLDPFQKAGYLTDEQVKLIEEIL 66 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + + L +I RL + YRG+RH GLP+ Sbjct: 67 EDPVKHGIPPWAVNRPKDYETGRDMHLIGAKLVMAWREDINRLRRIRAYRGIRHELGLPL 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV RK+ Sbjct: 127 RGQRTRSNFRRGTTV---GVRRKK 147 >gi|16215380|emb|CAC80432.1| ribosomal protein S13 [Helianthus annuus] Length = 116 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARSVADEQVRIASTKIDGIGPKKAILVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTSRK 112 >gi|57281980|emb|CAD19549.1| ribosomal protein S13 [Tecophilaea violiflora] Length = 116 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYILGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|11497468|ref|NP_042258.1| ribosomal protein S13 [Prototheca wickerhamii] gi|1173316|sp|P46747|RT13_PROWI RecName: Full=Ribosomal protein S13, mitochondrial gi|467859|gb|AAD12646.1| ribosomal protein S13 [Prototheca wickerhamii] Length = 119 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 44/114 (38%), Positives = 65/114 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I ++ K++ +A I+G+G IC+ L + PE R+ L + + Q I Sbjct: 1 MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Q+Y D+RR NI+RL+++ YRG RH +GLPVRGQR+H NART +K Sbjct: 61 TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKLK 114 >gi|76780566|emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardia rosea] gi|76780568|emb|CAD92014.1| mitochondrial ribosomal protein RPS13 [Uvularia perfoliata] Length = 116 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|325973299|ref|YP_004250363.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois] gi|323651901|gb|ADX97983.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois] Length = 162 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 36/157 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41 MARI GV +P K + AL I+GIG +S+ I +KL + Sbjct: 1 MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTEAEKSKLEVYM 60 Query: 42 ERRVHQLVESEVIQIRQAIEQ-----------------DYQVEGDLRRTVAMNIKRLMDL 84 ++RV+ L E+ + QAI + +EGDLR+ ++ ++ L ++ Sbjct: 61 KKRVYSLSSEELASLSQAIVKLQSIQEEVPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120 Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 Y GLRHRR LPV GQRT TNARTRK K +K Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRKGPRKTVANKK 157 >gi|11830845|emb|CAA89892.1| ribosomal protein S13 [Magnolia x soulangeana] gi|30141203|emb|CAD30284.1| ribosomal protein S13 [Freesia sp. QC-2002] Length = 116 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G K+V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|331219824|ref|XP_003322588.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301578|gb|EFP78169.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 215 Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + C K + +R +L E+ +I I Sbjct: 75 ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 134 Query: 61 EQD---------------------YQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + YQV L + +++RL + +RGLRH GL V Sbjct: 135 QNPAQFKIPAWFLNRQRDIVDGKSYQVLSNGLDSKLREDLERLKKIRAHRGLRHYWGLRV 194 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++K+ Sbjct: 195 RGQHTKTTGRRGKTV---GVSKKK 215 >gi|24636943|gb|AAN63484.1|AF314106_1 ribosomal protein S13 [Spiranthes spiralis] Length = 116 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 46/112 (41%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++H+L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIHELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|62989825|emb|CAD91305.1| mitochondrial ribosomal protein RPS13 [Telipogon pogonostalix] Length = 116 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989815|emb|CAD91300.1| mitochondrial ribosomal protein RPS13 [Pleurothallis endotrachys] Length = 116 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ +I Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|325989735|ref|YP_004249434.1| 30S ribosomal protein S13 [Mycoplasma suis KI3806] gi|323574820|emb|CBZ40480.1| 30S ribosomal protein S13 [Mycoplasma suis] Length = 162 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 36/157 (22%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41 MARI GV +P K + AL I+GIG +S+ I +KL + Sbjct: 1 MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTESEKSKLEVYM 60 Query: 42 ERRVHQLVESEVIQIRQAIEQ-----------------DYQVEGDLRRTVAMNIKRLMDL 84 ++RV+ L E+ + QAI + +EGDLR+ ++ ++ L ++ Sbjct: 61 KKRVYSLSSEELASLSQAIVKLQSIQEEIPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120 Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 Y GLRHRR LPV GQRT TNARTRK K +K Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRKGPRKTVANKK 157 >gi|212223248|ref|YP_002306484.1| 30S ribosomal protein S13P [Thermococcus onnurineus NA1] gi|212008205|gb|ACJ15587.1| SSU ribosomal protein S13P [Thermococcus onnurineus NA1] Length = 149 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + I P + L + +V +I + + Sbjct: 8 IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEEIL 67 Query: 61 E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ +I RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPTWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV R++ Sbjct: 128 RGQRTRSNFRHGTTV---GVRRRK 148 >gi|62989799|emb|CAD91292.1| mitochondrial ribosomal protein RPS13 [Oncidium orillum] Length = 116 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|166895633|ref|YP_001661427.1| ribosomal protein S13 [Cycas taitungensis] gi|166706965|dbj|BAF98429.1| ribosomal protein S13 [Cycas taitungensis] Length = 150 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 69/114 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G ++V A I GIG K + + +L I +V++ + ++ QI Q I Sbjct: 1 MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 QD+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +KFG Sbjct: 61 GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRKFG 114 >gi|76780560|emb|CAD92010.1| mitochondrial ribosomal protein RPS13 [Polygonatum hookeri] Length = 116 Score = 126 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|24636958|gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hybrid cultivar] Length = 116 Score = 126 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|57281982|emb|CAD19550.1| ribosomal protein S13 [Luzuriaga radicans] Length = 116 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG + + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989769|emb|CAD91277.1| mitochondrial ribosomal protein RPS13 [Eulophia spectabilis] gi|62989791|emb|CAD91288.1| mitochondrial ribosomal protein RPS13 [Mormodes aromatica] Length = 116 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|198425572|ref|XP_002131089.1| PREDICTED: similar to putative ribosomal protein S18 [Ciona intestinalis] Length = 152 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI + + AL I GIG + S +C K + +R +L + E+ +I + Sbjct: 12 ILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +I+RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|225678479|gb|EEH16763.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb03] Length = 201 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 60 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 119 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 120 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 179 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 180 RGQHTKTTGRRGRTV---GVSKKK 200 >gi|224082650|ref|XP_002306780.1| predicted protein [Populus trichocarpa] gi|118481499|gb|ABK92692.1| unknown [Populus trichocarpa] gi|222856229|gb|EEE93776.1| predicted protein [Populus trichocarpa] Length = 152 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|76780564|emb|CAD92012.1| mitochondrial ribosomal protein RPS13 [Xeronema callistemon] Length = 116 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A I+GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGIRGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|224066487|ref|XP_002302108.1| predicted protein [Populus trichocarpa] gi|118481417|gb|ABK92651.1| unknown [Populus trichocarpa] gi|222843834|gb|EEE81381.1| predicted protein [Populus trichocarpa] Length = 152 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|72095995|ref|XP_794924.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus purpuratus] gi|115959683|ref|XP_001190162.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus purpuratus] Length = 176 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I G+G + + C K I +R +L + EV ++ + Sbjct: 36 ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 95 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + +L + +++RL + +RGLRH GL V Sbjct: 96 QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 155 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 156 RGQHTKTTGRRGRTV---GVSKKK 176 >gi|62989725|emb|CAD91255.1| mitochondrial ribosomal protein RPS13 [Caladenia cf. caerulea Chase O-487] Length = 116 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+GV ++V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGVRSVPDEQVRIASTKMDGIGPKKAIQVRDRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGKRADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40] gi|238507888|ref|XP_002385145.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357] gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae] gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357] Length = 155 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ ++ + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERVVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V +L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|240104026|ref|YP_002960335.1| 30S ribosomal protein S13P [Thermococcus gammatolerans EJ3] gi|239911580|gb|ACS34471.1| SSU ribosomal protein S13P (rps13P) [Thermococcus gammatolerans EJ3] Length = 149 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + + P + L + +V I + + Sbjct: 8 IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGLDPYMKAGYLTDEQVKLIEKIL 67 Query: 61 E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ +I RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV+R++ Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148 >gi|62989781|emb|CAD91283.1| mitochondrial ribosomal protein RPS13 [Lycomormium squalidum] Length = 116 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|321268739|gb|ADW79188.1| ribosomal protein S13 [Cyanophora paradoxa] Length = 115 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 48/112 (42%), Positives = 67/112 (59%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I GV +P V L I G+G ++ ICN L I P +V QL +++I++ Q IE Sbjct: 2 HILGVFLPLDDYVFAGLQKIFGVGKFRAKKICNALLITPFYKVKQLNRNQIIRLSQYIEN 61 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 +Y V DL+ + N K L+ + YRG+RH LPVRGQRTHTN++T+KK Sbjct: 62 NYNVGIDLQNQIKSNFKNLVKISSYRGIRHTLKLPVRGQRTHTNSQTKKKIK 113 >gi|284162135|ref|YP_003400758.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631] gi|284012132|gb|ADB58085.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631] Length = 146 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 24/144 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K V+ AL I GIG + ++ I + L + P ++ +L + + ++R+ + Sbjct: 5 IVRIADTDLDGNKPVMIALTGIKGIGLRMAKAITSALGLNPRAKLGELDDETIERLRKLV 64 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E++ + + D+ ++I++++ + CYRG+RH +G V Sbjct: 65 EEELEQHIPSWMFNRRKDPYSGKDLHLLSKDVDFAKMLDIEKMIKIKCYRGVRHAKGYKV 124 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + R K G V RK+ Sbjct: 125 RGQRTRSTGR--KGMTVGVVRRKK 146 >gi|62989805|emb|CAD91295.1| mitochondrial ribosomal protein RPS13 [Pachyplectron arifolium] Length = 116 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|317146135|ref|XP_003189773.1| 40S ribosomal protein S13 [Aspergillus oryzae RIB40] Length = 137 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P +V +L +V+ I A+ Sbjct: 19 MVFILGVNFPERNLVKKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAAL 78 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR +IKRL + G YRG RH GLPVRGQRT T +T K + Sbjct: 79 SE-MKIENDLRRQYLDDIKRLKETGTYRGRRHALGLPVRGQRTRTQIKTAVKLNR 132 >gi|33341144|gb|AAQ15133.1|AF355058_1 RPS13 [Asparagus sp. Quagliariello 16104] Length = 116 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLIISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTFRK 112 >gi|62989831|emb|CAD91308.1| mitochondrial ribosomal protein RPS13 [Habenaria marmorata] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|24636962|gb|AAN63494.1|AF315230_1 ribosomal protein S13 [Tulipa sp. CQ-2001] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|213422185|ref|ZP_03355251.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 90 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91 + + VEGDLRR ++M+IKRLMDLGCYRGLR Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLR 90 >gi|62989711|emb|CAD91248.1| mitochondrial ribosomal protein RPS13 [Aeranthes moratii] gi|62989717|emb|CAD91251.1| mitochondrial ribosomal protein RPS13 [Arundina graminifolia] gi|62989719|emb|CAD91252.1| mitochondrial ribosomal protein RPS13 [Bletilla striata] gi|62989753|emb|CAD91269.1| mitochondrial ribosomal protein RPS13 [Dendrobium albosanguineum] gi|62989795|emb|CAD91290.1| mitochondrial ribosomal protein RPS13 [Nervilia aragoana] gi|62989807|emb|CAD91296.1| mitochondrial ribosomal protein RPS13 [Palmorchis trilobulata] gi|62989827|emb|CAD91306.1| mitochondrial ribosomal protein RPS13 [Thunia alba] gi|62989833|emb|CAD91309.1| mitochondrial ribosomal protein RPS13 [Phalaenopsis cornu-cervi] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281960|emb|CAD19539.1| ribosomal protein S13 [Rhodohypoxis milloides] gi|62989757|emb|CAD91271.1| mitochondrial ribosomal protein RPS13 [Zygostates grandiflora] gi|62989801|emb|CAD91293.1| mitochondrial ribosomal protein RPS13 [Oncidium splendidum] gi|62989823|emb|CAD91304.1| mitochondrial ribosomal protein RPS13 [Pterostylis nutans] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989821|emb|CAD91303.1| mitochondrial ribosomal protein RPS13 [Ponthieva racemosa] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|62989817|emb|CAD91301.1| mitochondrial ribosomal protein RPS13 [Podochilus cultratus] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989715|emb|CAD91250.1| mitochondrial ribosomal protein RPS13 [Arpophyllum giganteum] gi|62989731|emb|CAD91258.1| mitochondrial ribosomal protein RPS13 [Cattleya aurantiaca] gi|62989741|emb|CAD91263.1| mitochondrial ribosomal protein RPS13 [Coelia triptera] gi|62989785|emb|CAD91285.1| mitochondrial ribosomal protein RPS13 [Meiracyllium trinasutum] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281966|emb|CAD19542.1| ribosomal protein S13 [Convallaria keiskei] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989713|emb|CAD91249.1| mitochondrial ribosomal protein RPS13 [Aa paleacea] Length = 116 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG + + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSKVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|62989729|emb|CAD91257.1| mitochondrial ribosomal protein RPS13 [Calypso bulbosa] Length = 116 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIEKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281968|emb|CAD19543.1| ribosomal protein S13 [Milligania stylosa] gi|57281972|emb|CAD19545.1| ribosomal protein S13 [Doryanthes palmeri] gi|76780557|emb|CAD92008.1| mitochondrial ribosomal protein RPS13 [Isophysis tasmanica] Length = 116 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989771|emb|CAD91278.1| mitochondrial ribosomal protein RPS13 [Goodyera pubescens] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112 >gi|89280752|ref|YP_514659.1| ribosomal protein S13 [Oryza sativa Indica Group] gi|289065036|ref|YP_003433847.1| ribosomal protein small subunit 13 [Oryza rufipogon] gi|74100119|gb|AAZ99283.1| ribosomal protein S13 [Oryza sativa Indica Group] gi|74100174|gb|AAZ99337.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|74100228|gb|AAZ99390.1| ribosomal protein S13 [Oryza sativa Japonica Group] gi|285026118|dbj|BAI67951.1| ribosomal protein small subunit 13 [Oryza rufipogon] gi|285026168|dbj|BAI68000.1| ribosomal protein small subunit 13 [Oryza sativa Indica Group] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 70/115 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K + Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKLIR 115 >gi|56791639|gb|AAW30357.1| ribosomal protein S13 [Eschscholzia californica] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 66/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G ++V A I GIG + + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYIQGXRSVPDEQVRIASTKIDGIGPQKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKREERAXIERLISIYRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|24636927|gb|AAN63476.1|AF314098_1 ribosomal protein S13 [Muscari botryoides] gi|24636933|gb|AAN63479.1|AF314101_1 ribosomal protein S13 [Agave americana] gi|24636935|gb|AAN63480.1|AF314102_1 ribosomal protein S13 [Polianthes tuberosa] gi|24636939|gb|AAN63482.1|AF314104_1 ribosomal protein S13 [Serapias lingua] gi|33341150|gb|AAQ15136.1|AF355061_1 RPS13 [Tulbaghia alliacea] gi|33341154|gb|AAQ15138.1|AF355063_1 RPS13 [Yucca sp. Quagliariello 16107] gi|57281970|emb|CAD19544.1| ribosomal protein S13 [Herreria salsaparilha] gi|76780555|emb|CAD92007.1| mitochondrial ribosomal protein RPS13 [Johnsonia pubescens] gi|76780562|emb|CAD92011.1| mitochondrial ribosomal protein RPS13 [Eriospermum flagelliforme] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|327195251|ref|YP_004339033.1| ribosomal protein S13 [Coccomyxa sp. C-169] gi|325070747|gb|ADY75475.1| ribosomal protein S13 [Coccomyxa sp. C-169] Length = 134 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 63/112 (56%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I N+ K++ AL I+GIG + S+ IC+ L I +V L S + + Q I Sbjct: 1 MIYILNTNLSDNKKIGNALPKIYGIGNQLSKQICDDLGISSGLKVGDLSPSHIDLLSQTI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q Y + +L+ + +RL + YRG+RH +GLP RGQRTH NA+T +K Sbjct: 61 PQTYVIGAELQGETRRSKERLALVSSYRGIRHSQGLPSRGQRTHGNAQTARK 112 >gi|57281998|emb|CAD19558.1| ribosomal protein S13 [Smilax glauca] gi|76780553|emb|CAD92006.1| mitochondrial ribosomal protein RPS13 [Borya septentrionalis] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG + + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|254172984|ref|ZP_04879658.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4] gi|214033140|gb|EEB73968.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4] Length = 149 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++ K++ AL I GIG + + I P + L + +V I + + Sbjct: 8 IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKLIEKIL 67 Query: 61 E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY+ D+ ++ RL + YRG+RH GLP+ Sbjct: 68 EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPL 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV+R++ Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148 >gi|32363483|sp|P08977|RT13_MAIZE RecName: Full=Ribosomal protein S13, mitochondrial gi|897624|gb|AAA70274.1| S13 homologous protein; putative [Zea mays] gi|102579650|gb|ABF70930.1| ribosomal protein S13 [Zea mays subsp. mays] Length = 129 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 45/117 (38%), Positives = 71/117 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++H+L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K + G Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKQIRKG 117 >gi|62989737|emb|CAD91261.1| mitochondrial ribosomal protein RPS13 [Chysis bractescens] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ ++ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989721|emb|CAD91253.1| mitochondrial ribosomal protein RPS13 [Bracisepalum selebicum] gi|62989735|emb|CAD91260.1| mitochondrial ribosomal protein RPS13 [Chelonistele amplissima] gi|62989751|emb|CAD91268.1| mitochondrial ribosomal protein RPS13 [Geesinkorchis alaticallosa] gi|62989765|emb|CAD91275.1| mitochondrial ribosomal protein RPS13 [Entomophobia kinabaluensis] gi|62989793|emb|CAD91289.1| mitochondrial ribosomal protein RPS13 [Nabaluia angustifolia] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989813|emb|CAD91299.1| mitochondrial ribosomal protein RPS13 [Phreatia tahitensis] Length = 116 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88] gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger] Length = 155 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V L + +++RL + +RGLRH GL V Sbjct: 74 QSPTQYKIPTWFLNRQRDITDGKDSQVVSNSLDSKIREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|33341156|gb|AAQ15139.1|AF355064_1 RPS13 [Danae racemosa] gi|57282000|emb|CAD19559.1| ribosomal protein S13 [Ruscus aculeatus] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989743|emb|CAD91264.1| mitochondrial ribosomal protein RPS13 [Cryptocentrum peruvianum] gi|62989745|emb|CAD91265.1| mitochondrial ribosomal protein RPS13 [Cymbidium sp. CQ-2003] gi|62989755|emb|CAD91270.1| mitochondrial ribosomal protein RPS13 [Dichaea riopalenquensis] gi|62989779|emb|CAD91282.1| mitochondrial ribosomal protein RPS13 [Lycaste aromatica] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|24636925|gb|AAN63475.1|AF314097_1 ribosomal protein S13 [Agapanthus africanus] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I R++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNRKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989819|emb|CAD91302.1| mitochondrial ribosomal protein RPS13 [Polystachya pubescens] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHIVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|62989723|emb|CAD91254.1| mitochondrial ribosomal protein RPS13 [Bulbophyllum lobbii] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIKVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|247421835|gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas] Length = 152 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|24636929|gb|AAN63477.1|AF314099_1 ribosomal protein S13 [Ipheion uniflorum] gi|33341148|gb|AAQ15135.1|AF355060_1 RPS13 [Nothoscordum inodorum] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVNWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|289597069|ref|YP_003483765.1| ribosomal protein S13P [Aciduliprofundum boonei T469] gi|289534856|gb|ADD09203.1| ribosomal protein S13P [Aciduliprofundum boonei T469] Length = 148 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V+ A+ I GIG++ ++ I L + P++++ +L + ++ +IR I Sbjct: 7 IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 66 Query: 61 E---------------QDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY D L +I RL + CYRG+RH +GL V Sbjct: 67 EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDINRLKRIKCYRGVRHEKGLRV 126 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R+ GV+RK+ Sbjct: 127 RGQRTRSNGRSGLTV---GVSRKK 147 >gi|255559398|ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis] gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18, putative [Ricinus communis] Length = 152 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|57281974|emb|CAD19546.1| ribosomal protein S13 [Aphyllanthes monspeliensis] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V + + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRISSTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHKDGSPLRGQRTHTNARTFRK 112 >gi|57281984|emb|CAD19551.1| ribosomal protein S13 [Drymophila sp. Chase 194] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|310792538|gb|EFQ28065.1| 30S ribosomal protein S13 [Glomerella graminicola M1.001] Length = 119 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G +SQ I K +I P +V L V + + Sbjct: 1 MVFILGVNFSEQKLVKKALESFFALGPTASQRILAKYSIHPMAKVGTLAPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + +E D R+ + N+ RL D+G YRG RH GLPVRGQRT T T KK + Sbjct: 61 S-NMTIENDARKVIQQNVMRLKDMGSYRGRRHAMGLPVRGQRTRTQIETAKKLNRA 115 >gi|57281958|emb|CAD19538.1| rps13 [Xanthorrhoea resinosa] Length = 116 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|256810446|ref|YP_003127815.1| ribosomal protein S13P [Methanocaldococcus fervens AG86] gi|256793646|gb|ACV24315.1| ribosomal protein S13P [Methanocaldococcus fervens AG86] Length = 150 Score = 124 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R++ ++ K+++ AL I+G+G ++ I + P++ L + EV +I + + Sbjct: 11 RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTDEEVKKIEEILAD 70 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + +E DL +I RL + CYRG+RH GLP RG Sbjct: 71 PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMVVKQEDINRLKRVRCYRGIRHELGLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R + GV+R++ Sbjct: 131 QRTKSTFRRGQTV---GVSRRK 149 >gi|57281986|emb|CAD19552.1| ribosomal protein S13 [Eustrephus latifolius] Length = 116 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q + Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|67083901|gb|AAY66885.1| ribosomal protein S18 [Ixodes scapularis] Length = 153 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|24636960|gb|AAN63493.1|AF315229_1 ribosomal protein S13 [Iris sp. CQ-2001] Length = 116 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPHEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ + +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVLHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|62989763|emb|CAD91274.1| mitochondrial ribosomal protein RPS13 [Earina autumnalis] gi|62989777|emb|CAD91281.1| mitochondrial ribosomal protein RPS13 [Listera smallii] Length = 116 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|242219975|ref|XP_002475760.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia placenta Mad-698-R] gi|220725032|gb|EED79039.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia placenta Mad-698-R] Length = 169 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 50/165 (30%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV +P + AL + +GIG K++ +C ++ I +V L +++ + + Sbjct: 1 MVHILGVLLPDTQLAKFALTHFYGIGHKTAHRLCARVQIHETCKVRDLTSNQITALTAFL 60 Query: 61 EQ--------------------------------------------------DYQVEGDL 70 + ++E +L Sbjct: 61 SSPSTQPSLPRYTLATSNYVPPRVGEPVPENAATITSADGAPVKESLGDRLRNIKIESEL 120 Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 RR + NI +G Y G RH GLPVRGQ T TNA+T KK + Sbjct: 121 RREIRENIAHQRMIGSYVGRRHAMGLPVRGQNTQTNAKTAKKLNR 165 >gi|254167094|ref|ZP_04873947.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|254167757|ref|ZP_04874607.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|197623285|gb|EDY35850.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] gi|197623950|gb|EDY36512.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469] Length = 150 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + V+ A+ I GIG++ ++ I L + P++++ +L + ++ +IR I Sbjct: 9 IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 68 Query: 61 E---------------QDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +DY D L +I RL + CYRG+RH +GL V Sbjct: 69 EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDINRLKRIKCYRGVRHEKGLRV 128 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R+ GV+RK+ Sbjct: 129 RGQRTRSNGRSGLTV---GVSRKK 149 >gi|296081217|emb|CBI18243.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 54 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 113 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 114 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 173 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 174 RGQHTKTTGRRGKTV---GVSKKR 194 >gi|24636931|gb|AAN63478.1|AF314100_1 ribosomal protein S13 [Triteleia laxa] Length = 116 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNSKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQ+THTNART +K Sbjct: 61 SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQQTHTNARTFRK 112 >gi|57281964|emb|CAD19541.1| ribosomal protein S13 [Aspidistra elatior] Length = 116 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|33521690|gb|AAQ21388.1| ribosomal protein S18 [Ixodes ricinus] Length = 152 Score = 124 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|24636954|gb|AAN63490.1|AF315226_1 ribosomal protein S13 [Hyacinthus sp. CQ-2001] Length = 116 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L + ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGLSGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181] gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181] Length = 155 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|121700288|ref|XP_001268409.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1] gi|119396551|gb|EAW06983.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1] Length = 155 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|62989775|emb|CAD91280.1| mitochondrial ribosomal protein RPS13 [Liparis liliifolia] Length = 116 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|269991338|emb|CAX12522.1| 30S ribosomal protein S13 [Fucus vesiculosus] Length = 126 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 4/126 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQI 56 M R G ++ K++ AL I+GIG +++I + RV L + E+ + Sbjct: 1 MVRFLGRDLTNNKKIKYALTTIYGIGLSRAKEILESAGLTNIDQMGTRVKDLSDEEISNL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 R+ +E++YQ+EGDL R +NIKRLM+ G +G RHR GLPVRGQRT TNARTR+ K Sbjct: 61 RKVLEKNYQLEGDLVRITNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNARTRRGSKKT 120 Query: 117 GVARKR 122 +K+ Sbjct: 121 VAGKKK 126 >gi|30141211|emb|CAD30288.1| ribosomal protein S13 [Posidonia oceanica] Length = 116 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLIYISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|81176511|ref|YP_398395.1| rp13 [Triticum aestivum] gi|134064|sp|P07924|RT13_WHEAT RecName: Full=Ribosomal protein S13, mitochondrial gi|13716|emb|CAA68574.1| unnamed protein product [Triticum aestivum] gi|78675235|dbj|BAE47660.1| rps13 [Triticum aestivum] gi|164422217|gb|ABY55190.1| ribosomal protein S13 [Bambusa oldhamii] gi|169649048|gb|ACA62609.1| rp13 [Triticum aestivum] gi|291498599|gb|ADE08073.1| rps13 [Triticum aestivum] Length = 116 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|71005516|ref|XP_757424.1| hypothetical protein UM01277.1 [Ustilago maydis 521] gi|46096907|gb|EAK82140.1| hypothetical protein UM01277.1 [Ustilago maydis 521] Length = 361 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 41/154 (26%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + GV++ K V AL +GI + ++ +C +L++ V L ES++ Q+ + Sbjct: 170 YLLGVHLADHKLVRIALTNFYGISYATANRLCARLSLHDRATVSSLTESQITQLSAYLSS 229 Query: 63 D-----------------------------------------YQVEGDLRRTVAMNIKRL 81 ++E DL+R + NI Sbjct: 230 PGSIPARKASPTLLPSSSAVCSSQDVVRPSMEQNAANDALRQIKIEADLKRVLHANINHH 289 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D+G YRG RH LPVRGQRT TNART KK + Sbjct: 290 RDVGSYRGRRHAAHLPVRGQRTSTNARTAKKLNR 323 >gi|57281996|emb|CAD19557.1| ribosomal protein S13 [Rhipogonum elseyanum] Length = 116 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART ++ Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRR 112 >gi|62989809|emb|CAD91297.1| mitochondrial ribosomal protein RPS13 [Panisea tricallosa] gi|62989811|emb|CAD91298.1| mitochondrial ribosomal protein RPS13 [Pholidota carnea] Length = 116 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|149286992|gb|ABR23395.1| ribosomal protein S18 [Ornithodoros parkeri] Length = 153 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELSEEEVEKLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|317038077|ref|XP_001401569.2| 40S ribosomal protein S13 [Aspergillus niger CBS 513.88] Length = 119 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG +S + + I P +V L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D ++E DLRR NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 61 S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 114 >gi|20094907|ref|NP_614754.1| 30S ribosomal protein S13P [Methanopyrus kandleri AV19] gi|32363353|sp|Q8TVC1|RS13_METKA RecName: Full=30S ribosomal protein S13P gi|19888143|gb|AAM02684.1| Ribosomal protein S13 [Methanopyrus kandleri AV19] Length = 151 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 27/145 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE---------- 50 + RIA V++ K+V AL I GIG + + IC +L + E+++ +L + Sbjct: 9 IVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEI 68 Query: 51 -------SEVIQIRQAIEQDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGL 96 S + ++DY+ D L TV +I RL + YRG+RH GL Sbjct: 69 KKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGL 128 Query: 97 PVRGQRTHTNARTRKKFGKGGVARK 121 PVRGQRT ++ R + GV +K Sbjct: 129 PVRGQRTKSSFRRGRTV---GVKKK 150 >gi|320592066|gb|EFX04505.1| 40S ribosomal protein s13 [Grosmannia clavigera kw1407] Length = 118 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + IG ++S I K +I P ++ L V + + Sbjct: 1 MVFILGVNFNELKLVKKALESFYAIGPQTSARILAKFSIHPRAKMGTLPPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + VE D RR V NIKRL D+G YRG RH GLPVRGQRT T T +K K Sbjct: 61 S-NMTVENDARRVVQDNIKRLRDMGTYRGKRHAMGLPVRGQRTRTQILTARKLNK 114 >gi|300121915|emb|CBK22489.2| unnamed protein product [Blastocystis hominis] Length = 163 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++V AL I GIG + + +C K I RR +L E+ ++ I Sbjct: 23 ILRVLNTNIDGKQKIVYALTSIKGIGRRFAMAVCKKAEIDISRRAGELSNDEIEKLIAVI 82 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V +L+ + ++ RL + RGLRH L V Sbjct: 83 STPLQFDIPEWFLNRQKDVETGKYRQVVSNNLQANLREDLNRLKKMRANRGLRHYWNLKV 142 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV+ K+ Sbjct: 143 RGQHTKTTGRFGKSV---GVSTKK 163 >gi|30141201|emb|CAD30283.1| ribosomal protein S13 [Hemerocallis littorea] Length = 118 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 74/115 (64%), Gaps = 4/115 (3%) Query: 1 MARIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57 M+ I+G V++P ++ V A + GIG K + + +L I ++++L + ++ Q+ Sbjct: 1 MSYISGARSVSVPDSQ-VRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQME 59 Query: 58 QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 Q I QD+ V +L+R +I+RL+ + YRG+RH+ GLP+RGQRTHTNART +K Sbjct: 60 QMIGQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTCRK 114 >gi|224085191|ref|XP_002307515.1| predicted protein [Populus trichocarpa] gi|222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa] Length = 152 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + S +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFSNIVCKKADVDMNKRAGELSAAELDNLMTIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|62989783|emb|CAD91284.1| mitochondrial ribosomal protein RPS13 [Megastylis glandulosa] Length = 116 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255] Length = 155 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTIL 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V L + +++RL + +RGLRH GL V Sbjct: 74 QTPTQYKIPSWFLNRQRDITDGKDTQVVSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|114151585|ref|YP_740351.1| ribosomal protein S13 [Zea perennis] gi|114151617|ref|YP_740439.1| ribosomal protein S13 [Zea luxurians] gi|114151651|ref|YP_740416.1| ribosomal protein S13 [Zea mays subsp. parviglumis] gi|115278553|ref|YP_762332.1| ribosomal protein S13 [Sorghum bicolor] gi|115278623|ref|YP_762484.1| ribosomal protein S13 [Tripsacum dactyloides] gi|55851987|gb|AAV67796.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116057|gb|ABE98690.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116102|gb|ABE98734.1| ribosomal protein S13 [Zea mays subsp. mays] gi|93116150|gb|ABE98781.1| ribosomal protein S13 [Zea mays subsp. mays] gi|102567919|gb|ABF70836.1| ribosomal protein S13 [Zea perennis] gi|102567984|gb|ABF70868.1| ribosomal protein S13 [Zea mays subsp. parviglumis] gi|110287613|gb|ABG65659.1| ribosomal protein S13 [Zea luxurians] gi|114309674|gb|ABI60891.1| ribosomal protein S13 [Sorghum bicolor] gi|114432114|gb|ABI74663.1| ribosomal protein S13 [Tripsacum dactyloides] Length = 116 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++H+L + ++ QI Q I Sbjct: 1 MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|211938661|gb|ACJ13227.1| FI09342p [Drosophila melanogaster] Length = 170 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 30 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 89 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 90 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 149 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 150 RGQHTKTTGRRGRTV---GVSKKK 170 >gi|56755399|gb|AAW25879.1| unknown [Schistosoma japonicum] Length = 157 Score = 123 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K I +R +L + EV ++ + Sbjct: 17 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 76 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RG+RH GL V Sbjct: 77 SNPSQSKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 136 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 137 RGQHTKTTGRRGRTV---GVSRKK 157 >gi|57281992|emb|CAD19555.1| ribosomal protein S13 [Philesia magellanica] gi|57281994|emb|CAD19556.1| ribosomal protein S13 [Lapageria rosea] Length = 116 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQGGSPLRGQRTHTNARTFRK 112 >gi|62989767|emb|CAD91276.1| mitochondrial ribosomal protein RPS13 [Epipactis helleborine] Length = 116 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|62989727|emb|CAD91256.1| mitochondrial ribosomal protein RPS13 [Caleana major] Length = 116 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTQMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|15219950|ref|NP_173692.1| PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding / structural constituent of ribosome [Arabidopsis thaliana] gi|15234790|ref|NP_192718.1| RPS18C (S18 RIBOSOMAL PROTEIN); RNA binding / nucleic acid binding / structural constituent of ribosome [Arabidopsis thaliana] gi|18399100|ref|NP_564434.1| 40S ribosomal protein S18 (RPS18B) [Arabidopsis thaliana] gi|297809155|ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp. lyrata] gi|297845304|ref|XP_002890533.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp. lyrata] gi|297851838|ref|XP_002893800.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp. lyrata] gi|464707|sp|P34788|RS18_ARATH RecName: Full=40S ribosomal protein S18 gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein S18 [Arabidopsis thaliana] gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal protein S18; 25853-24673 [Arabidopsis thaliana] gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal protein [Arabidopsis thaliana] gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5 [Arabidopsis thaliana] gi|405613|emb|CAA80684.1| ribosomal protein S18A [Arabidopsis thaliana] gi|434343|emb|CAA82273.1| S18 ribosomal protein [Arabidopsis thaliana] gi|434345|emb|CAA82274.1| S18 ribosomal protein [Arabidopsis thaliana] gi|434906|emb|CAA82275.1| S18 ribosomal protein [Arabidopsis thaliana] gi|2505871|emb|CAA72909.1| ribosomal protein S18A [Arabidopsis thaliana] gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A. thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and gb|R30430 come from this gene [Arabidopsis thaliana] gi|4538910|emb|CAB39647.1| S18.A ribosomal protein [Arabidopsis thaliana] gi|7267675|emb|CAB78103.1| S18.A ribosomal protein [Arabidopsis thaliana] gi|14334584|gb|AAK59471.1| putative ribosomal protein S18 [Arabidopsis thaliana] gi|17979113|gb|AAL47500.1| putative ribosomal protein S18 [Arabidopsis thaliana] gi|21555397|gb|AAM63849.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|21592452|gb|AAM64403.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|21593027|gb|AAM64976.1| ribosomal protein S18, putative [Arabidopsis thaliana] gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis thaliana] gi|56236126|gb|AAV84519.1| At1g22780 [Arabidopsis thaliana] gi|98961089|gb|ABF59028.1| At1g22780 [Arabidopsis thaliana] gi|145713244|gb|ABP96570.1| pointed first leaf [Arabidopsis thaliana] gi|145713246|gb|ABP96571.1| pointed first leaf [Arabidopsis thaliana] gi|145713248|gb|ABP96572.1| pointed first leaf [Arabidopsis thaliana] gi|145713250|gb|ABP96573.1| pointed first leaf [Arabidopsis thaliana] gi|145713252|gb|ABP96574.1| pointed first leaf [Arabidopsis thaliana] gi|145713254|gb|ABP96575.1| pointed first leaf [Arabidopsis thaliana] gi|145713256|gb|ABP96576.1| pointed first leaf [Arabidopsis thaliana] gi|145713258|gb|ABP96577.1| pointed first leaf [Arabidopsis thaliana] gi|145713260|gb|ABP96578.1| pointed first leaf [Arabidopsis thaliana] gi|145713262|gb|ABP96579.1| pointed first leaf [Arabidopsis thaliana] gi|145713264|gb|ABP96580.1| pointed first leaf [Arabidopsis thaliana] gi|145713266|gb|ABP96581.1| pointed first leaf [Arabidopsis thaliana] gi|145713268|gb|ABP96582.1| pointed first leaf [Arabidopsis thaliana] gi|145713270|gb|ABP96583.1| pointed first leaf [Arabidopsis thaliana] gi|145713272|gb|ABP96584.1| pointed first leaf [Arabidopsis thaliana] gi|145713274|gb|ABP96585.1| pointed first leaf [Arabidopsis thaliana] gi|145713276|gb|ABP96586.1| pointed first leaf [Arabidopsis thaliana] gi|145713278|gb|ABP96587.1| pointed first leaf [Arabidopsis thaliana] gi|145713280|gb|ABP96588.1| pointed first leaf [Arabidopsis thaliana] gi|145713282|gb|ABP96589.1| pointed first leaf [Arabidopsis thaliana] gi|145713284|gb|ABP96590.1| pointed first leaf [Arabidopsis thaliana] gi|297318298|gb|EFH48720.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp. lyrata] gi|297336375|gb|EFH66792.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp. lyrata] gi|297339642|gb|EFH70059.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp. lyrata] gi|332192166|gb|AEE30287.1| 40S ribosomal protein S18 [Arabidopsis thaliana] gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18 [Arabidopsis thaliana] Length = 152 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|294463827|gb|ADE77437.1| unknown [Picea sitchensis] Length = 152 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRFANLVCKKADVDMNKRAGELSAAELENLMTIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 SNPKQFKIPEWFLNRQKDYKDGRTNQLVSNALDMRLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|46125031|ref|XP_387069.1| hypothetical protein FG06893.1 [Gibberella zeae PH-1] Length = 179 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 37 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIL 96 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + +++RL + +RGLRH GL V Sbjct: 97 QNPTQYKIPTWFINRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 156 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 157 RGQHTKTTGRRGRTV---GVSKKK 177 >gi|24636941|gb|AAN63483.1|AF314105_1 ribosomal protein S13 [Serapias vomeracea] Length = 116 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|25553581|dbj|BAC24846.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|50509331|dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|125599284|gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group] Length = 148 Score = 123 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + S C K I +R +L E+ ++ + Sbjct: 8 ILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 67 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 68 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 128 RGQHTKTTGRRGKTV---GVSKKR 148 >gi|299115551|emb|CBN75754.1| conserved unknown protein [Ectocarpus siliculosus] Length = 192 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V +L I G+G + + IC K + P +R ++ E+ ++ I Sbjct: 52 ILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAII 111 Query: 61 EQDYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RG+RH G+ V Sbjct: 112 QNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRV 171 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ T T R K GG Sbjct: 172 RGQHTKTTGRRGKIVAAGG 190 >gi|62989797|emb|CAD91291.1| mitochondrial ribosomal protein RPS13 [Neuwiedia veratrifolia] Length = 116 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGHKKAMKVRYRLGISGNIKMNELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|156542046|ref|XP_001601390.1| PREDICTED: similar to S18e ribosomal protein [Nasonia vitripennis] Length = 165 Score = 123 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I + Sbjct: 25 ILRVVGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 84 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++R+ + +RGLRH GL V Sbjct: 85 ANPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGLRHYWGLRV 144 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 145 RGQHTKTTGRRGRTV---GVSKKK 165 >gi|57281976|emb|CAD19547.1| ribosomal protein S13 [Behnia reticulata] gi|57281978|emb|CAD19548.1| ribosomal protein S13 [Blandfordia punicea] Length = 116 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTFRK 112 >gi|21228257|ref|NP_634179.1| 30S ribosomal protein S13P [Methanosarcina mazei Go1] gi|32363348|sp|Q8PV19|RS13_METMA RecName: Full=30S ribosomal protein S13P gi|20906714|gb|AAM31851.1| SSU ribosomal protein S13P [Methanosarcina mazei Go1] Length = 162 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI ++ AK V AL + GIG +++ I + P + L + EV ++ AI Sbjct: 24 VRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAIG 83 Query: 62 Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + + D+ T +I L + YRGLRH RGL VRG Sbjct: 84 KFEEIVPSWMLNRQKDLTTGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+RK+ Sbjct: 144 QRTKSTGRRGSTV---GVSRKK 162 >gi|254571277|ref|XP_002492748.1| Putative mitochondrial ribosomal protein of the small subunit [Pichia pastoris GS115] gi|238032546|emb|CAY70569.1| Putative mitochondrial ribosomal protein of the small subunit [Pichia pastoris GS115] Length = 121 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + L +G+G +++Q +C+KL P R+HQL E +V+ I + + Sbjct: 3 VHILGKGFKGKTLIDIGLSSKFYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D +EG LR V NI+ +G Y GLRH GLPVRGQRT TNA+T KK K Sbjct: 63 S-DLTIEGKLRSVVRENIQLKRTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 116 >gi|62989787|emb|CAD91286.1| mitochondrial ribosomal protein RPS13 [Microtis parviflora] Length = 116 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|255566712|ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis] gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18, putative [Ricinus communis] Length = 152 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7] gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7] Length = 156 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V+ AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + +++R+ + +RGLRH GL V Sbjct: 74 STPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|322695969|gb|EFY87768.1| 40S ribosomal protein S18 [Metarhizium acridum CQMa 102] gi|322707043|gb|EFY98622.1| 40S ribosomal protein S18 [Metarhizium anisopliae ARSEF 23] Length = 156 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|18024674|gb|AAF98448.1| putative mitochondrial 40S ribosomal protein [Aspergillus niger] Length = 148 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 3/115 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P ++L GIG +S + + I P +V L +V+ I A+ Sbjct: 1 MVFILGVNFPERNL--KSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D ++E DLRR NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 59 S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 112 >gi|50291021|ref|XP_447943.1| hypothetical protein [Candida glabrata CBS 138] gi|49527254|emb|CAG60894.1| unnamed protein product [Candida glabrata] Length = 126 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + + AL +G+G +++ +C+KL P R+HQL E +++ I + Sbjct: 3 VHILGKAFKGKEVIRIALASKFYGVGKSTAERLCSKLGFYPWMRMHQLSEPQILNITSEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 + +EGD R V NI +G Y G+RH GLPVRGQRT NA+T +K + GV Sbjct: 63 S-NMTIEGDARAIVRENIALKKKIGSYEGMRHALGLPVRGQRTRNNAKTARKINRIGV 119 >gi|289807631|ref|ZP_06538260.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 88 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89 + + VEGDLRR ++M+IKRLMDLGCYRG Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRG 88 >gi|115455881|ref|NP_001051541.1| Os03g0794700 [Oryza sativa Japonica Group] gi|297606796|ref|NP_001059007.2| Os07g0173700 [Oryza sativa Japonica Group] gi|25553579|dbj|BAC24844.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|28269440|gb|AAO37983.1| putative ribosomal protein S18A [Oryza sativa Japonica Group] gi|50400039|gb|AAT76427.1| putative ribosomal protein S18A [Oryza sativa Japonica Group] gi|50509329|dbj|BAD30787.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gi|108711530|gb|ABF99325.1| 40S ribosomal protein S18, putative, expressed [Oryza sativa Japonica Group] gi|113550012|dbj|BAF13455.1| Os03g0794700 [Oryza sativa Japonica Group] gi|125557400|gb|EAZ02936.1| hypothetical protein OsI_25076 [Oryza sativa Indica Group] gi|215765128|dbj|BAG86825.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765330|dbj|BAG87027.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636521|gb|EEE66653.1| hypothetical protein OsJ_23275 [Oryza sativa Japonica Group] gi|255677547|dbj|BAF20921.2| Os07g0173700 [Oryza sativa Japonica Group] Length = 152 Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S C K I +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|4467407|emb|CAA69616.2| ribosomal protein S13 [Elymus sibiricus] Length = 116 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MXYIXGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISXNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112 >gi|226504536|ref|NP_001151612.1| 40S ribosomal protein S18 [Zea mays] gi|242032711|ref|XP_002463750.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor] gi|194708790|gb|ACF88479.1| unknown [Zea mays] gi|195605976|gb|ACG24818.1| 40S ribosomal protein S18 [Zea mays] gi|195618188|gb|ACG30924.1| 40S ribosomal protein S18 [Zea mays] gi|195620216|gb|ACG31938.1| 40S ribosomal protein S18 [Zea mays] gi|195648096|gb|ACG43516.1| 40S ribosomal protein S18 [Zea mays] gi|238008500|gb|ACR35285.1| unknown [Zea mays] gi|241917604|gb|EER90748.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor] Length = 152 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELERLMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|62989739|emb|CAD91262.1| mitochondrial ribosomal protein RPS13 [Cleistes rosea] Length = 116 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ ++ Q I Sbjct: 1 MSYISGARSVPDSKVRIASTKMDGIGPKKAIQVRSRLGISGNIKINELTKSQIDKMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V + +R +I+RL+ L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWEFQRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|223469633|gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas] Length = 152 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNPRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|242398330|ref|YP_002993754.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739] gi|242264723|gb|ACS89405.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739] Length = 156 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A V+I K++ AL I GIG + IC + P+ + L E +V I + Sbjct: 15 IVRVANVDIDGHKQLRLALTGIRGIGVNFATVICRIAGLDPKMKAGYLTEEQVKAIEAVL 74 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + + L ++ RL + YRG+RH GLP+ Sbjct: 75 EDPAKHGLPSWILNRPKDYEQGRDMHLIGAKLVMAWREDVNRLRKIRAYRGIRHELGLPL 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV+R++ Sbjct: 135 RGQRTRSNFRRGLTL---GVSRRK 155 >gi|156372342|ref|XP_001628997.1| predicted protein [Nematostella vectensis] gi|156215987|gb|EDO36934.1| predicted protein [Nematostella vectensis] Length = 153 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ A+ I G+G + + +C K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGKQKIMFAMTSIKGVGRRYANIVCKKADIDMNKRAGELTEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDHKDGKYSQILANGLDNKMREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 132 RGQHTKTTGRKGRTV---GVAKKK 152 >gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas] Length = 152 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++++ A+ I GIG + + +C K + +R +L E E+ +I + Sbjct: 12 ILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKFSQVMSNTLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152 >gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4] gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550) [Aspergillus nidulans FGSC A4] Length = 155 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL + G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTIL 73 Query: 61 E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DYQV L +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|13877525|gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana] gi|17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana] Length = 152 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKTDVDMNKRAGELSAAEIDNLMTIV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|20089977|ref|NP_616052.1| 30S ribosomal protein S13P [Methanosarcina acetivorans C2A] gi|19914940|gb|AAM04532.1| ribosomal protein S13p [Methanosarcina acetivorans C2A] Length = 182 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI ++ AK V AL + G+G ++++ I + P + L E EV ++ AI Sbjct: 44 VRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIG 103 Query: 62 Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + + D+ T +I L + YRGLRH RGL VRG Sbjct: 104 KFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 163 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+RK+ Sbjct: 164 QRTKSTGRRGSTV---GVSRKK 182 >gi|226493800|ref|NP_001141254.1| hypothetical protein LOC100273341 [Zea mays] gi|194703562|gb|ACF85865.1| unknown [Zea mays] gi|195618614|gb|ACG31137.1| 40S ribosomal protein S18 [Zea mays] Length = 152 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|242772774|ref|XP_002478105.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500] gi|218721724|gb|EED21142.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500] Length = 163 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R + E+ +I I Sbjct: 22 IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 81 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 82 QNPTQYKIPSWFLNRQRDIVDGKDSQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 141 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 142 RGQHTKTTGRRGRTV---GVSKKK 162 >gi|62989773|emb|CAD91279.1| mitochondrial ribosomal protein RPS13 [Huttonaea grandiflora] Length = 116 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +D+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|57281990|emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax] Length = 116 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIAQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHT+ART + Sbjct: 61 GQDHVVHWELKRGERAHIERLISISRYRGIRHQEGSPLRGQRTHTSARTFRT 112 >gi|115661694|ref|XP_001202116.1| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] gi|115689720|ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] Length = 152 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I G+G + + C K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + +L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|62989733|emb|CAD91259.1| mitochondrial ribosomal protein RPS13 [Cephalanthera rubra] Length = 116 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA] gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii str. 17XNL] gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii] gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei] Length = 156 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + +++R+ + +RGLRH GL V Sbjct: 74 SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|56758184|gb|AAW27232.1| SJCHGC01887 protein [Schistosoma japonicum] gi|226472372|emb|CAX77222.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472374|emb|CAX77223.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472376|emb|CAX77224.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472378|emb|CAX77225.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472380|emb|CAX77226.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472382|emb|CAX77227.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472384|emb|CAX77228.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472386|emb|CAX77229.1| ribosomal protein S18 [Schistosoma japonicum] gi|226472388|emb|CAX77230.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473486|emb|CAX71428.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473488|emb|CAX71429.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473490|emb|CAX71430.1| ribosomal protein S18 [Schistosoma japonicum] gi|226473492|emb|CAX71431.1| ribosomal protein S18 [Schistosoma japonicum] Length = 152 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K I +R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152 >gi|24636937|gb|AAN63481.1|AF314103_1 ribosomal protein S13 [Dactylorhiza romana] Length = 116 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|22550356|ref|NP_689356.1| ribosomal protein S13 [Chaetosphaeridium globosum] gi|22417022|gb|AAM96621.1|AF494279_26 ribosomal protein S13 [Chaetosphaeridium globosum] Length = 122 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 42/103 (40%), Positives = 68/103 (66%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70 K++ AL ++GIG + IC+ L + P +V+QL + ++ + I ++ +E +L Sbjct: 15 NKKQLRFALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELEL 74 Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +R V +I+RL+ +GCYRGLRH GLP+RGQRTHTNA+T ++ Sbjct: 75 KRIVQTDIRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRL 117 >gi|62989747|emb|CAD91266.1| mitochondrial ribosomal protein RPS13 [Cypripedium adamianum] gi|62989749|emb|CAD91267.1| mitochondrial ribosomal protein RPS13 [Paphiopedilum insigne] Length = 117 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR-GLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERLISISRYRGIRHQDGGSPLRGQRTHTNARTCRK 113 >gi|115390150|ref|XP_001212580.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624] gi|114194976|gb|EAU36676.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624] Length = 155 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ ++ + Sbjct: 14 ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERVVTIL 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPAWFLNRQRDITDGKDAHVLSNGVDQKAREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|324525495|gb|ADY48555.1| 40S ribosomal protein S18 [Ascaris suum] Length = 154 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I +R +L E ++ ++ Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINKRAGELTEEDMEKLTQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PKQYKIPNWFLNRQKDIKDGKYTQCLSTALDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|225432662|ref|XP_002282412.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225437044|ref|XP_002278727.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225460586|ref|XP_002262702.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 152 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|156847769|ref|XP_001646768.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM 70294] gi|156117448|gb|EDO18910.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM 70294] Length = 146 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL YI G+G + + +C K + +R +L + E+ ++ Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + ++ + +++RL + +RG+RH GL V Sbjct: 74 QNPTNFKIPAWFLNRQKDVNDGKDYHSLANNIESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|91083227|ref|XP_973632.1| PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum] gi|270007711|gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum] Length = 152 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ AL I G+G + S + K + ++R + + EV +I + Sbjct: 12 ILRILNTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSDEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|269101038|ref|YP_003289186.1| 30S ribosomal protein S13 [Ectocarpus siliculosus] gi|266631546|emb|CAV31217.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus] gi|270118676|emb|CAT18738.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus] Length = 126 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 4/126 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQI 56 M R G ++ K++ AL I+GIG +++I K + R L + ++ + Sbjct: 1 MVRFLGRDLANNKKIKYALTAIYGIGLSRAKEILEKAGLENVDKEGVRTKDLSDEDISNL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 R+ +E+DYQ+E DL R +NIKRLM+ G +G RHR GLPVRGQRT TN RTR+ K Sbjct: 61 RKVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKT 120 Query: 117 GVARKR 122 + + Sbjct: 121 VAGKNK 126 >gi|304314284|ref|YP_003849431.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str. Marburg] gi|302587743|gb|ADL58118.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str. Marburg] Length = 149 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIA +I K + AL I G+G S+ I +R+ L + E+ ++ +AI Sbjct: 8 MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KNPAKYNIPSWMINRRNDYETGEDKHLIESDLDMCLREDLNRMRKTRSYKGRRHELGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + T +K GV RK+ Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148 >gi|15678064|ref|NP_275178.1| 30S ribosomal protein S13P [Methanothermobacter thermautotrophicus str. Delta H] gi|3122789|sp|O26141|RS13_METTH RecName: Full=30S ribosomal protein S13P gi|2621070|gb|AAB84542.1| ribosomal protein S18 (E.coli ) [Methanothermobacter thermautotrophicus str. Delta H] Length = 149 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RIA +I K + AL I G+G S+ I +R+ L + E+ ++ +AI Sbjct: 8 MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT + T +K GV RK+ Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148 >gi|56791635|gb|AAW30355.1| ribosomal protein S13 [Piper betle] Length = 109 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 66/107 (61%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G + ++V A + GIG K + + +L I ++++L + ++ ++ Q I QD+ Sbjct: 2 GARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHV 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L++ +I+RL+ + YRG+RH+ G PVRGQRTHTNART +K Sbjct: 62 VHWELKKGERADIERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108 >gi|70909571|emb|CAJ17207.1| ribosomal protein S18e [Curculio glandium] Length = 152 Score = 121 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G NI ++V+ AL I G+G + S + K + ++R + E EV +I + Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|50344504|emb|CAH04338.1| S18e ribosomal protein [Timarcha balearica] Length = 152 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G NI ++V+ AL I G+G + S + K + ++R + E EV +I + Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYSNLVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|32363352|sp|Q8TRR2|RS13_METAC RecName: Full=30S ribosomal protein S13P Length = 162 Score = 121 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI ++ AK V AL + G+G ++++ I + P + L E EV ++ AI Sbjct: 24 VRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIG 83 Query: 62 Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + + D+ T +I L + YRGLRH RGL VRG Sbjct: 84 KFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+RK+ Sbjct: 144 QRTKSTGRRGSTV---GVSRKK 162 >gi|116207686|ref|XP_001229652.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51] gi|88183733|gb|EAQ91201.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51] Length = 156 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + +R +L E+ ++ I Sbjct: 14 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERLVTII 73 Query: 61 EQD--------------YQVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTAYKIPSWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|264667373|gb|ACY71272.1| ribosomal protein S18 [Chrysomela tremulae] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G NI ++V+ AL I G+G + + + K + ++R + + EV +I + Sbjct: 12 ILRILGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSDEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++R+ + +RG+RH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIIDGKYSQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|242043060|ref|XP_002459401.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor] gi|241922778|gb|EER95922.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I G+G + S +C K I +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELSSDELERLMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|195998744|ref|XP_002109240.1| ribosomal protein S18 [Trichoplax adhaerens] gi|190587364|gb|EDV27406.1| ribosomal protein S18 [Trichoplax adhaerens] Length = 153 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G NI +++ AL I G G + + +C K + ++R +L E E+ ++ + Sbjct: 13 ILRVMGTNIDGRVKIMFALTAIKGCGRRFANIVCKKAGVDIDKRAGELTEDEIDKVITIM 72 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + +L + +++RL + +RG+RH GL V Sbjct: 73 QNPRQYKIPDWFLNRQKDIKDGKFSQVLSNNLETKLREDLERLKKVRAHRGIRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 133 RGQHTKTTGRKGRTV---GVAKKK 153 >gi|318086970|gb|ADV40077.1| ribosomal protein S18 [Latrodectus hesperus] Length = 153 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G+G + S +C K + +R +L E EV ++ + Sbjct: 12 ILRVMNTNIDGRRKVMFALTAIKGVGRRFSNLVCKKADVDLNKRAGELSEEEVEKLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + ++GLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNGLENKLREDLERLKKIRAHKGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|260829983|ref|XP_002609941.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae] gi|41018059|sp|Q8ISP0|RS18_BRABE RecName: Full=40S ribosomal protein S18 gi|24266988|gb|AAN52390.1| ribosomal protein S18 [Branchiostoma belcheri] gi|229295303|gb|EEN65951.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I G+G + S +C K I +R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|194753476|ref|XP_001959038.1| ribosomal protein S18 [Drosophila ananassae] gi|190620336|gb|EDV35860.1| ribosomal protein S18 [Drosophila ananassae] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIVDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|74325175|ref|YP_316595.1| ribosomal protein S13 [Thalassiosira pseudonana] gi|74100241|gb|AAZ99402.1| ribosomal protein S13 [Thalassiosira pseudonana] Length = 115 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I +P K + +L + GIG S IC +L + ++ +L + I++ ++I Sbjct: 1 MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 E + + +LR++ + +K+L+ + Y+G+R RGLPVRGQRTHTNA+T + Sbjct: 61 ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKTASR 113 >gi|325182081|emb|CCA16534.1| 40S ribosomal protein S18 putative [Albugo laibachii Nc14] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++ AL I GIG + + IC K + +R +L E+ ++ I Sbjct: 12 ILRILNTNIDGRRKCWIALTSIAGIGRRFAILICKKAEVDITKRAGELSNDEIERLVAII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V +L+ + +++RL + +RGLRH GL V Sbjct: 72 QNPLQFKIPVWFLNRKKDYKTGKHSQAVANNLQGKLREDLERLKKIHTHRGLRHCWGLKV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 132 RGQHTKTTGRRGRTVG 147 >gi|170291190|ref|YP_001738006.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8] gi|170175270|gb|ACB08323.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8] Length = 149 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ + K V+ AL + GI + I K I P R + +L + E +I + Sbjct: 9 IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++ + D+ + +I + +G ++G+RH GL V Sbjct: 69 NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R K G RK+ Sbjct: 129 RGQRTKTTGRVGKTV---GYQRKK 149 >gi|212531369|ref|XP_002145841.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] gi|210071205|gb|EEA25294.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] Length = 155 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R + E+ +I I Sbjct: 14 IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPAWFLNRQRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool] Length = 156 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++VV AL I GIG + S IC K I +R +L E+ ++ Sbjct: 14 ILRILNTNVDGREKVVIALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V L +++RL + +RGLRH GL V Sbjct: 74 STPQQFKIPTWFLNRQKDVRDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704] gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704] Length = 157 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 16 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 75 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + ++ + +++RL + +RGLRH GL V Sbjct: 76 QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 135 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 136 RGQHTKTTGRRGRTV---GVSKKK 156 >gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1] gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1] gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR] gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88] Length = 155 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|30141205|emb|CAD30285.1| ribosomal protein S13 [Lilium speciosum] Length = 116 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V + + GIG K + + +L + + ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +LRR +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHLVHWELRRGSRADIERLISIYPYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|24636956|gb|AAN63491.1|AF315227_1 ribosomal protein S13 [Sansevieria trifasciata] Length = 116 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+ ++V A I GIG K + + +L I ++++L + ++ QI Q + Sbjct: 1 MLYISVSRSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|121544007|gb|ABM55667.1| putative ribosomal protein S18 [Maconellicoccus hirsutus] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI +++ AL I GIG + S + K + ++R + + EV +I + Sbjct: 12 ILRIMNTNIDGKIKIMFALTAIKGIGRRFSNVVLKKADVDLDKRAGECSDEEVEKIITIM 71 Query: 61 EQDYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 TNPRQFKIPDWFLNRQKDIVDGKYLQLASSNLDSKIREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|327289179|ref|XP_003229302.1| PREDICTED: 40S ribosomal protein S18-like [Anolis carolinensis] Length = 197 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 57 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 116 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 117 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 176 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 177 RGQHTKTTGRRGRTV---GVSKKK 197 >gi|187119176|ref|NP_001119689.1| ribosomal protein S18 [Acyrthosiphon pisum] gi|89473736|gb|ABD72680.1| putative ribosomal protein S18 [Acyrthosiphon pisum] gi|239788236|dbj|BAH70806.1| ACYPI000081 [Acyrthosiphon pisum] gi|326493984|dbj|BAJ85454.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326522712|dbj|BAJ88402.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 152 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ A+ I GIG + S + K + +R + + EV +I + Sbjct: 12 ILRILSTNIDGKRKVMFAMTAIKGIGRRFSNIVLKKADVDLNKRAGECTDEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVVDGKFSQLTSSTLDSKLREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|56791633|gb|AAW30354.1| ribosomal protein S13 [Liriodendron tulipifera] Length = 109 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 65/107 (60%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G K+V A + GIG K + + +L I ++++L + ++ QI Q I QD+ Sbjct: 2 GARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHV 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 62 VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108 >gi|242211468|ref|XP_002471572.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R] gi|220729344|gb|EED83220.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ ++ I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTII 74 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQRDIVDGKNSQILSNSVDSKIRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax SaI-1] gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V AL I GIG + + IC + + +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + +++R+ + +RGLRH GL V Sbjct: 74 NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|195124097|ref|XP_002006530.1| GI21106 [Drosophila mojavensis] gi|193911598|gb|EDW10465.1| GI21106 [Drosophila mojavensis] Length = 158 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 18 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 77 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 78 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 137 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 138 RGQHTKTTGRRGRTV---GVSKKK 158 >gi|299751837|ref|XP_002911694.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130] gi|298409557|gb|EFI28200.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTII 74 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKNYQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|15218103|ref|NP_177898.1| 30S ribosomal protein S13, chloroplast, putative [Arabidopsis thaliana] gi|32363391|sp|Q9CA19|RT13_ARATH RecName: Full=Small ribosomal subunit protein S13, mitochondrial; Short=mS13; Flags: Precursor gi|12323293|gb|AAG51625.1|AC012193_7 putative 30S ribosomal protein S13; 38847-37703 [Arabidopsis thaliana] gi|33589778|gb|AAQ22655.1| At1g77750 [Arabidopsis thaliana] gi|332197896|gb|AEE36017.1| small ribosomal subunit protein S13 [Arabidopsis thaliana] Length = 154 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ +P K + L ++GIG + S + L I + L E+I +R+ + Q Sbjct: 33 RVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGI-TNKLARDLTGKELIDLREEVGQ 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +Q +LRR V I+RL+++ CYRG RHR GLP RGQRT TNART+K +K+ Sbjct: 92 -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKGKAVAIAGKKK 150 >gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi] gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I GIG + + IC + + P +R +L E+ I + Sbjct: 14 ILRVLNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + +++R+ + +RGLRH GL V Sbjct: 74 SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|307165872|gb|EFN60227.1| 40S ribosomal protein S18 [Camponotus floridanus] Length = 152 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I + Sbjct: 12 ILRVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++R+ + +RGLRH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|17136882|ref|NP_476964.1| ribosomal protein S18, isoform A [Drosophila melanogaster] gi|24656100|ref|NP_725943.1| ribosomal protein S18, isoform B [Drosophila melanogaster] gi|194881531|ref|XP_001974884.1| ribosomal protein S18 [Drosophila erecta] gi|195336052|ref|XP_002034661.1| ribosomal protein S18 [Drosophila sechellia] gi|195486935|ref|XP_002091713.1| ribosomal protein S18 [Drosophila yakuba] gi|195585039|ref|XP_002082302.1| ribosomal protein S18 [Drosophila simulans] gi|730637|sp|P41094|RS18_DROME RecName: Full=40S ribosomal protein S18 gi|349256|gb|AAA28870.1| ribosomal protein S18 [Drosophila melanogaster] gi|7302403|gb|AAF57491.1| ribosomal protein S18, isoform A [Drosophila melanogaster] gi|21626903|gb|AAM68401.1| ribosomal protein S18, isoform B [Drosophila melanogaster] gi|38047723|gb|AAR09764.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba] gi|38048391|gb|AAR10098.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba] gi|56201301|dbj|BAD72904.1| RpS18 [Drosophila simulans] gi|56201321|dbj|BAD72922.1| RpS18 [Drosophila sechellia] gi|90855595|gb|ABE01159.1| IP16603p [Drosophila melanogaster] gi|190658071|gb|EDV55284.1| ribosomal protein S18 [Drosophila erecta] gi|194126631|gb|EDW48674.1| ribosomal protein S18 [Drosophila sechellia] gi|194177814|gb|EDW91425.1| ribosomal protein S18 [Drosophila yakuba] gi|194194311|gb|EDX07887.1| ribosomal protein S18 [Drosophila simulans] Length = 152 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|170592174|ref|XP_001900844.1| 40S ribosomal protein S18 [Brugia malayi] gi|158591711|gb|EDP30315.1| 40S ribosomal protein S18, putative [Brugia malayi] Length = 154 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I RR +L E ++ +++Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKYSQMLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|312082633|ref|XP_003143525.1| 40S ribosomal protein S18 [Loa loa] gi|307761312|gb|EFO20546.1| 40S ribosomal protein S18 [Loa loa] Length = 154 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + +C K I RR +L E ++ +++Q ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++RL + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKYSQVLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|259482715|tpe|CBF77457.1| TPA: 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640) [Aspergillus nidulans FGSC A4] Length = 119 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P + V ++L G+G + S I ++ I +V +L +V+ + + Sbjct: 1 MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR V +IKRL + G YRG RH GLPVRGQRT N + + + Sbjct: 61 SE-MKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNR 114 >gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49] gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49] gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1] gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG] Length = 156 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++VV AL I GIG + S IC K I +R +L E+ ++ Sbjct: 14 ILRILNTNVDGREKVVVALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V L +++RL + +RGLRH GL V Sbjct: 74 STPQQFKIPTWFLNRQKDVKDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|6324248|ref|NP_014318.1| Sws2p [Saccharomyces cerevisiae S288c] gi|1730748|sp|P53937|SWS2_YEAST RecName: Full=37S ribosomal protein SWS2, mitochondrial; AltName: Full=Sick without securin protein 2 gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae] gi|1301975|emb|CAA95955.1| unnamed protein product [Saccharomyces cerevisiae] gi|71064119|gb|AAZ22527.1| Sws2p [Saccharomyces cerevisiae] gi|151944453|gb|EDN62731.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190409070|gb|EDV12335.1| hypothetical protein SCRG_03217 [Saccharomyces cerevisiae RM11-1a] gi|256270278|gb|EEU05496.1| Sws2p [Saccharomyces cerevisiae JAY291] gi|259149280|emb|CAY82522.1| Sws2p [Saccharomyces cerevisiae EC1118] gi|285814570|tpg|DAA10464.1| TPA: Sws2p [Saccharomyces cerevisiae S288c] gi|323335810|gb|EGA77089.1| Sws2p [Saccharomyces cerevisiae Vin13] Length = 143 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + + AL +GIG +++ IC+KL P R+HQL E +++ I + Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +EGD R V NI +G Y G+RH LPVRGQ T NA+T +K K Sbjct: 63 ST-MTIEGDARAIVKDNIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNK 116 >gi|33322096|gb|AAQ06768.1|AF496109_3 30s ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis] Length = 82 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KRVV AL YI+GIG ++++IC + + R L + ++R + Sbjct: 1 MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83 ++ Y+VEGDLRR V+MNIKRL+D Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVD 82 >gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01] gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01] gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18] Length = 155 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|312219643|emb|CBX99586.1| hypothetical protein [Leptosphaeria maculans] Length = 233 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ ++ I Sbjct: 92 IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 151 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 152 QNPLQYKIPAWFLNRQRDIVDGKNSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 211 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 212 RGQHSKTTGRRGRTV---GVSKKK 232 >gi|119175400|ref|XP_001239936.1| hypothetical protein CIMG_09557 [Coccidioides immitis RS] Length = 125 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 1 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T Sbjct: 61 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 104 >gi|33341152|gb|AAQ15137.1|AF355062_1 RPS13 [Dracaena sp. Quagliariello 16106] Length = 116 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 66/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+ ++V A I GIG K + + +L I ++++L + ++ + Q I Sbjct: 1 MLYISVSRSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDLLEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|66548968|ref|XP_625104.1| PREDICTED: 40S ribosomal protein S18 [Apis mellifera] Length = 152 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G NI ++V+ A+ I G+G + + + K I ++R + E EV +I + Sbjct: 12 ILRVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 71 Query: 61 EQDYQ--------------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V+G L + +++R+ + +RGLRH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLERMKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|297527615|ref|YP_003669639.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710] gi|297256531|gb|ADI32740.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710] Length = 157 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG +I + + V L I G+G + IC +L I PE R+ L + E+ +I + Sbjct: 16 IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 75 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +L V +I+R + +RG+RH GL V Sbjct: 76 SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 135 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R GV RKR Sbjct: 136 RGQRTRTTGRLGLTV---GVRRKR 156 >gi|11466637|ref|NP_066320.1| ribosomal protein S13 [Malawimonas jakobiformis] gi|10178675|gb|AAG13687.1|AF295546_13 ribosomal protein S13 [Malawimonas jakobiformis] Length = 126 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 76/111 (68%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G I + K + AL I+G+G+K++ ICN + I ++++ ++ +++ IR+ + Sbjct: 1 MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 Y++ GDLRR +++NIKR +D+ YRGLRH+ PVRGQRTHTNART+K Sbjct: 61 NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111 >gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480] gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480] Length = 155 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDINDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|307109786|gb|EFN58023.1| 40S ribosomal protein S18 [Chlorella variabilis] Length = 153 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + S C K + +R +L E+ I + Sbjct: 13 ILRVLNTNVDGKQKIMYALTAIKGIGRRFSNICCKKAEVDLNKRAGELSAEELESIMTIV 72 Query: 61 EQD--YQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Y++ L + +++RL + +RGLRH GL V Sbjct: 73 ANPRAYKIPDWFLNRQKDVKDGRYSQVTSSALDTKLRDDLERLKKIRNHRGLRHYWGLTV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GVA+K+ Sbjct: 133 RGQHTKTTGRRGKTV---GVAKKK 153 >gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H] gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H] Length = 156 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V AL I GIG + + IC + + +R +L E+ I + Sbjct: 14 ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + +++R+ + +RGLRH GL V Sbjct: 74 NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|57281956|emb|CAD19537.1| ribosomal protein S13 [Anthericum liliago] Length = 116 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A + GIG K + + +L I ++++L + ++ QI Q I Sbjct: 1 MLYISGARSVPDEQVTIASIKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+RH+ G PVRGQRTHTNA T +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPVRGQRTHTNAGTFRK 112 >gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893] gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893] Length = 155 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|311334520|emb|CBN08641.1| 40S ribosomal protein S18 [Microcosmus squamiger] Length = 152 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI+ NI ++++ A+ + G+G + S IC K + +R +L + E+ ++ + Sbjct: 12 ILRISNTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + + +R+ + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKFSQVLSNQLDNKLREDTERMKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|54039447|sp|Q962R1|RS18_SPOFR RecName: Full=40S ribosomal protein S18 gi|15213824|gb|AAK92187.1|AF400215_1 ribosomal protein S18 [Spodoptera frugiperda] gi|48958395|dbj|BAD23920.1| ribosomal protein S18 [Antheraea yamamai] gi|268306384|gb|ACY95313.1| ribosomal protein S18 [Manduca sexta] gi|315115383|gb|ADT80664.1| ribosomal protein S18 [Euphydryas aurinia] Length = 152 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ A+ I G+G + S + K I ++R + E EV +I + Sbjct: 12 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|170092941|ref|XP_001877692.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647551|gb|EDR11795.1| predicted protein [Laccaria bicolor S238N-H82] Length = 156 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTII 74 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKNSQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081] gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081] gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3] gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188] Length = 155 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|50344500|emb|CAH04336.1| S18e ribosomal protein [Cicindela campestris] Length = 152 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G NI ++V+ A+ I G+G + + + K + ++R + E EV +I + Sbjct: 12 ILRILGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++R+ + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|62989759|emb|CAD91272.1| mitochondrial ribosomal protein RPS13 [Disa tripetaloides] Length = 116 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSSISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|70909575|emb|CAJ17208.1| ribosomal protein S18e [Sphaerius sp. APV-2005] Length = 152 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ AL I GIG + S + K + ++R + E EV +I + Sbjct: 12 ILRIMNTNIEGNRKVMFALTAIKGIGRRYSNIVLKKADVDLDKRAGECSEEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q +L + +++R+ + +RG+RH GL V Sbjct: 72 QVPRQFKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|30141207|emb|CAD30286.1| ribosomal protein S13 [Fritillaria persica] Length = 116 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 70/112 (62%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V + + GIG K + + +L + + ++++L + ++ QI Q I Sbjct: 1 MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +LRR +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 GQDHLVHWELRRGSRADIERLIYISPYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|57281962|emb|CAD19540.1| ribosomal protein S13 [Ixiolirion tataricum] Length = 116 Score = 120 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 43/112 (38%), Positives = 68/112 (60%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + V A + GIG K + I +L I ++++L +S++ Q+ Q I Sbjct: 1 MSYISGARSVPDEEVRIASAKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERAHIERFISISRYRGIRHQDGSPLRGQRTHTNARTWRK 112 >gi|320037802|gb|EFW19739.1| 40S ribosomal protein S13 [Coccidioides posadasii str. Silveira] Length = 156 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 31 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T Sbjct: 91 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 134 >gi|255632414|gb|ACU16557.1| unknown [Glycine max] Length = 148 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 10/127 (7%) Query: 2 ARIAGVNI--------PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ +NI P KR+V AL +HGIG +Q I +L + + V L + E+ Sbjct: 24 VRVQNINIGGGVGGEIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKREL 82 Query: 54 IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 IR+ + + Y + DL++ V ++ RL+ + CYRG+RH LP RGQRTHTNARTR+ Sbjct: 83 HSIRELLSK-YLIGNDLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSR 141 Query: 114 GKGGVAR 120 +R Sbjct: 142 KTFSGSR 148 >gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371] gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517] gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892] gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371] gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517] gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892] gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818] Length = 155 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|73667630|ref|YP_303645.1| 30S ribosomal protein S13P [Methanosarcina barkeri str. Fusaro] gi|91207705|sp|Q46GC7|RS13_METBF RecName: Full=30S ribosomal protein S13P gi|72394792|gb|AAZ69065.1| SSU ribosomal protein S13P [Methanosarcina barkeri str. Fusaro] Length = 162 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 RI ++ AK V AL + GIG +++ I + P + L + EV ++ +AI Sbjct: 24 VRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAIG 83 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + + D+ T +I L + YRGLRH RGL VRG Sbjct: 84 NFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+R++ Sbjct: 144 QRTKSTGRRGSTV---GVSRRK 162 >gi|32363341|sp|Q8LPW2|RT13_SOYBN RecName: Full=Small ribosomal subunit protein S13, mitochondrial; Flags: Precursor gi|20977547|gb|AAK94674.1| ribosomal protein S13 [Glycine max] Length = 148 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 10/127 (7%) Query: 2 ARIAGVNI--------PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ +NI P KR+V AL +HGIG +Q I +L + + V L + E+ Sbjct: 24 VRVQNINIGGGVGGEIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKREL 82 Query: 54 IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 IR+ + + Y + DL++ V ++ RL+ + CYRG+RH LP RGQRTHTNARTR+ Sbjct: 83 YSIRELLSK-YLIGNDLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSR 141 Query: 114 GKGGVAR 120 +R Sbjct: 142 KTFSGSR 148 >gi|195380645|ref|XP_002049081.1| ribosomal protein S18 [Drosophila virilis] gi|194143878|gb|EDW60274.1| ribosomal protein S18 [Drosophila virilis] Length = 152 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|50303317|ref|XP_451600.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640732|emb|CAH01993.1| KLLA0B01562p [Kluyveromyces lactis] Length = 146 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ VV AL I G+G + + +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNINVVYALTTIRGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRSHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|302789830|ref|XP_002976683.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii] gi|300155721|gb|EFJ22352.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii] Length = 152 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++KR Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152 >gi|215400753|ref|YP_002327514.1| ribosomal protein S13 [Vaucheria litorea] gi|194441203|gb|ACF70931.1| ribosomal protein S13 [Vaucheria litorea] Length = 126 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 84/126 (66%), Gaps = 4/126 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56 M R+ G+++P+ K + AL I+GIG +++I +K+ + + +V L ++ + + Sbjct: 1 MVRLIGIDLPKGKYINYALTSIYGIGISRAEEILSKIGLDKFSIKKLKVEDLSDTNISAL 60 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 R+ +E +YQ+EGDLRR ++N+KRLM++G +G RHR GLPVRGQRT TNARTR+ K Sbjct: 61 RKILEDEYQLEGDLRRLKSLNLKRLMEIGSIKGRRHRVGLPVRGQRTRTNARTRRGTKKT 120 Query: 117 GVARKR 122 +K+ Sbjct: 121 VAGKKK 126 >gi|56791629|gb|AAW30352.1| ribosomal protein S13 [Eichhornia crassipes] Length = 110 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 66/107 (61%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G ++V A I GIG K + + +L I ++++L + ++ Q+ Q I+QD+ Sbjct: 3 GARSVPDEQVRIASTKIDGIGPKKAIQLRYRLGISGNIKINELTKYQIDQMEQMIDQDHF 62 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 63 VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTSRK 109 >gi|212537637|ref|XP_002148974.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224] gi|210068716|gb|EEA22807.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224] Length = 119 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P ++ L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLQTFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + ++E DLRR + +IKRL D G YRG RH GLPVRGQ T + +T K Sbjct: 61 SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115 >gi|125809258|ref|XP_001361051.1| GA21399 [Drosophila pseudoobscura pseudoobscura] gi|195154539|ref|XP_002018179.1| GL16906 [Drosophila persimilis] gi|54636224|gb|EAL25627.1| GA21399 [Drosophila pseudoobscura pseudoobscura] gi|194113975|gb|EDW36018.1| GL16906 [Drosophila persimilis] Length = 152 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 TNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|50344502|emb|CAH04337.1| S18e ribosomal protein [Dascillus cervinus] Length = 152 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G NI ++V+ AL I G+G + + + K + ++R + E EV +I + Sbjct: 12 ILRIMGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71 Query: 61 EQDYQ--------------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V+G L + ++ R+ + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLGRMKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|324309721|gb|ADY18502.1| ribosomal protein S13 [Phaeodactylum tricornutum] Length = 116 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G +P K + +L Y +GIG +S +C KL +V L + + ++ + + Sbjct: 1 MVYLFGSELPDNKSIFFSLRYAYGIGKGNSSSLCKKLGFSKNLKVRNLSKEHINKLIKIM 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 E +V GDL+++ + K L + YRGLR +GLPVRGQRTHTNART +K Sbjct: 61 EVLKIEVAGDLKKSKLLISKTLASIKSYRGLRKNQGLPVRGQRTHTNARTARK 113 >gi|30141209|emb|CAD30287.1| ribosomal protein S13 [Veratrum latifolium] Length = 114 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A I GIG + +L I ++++L + ++ ++ + I Sbjct: 1 MSYISGARLVPDEQVRIASTKIDGIGPT--IQVRYRLGISGNIKINELTKYQIDKMEEII 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 59 GQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTFRK 110 >gi|302416813|ref|XP_003006238.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum VaMs.102] gi|261355654|gb|EEY18082.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum VaMs.102] Length = 119 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G SQ I K +I P +V L + + + Sbjct: 1 MVFILGVNFSEQKLVKKALESFYALGPSVSQRILAKYSIHPWAKVGSLAPKTITSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +E D ++ + NI+RL D+G YRG RH LP RGQRT T T KK + V R Sbjct: 61 S-VMTIENDAKKVLRENIQRLKDMGSYRGRRHAMNLPARGQRTRTQIETAKKLNR--VDR 117 Query: 121 KR 122 KR Sbjct: 118 KR 119 >gi|224365646|ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera] gi|209954170|emb|CAQ77617.1| ribosomal protein S13 [Vitis vinifera] gi|239764761|gb|ACS15230.1| ribosomal protein S13 [Vitis vinifera] Length = 116 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+RL+ + YRG+ H+ G P+RGQRTHTNART +K Sbjct: 61 GQDHVVHWELKRGERADIERLISISRYRGICHQDGSPLRGQRTHTNARTCRK 112 >gi|302680575|ref|XP_003029969.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8] gi|300103660|gb|EFI95066.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8] Length = 156 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R +L E+ +I + Sbjct: 15 ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 61 E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +DYQ+ + + +++RL + +RGLRH GL V Sbjct: 75 QNPTQFKIPTWFLNRQKDIVDGKDYQILSNGIDSKLRDDLERLKKIRAHRGLRHYWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|217075242|gb|ACJ85981.1| unknown [Medicago truncatula] Length = 152 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + + C K + +R +L +E+ I + Sbjct: 12 ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|126465712|ref|YP_001040821.1| 30S ribosomal protein S13P [Staphylothermus marinus F1] gi|158706279|sp|A3DMQ3|RS13_STAMF RecName: Full=30S ribosomal protein S13P gi|126014535|gb|ABN69913.1| SSU ribosomal protein S13P [Staphylothermus marinus F1] Length = 151 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG +I + + V L I G+G + IC +L I PE R+ L + E+ +I + Sbjct: 10 IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 69 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +L V +I+R + +RG+RH GL V Sbjct: 70 SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 129 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R GV +KR Sbjct: 130 RGQRTRTTGRLGLTV---GVRKKR 150 >gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS] gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735 delta SOWgp] gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735 delta SOWgp] gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira] Length = 155 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K + +R ++ E+ +I I Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITTEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + ++ + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|21392218|gb|AAM48463.1| RH43343p [Drosophila melanogaster] Length = 152 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|255628659|gb|ACU14674.1| unknown [Glycine max] Length = 152 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + S C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGIGRRFSNICCKKADVDMNKRAGELSAAELDSVMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQLKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|149234674|ref|XP_001523216.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239] gi|146453005|gb|EDK47261.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239] Length = 145 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + S +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|164429137|ref|XP_956794.2| 40S ribosomal protein S18 [Neurospora crassa OR74A] gi|157072424|gb|EAA27558.2| 40S ribosomal protein S18 [Neurospora crassa OR74A] gi|289618437|emb|CBI55161.1| unnamed protein product [Sordaria macrospora] Length = 156 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV +L I G+G + S +C K + +R +L E+ +I + Sbjct: 14 ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIM 73 Query: 61 EQD--------------YQVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|126136941|ref|XP_001384994.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054] gi|126092216|gb|ABN66965.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054] Length = 145 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVDLTKRAGELTQEELERIVTIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTNYKVPAWFLNRQKDHVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|302755154|ref|XP_002961001.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii] gi|302767174|ref|XP_002967007.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii] gi|300164998|gb|EFJ31606.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii] gi|300171940|gb|EFJ38540.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii] Length = 113 Score = 119 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 38/100 (38%), Positives = 62/100 (62%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 K V AL I+G+G + + +IC I + +++ + + ++ I +++ VE +L Sbjct: 2 NKAVKFALPRIYGVGRRKAAEICAVFGIGDDVKMNSVPDELFNRMMNYIHENHLVEKELA 61 Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 +V M+IKRL+ +G YRG RH GLP+RGQRTHTNA + + Sbjct: 62 LSVQMDIKRLISIGSYRGYRHTVGLPLRGQRTHTNAMSAR 101 >gi|296040615|gb|ADG85275.1| ribosomal protein S13 [Silene noctiflora] Length = 116 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 71/112 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G + K+V AL I GIG K + +L + ++ +L + ++ +I + I Sbjct: 1 MPYISGARLVDDKQVKIALTKISGIGRKKGLQLSARLGLSENIKIKELTKYQIDKIEEII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 EQ++ V +L+R+ +I RL+ + CYRG+RH+ GLP+RGQR+HTNART +K Sbjct: 61 EQEHIVHWELKRSERTDIDRLISISCYRGIRHQDGLPLRGQRSHTNARTSRK 112 >gi|169602162|ref|XP_001794503.1| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15] gi|160706096|gb|EAT89165.2| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15] Length = 163 Score = 119 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 1/122 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G N A V R+L GIG K SQ + K I P +V L + V+++ + Sbjct: 1 MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 + ++E DLRR V NI+RL D+G YRG RH GLPVRGQRT T T +K KG R Sbjct: 61 S-NMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNKGRTRR 119 Query: 121 KR 122 R Sbjct: 120 PR 121 >gi|195431724|ref|XP_002063878.1| ribosomal protein S18 [Drosophila willistoni] gi|194159963|gb|EDW74864.1| ribosomal protein S18 [Drosophila willistoni] Length = 152 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 72 TNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata] gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata] Length = 154 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV AL I G+G + + +C + + +R +L + E+ ++ I Sbjct: 14 ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTQDEINKLVAII 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + L + +++RL + +RGLRH GL Sbjct: 74 SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|112984000|ref|NP_001037269.1| ribosomal protein S18 [Bombyx mori] gi|49532882|dbj|BAD26676.1| Ribosomal protein S18 [Plutella xylostella] gi|54609321|gb|AAV34876.1| ribosomal protein S18 [Bombyx mori] Length = 152 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ A+ I G+G + S + K I ++R + E EV +I + Sbjct: 12 ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|260945795|ref|XP_002617195.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] gi|238849049|gb|EEQ38513.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720] Length = 121 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G +I V L I G+G+ ++Q IC K+ I P R++QL E +++ I + + Sbjct: 3 VHIFGKSIKHNALVRIGLAKRIFGVGYTTAQQICAKVGIYPRMRMNQLTEPQIMAINKEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D +EG L++ + NI++ ++G Y G RH GLPVRGQRT NA T K+ + Sbjct: 63 S-DLTIEGHLKQRILENIQQKKEIGSYAGNRHAAGLPVRGQRTRNNASTAKRLNR 116 >gi|217071380|gb|ACJ84050.1| unknown [Medicago truncatula] Length = 152 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + + C K + +R +L +E+ I + Sbjct: 12 ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTVAELENIMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|189208913|ref|XP_001940789.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976882|gb|EDU43508.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 155 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ +I I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154 >gi|327400269|ref|YP_004341108.1| 30S ribosomal protein S13P [Archaeoglobus veneficus SNP6] gi|327315777|gb|AEA46393.1| ribosomal protein S13P [Archaeoglobus veneficus SNP6] Length = 147 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 23/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K V+ AL I GIG + ++ I + L I +++ ++ + + ++R+ + Sbjct: 7 IVRIADTDLDGSKSVMFALTGIKGIGLRMAKSIVSALGIDGRQKLGEMDDETIEKLRKFV 66 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E+D + + D+ ++I+ ++ + CYRG+RH RG VR Sbjct: 67 EEDIESLPSWLLNRRKDPHTGKDLHLLSKDVDFAKMVDIETMIRMKCYRGIRHARGKKVR 126 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R+ + G + RK+ Sbjct: 127 GQRTRSTGRSGRTVG--VIRRKK 147 >gi|330932805|ref|XP_003303916.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1] gi|311319761|gb|EFQ87978.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1] Length = 155 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ ++ I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154 >gi|303314875|ref|XP_003067446.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107114|gb|EER25301.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides posadasii C735 delta SOWgp] Length = 149 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GV+ P + V ++L G+G + + + P R+ L +V+ I A+ Sbjct: 31 MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 + ++E DLRR + NI+RL D G YRG RH LPVRGQRT T +T K Sbjct: 91 S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRTQTKTAIKLN 143 >gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga] gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva] Length = 154 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++VV AL I G+G + + +C + + +R +L + E+ ++ I Sbjct: 14 ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDITKRAGELTQDEINKLVAII 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + L + +++RL + +RGLRH GL Sbjct: 74 SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154 >gi|292656901|ref|YP_003536798.1| 30S ribosomal protein S13 [Haloferax volcanii DS2] gi|291370341|gb|ADE02568.1| ribosomal protein S13 [Haloferax volcanii DS2] Length = 167 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 21/133 (15%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI ++ K V R+L + GIG ++++ I + + +L E E+ + +E Sbjct: 22 RIGQTDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDAVVDVVEN 81 Query: 63 ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 D+ DL +I R+ + Y+G+RH+RG VRGQ Sbjct: 82 FEDHAPEWMANRRKDFFSGDTDHITGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141 Query: 102 RTHTNARTRKKFG 114 RT + RT G Sbjct: 142 RTKSTGRTEGTIG 154 >gi|242808625|ref|XP_002485205.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500] gi|218715830|gb|EED15252.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500] Length = 119 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P V ++L GIG S + + I P ++ L +V+ I A+ Sbjct: 1 MVFILGVNFPERNLVKKSLETFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + ++E DLRR + +IKRL D G YRG RH GLPVRGQ T + +T K Sbjct: 61 SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115 >gi|171185873|ref|YP_001794792.1| 30S ribosomal protein S13P [Thermoproteus neutrophilus V24Sta] gi|170935085|gb|ACB40346.1| ribosomal protein S13 [Thermoproteus neutrophilus V24Sta] Length = 153 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I GIG ++ IC KL I P + L + ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYALAKIRGIGIATAYAICWKLGIDPHAVLGMLTDDQINKLDWAV 67 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + +L ++ + L ++G+RH GL VR Sbjct: 68 RNLNELAPAWFLNRRKDPETGRELHLIGSELVLAAKKDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GV +K+ Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147 >gi|321458683|gb|EFX69747.1| hypothetical protein DAPPUDRAFT_300691 [Daphnia pulex] Length = 152 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRILNTNIDGKIKIMFAVTSIKGVGRRYANVVLKKADIDLTKRAGELSEEEVEKLITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQYKIPDWFLNRQKDIKDGKFSQVTSNMLENKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|45190917|ref|NP_985171.1| AER315Cp [Ashbya gossypii ATCC 10895] gi|44983985|gb|AAS52995.1| AER315Cp [Ashbya gossypii ATCC 10895] Length = 146 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + + IC K + +R +L + E+ ++ Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|313103638|pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gi|22204120|gb|AAM92708.1| putative ribosomal protein S18 [Triticum aestivum] Length = 152 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + S +C K I +R +L E+ ++ + Sbjct: 12 ILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V + + +++RL + +RGLRH G+ V Sbjct: 72 HNPRQFKVPDWFLNRKKDYKDGRFSQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|169598492|ref|XP_001792669.1| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15] gi|160704404|gb|EAT90262.2| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15] Length = 155 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R L E+ +I I Sbjct: 14 IIRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLGKRAGDLTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPLQYKIPSWFLNRQRDIVDGKNSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154 >gi|170056800|ref|XP_001864194.1| 30S ribosomal protein S13P [Culex quinquefasciatus] gi|167876481|gb|EDS39864.1| 30S ribosomal protein S13P [Culex quinquefasciatus] Length = 152 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q ++ + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|154316255|ref|XP_001557449.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gi|156037576|ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gi|150846499|gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gi|154697910|gb|EDN97648.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70] Length = 156 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVEGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQVLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ + T R + GV++K+ Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154 >gi|328852742|gb|EGG01885.1| hypothetical protein MELLADRAFT_91715 [Melampsora larici-populina 98AG31] Length = 156 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + C K + +R +L E+ +I I Sbjct: 15 ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 74 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPNWFLNRQRDIVDGKSFQVLSNGLDSKMREDLERLKKIRAHRGLRHYWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155 >gi|62989829|emb|CAD91307.1| mitochondrial ribosomal protein RPS13 [Wullschlaegelia calcarata] Length = 116 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 44/112 (39%), Positives = 69/112 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + +L I ++++L + ++ Q+ Q I Sbjct: 1 MSYISGARSVPDEQVRIASKKMDGIGPKKAIQVRYRLGIRGNIKMNELTKPQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +IKRL+ L YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHFVHWELKRGERADIKRLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|157124077|ref|XP_001660320.1| 40S ribosomal protein S18 [Aedes aegypti] gi|94468520|gb|ABF18109.1| ribosomal protein S18 [Aedes aegypti] gi|108874121|gb|EAT38346.1| 40S ribosomal protein S18 [Aedes aegypti] Length = 152 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + E EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSEEEVEKIVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q ++ + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|194397653|ref|YP_002036933.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54] gi|194357320|gb|ACF55768.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54] Length = 101 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 27 FKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGC 86 +S+ I I + RV L + IR+ ++ +VEGDLRR V +NIKRLM++G Sbjct: 7 LATSKKILAAAGISEDVRVRDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGS 65 Query: 87 YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 YRG+RHRRGLPVRGQ T NARTRK +K+ Sbjct: 66 YRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 101 >gi|288931231|ref|YP_003435291.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642] gi|288893479|gb|ADC65016.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642] Length = 147 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K +V AL I GIG + ++ I N L + ++ L + E+ ++++ + Sbjct: 7 IVRIADTDLDGNKPLVHALTGIKGIGLRMARAITNHLGLNAREKLGNLSDEEIEKLKKFV 66 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E++ + + D+ ++I+RL+ + YRG+RH +G VR Sbjct: 67 EENIEELPSWMLNRRKDLYTGKDLHLLGKDVDLAKKLDIERLIKIRAYRGIRHAKGYKVR 126 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + RT + GV R++ Sbjct: 127 GQRTRSTGRTGQTV---GVQRRK 146 >gi|56791627|gb|AAW30351.1| ribosomal protein S13 [Calycanthus floridus] Length = 109 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 65/107 (60%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G ++V A + GIG K + + +L I ++++L + ++ QI Q I QD+ Sbjct: 2 GARSVPDEKVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHV 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 62 VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108 >gi|255629171|gb|ACU14930.1| unknown [Glycine max] Length = 152 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I GIG + + C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|209880283|ref|XP_002141581.1| 40S ribosomal protein S18 [Cryptosporidium muris RN66] gi|209557187|gb|EEA07232.1| 40S ribosomal protein S18, putative [Cryptosporidium muris RN66] Length = 153 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V+ AL I GIG + S +C K + +R QL + EV +I + Sbjct: 13 ILRIMNTNVDGRQKVMYALTAIKGIGRRFSNIVCKKADVDLRKRAGQLTQDEVNRIVAIV 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +L ++ +++RL + +RGLRH G+ V Sbjct: 73 TNPLQFNIPSYMLNRQRDLKDGKYKHMTSNNLEASLREDLERLKKIRSHRGLRHHWGIRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + +K+ Sbjct: 133 RGQHTKTTGRGCR---VASSGKKK 153 >gi|253795633|ref|YP_003038729.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia cicadicola Dsem] gi|253739941|gb|ACT34276.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia cicadicola Dsem] Length = 118 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 48/104 (46%), Positives = 62/104 (59%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 +P K+V AL +HG+G + + LA+P R QL + I + +E + VE Sbjct: 2 ELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVVE 61 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 G LR V +I +L +GCYRGLRHR GLPVRGQRT TNA TRK Sbjct: 62 GGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105 >gi|61654738|gb|AAX48895.1| S18 [Suberites domuncula] Length = 152 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ L I G+G + + + K + +R +L E E+ ++ + Sbjct: 12 ILRVLNTNIDGHQKIMFGLTAIKGVGRRYANLVLKKADVDMNKRAGELSEEEIERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G+ V Sbjct: 72 QNPRQYKIPDWFLNRQKDHRDGKYSQILANQLEHKLREDLERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|168004052|ref|XP_001754726.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694347|gb|EDQ80696.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKVPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++KR Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152 >gi|168024894|ref|XP_001764970.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683779|gb|EDQ70186.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++KR Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152 >gi|301117146|ref|XP_002906301.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4] gi|262107650|gb|EEY65702.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4] Length = 152 Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V AL I G+G + S +C K + +R +L E+ ++ I Sbjct: 12 ILRILNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDVTKRAGELTNDEIERVVAII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V +L+ + +RL + +RGLRH GL V Sbjct: 72 QNPLQFKIPVWFLNRQKDFKTGKHSQVVANNLQGKWREDYERLKKIYAHRGLRHWWGLKV 131 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 132 RGQHTKTTGRRGRTVG 147 >gi|56791637|gb|AAW30356.1| ribosomal protein S13 [Platanus occidentalis] Length = 108 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 64/107 (59%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G ++V A + GIG K + + +L I ++ +L + ++ QI Q I QD+ Sbjct: 2 GARSVPDEQVRIASTKMDGIGPKKAIQVRYQLGISGNIKIRELTKYQIDQIEQMIGQDHV 61 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 62 VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 108 >gi|41615251|ref|NP_963749.1| 30S ribosomal protein S13P [Nanoarchaeum equitans Kin4-M] gi|74579692|sp|Q74M95|RS13_NANEQ RecName: Full=30S ribosomal protein S13P gi|40068975|gb|AAR39310.1| NEQ467 [Nanoarchaeum equitans Kin4-M] Length = 153 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + IA V++ K + L + G+ + + +C L I R++ L + E+ ++ A+ Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V D + T+ +IKR M + +RG RHR GLPV Sbjct: 73 RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT ++ R + GV +K+ Sbjct: 133 RGQRTRSHHRKGRTV---GVIKKK 153 >gi|168049335|ref|XP_001777119.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671562|gb|EDQ58112.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDHKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++KR Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152 >gi|67528950|ref|XP_662072.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4] gi|40741043|gb|EAA60233.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4] Length = 130 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN P + ++L G+G + S I ++ I +V +L +V+ + + Sbjct: 1 MVFILGVNFPEGQL--KSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + ++E DLRR V +IKRL + G YRG RH GLPVRGQRT N + + + Sbjct: 59 SE-MKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNRA 113 >gi|255629053|gb|ACU14871.1| unknown [Glycine max] Length = 152 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I GIG + + C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELSAAELDSVMTVV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|195057283|ref|XP_001995231.1| GH23036 [Drosophila grimshawi] gi|193899437|gb|EDV98303.1| GH23036 [Drosophila grimshawi] Length = 162 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 22 ILRIMSTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 81 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q +L + +++RL + +RGLRH GL V Sbjct: 82 SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 141 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 142 RGQHTKTTGRRGRTV---GVSKKK 162 >gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata] Length = 154 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + + K + +R +L + EV + I Sbjct: 12 ILRVMNTNIDGRIKIMYALTAIKGVGRRYANLVLKKADVDLRKRAGELTDEEVEAVVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++RL + +RGLRH GL V Sbjct: 72 NNPKQYKIPNWFLNRQKDIKDGKYMQVTSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|328767380|gb|EGF77430.1| hypothetical protein BATDEDRAFT_91663 [Batrachochytrium dendrobatidis JAM81] Length = 165 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I GIG + + + K I +R ++ E+ ++ + Sbjct: 24 IIRLLNTNIDGKRKIMYALTSIKGIGRRYANLVLKKADIDLNKRAGEVTNDELERVVTIM 83 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G+ V Sbjct: 84 QNPRQYKIPDWFLNRQKDIKDGKYTQVIANALDNKLREDLERLKKIRAHRGLRHYWGVRV 143 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 144 RGQHTKTTGRRGRTV---GVSKKK 164 >gi|118431572|ref|NP_148134.2| 30S ribosomal protein S13P [Aeropyrum pernix K1] gi|32363509|sp|Q9YB60|RS13_AERPE RecName: Full=30S ribosomal protein S13P gi|116062897|dbj|BAA80738.2| 30S ribosomal protein S13P [Aeropyrum pernix K1] Length = 150 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAGV+I ++ L I GIG+ ++ + L + PE++V L E E+ ++ + + Sbjct: 10 IVRIAGVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVL 69 Query: 61 ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY+ DL +I+R M +G +RG+RH+ GL V Sbjct: 70 RDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYGLKV 129 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R GV +KR Sbjct: 130 RGQRTRTTGRLGMTI---GVRKKR 150 >gi|56791631|gb|AAW30353.1| ribosomal protein S13 [Laurus nobilis] Length = 115 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 40/107 (37%), Positives = 65/107 (60%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G ++V A + GIG K + + +L I ++++L + ++ Q+ Q I QD+ Sbjct: 6 GARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMIGQDHV 65 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 V +L+R +I+RL+ + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 66 VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112 >gi|116783572|gb|ABK23001.1| unknown [Picea sitchensis] gi|116784761|gb|ABK23462.1| unknown [Picea sitchensis] gi|116785907|gb|ABK23903.1| unknown [Picea sitchensis] gi|116790495|gb|ABK25635.1| unknown [Picea sitchensis] gi|116792192|gb|ABK26268.1| unknown [Picea sitchensis] gi|116792691|gb|ABK26459.1| unknown [Picea sitchensis] gi|116793924|gb|ABK26933.1| unknown [Picea sitchensis] gi|148907687|gb|ABR16972.1| unknown [Picea sitchensis] gi|148908291|gb|ABR17259.1| unknown [Picea sitchensis] gi|224284844|gb|ACN40152.1| unknown [Picea sitchensis] Length = 152 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKRAGELTALELENLMIIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPKQFKIPDWFLNRQKDIKDGRTTQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|124027412|ref|YP_001012732.1| 30S ribosomal protein S13P [Hyperthermus butylicus DSM 5456] gi|158706239|sp|A2BK76|RS13_HYPBU RecName: Full=30S ribosomal protein S13P gi|123978106|gb|ABM80387.1| 30S ribosomal protein S13p [Hyperthermus butylicus DSM 5456] Length = 151 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP +V L + GIG + +C L I P +R+ L ++E+ +I +A+ Sbjct: 10 IVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAM 69 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R + +RG+RH GL V Sbjct: 70 ANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKV 129 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT T R G Sbjct: 130 RGQRTATTGRIGMTIG 145 >gi|119872422|ref|YP_930429.1| 30S ribosomal protein S13P [Pyrobaculum islandicum DSM 4184] gi|158706269|sp|A1RT04|RS13_PYRIL RecName: Full=30S ribosomal protein S13P gi|119673830|gb|ABL88086.1| SSU ribosomal protein S13P [Pyrobaculum islandicum DSM 4184] Length = 153 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V +L I GIG ++ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++ + +L ++ + L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGKDLHLIGAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GV +K+ Sbjct: 128 GQRTVTTGRLG---PVAGVTKKK 147 >gi|91772118|ref|YP_564810.1| 30S ribosomal protein S13P [Methanococcoides burtonii DSM 6242] gi|121684548|sp|Q12ZR6|RS13_METBU RecName: Full=30S ribosomal protein S13P gi|91711133|gb|ABE51060.1| SSU ribosomal protein S13P [Methanococcoides burtonii DSM 6242] Length = 148 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 RI ++ K V AL I GIG ++S+ I + I P + L + ++ ++ I Sbjct: 10 VRIMNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTID 69 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + + D+ T+ ++ L YRGLRH RGL VRG Sbjct: 70 KFEEQLPKWMLNRQFDPLTGENKHLLGQDIILTLKEDLNDLKKSRAYRGLRHERGLKVRG 129 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV +K+ Sbjct: 130 QRTKSTGRRGSTI---GVRKKK 148 >gi|124783098|gb|ABN14904.1| ribosomal protein S18 [Taenia asiatica] Length = 152 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 12 ILRVMNTNIDGQRKITYALTAIKGVGRRYATVVCKKADVDIRKRAGELTDDEIEKIVTVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQYKIPNWFLNRQKDIEDGKHTQLLAQGLDSKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|213406555|ref|XP_002174049.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|213409073|ref|XP_002175307.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|212002096|gb|EEB07756.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] gi|212003354|gb|EEB09014.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275] Length = 152 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I G+G + + C K + +R +L E+ ++ + Sbjct: 12 ILRLLNTNVDGKNKVMYALTQIKGVGRRYANIACKKADVDMSKRAGELTTEELERLVTIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + ++ + +++RL + +RGLRH L V Sbjct: 72 QNPTQFKIPAWFLNRQKDITDGKSYQLLANNVDSKLRDDLERLKKIQAHRGLRHALDLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++K+ Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKK 152 >gi|50288491|ref|XP_446675.1| hypothetical protein [Candida glabrata CBS 138] gi|49525983|emb|CAG59602.1| unnamed protein product [Candida glabrata] Length = 147 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + + +C K + +R +L + E+ ++ Q + Sbjct: 15 ILRLLNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 74 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + +++RL + +RG+RH GL V Sbjct: 75 QNPTQYKIPAWFLNRQRDIADGKDYHTLANQVESKLRDDLERLKKIRAHRGIRHFWGLRV 134 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 135 RGQHTKTTGRRR 146 >gi|254582072|ref|XP_002497021.1| ZYRO0D13574p [Zygosaccharomyces rouxii] gi|238939913|emb|CAR28088.1| ZYRO0D13574p [Zygosaccharomyces rouxii] Length = 146 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +VV AL I G+G + + +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLSKRAGELTQEELERIVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + +++RL + +RG+RH GL V Sbjct: 74 QNPTQYKIPTWFLSRQKDVNDGKDHHMLANGVESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRKR 145 >gi|168004046|ref|XP_001754723.1| predicted protein [Physcomitrella patens subsp. patens] gi|168049271|ref|XP_001777087.1| predicted protein [Physcomitrella patens subsp. patens] gi|168052464|ref|XP_001778670.1| predicted protein [Physcomitrella patens subsp. patens] gi|162669988|gb|EDQ56565.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671530|gb|EDQ58080.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694344|gb|EDQ80693.1| predicted protein [Physcomitrella patens subsp. patens] Length = 152 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I G+G + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++KR Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152 >gi|39941500|ref|XP_360287.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15] gi|59802871|gb|AAX07649.1| 40S ribosomal protein S18-like protein [Magnaporthe grisea] gi|145022352|gb|EDK06372.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15] Length = 156 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++V AL I G+G + S + K + +R +L E+ ++ + Sbjct: 14 ILRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTIL 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPSWFLNRQRDIVDGKDSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|6320658|ref|NP_010738.1| Rps18ap [Saccharomyces cerevisiae S288c] gi|6323615|ref|NP_013686.1| Rps18bp [Saccharomyces cerevisiae S288c] gi|1350951|sp|P35271|RS18_YEAST RecName: Full=40S ribosomal protein S18 gi|313103676|pdb|3IZB|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome gi|315113459|pdb|3O2Z|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The First 80s In The Asymmetric Unit. gi|315113487|pdb|3O30|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit Of The Second 80s In The Asymmetric Unit. gi|575693|emb|CAA86629.1| unnamed protein product [Saccharomyces cerevisiae] gi|927725|gb|AAB64891.1| Ydr450wp [Saccharomyces cerevisiae] gi|151942415|gb|EDN60771.1| ribosomal protein S18A [Saccharomyces cerevisiae YJM789] gi|151946135|gb|EDN64366.1| ribosomal protein S18B [Saccharomyces cerevisiae YJM789] gi|190408214|gb|EDV11479.1| ribosomal protein S18A [Saccharomyces cerevisiae RM11-1a] gi|259145683|emb|CAY78947.1| Rps18ap [Saccharomyces cerevisiae EC1118] gi|259148549|emb|CAY81794.1| Rps18bp [Saccharomyces cerevisiae EC1118] gi|285811461|tpg|DAA12285.1| TPA: Rps18ap [Saccharomyces cerevisiae S288c] gi|285813977|tpg|DAA09872.1| TPA: Rps18bp [Saccharomyces cerevisiae S288c] Length = 146 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + ++ + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|47570247|ref|ZP_00240898.1| ribosomal protein S13p/S18e [Bacillus cereus G9241] gi|47553071|gb|EAL11471.1| ribosomal protein S13p/S18e [Bacillus cereus G9241] Length = 97 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 1/93 (1%) Query: 30 SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89 ++ I + I E RV L E E+ +IR I++ +VEGDLRR V++NIKRLM++G YRG Sbjct: 6 AEKILAEAGISEETRVRDLTEDELGRIRDIIDR-IKVEGDLRREVSLNIKRLMEIGSYRG 64 Query: 90 LRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 LRHRRGLPVRGQ + NARTRK + +K+ Sbjct: 65 LRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 97 >gi|19113298|ref|NP_596506.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-] gi|162312104|ref|NP_588057.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe 972h-] gi|6831658|sp|O94754|RS18_SCHPO RecName: Full=40S ribosomal protein S18 gi|4481957|emb|CAB38515.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe] gi|157310505|emb|CAB58414.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe] Length = 152 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ A+ I G+G + + +C K I +R +L E+ +I I Sbjct: 12 ILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + ++ + +++RL + +RGLRH L V Sbjct: 72 QNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++K+ Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKK 152 >gi|297842551|ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp. lyrata] gi|297334998|gb|EFH65416.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp. lyrata] Length = 154 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ +P + L ++GIG + S + L I + L E+I +R+ + Q Sbjct: 33 RVGNAEVPNNMPLKTGLQAVYGIGRRKSHQVLCHLGI-TNKLARDLTGKELIDLREEVGQ 91 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +Q +LRR V I+RL+++ CYRG RHR G+P RGQRT TNART+K +K+ Sbjct: 92 -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKAVAIAGKKK 150 >gi|58259960|ref|XP_567390.1| ribosomal protein S18 [Cryptococcus neoformans var. neoformans JEC21] gi|134116184|ref|XP_773263.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255885|gb|EAL18616.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229440|gb|AAW45873.1| ribosomal protein S18, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 155 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + +C K + +R +L E+ +I + Sbjct: 15 ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + + +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPSWFLNRQRDISDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + G+ +K+ Sbjct: 135 RGQHTKTTGR---RVGRAVAGKKK 155 >gi|282164925|ref|YP_003357310.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE] gi|282157239|dbj|BAI62327.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE] Length = 225 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 RI ++ +V+ AL I GIG + S+ + K + P + L +V ++R A+ Sbjct: 72 VRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNALE 131 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + DL + +I + + Y+G+RH RG VRG Sbjct: 132 NIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVRG 191 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + RT GV RK+ Sbjct: 192 QRTRSTGRTGATV---GVVRKK 210 >gi|159145688|gb|ABW90381.1| putative ribosomal protein S18 [Sipunculus nudus] Length = 152 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K + +R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGKRKIAFAMTAIKGVGRRYATIVCKKADVDVTKRAGELSDDEVEKLITVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPNWFLNRQKDVKDGKFSQVMSNQLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|50305489|ref|XP_452704.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641837|emb|CAH01555.1| KLLA0C11297p [Kluyveromyces lactis] Length = 137 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + + L +GIG K+++ IC+KL P R+HQL E +V+ I + Sbjct: 3 VHILGKGFKGKEIIKIGLASKFYGIGLKTAEKICSKLGFYPWMRMHQLTEPQVMAITSEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +EGD R V NI +G Y G+RH GLPVRGQRT NA+ ++ K Sbjct: 63 -ANMTIEGDARAIVKENIALKRSIGSYEGMRHALGLPVRGQRTRNNAKVARRLNK 116 >gi|256270865|gb|EEU06003.1| Rps18bp [Saccharomyces cerevisiae JAY291] Length = 146 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + ++ + +++RL + +RG+RH GL V Sbjct: 74 QNPTHYKIPAWFLNRQNDITNGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRRR 145 >gi|302410605|ref|XP_003003136.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102] gi|261358160|gb|EEY20588.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102] Length = 156 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVHSKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|84508531|ref|YP_448695.1| ribosomal protein S13 [Dictyota dichotoma] gi|45925699|gb|AAS79080.1| ribosomal protein S13 [Dictyota dichotoma] Length = 115 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I G + K V+ +L YI GIG S+ +CNK I + R + ++ + I Sbjct: 1 MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E +++ L + I+R + CYRGLRH+RGLPVRGQRTHTNA+ R Sbjct: 61 EASSFRLGQSLEKYQIERIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKRRSTVK 115 >gi|126459585|ref|YP_001055863.1| 30S ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548] gi|158706268|sp|A3MUT0|RS13_PYRCJ RecName: Full=30S ribosomal protein S13P gi|126249306|gb|ABO08397.1| SSU ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548] Length = 153 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++ + +L ++ + L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GV +K+ Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147 >gi|310798436|gb|EFQ33329.1| ribosomal protein S13/S18 [Glomerella graminicola M1.001] Length = 156 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|70994567|ref|XP_752061.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293] gi|66849695|gb|EAL90023.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293] gi|159125025|gb|EDP50142.1| 40S ribosomal protein S13 [Aspergillus fumigatus A1163] Length = 169 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%) Query: 2 ARIAGVNIPRAKRVV----------------RALCYIHGIGFKSSQDICNKLAIPPERRV 45 I GVN P V ++L G+G + S + + I P +V Sbjct: 22 VFILGVNFPERNLVKASASLSQRLRPPGHFSKSLETFFGVGPQVSARLLARFHIHPTCKV 81 Query: 46 HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 +L +V+ + A+ D ++E DLRR + +IKRL + G YRG RH GLPVRGQRT T Sbjct: 82 GELANKQVLDLTAALS-DMKIENDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTRT 140 Query: 106 NARTRK 111 A K Sbjct: 141 QAENAK 146 >gi|321263256|ref|XP_003196346.1| ribosomal protein S18 [Cryptococcus gattii WM276] gi|317462822|gb|ADV24559.1| ribosomal protein S18, putative [Cryptococcus gattii WM276] Length = 155 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + +C K + +R +L E+ +I + Sbjct: 15 ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + + +++RL + +RGLRH GL V Sbjct: 75 QNPAQFKIPSWFLNRQRDITDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + G+ +K+ Sbjct: 135 RGQHTKTTGR---RVGRAVAGKKK 155 >gi|76802056|ref|YP_327064.1| 30S ribosomal protein S13P [Natronomonas pharaonis DSM 2160] gi|121724406|sp|Q3IQT9|RS13_NATPD RecName: Full=30S ribosomal protein S13P gi|76557921|emb|CAI49505.1| ribosomal protein S13 [Natronomonas pharaonis DSM 2160] Length = 170 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL ++GIG + ++ I K + + L E ++ + A+ Sbjct: 18 FVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAV 77 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E+ +++ DL+ + +I R+ + YRG+RH+RG VR Sbjct: 78 EEYGDEVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVR 137 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 138 GQRTKSTGRTEGTIG 152 >gi|289580104|ref|YP_003478570.1| ribosomal protein S13P [Natrialba magadii ATCC 43099] gi|289529657|gb|ADD04008.1| ribosomal protein S13P [Natrialba magadii ATCC 43099] Length = 171 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ I K + +L E + ++ + Sbjct: 17 FVRIGQTDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLV 76 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E +++ DL+ + +I R+ + Y+G+RH+RG VR Sbjct: 77 ENYAEEVPDWLNNRQNDFYSGETTHEIGNDLQLSRQHDINRMKMIDSYKGVRHKRGQKVR 136 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 137 GQRTKSTGRTEGTIG 151 >gi|323455964|gb|EGB11831.1| hypothetical protein AURANDRAFT_20379 [Aureococcus anophagefferens] Length = 154 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 22/138 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G+G + S +C K A+ +R +L EV ++ I Sbjct: 15 ILRVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAII 74 Query: 61 ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ L++ + +++RL + +RGLRH G+ V Sbjct: 75 QNPKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRV 134 Query: 99 RGQRTHTNARTRKKFGKG 116 RGQ T + R K Sbjct: 135 RGQHTKSTGRRGKTMAAT 152 >gi|186920119|ref|YP_001874773.1| ribosomal protein S13 [Hemiselmis andersenii] gi|186461065|gb|ACC78227.1| ribosomal protein S13 [Hemiselmis andersenii] Length = 113 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I VN+ KRV + ++GIG + CN+L I + V L ++ + + + I Sbjct: 1 MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60 Query: 61 E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 E Q+ V+ L+ I L+D+ YRG+RH LPVRGQRT TNAR+RK+ Sbjct: 61 EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRKR 113 >gi|154151764|ref|YP_001405382.1| 30S ribosomal protein S13P [Candidatus Methanoregula boonei 6A8] gi|154000316|gb|ABS56739.1| ribosomal protein S13 [Methanoregula boonei 6A8] Length = 153 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 24/142 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI ++ K V AL I GIG +S I + ++ L E V +IR A+E Sbjct: 11 VRIGTTDLDGTKSVRVALTGIKGIGRHTSTVISRMAKVDEYAKLGLLDEESVNRIRAAVE 70 Query: 62 Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + + GD+ +I + + CY+G+RH G VRG Sbjct: 71 KYATSIPMWMANRPKDLYTGENKHLIGGDVALARDEDINMMRKIRCYKGIRHETGQKVRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + RT GV++K+ Sbjct: 131 QRTKSTGRTGTTV---GVSKKK 149 >gi|226348810|gb|ACO50714.1| ribosomal protein S13 [Micromonas pusilla CCMP1545] Length = 118 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 62/115 (53%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M N+ + + AL ++G+G ++Q +C++L P+ L Q+ + + Sbjct: 1 MVFFMHTNLKADRPIRLALTQVYGLGPSTAQQLCDQLGFHPKMTTGSLKAGHWDQLARIV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +L+R A +I+R + + Y+G R +GLP+RGQRTHTNART +K + Sbjct: 61 SAYHITGAELKRVQAEDIQRTVRMSSYKGFRFTQGLPLRGQRTHTNARTARKHRR 115 >gi|241957179|ref|XP_002421309.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36] gi|223644653|emb|CAX40643.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36] gi|238883265|gb|EEQ46903.1| 40S ribosomal protein S18 [Candida albicans WO-1] Length = 145 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407] Length = 156 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++VV AL + G G + + + K I R +L ++ +I + Sbjct: 14 IIRLLNTNIDGKQKVVYALTKVKGCGRRYANIVAKKADIDLNLRAGELTAEQLERIVSIL 73 Query: 61 EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V+G + + +++RL + +RGLRH GL V Sbjct: 74 QSPTQYKIPSWFLNRQRDIVDGKDSQILANGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154 >gi|257388629|ref|YP_003178402.1| 30S ribosomal protein S13P [Halomicrobium mukohataei DSM 12286] gi|257170936|gb|ACV48695.1| ribosomal protein S13 [Halomicrobium mukohataei DSM 12286] Length = 178 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ I K + + L + ++ + + + Sbjct: 20 FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E +++ DL+ ++ R+ + Y+G+RH+RG VR Sbjct: 80 EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 140 GQRTKSTGRTEGTIG 154 >gi|40287492|gb|AAR83860.1| putative ribosomal protein [Capsicum annuum] Length = 152 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I GIG + + C K I +R +L +E+ + + Sbjct: 12 ILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGELSAAELDSLMVVV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|18313810|ref|NP_560477.1| 30S ribosomal protein S13P [Pyrobaculum aerophilum str. IM2] gi|32363374|sp|Q8ZTV0|RS13_PYRAE RecName: Full=30S ribosomal protein S13P gi|18161371|gb|AAL64659.1| ribosomal protein S13 [Pyrobaculum aerophilum str. IM2] Length = 152 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I GIG S+ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++ + +L ++ + L ++G+RH GL VR Sbjct: 68 RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GV +K+ Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147 >gi|307595928|ref|YP_003902245.1| 30S ribosomal protein S13P [Vulcanisaeta distributa DSM 14429] gi|307551129|gb|ADN51194.1| ribosomal protein S13P [Vulcanisaeta distributa DSM 14429] Length = 160 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC L I P R+ QL + V ++ A+ Sbjct: 8 IVRIGDTDLDGFKPVAYALTKIRGIGISTAYAICRYLGINPSIRLGQLDDETVRKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +Q + DL +I + L ++G+RH GL VR Sbjct: 68 RNLHQFAPGWFVNRPKDPETGRNIHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127 Query: 100 GQRTHTNARTRKKFG 114 GQRT T R G Sbjct: 128 GQRTRTTGRLGLTVG 142 >gi|157690762|tpe|CAL69108.1| TPA: putative 40S ribosomal protein S18 [Spadella cephaloptera] Length = 154 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ A+ I G G + S +C K + +R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGRRKIMFAMTSIKGCGRRFSNIVCKKADVDMTKRAGELSDEEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 NNPRQYKIPDWFLNRQKDVKDGKYSQVLSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R GV++K+ Sbjct: 132 RGQHTKTTGRRGCTV---GVSKKK 152 >gi|322706012|gb|EFY97594.1| 30S ribosomal protein S13 [Metarhizium anisopliae ARSEF 23] Length = 119 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G +S I K +I +V L V + + Sbjct: 1 MVFILGVNFNDGKLVKKALESFYALGSTTSSRIMAKYSIHKLAKVGSLSPRTVTSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 Q +E D RR V NI+RL D+G YRG RH GLPVRGQRT T T K + Sbjct: 61 SQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMGLPVRGQRTRTQTATANKLNR 114 >gi|320582685|gb|EFW96902.1| putative DnaJ-like heat-shock protein [Pichia angusta DL-1] Length = 949 Score = 116 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Query: 17 RALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 L + G+G K+++ IC K+ + P R+HQL E++V+ + + + D + L + V Sbjct: 846 IGLAHTFFGVGLKTAEKICAKVGLYPSMRMHQLNETQVMAVTKELT-DMTIGSRLLQQVR 904 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIK G Y+GLRH GLPV GQRT NART ++ K Sbjct: 905 SNIKLKRATGSYQGLRHAMGLPVHGQRTKYNARTARRLNK 944 >gi|121512018|gb|ABM55460.1| ribosomal protein S18 [Xenopsylla cheopis] Length = 152 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V+ A+ I G+G + + + K + +R + E EV +I + Sbjct: 12 ILRIMSTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q L + +++R+ + +RG+RH GL V Sbjct: 72 STPRQFKIPDWFLNRQKDIVDGRYSQLTSSSLDSKLREDLERMKKIKAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|158289973|ref|XP_311570.4| AGAP010375-PA [Anopheles gambiae str. PEST] gi|157018416|gb|EAA07206.5| AGAP010375-PA [Anopheles gambiae str. PEST] Length = 152 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I I Sbjct: 12 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITII 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++ + +++RL + +RG+RH GL V Sbjct: 72 SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum Iowa II] gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502] gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum Iowa II] gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis] Length = 153 Score = 116 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++++ AL I GIG + S +C K + +R QL + E+ +I + Sbjct: 13 ILRIMNTNVDGRQKIMYALTAIKGIGRRFSNIVCKKADVNLSKRAGQLSQEEINRIVAIV 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +L ++ +++RL + +RGLRH G+ V Sbjct: 73 ANPLQFNIPSYMLNRQKDVKDGKYKHITSNNLEASLREDLERLKKIRSHRGLRHHWGVRV 132 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 133 RGQHTKTTGR 142 >gi|126134141|ref|XP_001383595.1| hypothetical protein PICST_57353 [Scheffersomyces stipitis CBS 6054] gi|126095744|gb|ABN65566.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 122 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + G +I V L I GIG+++++ IC K+ I P+ R++QL E +++ + + I Sbjct: 3 VHVFGKSIKHNSLVRIGLAKAIFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEI 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D VEG L++ + +I+ D+G Y G RH +GLPVRGQ T NA T K K Sbjct: 63 S-DLLVEGHLKQKINNDIRMKRDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNK 116 >gi|76573321|gb|ABA46765.1| unknown [Solanum tuberosum] Length = 152 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ A+ I GIG + + C K I +R +L +E+ + + Sbjct: 12 ILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMSKRAGELTAAELDSLMVVV 71 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ L + +++RL + +RGLRH GL V Sbjct: 72 ANPRQFKIPDWFLNRQKDYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV++KR Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152 >gi|17542018|ref|NP_502794.1| Ribosomal Protein, Small subunit family member (rps-18) [Caenorhabditis elegans] gi|3881192|emb|CAB16517.1| C. elegans protein Y57G11C.16, confirmed by transcript evidence [Caenorhabditis elegans] Length = 154 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K + +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + + + +++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|328899750|gb|AEB54647.1| ribosomal protein S18 [Procambarus clarkii] Length = 152 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ A+ I G+G + S + K I +R ++ E EV +I + Sbjct: 12 ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + +L + +++R+ + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|255717919|ref|XP_002555240.1| KLTH0G04664p [Lachancea thermotolerans] gi|238936624|emb|CAR24803.1| KLTH0G04664p [Lachancea thermotolerans] Length = 146 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL I G+G + + +C K + ++R +L + E+ +I Q + Sbjct: 14 ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLVCKKADVSLQKRAGELTQEELERIVQIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RG+RH GL V Sbjct: 74 QNPTQYKIPAWFLNRQKDVNDGKDYHNLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T R R Sbjct: 134 RGQHTKTTGRKR 145 >gi|268534940|ref|XP_002632603.1| C. briggsae CBR-RPS-18 protein [Caenorhabditis briggsae] gi|187022469|emb|CAP38284.1| CBR-RPS-18 protein [Caenorhabditis briggsae AF16] Length = 154 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K I +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPFALTAIKGVGRRFAFVCCRKADIDVNKRAGELTEEDFDKIVTIMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + + + +++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|260895671|ref|ZP_05904167.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466] gi|308089500|gb|EFO39195.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466] Length = 90 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%) Query: 32 DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91 I ++ I + ++ +L E ++ Q+R + + Y VEGDLRR V+MNIKRLMDLGCYRGLR Sbjct: 4 AILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMNIKRLMDLGCYRGLR 62 Query: 92 HRRGLPVRGQRTHTNARTRKKFGKGG 117 HRR LP+RGQRT TNARTRK K Sbjct: 63 HRRSLPLRGQRTKTNARTRKGPRKPI 88 >gi|71005082|ref|XP_757207.1| hypothetical protein UM01060.1 [Ustilago maydis 521] gi|46096569|gb|EAK81802.1| hypothetical protein UM01060.1 [Ustilago maydis 521] Length = 154 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 26/144 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V AL I G+G + + +C K I +R +L E+ +I + Sbjct: 15 ILRLLNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLSKRAGELNSDELERIVTIL 74 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + ++ + +++RL + +RG+RH GL V Sbjct: 75 QNPAEFKIPSWFLNRQRDIVDGKSSQLLSNNIDSKLRDDLERLKKIKAHRGIRHYLGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + +K+ Sbjct: 135 RGQHTKTTGRRGRTV----ANKKK 154 >gi|328860508|gb|EGG09614.1| hypothetical protein MELLADRAFT_31252 [Melampsora larici-populina 98AG31] Length = 122 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 4/117 (3%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVH-QLVES---EVIQIRQ 58 + GVN+P K V AL GIG +++ ICN+L P+ V +L + + + + Sbjct: 3 FVLGVNLPERKLVQFALLQYVGIGHYTAKLICNRLQFHPKLTVDFKLSDPPKPKTLSLEA 62 Query: 59 AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 Q +E DLRR V NI +G YRG RH G PV GQRTHTNA+T KK + Sbjct: 63 DPLQRLIIESDLRREVRANIAHHRAVGSYRGKRHALGFPVNGQRTHTNAKTAKKLNR 119 >gi|319738236|emb|CBJ18012.1| ribosomal protein S13 [Ectocarpus siliculosus] Length = 119 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V++L +I+G+G S+++C K + R + + + Sbjct: 1 MPYIIGTSIPEDKVLVQSLSHIYGLGSSQSKNLCKKAGFGSDSRGSDITFLKGKILENFA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRGLRH++GLPVRGQRTHTNA+ R Sbjct: 61 EATSLPLGSDLRRFQNNKIRRLCSISTYRGLRHKKGLPVRGQRTHTNAKKR 111 >gi|62989803|emb|CAD91294.1| mitochondrial ribosomal protein RPS13 [Orchis italica] Length = 116 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 67/112 (59%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ +G +V A + GIG K + + ++L I ++++L +S++ Q+ Q I Sbjct: 1 MSYNSGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHTNA T +K Sbjct: 61 SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNAGTCRK 112 >gi|308450179|ref|XP_003088206.1| hypothetical protein CRE_02774 [Caenorhabditis remanei] gi|308461679|ref|XP_003093129.1| hypothetical protein CRE_12287 [Caenorhabditis remanei] gi|308248781|gb|EFO92733.1| hypothetical protein CRE_02774 [Caenorhabditis remanei] gi|308250761|gb|EFO94713.1| hypothetical protein CRE_12287 [Caenorhabditis remanei] Length = 154 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ NI ++V AL I G+G + + C K + +R +L E + +I ++ Sbjct: 14 RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELSEEDFDKIVTIMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + + + +++R+ + +RGLRH GL VRG Sbjct: 74 PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R + GV++K+ Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152 >gi|256273632|gb|EEU08559.1| Rps18ap [Saccharomyces cerevisiae JAY291] Length = 147 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 17 YLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 76 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + ++ + +++RL + +RG+RH GL VRG Sbjct: 77 PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 136 Query: 101 QRTHTNARTR 110 Q T T R R Sbjct: 137 QHTKTTGRRR 146 >gi|300711114|ref|YP_003736928.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3] gi|299124797|gb|ADJ15136.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3] Length = 168 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 20/134 (14%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ I I +L + E+ I + + Sbjct: 20 FVRIGQTDLDGTKTVERSLSEMNGIGRRAARIIAQNAGISRTATFGRLEDDEIDAIVEEV 79 Query: 61 EQ--------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E ++ DL T +I RL + YRG+RH+RG VRG Sbjct: 80 EGFAENNPEWLANHQGYYDGEITHETGNDLELTRRQDINRLQMISAYRGVRHQRGQKVRG 139 Query: 101 QRTHTNARTRKKFG 114 QRT + R+ G Sbjct: 140 QRTRSTGRSEGTIG 153 >gi|302348809|ref|YP_003816447.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15] gi|302329221|gb|ADL19416.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15] Length = 173 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 22/140 (15%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 RIA +IP V+ L I GIG+ ++ I KL I P R+ L + ++ A+ Sbjct: 13 VRIANTDIPGEDTVIYGLSRIKGIGYATALAIARKLGIDPTARIGYLQPDVIKRLEDAVN 72 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + V +L +I R + +G +RG+RH+ G VR Sbjct: 73 DLTRLSLPSWLYNRRKDYESGQDKHLVGAELIFVARRDIDREIKIGSWRGVRHKLGYKVR 132 Query: 100 GQRTHTNARTRKKFGKGGVA 119 GQ+THT RT G A Sbjct: 133 GQKTHTTGRTGMTVGVKRAA 152 >gi|325967787|ref|YP_004243979.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28] gi|323706990|gb|ADY00477.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28] Length = 158 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K V AL I GIG ++ IC L I P R+ QL + V ++ A+ Sbjct: 8 IVRIGDTDLDGFKPVAYALTKIRGIGIPTAYAICRYLGINPLIRLGQLDDETVRKLDWAV 67 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 YQ + DL +I + L ++G+RH GL VR Sbjct: 68 RNLYQFAPGWFVNRPKDPETGRNVHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127 Query: 100 GQRTHTNARTRKKFG 114 GQRT T R G Sbjct: 128 GQRTRTTGRLGLTVG 142 >gi|21450006|ref|NP_659268.1| ribosomal protein S13 [Laminaria digitata] gi|21425331|emb|CAC87964.1| ribosomal protein S13 [Laminaria digitata] Length = 119 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+GIG S+ +C K + R + ++ + Sbjct: 1 MPFIIGTSIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFAKGKNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVISTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|299830454|ref|YP_003734825.1| ribosomal protein L13 [Pythium ultimum] gi|299830485|ref|YP_003734856.1| ribosomal protein L13 [Pythium ultimum] gi|269810831|gb|ACZ43860.1| ribosomal protein L13 [Pythium ultimum] gi|269810862|gb|ACZ43891.1| ribosomal protein L13 [Pythium ultimum] gi|269812144|gb|ACZ44442.1| ribosomal protein L13 [Pythium ultimum] gi|269812175|gb|ACZ44473.1| ribosomal protein L13 [Pythium ultimum] Length = 137 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 70/121 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINEYQSKKICKNIGINPQITINKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ ++E L+++ + L+D+ RG+R +GLPVRGQRTHTNA+T KK K V + Sbjct: 61 NKNIKIEQLLKQSKKDRLNELLDIKSNRGIRLSQGLPVRGQRTHTNAKTVKKLKKIFVQK 120 Query: 121 K 121 + Sbjct: 121 Q 121 >gi|225714468|gb|ACO13080.1| 40S ribosomal protein S18 [Lepeophtheirus salmonis] Length = 152 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + ++ A+ I GIG + + + K I +R +L E EV +I + Sbjct: 12 ILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G+ V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|56791625|gb|AAW30350.1| ribosomal protein S13 [Amborella trichopoda] Length = 102 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 62/98 (63%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 ++V A I GIG K + + ++L I ++++L + ++ ++ Q I QD+ V + + Sbjct: 5 NEKVRIASTKIDGIGPKKAIQVRSRLGISGNIKMNELTKYQIDKMEQMIGQDHVVHWEFK 64 Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 R +I+RL+ + YRG+RH+ G P+RGQRTHTNART Sbjct: 65 RGERADIERLISISRYRGIRHKDGSPLRGQRTHTNART 102 >gi|156848892|ref|XP_001647327.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM 70294] gi|156118012|gb|EDO19469.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM 70294] Length = 121 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + V AL +G+G +++Q IC+KL P R+HQL E +++ I + Sbjct: 3 VHILGKGFKGKEVVRIALASKFYGVGLETAQKICSKLGFYPWMRMHQLTEPQILGITSEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +EG+ R V NI +G Y+GLRH LPVRGQ T NA T ++ + Sbjct: 63 S-NMTIEGNARAVVKNNIALKRRIGSYQGLRHAMNLPVRGQNTRNNAHTARRLNR 116 >gi|126697458|gb|ABO26686.1| 40S ribosomal protein S18 [Haliotis discus discus] Length = 154 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + S + K I +R +L + EV ++ + Sbjct: 14 ILRVMNTNIDGRTKIMFALTAIKGMGRRFSNVVLKKANIDLTKRAGELSDEEVDRVITVM 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 74 TNPRQYKIPDWFLNRQKDVKDGKFNQVLANMLDNKLREDLERLKKIRNHRGLRHYWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154 >gi|325092307|gb|EGC45617.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H88] Length = 125 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G+N P + V +AL GIG + + + + ++ L +V+ + A+ Sbjct: 1 MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR + +I+RL D G RG RH GLPVRGQ T + +T K K Sbjct: 61 SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNTRSQIKTAIKLNK 114 >gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri] Length = 152 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ A+ I GIG + + + K + +R +L E EV ++ + Sbjct: 12 ILRVMNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|312218573|emb|CBX98518.1| similar to 30S ribosomal protein S13 [Leptosphaeria maculans] Length = 125 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + A V R+L GIG K SQ I K I P ++V L S V+++ + + Sbjct: 1 MVFINGFSFTEATLVKRSLESFFGIGPKVSQKIMAKFYIHPWQKVGSLKNSTVLELTEEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DLRR V +I+RL D+G YRG RH GLPVRGQRT T T ++ + Sbjct: 61 T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQRTRTQITTARRLNR 114 >gi|146422129|ref|XP_001487006.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260] gi|146388127|gb|EDK36285.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260] Length = 145 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ AL I G+G + S +C K + ++R +L + E+ +I + Sbjct: 14 ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + ++ + +++RL + +RG+RH GL V Sbjct: 74 QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNMESKLRDDLERLKKIRAHRGIRHFWGLKV 133 Query: 99 RGQRTHTNARTR 110 RGQ T T +R R Sbjct: 134 RGQHTKTTSRGR 145 >gi|307195851|gb|EFN77647.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|307195853|gb|EFN77649.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|307195858|gb|EFN77654.1| 40S ribosomal protein S18 [Harpegnathos saltator] gi|332020747|gb|EGI61151.1| 40S ribosomal protein S18 [Acromyrmex echinatior] Length = 137 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 25/140 (17%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 G NI ++V+ A+ I G+G + + + K I ++R + E EV +I + Sbjct: 1 MGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 60 Query: 65 Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 Q +L + +++R+ + +RGLRH GL VRGQ Sbjct: 61 QYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRGQH 120 Query: 103 THTNARTRKKFGKGGVARKR 122 T T R + GV++K+ Sbjct: 121 TKTTGRRGRTV---GVSKKK 137 >gi|254569222|ref|XP_002491721.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|238031518|emb|CAY69441.1| Protein component of the small (40S) ribosomal subunit [Pichia pastoris GS115] gi|328351775|emb|CCA38174.1| 40S ribosomal protein S18 [Pichia pastoris CBS 7435] Length = 153 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + S +C K + +R +L + E+ ++ + Sbjct: 17 ILRLLNTNVDGRIKIMYALTTIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIM 76 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + L +I+RL + +RG+RH GL V Sbjct: 77 QNPTQYKIPAWFLNRQRDTVDGKDYHTLANSLESKYRDDIERLKKIRAHRGIRHAWGLKV 136 Query: 99 RGQRTHTNAR 108 RGQ T T +R Sbjct: 137 RGQHTKTTSR 146 >gi|110671476|gb|ABG81989.1| putative ribosomal protein S18 [Diaphorina citri] Length = 153 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 26/145 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ AL I G G + S + K I +R + E EV +I + Sbjct: 12 ILRVMSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM 71 Query: 61 EQDYQ--------------VEGD---------LRRTVAMNIKRLMDLGCYRGLRHRRGLP 97 Q V+G L + +++RL + +RG+RH GL Sbjct: 72 TNPRQYKIPDWFLNRQKDIVDGKYSQLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLR 131 Query: 98 VRGQRTHTNARTRKKFGKGGVARKR 122 VRGQ T T R + GV++K+ Sbjct: 132 VRGQHTKTTGRRGRTV---GVSKKK 153 >gi|294495901|ref|YP_003542394.1| 30S ribosomal protein S13P [Methanohalophilus mahii DSM 5219] gi|292666900|gb|ADE36749.1| SSU ribosomal protein S13P [Methanohalophilus mahii DSM 5219] Length = 148 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 21/134 (15%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 RI ++ ++V+ AL I GIG ++++ I + P + L + + ++ +AI Sbjct: 10 VRIMNTDLQGKQKVLYALTGIKGIGRRTARLIAESAEVDPSETIGYLSDEGIARLNEAIE 69 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + + D+ T+ ++ L + YRG+RH RGL VRG Sbjct: 70 TFENHLPVWMLNRQKDLLTGENKHILGQDIDLTIREDLNDLKKIRAYRGIRHERGLKVRG 129 Query: 101 QRTHTNARTRKKFG 114 QRT + R G Sbjct: 130 QRTKSAGRGGSTIG 143 >gi|156086130|ref|XP_001610474.1| 40S ribosomal protein S18 [Babesia bovis T2Bo] gi|154797727|gb|EDO06906.1| 40S ribosomal protein S18, putative [Babesia bovis] Length = 154 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V AL I GIG + + +C I +R +L E+ ++ I Sbjct: 14 ILRILNTNVDGRQKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTTDEINKVVTII 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + L + +++R+ + +RGLRH GL Sbjct: 74 SSPADVMIPAWFLNRQKDYKEGKNLHNTANMLDTCLRDDLERMKKMRLHRGLRHYWGLRT 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T + R K GV +K+ Sbjct: 134 RGQHTKSTGRHGKTV---GVVKKK 154 >gi|85091144|ref|XP_958758.1| hypothetical protein NCU09539 [Neurospora crassa OR74A] gi|28920142|gb|EAA29522.1| hypothetical protein NCU09539 [Neurospora crassa OR74A] gi|38566865|emb|CAE76171.1| probable ribosomal protein S13 [Neurospora crassa] Length = 119 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G+G ++S I K +I P ++ L V + + Sbjct: 1 MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR V NIKRL D+G YRG RH GLPVRGQ+T +K K Sbjct: 61 ST-MTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114 >gi|302690598|ref|XP_003034978.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8] gi|300108674|gb|EFJ00076.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8] Length = 171 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 52/167 (31%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + G+ + AL I+G+G K++ IC +L I RV L ++ Q+ + Sbjct: 1 MVHVLGIPLNDHHFARFALTNIYGVGRKTAHRICARLQIHDRCRVKNLTPLQITQLASFL 60 Query: 61 EQ----------------------------------------------------DYQVEG 68 + ++E Sbjct: 61 SSPQTSPPAPKLPLADPFYKAPPPETNMAEAEAKLRRRQQVRQLQGARQKDPLYNLRIES 120 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +LRR + NI +G Y GLRH LPVRGQ T +NA+T KK + Sbjct: 121 ELRREIRENIAHQRMIGSYVGLRHAMHLPVRGQNTQSNAKTAKKLNQ 167 >gi|125546023|gb|EAY92162.1| hypothetical protein OsI_13875 [Oryza sativa Indica Group] gi|125588230|gb|EAZ28894.1| hypothetical protein OsJ_12934 [Oryza sativa Japonica Group] Length = 170 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 43/162 (26%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR---------------- 44 + R+ N+ ++++ AL I G+G + S C K I +R Sbjct: 12 ILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPPPPSRRQISVMV 71 Query: 45 --VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKR 80 +L E+ ++ + Q V L + +++R Sbjct: 72 GGAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLER 131 Query: 81 LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +RGLRH GL VRGQ T T R K GV++KR Sbjct: 132 LKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 170 >gi|11499866|ref|NP_071110.1| 30S ribosomal protein S13P [Archaeoglobus fulgidus DSM 4304] gi|6226060|sp|O27999|RS13_ARCFU RecName: Full=30S ribosomal protein S13P gi|2648238|gb|AAB88972.1| SSU ribosomal protein S13P (rps13P) [Archaeoglobus fulgidus DSM 4304] Length = 146 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 23/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ K ++ AL I GIG ++++ I N+L + ++ +L + + ++++ + Sbjct: 6 IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E++ + + D+ ++I+RL+ + YRG+RH RG VR Sbjct: 66 EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R + G V RKR Sbjct: 126 GQRTRSTGRKGRTVG--VVRRKR 146 >gi|255718259|ref|XP_002555410.1| KLTH0G08646p [Lachancea thermotolerans] gi|238936794|emb|CAR24973.1| KLTH0G08646p [Lachancea thermotolerans] Length = 149 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + + AL +GIG K+S+ +C KL P R+HQL E +++ I + Sbjct: 3 VHILGKGFKGKEVIKIALASKFYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +EG+ R V NI +G Y+G+RH LPVRGQ T NA+T ++ + Sbjct: 63 ST-MTIEGNARAVVKENIALKRRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNR 116 >gi|229367816|gb|ACQ58888.1| 40S ribosomal protein S18 [Anoplopoma fimbria] Length = 152 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|320581243|gb|EFW95464.1| ribosomal protein S18B [Pichia angusta DL-1] Length = 150 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 22/133 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I G+G + + +C K + +R +L + E+ +I + Sbjct: 14 ILRLLNTNVDGRIKVMYALTTIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIM 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +L + +++RL + +RGLRH L V Sbjct: 74 QNPTQYKIPAWFLNRQADVVDGKDYHVLANNLESKLREDLERLKRMRAHRGLRHSWRLRV 133 Query: 99 RGQRTHTNARTRK 111 RGQ T T R K Sbjct: 134 RGQHTKTTGRRGK 146 >gi|312380810|gb|EFR26705.1| hypothetical protein AND_25954 [Anopheles darlingi] Length = 146 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + V AL I G+G + + + K + P +R + + EV +I + Sbjct: 6 ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIV 65 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++ + +++RL + +RG+RH GL V Sbjct: 66 SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHHWGLRV 125 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 126 RGQHTKTTGRRGRTV---GVSKKK 146 >gi|225710398|gb|ACO11045.1| 40S ribosomal protein S18 [Caligus rogercresseyi] Length = 152 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + ++ A+ I GIG + + + K I +R +L E EV +I + Sbjct: 12 ILRVMNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G+ V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|41018060|sp|Q8IT98|RS18_AEQIR RecName: Full=40S ribosomal protein S18 gi|22758908|gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians] Length = 152 Score = 114 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ A+ I G+G + + +C K + +R +L E E+ ++ + Sbjct: 12 ILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++RL + +RGLRH GL V Sbjct: 72 SNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GVA+K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152 >gi|254580623|ref|XP_002496297.1| ZYRO0C15158p [Zygosaccharomyces rouxii] gi|238939188|emb|CAR27364.1| ZYRO0C15158p [Zygosaccharomyces rouxii] Length = 121 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G + + L +GIG +++ +C+KL P R+HQL ES+++ I + Sbjct: 3 VHILGKAFKGKEVIRIGLSSKFYGIGEGTAEKVCSKLGFYPWMRMHQLSESQIMNIASEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +EGD R V NI +G Y+G+RH LPVRGQ T NA T +K K Sbjct: 63 S-NMTIEGDARAVVKENIALKKRIGSYQGMRHTLNLPVRGQHTRNNANTARKLNK 116 >gi|118372788|ref|XP_001019588.1| ribosomal protein S13p/S18e containing protein [Tetrahymena thermophila] gi|319443368|pdb|2XZM|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 gi|319443403|pdb|2XZN|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 2 gi|89301355|gb|EAR99343.1| ribosomal protein S13p/S18e containing protein [Tetrahymena thermophila SB210] gi|315570327|tpg|DAA33982.1| TPA_exp: 40S ribosomal protein rpS18e [Tetrahymena thermophila] Length = 155 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 24/142 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 RI NI + AL I GIG + + IC L I P R L E + +I I Sbjct: 16 RILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75 Query: 61 -------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++YQ+ L + +++RL + +RGLRH GL VRG Sbjct: 76 PEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRG 135 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T+ R G V + + Sbjct: 136 QHTKTSGRH--GVVCGVVRKNK 155 >gi|145932453|ref|YP_001165365.1| ribosomal protein S13 [Phytophthora ramorum] gi|110169651|gb|ABG54116.1| ribosomal protein S13 [Phytophthora ramorum] gi|188038014|gb|ACD46632.1| ribosomal protein S13 [Phytophthora ramorum] Length = 138 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 69/121 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 ++ +VE L+++ I L+++ RG+R +GLPVRGQRTHTNA+T KK + + + Sbjct: 61 NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQIFIKK 120 Query: 121 K 121 + Sbjct: 121 R 121 >gi|281211011|gb|EFA85177.1| 40S ribosomal protein S18 [Polysphondylium pallidum PN500] Length = 154 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++++ AL + GIG + + +C K + ++R +L + EV ++ + Sbjct: 12 IIRIYNTNVDGRRKIMYALTNVKGIGRRFANLVCKKADVDLQKRAGELSKDEVERLTTIL 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L +++RL + +RG+RH GL V Sbjct: 72 NHPRQYNIPAWFLNRQKDIKDGKYSQALANQLDVKYREDLERLKKIRAHRGIRHHMGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T T R + GV++K+ Sbjct: 132 RGQKTKTTGRRGRTV---GVSKKK 152 >gi|110668837|ref|YP_658648.1| 30S ribosomal protein S13P [Haloquadratum walsbyi DSM 16790] gi|121684701|sp|Q18G53|RS13_HALWD RecName: Full=30S ribosomal protein S13P gi|109626584|emb|CAJ53048.1| ribosomal protein S13 [Haloquadratum walsbyi DSM 16790] Length = 173 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L + GIG ++++ I + ++ L E E+ I A+ Sbjct: 21 FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E D++ DL ++ R+ + Y+G+RH+RG VR Sbjct: 81 ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 141 GQRTKSTGRTEGTIG 155 >gi|62989761|emb|CAD91273.1| mitochondrial ribosomal protein RPS13 [Diuris sulphurea] Length = 116 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 65/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G +V A + GI K + + +L I ++ +L + ++ Q+ Q I Sbjct: 1 MSYISGARSFPDSQVRIASTKMEGIAPKKAIQVRYRLGIRGNIKMTELTKYQIDQMEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + + YRG+RH+ G P+RGQRTHTNART +K Sbjct: 61 SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112 >gi|302915869|ref|XP_003051745.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256732684|gb|EEU46032.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 131 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ AL I G+G + S +C K + +R +L E+ +I I Sbjct: 1 ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 60 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + + + +++RL + +RGLRH GL V Sbjct: 61 QNPTQYKIPTWFLNRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 120 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 121 RGQHTKTTGR 130 >gi|49258832|pdb|1S1H|M Chain M, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is In File 1s1i Length = 132 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 2 RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 61 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + ++ + +++RL + +RG+RH GL VRG Sbjct: 62 PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 121 Query: 101 QRTHTNARTR 110 Q T T R R Sbjct: 122 QHTKTTGRRR 131 >gi|28626512|ref|NP_775341.1| 40S ribosomal protein S18 [Danio rerio] gi|41018061|sp|Q8JGS9|RS18_DANRE RecName: Full=40S ribosomal protein S18 gi|20977555|gb|AAM28205.1| 40S ribosomal protein S18 [Danio rerio] gi|38566120|gb|AAH62289.1| Ribosomal protein S18 [Danio rerio] gi|126632524|emb|CAM56557.1| ribosomal protein S18 [Danio rerio] Length = 152 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|313229085|emb|CBY18237.1| unnamed protein product [Oikopleura dioica] Length = 152 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + + A+ I GIG + + IC K I +R QL E E+ ++ + Sbjct: 12 ILRVQNTNIDGQRNITFAMTAIKGIGRRFANIICKKADINISQRAGQLDEEEIKRMETIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++R+ + C+RGLRH L V Sbjct: 72 LNPRQYKVPDYFLNRQKDAKDGTFTQVISNGLETKLREDLERMKKIRCHRGLRHYWMLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|167044121|gb|ABZ08804.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote HF4000_APKG5C13] Length = 208 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 22/129 (17%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI G +IP ++++ L I G+G+ + I N L I P +R+ L +V I I+ Sbjct: 9 VRIVGNDIPGERKMIVGLTQIRGVGYMFANTILNLLKINPNQRIGYLSLEQVKSIESIIK 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + D+ TV +I+R G +RG+RH GL VR Sbjct: 69 NPSASNFPSWFLNRRKDVETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVR 128 Query: 100 GQRTHTNAR 108 GQRT R Sbjct: 129 GQRTRCTGR 137 >gi|60417186|emb|CAH57704.1| 40S ribosomal protein S18 [Platichthys flesus] gi|116488056|gb|ABJ98610.1| 40S ribosomal protein S18 [Scophthalmus maximus] gi|124300823|dbj|BAF45907.1| ribosomal protein S18 [Solea senegalensis] Length = 152 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|116335040|ref|YP_802535.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV] gi|123025707|sp|Q05FK2|RS13_CARRP RecName: Full=30S ribosomal protein S13 gi|116235321|dbj|BAF35169.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV] Length = 118 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 1/115 (0%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 I GV I + K +V L I+GIG+ S IC+K+ ++ L E +I I + Sbjct: 5 ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINK- 63 Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118 VE +L+ + N K+ ++L Y+ LRH++ LP RGQRT TNA+TRKK + Sbjct: 64 INVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMNHEII 118 >gi|289615638|emb|CBI57559.1| unnamed protein product [Sordaria macrospora] Length = 119 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G+G ++S I K +I P ++ L V + + Sbjct: 1 MVFILGVNFNEQKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR V NIKRL D+G YRG RH GLPVRGQ+T +K K Sbjct: 61 ST-MTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114 >gi|189193877|ref|XP_001933277.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187978841|gb|EDU45467.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 125 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + A V R+L GIG SQ I K I P +V L S ++ + + Sbjct: 1 MVFINGFSFTEATLVKRSLESFFGIGPSVSQRIMAKFYIHPWAKVGSLKNSTLLDLSAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK---GG 117 + ++E DLRR V +I+RL D+G YRG RH GLPVRGQ+T T T ++ K GG Sbjct: 61 T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQKTRTQITTARRLNKVERGG 119 Query: 118 VAR 120 R Sbjct: 120 TGR 122 >gi|134062|sp|P15758|RT13_OENBE RecName: Full=Ribosomal protein S13, mitochondrial gi|70973|pir||R3OB3M ribosomal protein S13 - evening primrose mitochondrion Length = 114 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + ++V A + GIG K + + ++L + +L + ++ QI Q Sbjct: 1 MSYISGARLVADEQVRIASTKMDGIGPKKAIQVRSRLG--GNIKRKELTKYQIDQIEQMR 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+R + + CYRG+RH+ GLP+RGQR+HTNART RK+ K Sbjct: 59 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRKRIRK 114 >gi|148362150|gb|ABQ59673.1| ribosomal protein S18 [Salmo salar] gi|197631783|gb|ACH70615.1| ribosomal protein S18 [Salmo salar] gi|209732176|gb|ACI66957.1| 40S ribosomal protein S18 [Salmo salar] gi|209733230|gb|ACI67484.1| 40S ribosomal protein S18 [Salmo salar] gi|209736928|gb|ACI69333.1| 40S ribosomal protein S18 [Salmo salar] gi|209738224|gb|ACI69981.1| 40S ribosomal protein S18 [Salmo salar] gi|223646140|gb|ACN09828.1| 40S ribosomal protein S18 [Salmo salar] gi|223646324|gb|ACN09920.1| 40S ribosomal protein S18 [Salmo salar] gi|223671987|gb|ACN12175.1| 40S ribosomal protein S18 [Salmo salar] gi|223672171|gb|ACN12267.1| 40S ribosomal protein S18 [Salmo salar] gi|225703166|gb|ACO07429.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225703728|gb|ACO07710.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225705884|gb|ACO08788.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] gi|225716168|gb|ACO13930.1| 40S ribosomal protein S18 [Esox lucius] gi|260182164|gb|ACX35593.1| ribosomal protein S18 [Salmo salar] gi|260182178|gb|ACX35606.1| ribosomal protein S18 [Salmo salar] gi|307147577|gb|ADN37677.1| ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|229315919|ref|YP_002860145.1| ribosomal protein S13 [Micromonas sp. RCC299] gi|226431204|gb|ACO55609.1| ribosomal protein S13 [Micromonas sp. RCC299] Length = 120 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 62/117 (52%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M N+ +V AL I+GIG ++ +C++L + V L +++ Q+ + I Sbjct: 1 MVFFMQQNLRPNIKVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 + + +L R + +I R + + Y+G R +GLPVRGQRTHTNAR +K K Sbjct: 61 NRFHVTGQELERVIQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKKKKPI 117 >gi|322369537|ref|ZP_08044102.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253] gi|320551269|gb|EFW92918.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253] Length = 168 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++GIG ++++ + + + + +L + ++ ++ +A+ Sbjct: 16 FVRIGQTDLDGTKTVERSLSEMNGIGRRTARIVAEEADVDRKATFGRLDDDDIERVVEAV 75 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++ DL + ++ R+ + Y+G+RH+RG VR Sbjct: 76 ENYADEVPAWLTNHRKEYFSGETTHETGNDLSMSRRRDLNRMQMIDSYKGVRHKRGQKVR 135 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 136 GQRTKSTGRTEGTIG 150 >gi|318190651|ref|NP_001187081.1| 40S ribosomal protein S18 [Ictalurus punctatus] gi|41018101|sp|Q90YQ5|RS18_ICTPU RecName: Full=40S ribosomal protein S18 gi|15294049|gb|AAK95201.1|AF402827_1 40S ribosomal protein S18 [Ictalurus punctatus] Length = 152 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|281500818|pdb|3JYV|M Chain M, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 130 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 22/130 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ ++V AL I G+G + S +C K + +R +L + E+ +I Q ++ Sbjct: 1 RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 60 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + ++ + +++RL + +RG+RH GL VRG Sbjct: 61 PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 120 Query: 101 QRTHTNARTR 110 Q T T R R Sbjct: 121 QHTKTTGRRR 130 >gi|45191023|ref|NP_985277.1| AER422Cp [Ashbya gossypii ATCC 10895] gi|44984091|gb|AAS53101.1| AER422Cp [Ashbya gossypii ATCC 10895] Length = 144 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + G + V L +GIG K+S+ +C KL + P R+ L E +++ + + Sbjct: 3 VHVLGKAFKGKEVVRIGLASKFYGIGLKTSERLCAKLGLYPWMRMQSLTEPQIMAMSTEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +E D R V NI +G Y GLRH GLPV GQRT TNA+T +K + Sbjct: 63 SK-MTIEDDARAIVKENIALKRRIGSYAGLRHAMGLPVNGQRTRTNAKTARKLNR 116 >gi|84508609|ref|YP_448656.1| ribosomal protein S13 [Desmarestia viridis] gi|45925641|gb|AAS79042.1| ribosomal protein S13 [Desmarestia viridis] Length = 119 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+GIG S+ +C K + R + S+ + Sbjct: 1 MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRG RHR+GLPVRGQRTHTNA+ R Sbjct: 61 EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKR 111 >gi|288560162|ref|YP_003423648.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1] gi|288542872|gb|ADC46756.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1] Length = 149 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 22/135 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+ ++ K + +AL I G+G S+ IC L + ++ + E +V +I +E Sbjct: 9 VRISRKDVDGNKTIEQALTQIKGVGLSLSRSICLTLGLNTTDKIGYISEDDVTKIEDLLE 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + +E DL T+ ++ R+ Y+G RH GLPVR Sbjct: 69 NPQNYSIPDWMLNRRKDYATGDDLHLIESDLDMTLRDDLNRMKKTRSYKGRRHEVGLPVR 128 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R G Sbjct: 129 GQRTKSTFRHSSTVG 143 >gi|257053588|ref|YP_003131421.1| 30S ribosomal protein S13P [Halorhabdus utahensis DSM 12940] gi|256692351|gb|ACV12688.1| ribosomal protein S13 [Halorhabdus utahensis DSM 12940] Length = 176 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL ++GIG ++++ I N + I +L + ++ I + Sbjct: 20 FVRIGQTDLDGTKSVERALTDMNGIGQRAARIIANDVDIDRRETFGRLEDDQIEAIVDRV 79 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E +++ DL T +I R+ + Y+G+RH+RG VR Sbjct: 80 EGFADDVPEWLANHRNDFFDGETTHEIGTDLSLTRRQDINRMKMINAYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 140 GQRTKSTGRTEGTIG 154 >gi|147905776|ref|NP_001084747.1| ribosomal protein S18 [Xenopus laevis] gi|46329492|gb|AAH68873.1| MGC82306 protein [Xenopus laevis] Length = 152 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|12232348|gb|AAG47944.1| ribosomal protein S18 [Cherax destructor] Length = 142 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ A+ I G+G + S + K I +R ++ E EV +I + Sbjct: 2 ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIM 61 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + +L + +++R+ + +RGLRH GL V Sbjct: 62 SNPRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRV 121 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 122 RGQHTKTTGRRGRTV---GVSKKK 142 >gi|145592095|ref|YP_001154097.1| 30S ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514] gi|158706267|sp|A4WM28|RS13_PYRAR RecName: Full=30S ribosomal protein S13P gi|145283863|gb|ABP51445.1| SSU ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514] Length = 152 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ K+V AL I GIG S+ IC KL I P + L E ++ ++ A+ Sbjct: 8 IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67 Query: 61 EQDYQV---------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++V +L ++ + L ++G+RH GL VR Sbjct: 68 RNLHEVAPAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GV +K+ Sbjct: 128 GQRTVTTGRLG---AVAGVTKKK 147 >gi|297601533|ref|NP_001051020.2| Os03g0704000 [Oryza sativa Japonica Group] gi|255674816|dbj|BAF12934.2| Os03g0704000 [Oryza sativa Japonica Group] Length = 203 Score = 113 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 48 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYR 88 Y +EGDL+R + I+RL ++ CYR Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYR 131 >gi|62858571|ref|NP_001016358.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] gi|161611793|gb|AAI55979.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] gi|166796647|gb|AAI59393.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis] Length = 152 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|84489671|ref|YP_447903.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091] gi|121722917|sp|Q2NFZ3|RS13_METST RecName: Full=30S ribosomal protein S13P gi|84372990|gb|ABC57260.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091] Length = 153 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI ++ + AL I GIG + IC L + + ++ + + V QI + Sbjct: 9 MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + +E DL T+ ++ R+ + Y+G RH GLPV Sbjct: 69 ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R G Sbjct: 129 RGQRTKSTFRHGSSVG 144 >gi|326625162|gb|EGE31507.1| Ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 85 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 I ++ +L E ++ +R + + + VEGDLRR ++M+IKRLMDLGCYRGLRHR Sbjct: 1 MAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHR 59 Query: 94 RGLPVRGQRTHTNARTRKKFGKGG 117 RGLPVRGQRT TNARTRK K Sbjct: 60 RGLPVRGQRTKTNARTRKGPRKPI 83 >gi|302782790|ref|XP_002973168.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii] gi|300158921|gb|EFJ25542.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii] Length = 156 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 29/148 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGC----YRGLRHRR 94 Q V L + +++RL + +RGLRH Sbjct: 72 ANPRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRQAYSDHRGLRHYW 131 Query: 95 GLPVRGQRTHTNARTRKKFGKGGVARKR 122 GL VRGQ T T R + GV++KR Sbjct: 132 GLRVRGQHTKTTERRGRTV---GVSKKR 156 >gi|225703456|gb|ACO07574.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+RK+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152 >gi|167378734|ref|XP_001734909.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|167381370|ref|XP_001735684.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|183231655|ref|XP_654098.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|183233172|ref|XP_653090.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|165902209|gb|EDR28096.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] gi|165903334|gb|EDR28910.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] gi|169801707|gb|EAL47704.2| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] gi|169802392|gb|EAL48712.2| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] Length = 155 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I + Sbjct: 13 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72 Query: 61 EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +I+ L + +RGLRH GL V Sbjct: 73 NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+R + Sbjct: 133 RGQHTKTTGRRGRTV---GVSRTK 153 >gi|294658981|ref|XP_461313.2| DEHA2F22308p [Debaryomyces hansenii CBS767] gi|202953527|emb|CAG89714.2| DEHA2F22308p [Debaryomyces hansenii] Length = 165 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI +++ AL I G+G + S +C K + ++R +L + E+ +I ++ Sbjct: 37 LLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNP 96 Query: 64 ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + + +L + +++RL + +RG+RH GL VRGQ Sbjct: 97 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQ 156 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 157 HTKTTSRGR 165 >gi|327304315|ref|XP_003236849.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892] gi|326459847|gb|EGD85300.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892] Length = 147 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + P + V +AL GIG + + I P V +L +V+ + A+ Sbjct: 29 MVFILGTSFPERQLVRKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 88 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 89 S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 142 >gi|327311848|ref|YP_004338745.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20] gi|326948327|gb|AEA13433.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20] Length = 156 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ AK V AL I GIG S+ IC +L + P + L E ++ ++ A+ Sbjct: 7 IVRVGDTDLEGAKAVAFALARIKGIGISSAFAICRRLGVDPYAPLGSLSEEQISKLDWAV 66 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++ + +L +I + L ++G+RH GL VR Sbjct: 67 RNLHEIAPAWFLNRRRDPVSGRDVHLIGSELILAAKSDIDLMKKLRSWKGMRHAAGLKVR 126 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT T R GVA+K+ Sbjct: 127 GQRTVTTGRFGPT---AGVAKKK 146 >gi|221122256|ref|XP_002155929.1| PREDICTED: similar to ribosomal protein S18 isoform 1 [Hydra magnipapillata] gi|221122258|ref|XP_002155978.1| PREDICTED: similar to ribosomal protein S18 isoform 2 [Hydra magnipapillata] Length = 155 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + S K I ++R +L + EV ++ + Sbjct: 12 ILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDYFLNRQKDIKDGKYTQVLANALDNKLREDLERLKKIKAHRGLRHYWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRKGRTV---GVSKKK 152 >gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii] Length = 184 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++++ AL I G+G + S +C K + +R ++ +V ++ + Sbjct: 44 ILRVMNTNIDGRRKIMFALTAIKGVGRRYSNVVCKKADVDLTKRAXKISAIQVEKLITIM 103 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + +L + +++R+ + +RGLRH GL V Sbjct: 104 SNPRQYKIPDWFLNRQKDVKDGKYSQVLANNLDNKLREDLERMKKIRAHRGLRHYWGLRV 163 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 164 RGQHTKTTGRRGRTV---GVSKKK 184 >gi|198578|gb|AAA16796.1| ribosomal protein [Mus musculus] Length = 152 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLHNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|145512882|ref|XP_001442352.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124409705|emb|CAK74955.1| unnamed protein product [Paramecium tetraurelia] Length = 150 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 20/139 (14%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 ----------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 ++YQV +L + +++R+ + C RGLRH GL VRGQ T Sbjct: 74 KSPRSLQHFQDEISRDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRVRGQHT 133 Query: 104 HTNARTRKKFGKGGVARKR 122 T R + GV RK+ Sbjct: 134 KTTGRGGQTL---GVERKK 149 >gi|291334094|gb|ADD93766.1| putative ribosomal protein S13/S18 [uncultured marine bacterium MedDCM-OCT-S05-C222] Length = 155 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A ++ K + AL + G+G +++ IC P L + +R+AI Sbjct: 16 ILRMADTDMDGLKTLATALTAVKGVGPRTAIQICKNTGFDPASLAGHLSAEQQETLREAI 75 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + + T +I RL + CYRG+RH G VR Sbjct: 76 EGYAETVPLWMLNRQRDLETGDELHLTGQQVSLTFEDDINRLRTMKCYRGVRHASGNKVR 135 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQR +N R GV+RK+ Sbjct: 136 GQRGRSNGRGGLTL---GVSRKK 155 >gi|225704576|gb|ACO08134.1| 40S ribosomal protein S18 [Oncorhynchus mykiss] Length = 152 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKRIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|124486067|ref|YP_001030683.1| 30S ribosomal protein S13P [Methanocorpusculum labreanum Z] gi|158706246|sp|A2SSW0|RS13_METLZ RecName: Full=30S ribosomal protein S13P gi|124363608|gb|ABN07416.1| SSU ribosomal protein S13P [Methanocorpusculum labreanum Z] Length = 150 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ + V AL I GIG ++ I + + + L + +V I + + Sbjct: 10 FVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQV 69 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + DL +I + + CYRG+RH GL VR Sbjct: 70 KAYPASVPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVR 129 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT R K GV+++R Sbjct: 130 GQRTKATGRFGKIV---GVSKRR 149 >gi|222480228|ref|YP_002566465.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239] gi|222453130|gb|ACM57395.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239] Length = 174 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI G ++ K V R+L + GIG ++++ + K + L E ++ + Sbjct: 20 FVRIGGADLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDAVVDIA 79 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + V D+ +I R+ + Y+G+RH+RG VR Sbjct: 80 ENLEDHVPSWMTNRQNDFYSGETTHLVGTDVSEKRRHDINRMKIIESYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R+ G Sbjct: 140 GQRTKSTGRSEGTIG 154 >gi|294872965|ref|XP_002766467.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294881108|ref|XP_002769248.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294951469|ref|XP_002786996.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|294956183|ref|XP_002788842.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239867347|gb|EEQ99184.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239872526|gb|EER01966.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239901586|gb|EER18792.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] gi|239904454|gb|EER20638.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983] Length = 149 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 22/128 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI N+ +V AL I GIG + + IC K + +R +L + E+ +I Q I Sbjct: 15 RICNTNVDGRVKVAYALTAIKGIGRRFATLICKKCEVDTNKRAGELTQEEIQKIVQVISN 74 Query: 63 DYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q L + +++R+ + +RGLRH G+ VRG Sbjct: 75 PQQFRIPQWFLNRQHDPVDGTYSQKYSNLLDASKREDLERMKKMRLHRGLRHYWGIRVRG 134 Query: 101 QRTHTNAR 108 Q T T+ R Sbjct: 135 QHTKTSGR 142 >gi|88604135|ref|YP_504313.1| 30S ribosomal protein S13P [Methanospirillum hungatei JF-1] gi|121721492|sp|Q2FT96|RS13_METHJ RecName: Full=30S ribosomal protein S13P gi|88189597|gb|ABD42594.1| SSU ribosomal protein S13P [Methanospirillum hungatei JF-1] Length = 151 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V+ +L I G+G +++ I + + +L E+ V +IR+ + Sbjct: 11 FVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVV 70 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + + D+ TV +I L + YRG+RH G VR Sbjct: 71 SNYADRIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVR 130 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + RT GV RK+ Sbjct: 131 GQRTKSTGRTGLIV---GVKRKK 150 >gi|76780570|emb|CAD92015.1| mitochondrial ribosomal protein RPS13 [Paris quadrifolia] Length = 116 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 61/112 (54%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I+G ++V A I GIG + + +L + ++++L + + Q+ Q I Sbjct: 1 MLYISGARSVPDEQVRIASTNIDGIGPTKAILVRYRLGVSGNIKMNELTKYHIDQLEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ +L+R ++ RL+ + YRG+ H+ G P+RG RTHTNA T +K Sbjct: 61 GQDHVGHWELKRGERADLDRLISISRYRGIHHQDGSPLRGHRTHTNAGTFRK 112 >gi|148700464|gb|EDL32411.1| mCG116671 [Mus musculus] Length = 152 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|284165825|ref|YP_003404104.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511] gi|284015480|gb|ADB61431.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511] Length = 174 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V R+L ++G+G ++++ I ++ + +L + + ++ + + Sbjct: 18 FVRIGQTDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETV 77 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E +++ DL+ T +I R+ + Y+G RH+RG VR Sbjct: 78 ENYAEEVPDWLNNRQSDFYTGETTHEIGNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVR 137 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 138 GQRTKSTGRTEGTIG 152 >gi|68471071|ref|XP_720312.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314] gi|77022566|ref|XP_888727.1| hypothetical protein CaO19_7018 [Candida albicans SC5314] gi|46442174|gb|EAL01465.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314] gi|76573540|dbj|BAE44624.1| hypothetical protein [Candida albicans] Length = 135 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI +++ AL I G+G + + +C K + +R +L + E+ +I ++ Sbjct: 7 LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 66 Query: 64 ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + + +L + +++RL + +RG+RH GL VRGQ Sbjct: 67 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 126 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 127 HTKTTSRGR 135 >gi|62989789|emb|CAD91287.1| mitochondrial ribosomal protein RPS13 [Monophyllorchis sp. Cassio C282] Length = 116 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 66/112 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GI K + + +L I ++ +L +S++ QI Q I Sbjct: 1 MSYISGARSFPDEQVRIASTKMDGIAHKKAMKVRYRLGISGNIKMTELTKSQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 QD+ V +L+R +I+R + L YRG+RH+ G P+RGQRTHT ART +K Sbjct: 61 SQDHVVHWELKRGERADIERSISLSRYRGIRHQDGSPLRGQRTHTIARTCRK 112 >gi|84394568|ref|ZP_00993272.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01] gi|84374788|gb|EAP91731.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01] Length = 82 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 1/83 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I + ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83 + Y VEGDLRR V+MNIKRLMD Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMD 82 >gi|6755368|ref|NP_035426.1| 40S ribosomal protein S18 [Mus musculus] gi|11968182|ref|NP_072045.1| 40S ribosomal protein S18 [Homo sapiens] gi|47087103|ref|NP_998722.1| 40S ribosomal protein S18 [Rattus norvegicus] gi|47522714|ref|NP_999105.1| 40S ribosomal protein S18 [Sus scrofa] gi|75812924|ref|NP_001028786.1| 40S ribosomal protein S18 [Bos taurus] gi|189339186|ref|NP_001041547.1| 40S ribosomal protein S18 [Canis lupus familiaris] gi|55626404|ref|XP_518400.1| PREDICTED: similar to ribosomal protein [Pan troglodytes] gi|114606875|ref|XP_001170296.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes] gi|149732112|ref|XP_001497114.1| PREDICTED: similar to ribosomal protein S18 [Equus caballus] gi|291396021|ref|XP_002714578.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus] gi|291408932|ref|XP_002720764.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus] gi|293340584|ref|XP_002724624.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|293351981|ref|XP_002727879.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|296197873|ref|XP_002746441.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus] gi|297661285|ref|XP_002809198.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] gi|301757095|ref|XP_002914379.1| PREDICTED: 40S ribosomal protein S18-like [Ailuropoda melanoleuca] gi|50403620|sp|P62271|RS18_RAT RecName: Full=40S ribosomal protein S18 gi|50403625|sp|P62269|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3 gi|54039371|sp|P62272|RS18_PIG RecName: Full=40S ribosomal protein S18 gi|54039385|sp|P62270|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3; Short=Ke3 gi|62900940|sp|Q5TJE9|RS18_CANFA RecName: Full=40S ribosomal protein S18 gi|91207636|sp|Q3T0R1|RS18_BOVIN RecName: Full=40S ribosomal protein S18 gi|206558173|sp|A5JST6|RS18_CAPHI RecName: Full=40S ribosomal protein S18 gi|187609266|pdb|2ZKQ|MM Chain m, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map gi|198580|gb|AAA16795.1| ribosomal protein [Mus musculus] gi|433447|emb|CAA40750.1| ribosomal protein S18 [Rattus rattus] gi|1841304|dbj|BAA19211.1| ribosomal protein [Sus scrofa] gi|3811382|gb|AAC69898.1| ribosomal protein subunit S18 [Mus musculus] gi|3820980|emb|CAA20231.1| ribosomal protein S18 [Homo sapiens] gi|4050105|gb|AAC97978.1| RPS18 [Mus musculus] gi|6006558|emb|CAB56794.1| ribosomal protein S18 [Homo sapiens] gi|26341376|dbj|BAC34350.1| unnamed protein product [Mus musculus] gi|46237544|emb|CAE83925.1| ribosomal protein S18 [Rattus norvegicus] gi|51980402|gb|AAH81459.1| Ribosomal protein S18 [Mus musculus] gi|51980469|gb|AAH81458.1| Ribosomal protein S18 [Mus musculus] gi|55956952|emb|CAI11439.1| ribosomal protein S18 [Canis lupus familiaris] gi|55961242|emb|CAI17530.1| ribosomal protein S18 [Homo sapiens] gi|55961291|emb|CAI18076.1| ribosomal protein S18 [Homo sapiens] gi|55961522|emb|CAI18127.1| ribosomal protein S18 [Homo sapiens] gi|55961771|emb|CAI17656.1| ribosomal protein S18 [Homo sapiens] gi|57209749|emb|CAI41848.1| ribosomal protein S18 [Homo sapiens] gi|62533209|gb|AAH93500.1| Ribosomal protein S18 [Mus musculus] gi|72679475|gb|AAI00605.1| Ribosomal protein S18 [Mus musculus] gi|74141885|dbj|BAE41010.1| unnamed protein product [Mus musculus] gi|74195924|dbj|BAE30520.1| unnamed protein product [Mus musculus] gi|74226926|dbj|BAE27106.1| unnamed protein product [Mus musculus] gi|74268023|gb|AAI02294.1| Ribosomal protein S18 [Bos taurus] gi|75517276|gb|AAI01787.1| Ribosomal protein S18 [Homo sapiens] gi|75517910|gb|AAI01789.1| Ribosomal protein S18 [Homo sapiens] gi|76779249|gb|AAI06064.1| Ribosomal protein S18 [Homo sapiens] gi|117558483|gb|AAI26073.1| Ribosomal protein S18 [Rattus norvegicus] gi|119624100|gb|EAX03695.1| ribosomal protein S18, isoform CRA_b [Homo sapiens] gi|147744669|gb|ABQ51201.1| ribosomal protein S18 [Capra hircus] gi|148678285|gb|EDL10232.1| mCG23000, isoform CRA_b [Mus musculus] gi|149043391|gb|EDL96842.1| rCG60872, isoform CRA_a [Rattus norvegicus] gi|168985411|emb|CAQ08021.1| ribosomal protein S18 [Homo sapiens] gi|168985731|emb|CAQ08251.1| ribosomal protein S18 [Homo sapiens] gi|197127178|gb|ACH43676.1| putative ribosomal protein S18 [Taeniopygia guttata] gi|296474555|gb|DAA16670.1| 40S ribosomal protein S18 [Bos taurus] gi|307685871|dbj|BAJ20866.1| ribosomal protein S18 [synthetic construct] Length = 152 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|281338468|gb|EFB14052.1| hypothetical protein PANDA_002275 [Ailuropoda melanoleuca] Length = 152 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|268164091|ref|YP_003288868.1| ribosomal protein S13 [Saccharina coriacea] gi|262318401|dbj|BAI48720.1| ribosomal protein S13 [Saccharina coriacea] Length = 119 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|209738282|gb|ACI70010.1| 40S ribosomal protein S18 [Salmo salar] Length = 152 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV + + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVEGVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|242019380|ref|XP_002430139.1| ribosomal protein S18, putative [Pediculus humanus corporis] gi|212515230|gb|EEB17401.1| ribosomal protein S18, putative [Pediculus humanus corporis] Length = 137 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 25/140 (17%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 NI ++V+ A+ I G+G + + + K I ++R + E EV +I + Sbjct: 1 MNTNIDGKRKVMFAMTSIKGVGRRFANIVLKKADIDLDKRAGECSEEEVDKIITVLTNPR 60 Query: 65 Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 Q +L + +++RL + +RG+RH GL VRGQ Sbjct: 61 QYKIPDWFLNRQKDIQDGKYSQLTSTNLDSKLREDLERLKKIKAHRGMRHYWGLRVRGQH 120 Query: 103 THTNARTRKKFGKGGVARKR 122 T T R + GV++K+ Sbjct: 121 TKTTGRRGRTV---GVSKKK 137 >gi|126179743|ref|YP_001047708.1| 30S ribosomal protein S13P [Methanoculleus marisnigri JR1] gi|158706247|sp|A3CWH6|RS13_METMJ RecName: Full=30S ribosomal protein S13P gi|125862537|gb|ABN57726.1| SSU ribosomal protein S13P [Methanoculleus marisnigri JR1] Length = 149 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V AL I GIG +S+ I A+ P + +L + V +I A+ Sbjct: 9 FVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAV 68 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + + DL ++ R+ + YRG+RH G VR Sbjct: 69 DTYTEQVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVR 128 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + RT GV RK+ Sbjct: 129 GQRTKSTGRTGTTV---GVKRKK 148 >gi|307352909|ref|YP_003893960.1| 30S ribosomal protein S13P [Methanoplanus petrolearius DSM 11571] gi|307156142|gb|ADN35522.1| ribosomal protein S13P [Methanoplanus petrolearius DSM 11571] Length = 148 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+ ++ K V AL + GIG +S I + P + L E V +IR+ + Sbjct: 9 FVRVENTDLDGTKSVQVALTGLAGIGMHTSVSIAQMAGVDPRATLGLLEEDVVDRIREVV 68 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + DLR V ++ R+ + CYRG+RH VR Sbjct: 69 SGYTEKVPAWMLNRQKDVYTGEAKQLLGTDLRMAVDDDVNRMRKIRCYRGIRHETHQKVR 128 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV++K+ Sbjct: 129 GQRTKSTGRHGATV---GVSKKK 148 >gi|159476746|ref|XP_001696472.1| ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii] gi|158282697|gb|EDP08449.1| ribosomal protein S18 [Chlamydomonas reinhardtii] Length = 153 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + S +C K + +R + E+ ++ + Sbjct: 13 ILRLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIV 72 Query: 61 ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++D++ L + +++RL + +RGLRH GL V Sbjct: 73 ANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GVA+K+ Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153 >gi|2129263|pir||F64323 ribosomal protein S18 - Methanococcus jannaschii Length = 186 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49 R++ ++ K+++ AL I+G+G ++ I + P + L Sbjct: 47 RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLAD 106 Query: 50 ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 S + R+ E + +E DL +I RL + CYRG+RH GLP RG Sbjct: 107 PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 166 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+R++ Sbjct: 167 QRTKSTFRRGPTV---GVSRRK 185 >gi|145539402|ref|XP_001455391.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423199|emb|CAK87994.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLSKRAGELTDDEAHKITEVI 73 Query: 61 ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV RK+ Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154 >gi|309262972|ref|XP_003085935.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|148668546|gb|EDL00865.1| mCG114988 [Mus musculus] Length = 152 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGQTV---GVSKKK 152 >gi|145479337|ref|XP_001425691.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145534229|ref|XP_001452859.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124392763|emb|CAK58293.1| unnamed protein product [Paramecium tetraurelia] gi|124420558|emb|CAK85462.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV RK+ Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154 >gi|55376996|ref|YP_134846.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049] gi|266965|sp|Q00861|RS13_HALMA RecName: Full=30S ribosomal protein S13P; AltName: Full=HmaS13 gi|148770|gb|AAA73209.1| ribosomal protein HmaS13 [Haloarcula marismortui] gi|55229721|gb|AAV45140.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049] Length = 177 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL ++GIG ++++ I K + +L + + ++ + + Sbjct: 23 FVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERV 82 Query: 61 EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++ DL+ T +I R+ + YRG+RH+RG VR Sbjct: 83 ENFADDVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVR 142 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 143 GQRTKSTGRTEGTIG 157 >gi|68479427|ref|XP_716245.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|68479596|ref|XP_716162.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|46437820|gb|EAK97160.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] gi|46437908|gb|EAK97247.1| potential mitochondrial ribosomal protein S13 [Candida albicans SC5314] Length = 122 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + G +I V L I GIG+++++ + K+ I P R++QL E +++ + + I Q Sbjct: 5 VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 VEG L+ + +IK +G Y G RH G PVRGQRT TN T ++ + Sbjct: 65 -LLVEGHLKHKINNDIKMKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117 >gi|302829312|ref|XP_002946223.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] gi|300269038|gb|EFJ53218.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox carteri f. nagariensis] Length = 153 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + S +C K + +R + E+ ++ + Sbjct: 13 ILRLLNTNVDGKNKIMYAMTAIKGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIV 72 Query: 61 ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++D++ L + +++RL + +RGLRH GL V Sbjct: 73 ANPRAYKIPDWFLNRQKDHKTGRYSQLTSSGLDTALRDDLERLKKIRNHRGLRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GVA+K+ Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153 >gi|300521596|gb|ADK26009.1| r-protein S13p [Candidatus Nitrososphaera gargensis] Length = 215 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIAG +I +K+V+ A+ I GIG+ +Q + L I P++RV L +SE+ ++ QAI Sbjct: 11 ILRIAGKDIEGSKKVIVAVSEIKGIGYNFAQVLTQTLNINPDKRVGFLTDSELGELEQAI 70 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + DL + +I+R + +RG RH GL V Sbjct: 71 AHPDKAGVPAWYLNRRKNMDTGSNHHMITSDLDFASSNDIEREKMVMSWRGYRHMFGLRV 130 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R K G GV + + Sbjct: 131 RGQRTRTTGR---KGGAVGVKKVK 151 >gi|293347481|ref|XP_002726601.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|330506853|ref|YP_004383281.1| 30S ribosomal protein S13p/S18e [Methanosaeta concilii GP-6] gi|328927661|gb|AEB67463.1| ribosomal protein S13p/S18e [Methanosaeta concilii GP-6] Length = 181 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ ++V AL I G+G + ++ + + P + L ++E+ ++++ + Sbjct: 29 IVRILNTDLAGKRQVHMALTGIKGVGRRCAKIFTERAGVDPNATLGLLPDAEIDKLKKVV 88 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E+D + + DL T+ ++ + + Y+GLRH RGL V Sbjct: 89 EEDAINILPVWMVNRRGDIETGKDIHIMGMDLNMTLREDLDLMKKMRSYKGLRHERGLRV 148 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T + RT GV+RKR Sbjct: 149 RGQKTRSTGRTG---AIVGVSRKR 169 >gi|313200103|ref|YP_004038761.1| 30S ribosomal protein S13 [Methylovorus sp. MP688] gi|312439419|gb|ADQ83525.1| ribosomal protein S13 [Methylovorus sp. MP688] Length = 86 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 1/86 (1%) Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + ++ L ++EV ++R + + +VEGDLRR V MNIKRLMDLGCYRG+RHRRG Sbjct: 2 AAGVAGTAKIKDLNDAEVEKLRDEVAK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRG 60 Query: 96 LPVRGQRTHTNARTRKKFGKGGVARK 121 LPVRGQRT TNARTRK K A K Sbjct: 61 LPVRGQRTKTNARTRKGPIKPIKASK 86 >gi|326482074|gb|EGE06084.1| 40S ribosomal protein S13 [Trichophyton equinum CBS 127.97] Length = 200 Score = 111 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G + P + V +AL GIG + + I P V +L +V+ + A+ Sbjct: 82 MVFILGTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 141 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + ++E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 142 S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 195 >gi|15150734|ref|NP_150400.1| ribosomal protein S13 [Pylaiella littoralis] gi|15147740|emb|CAC50841.1| ribosomal protein S13 [Pylaiella littoralis] Length = 119 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G +IP K +V+++ +I+G+G S +C K + R + S+ + Sbjct: 1 MPYIVGTSIPEDKVLVQSVGHIYGLGLTQSISLCKKAGFGSDSRGRHISFSKGKLLGNLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR IKRL L YRG RHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFTHDKIKRLCSLSTYRGSRHRKGLPVRGQRTHTNAKKR 111 >gi|255731334|ref|XP_002550591.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404] gi|240131600|gb|EER31159.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404] Length = 133 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 22/129 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI +++ AL I G+G + + +C K + +R +L + E+ +I ++ Sbjct: 5 LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 64 Query: 64 ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 + + +L + +++RL + +RG+RH GL VRGQ Sbjct: 65 TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 124 Query: 102 RTHTNARTR 110 T T +R R Sbjct: 125 HTKTTSRGR 133 >gi|145483041|ref|XP_001427543.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394625|emb|CAK60145.1| unnamed protein product [Paramecium tetraurelia] Length = 155 Score = 111 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +R+ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73 Query: 61 ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++YQV +L + +++R+ + C RGLRH GL V Sbjct: 74 KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV RK+ Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154 >gi|268053547|ref|YP_003288906.1| ribosomal protein S13 [Saccharina japonica] gi|268053586|ref|YP_003288944.1| ribosomal protein S13 [Saccharina religiosa] gi|268053625|ref|YP_003288982.1| ribosomal protein S13 [Saccharina ochotensis] gi|268053664|ref|YP_003289059.1| ribosomal protein S13 [Saccharina diabolica] gi|268053703|ref|YP_003289110.1| ribosomal protein S13 [Saccharina longipedalis] gi|262318167|dbj|BAI48492.1| ribosomal protein S13 [Saccharina japonica] gi|262318206|dbj|BAI48530.1| ribosomal protein S13 [Saccharina religiosa] gi|262318245|dbj|BAI48568.1| ribosomal protein S13 [Saccharina ochotensis] gi|262318284|dbj|BAI48606.1| ribosomal protein S13 [Saccharina diabolica] gi|262318323|dbj|BAI48644.1| ribosomal protein S13 [Saccharina longipedalis] Length = 119 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|74197062|dbj|BAE35083.1| unnamed protein product [Mus musculus] gi|74204663|dbj|BAE35401.1| unnamed protein product [Mus musculus] Length = 152 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIRGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|325958562|ref|YP_004290028.1| 30S ribosomal protein S13P [Methanobacterium sp. AL-21] gi|325329994|gb|ADZ09056.1| ribosomal protein S13P [Methanobacterium sp. AL-21] Length = 149 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI+ ++ K + AL I GIG S+ +C ++ L + +V+++ +A+ Sbjct: 8 MVRISRKDVDGKKTIENALADIKGIGRALSRALCQVAGFDATMQIGYLPDKDVLKLEEAV 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +E DL + ++ R+ Y+G RH GLPV Sbjct: 68 KAPQQFELPEWMLNRRNDYETGETVHLIESDLTMRLRDDLNRMKKTRSYKGRRHEVGLPV 127 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R K G Sbjct: 128 RGQRTKSTFRKGKSVG 143 >gi|320170357|gb|EFW47256.1| ribosomal protein S18 [Capsaspora owczarzaki ATCC 30864] Length = 152 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ AL I G+G + S +C K I ++R ++ E+EV ++ + Sbjct: 12 ILRMLNTNIDGKVKIPFALTKIKGVGRRYSNLVCKKADIDLKKRAGEVNEAEVERLLSIL 71 Query: 61 EQD--YQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Y++ L + +I+RL + +RGLRH G+ V Sbjct: 72 QNPRSYKIPDWFLNRQKDIVDGKTSQVLSNGLDNKLREDIERLKKIRAHRGLRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV K+ Sbjct: 132 RGQHTKTTGRHGRTV---GVGAKK 152 >gi|241959230|ref|XP_002422334.1| mitochondrial ribosomal protein of the small ribosomal subunit, putative [Candida dubliniensis CD36] gi|223645679|emb|CAX40340.1| mitochondrial ribosomal protein of the small ribosomal subunit, putative [Candida dubliniensis CD36] Length = 122 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + G +I V L I GIG+++++ + K+ I P R++QL E +++ + + I Q Sbjct: 5 VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 VEG L+ + +IK +G Y G RH G PVRGQRT TN T ++ + Sbjct: 65 -LLVEGHLKHKINNDIKLKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117 >gi|156936975|ref|YP_001434771.1| 30S ribosomal protein S13P [Ignicoccus hospitalis KIN4/I] gi|156565959|gb|ABU81364.1| SSU ribosomal protein S13P [Ignicoccus hospitalis KIN4/I] Length = 152 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 25/143 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI +I + V L I GIG+ ++ I KL I P R+ L E+ + ++ + + Sbjct: 11 IVRIGDTDIDGSLPAVYGLAKIKGIGYTTALAILRKLGIDPHMRLGYLSETRIRELDEKV 70 Query: 61 ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY DL +I+R + +RGLRH GL V Sbjct: 71 RDITQLGFPSWLYNRRKDYTTGKDLHLIGADLVFYARQDIEREKRIKSWRGLRHSLGLKV 130 Query: 99 RGQRTHTNARTRKKFGKGGVARK 121 RGQRT T R GV++K Sbjct: 131 RGQRTATTGRLGMTV---GVSKK 150 >gi|46126121|ref|XP_387614.1| hypothetical protein FG07438.1 [Gibberella zeae PH-1] Length = 119 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN K V +AL + +G +S I K +I +V L V I + Sbjct: 1 MVFLLGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSITAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 Q +E D RR V NI+RL D+G YRG RH GLPVRGQRT T + + + Sbjct: 61 SQ-MTIETDARRLVQENIRRLKDMGSYRGRRHAMGLPVRGQRTRTQTASANRLNR 114 >gi|293453617|ref|ZP_06664036.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088] gi|291321743|gb|EFE61174.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088] Length = 85 Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 1/84 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 I + ++ +L E ++ +R + + + VEGDLRR ++M+IKRLMDLGCYRGLRHR Sbjct: 1 MAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHR 59 Query: 94 RGLPVRGQRTHTNARTRKKFGKGG 117 RGLPVRGQRT TNARTRK K Sbjct: 60 RGLPVRGQRTKTNARTRKGPRKPI 83 >gi|268164052|ref|YP_003288817.1| ribosomal protein S13 [Saccharina angustata] gi|262318362|dbj|BAI48682.1| ribosomal protein S13 [Saccharina angustata] Length = 119 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ +I+GIG S+ +C K + R + + + Sbjct: 1 MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGRNLENLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL L YRGLRHR+GLPVRGQRTHTNA+ R Sbjct: 61 EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111 >gi|171693473|ref|XP_001911661.1| hypothetical protein [Podospora anserina S mat+] gi|170946685|emb|CAP73488.1| unnamed protein product [Podospora anserina S mat+] Length = 119 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 3/121 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GVN AK V +AL + + +G +++ I K +I P ++ L V + + Sbjct: 1 MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +E D R+ + NIKRL D+G YRG RH LPVRGQRT +T K + V R Sbjct: 61 ST-MVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNR--VER 117 Query: 121 K 121 K Sbjct: 118 K 118 >gi|159041085|ref|YP_001540337.1| 30S ribosomal protein S13P [Caldivirga maquilingensis IC-167] gi|157919920|gb|ABW01347.1| ribosomal protein S13 [Caldivirga maquilingensis IC-167] Length = 162 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + I ++ +K V AL I GIG ++ IC L I P ++ +L E + +I A+ Sbjct: 10 IVHIGDTDLDGSKAVAYALARIKGIGVSTAVAICRNLGINPLVKLGELNEEMIRKIDWAV 69 Query: 61 EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +Q + DL T +I+R + +RG+RH GL VR Sbjct: 70 RNLHQAAPAWFVNRPKDPETGRNIHLIGADLILTARNDIERERRILSWRGIRHNLGLKVR 129 Query: 100 GQRTHTNAR 108 GQRT T R Sbjct: 130 GQRTRTTGR 138 >gi|109073773|ref|XP_001099137.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] gi|109073775|ref|XP_001099240.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] gi|297292315|ref|XP_002804060.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] gi|297292317|ref|XP_002804061.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] Length = 152 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRQKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T R + GV++K+ Sbjct: 132 RGQHAKTTGRCGRTV---GVSKKK 152 >gi|238880236|gb|EEQ43874.1| conserved hypothetical protein [Candida albicans WO-1] Length = 122 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + G +I V L I GIG+++++ + K+ I P R++QL E +++ + + I Q Sbjct: 5 VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 VEG L+ + +IK +G Y G RH G PVRGQRT TN T ++ + Sbjct: 65 -LLVEGHLKHKIINDIKMKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117 >gi|109097924|ref|XP_001085646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca mulatta] gi|297263054|ref|XP_002798738.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] gi|297263056|ref|XP_002798739.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] Length = 152 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIYGQRKIAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + +Q + L + +++RL + +RGL H GL V Sbjct: 72 QNPHQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|145932363|ref|YP_001165412.1| ribosomal protein S13 [Phytophthora sojae] gi|110169606|gb|ABG54072.1| ribosomal protein S13 [Phytophthora sojae] Length = 137 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 36/109 (33%), Positives = 64/109 (58%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTILYGINEYQSKKICKNIGINPQITLNKLKNNHVNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++ +VE L+++ + L+++ RG+R +GLPVRGQRTHTNA+T Sbjct: 61 NKNLKVEQFLKKSKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNAKT 109 >gi|15790213|ref|NP_280037.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1] gi|169235942|ref|YP_001689142.1| 30S ribosomal protein S13P [Halobacterium salinarum R1] gi|13124533|sp|Q9V2W4|RS13_HALSA RecName: Full=30S ribosomal protein S13P; AltName: Full=HS13 gi|6172227|dbj|BAA85895.1| ribosomal protein HS13 [Halobacterium salinarum] gi|10580671|gb|AAG19517.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1] gi|167727008|emb|CAP13794.1| ribosomal protein S13 [Halobacterium salinarum R1] Length = 171 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ K V RAL + G+G + ++ + ++ + + L + + + A+ Sbjct: 16 FVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAV 75 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + D+ T +I R+ + Y+G+RH RG VR Sbjct: 76 DSFTEHAPAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVR 135 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 136 GQRTKSTGRTEGTIG 150 >gi|293359376|ref|XP_002729551.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R GV++K+ Sbjct: 132 RGQHTKTTGRRGHTV---GVSKKK 152 >gi|50261289|ref|YP_052897.1| ribosomal protein S13 [Saprolegnia ferax] gi|48237602|gb|AAT40651.1| ribosomal protein S13 [Saprolegnia ferax] Length = 117 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 66/117 (56%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I + ++ +L ++GI S+ IC + I P+ +++L ++++ ++ I Sbjct: 1 MLYIFDKAISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 ++ ++E L++ N L+++ RG+RH GLPVRGQRTHTNA+T KK Sbjct: 61 NKNIKIEQLLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKLKNTI 117 >gi|255727707|ref|XP_002548779.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404] gi|240133095|gb|EER32651.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404] Length = 122 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + G +I V L I GIG+++++ + K+ I P R++QL E +++ + + I Q Sbjct: 5 VFGKSIKHNFPVRIGLAKAIFGIGYQTAEKLMAKVGIYPNCRMNQLSEPQIMDLNKEISQ 64 Query: 63 DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 VEG L++ + +IK G Y G RH G PV GQRT TNA T +K K Sbjct: 65 -LLVEGHLKQKINNDIKLKRTTGSYAGSRHALGFPVHGQRTRTNASTARKLNK 116 >gi|113170478|ref|YP_717269.1| Rps13 [Ostreococcus tauri] gi|112806885|emb|CAL36391.1| unnamed protein product [Ostreococcus tauri] Length = 116 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 61/116 (52%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + + + + L I+GI + IC++L + V L + ++ + + Sbjct: 1 MVFLFQKKLTPTNTIRKELKKIYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + Y E DL++ V N +R + +GCYRG R + LP+RGQRTHTNA+T K+ + Sbjct: 61 QYYYLTEHDLKKQVQGNFQRFIQIGCYRGFRVTQRLPLRGQRTHTNAKTAKRILRA 116 >gi|119600195|gb|EAW79789.1| hCG1777176, isoform CRA_b [Homo sapiens] Length = 152 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|67478589|ref|XP_654681.1| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS] gi|167379766|ref|XP_001735274.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760] gi|56471746|gb|EAL49291.1| 40S ribosomal protein S18, putative [Entamoeba histolytica HM-1:IMSS] gi|165902807|gb|EDR28533.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760] Length = 143 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I + Sbjct: 1 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 60 Query: 61 EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +I+ L + +RGLRH GL V Sbjct: 61 NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 120 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+R + Sbjct: 121 RGQHTKTTGRRGRTV---GVSRTK 141 >gi|261403748|ref|YP_003247972.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7] gi|261370741|gb|ACX73490.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7] Length = 154 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 25/143 (17%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60 R++ +I K+++ AL I+G+G ++ I + P++ L E E+ +I + + Sbjct: 14 VRVSRTDIDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTEEEIKKIEEVLI 73 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + +E DL +I RL + CYRG+RH GLP R Sbjct: 74 DPAKFGIPSWMFNRRKDYITGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCR 133 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R GV+R++ Sbjct: 134 GQRTKSTFRRGPTV---GVSRRK 153 >gi|84508569|ref|YP_448617.1| ribosomal protein S13 [Fucus vesiculosus] gi|39653292|gb|AAR29311.1| ribosomal protein S13 [Fucus vesiculosus] Length = 119 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 1/111 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G IP K +V+++ I+GIG S+ +C K + R + S+ + Sbjct: 1 MPFIIGTPIPEDKILVQSVSQIYGIGLSQSKILCRKAGFGQDCRGKNVSFSQGKILGNLA 60 Query: 61 EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 E + DLRR I+RL + YRGLRH++GLP RGQRTHTNA+ R Sbjct: 61 ENTSLFLGSDLRRFHNDKIRRLCLMSSYRGLRHKKGLPARGQRTHTNAKKR 111 >gi|157361543|gb|ABV44729.1| 40S ribosomal protein S18-like protein [Phlebotomus papatasi] Length = 152 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R NI ++V A+ I G+G + + K + +R + + EV ++ I Sbjct: 12 ILRFMNTNIDGKRKVPIAMTAIKGVGRRYANIALKKADVDLSKRAGECTDEEVERVVAVI 71 Query: 61 EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRIYKIPDWFLNRQKDVTDGKYYQLTSAVLESKLRDDLERLKKICAHRGLRHHWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|282931915|ref|ZP_06337387.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|282932825|ref|ZP_06338225.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|281303054|gb|EFA95256.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] gi|281303967|gb|EFA96097.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1] Length = 86 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%) Query: 31 QDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90 + IC + + R L + ++R +++ Y+VEGDLRR ++MNIKRL+D+G YRG+ Sbjct: 1 KKICADAGVSEDIRSKDLTPEDQEKLRAEVDK-YRVEGDLRREISMNIKRLVDIGSYRGV 59 Query: 91 RHRRGLPVRGQRTHTNARTRKKFGKG 116 RHRRGLPVRGQ T NARTRK + Sbjct: 60 RHRRGLPVRGQNTKNNARTRKGSKRS 85 >gi|50546092|ref|XP_500573.1| YALI0B06578p [Yarrowia lipolytica] gi|49646439|emb|CAG82804.1| YALI0B06578p [Yarrowia lipolytica] Length = 156 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 2 ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G +V L + G+G ++ +C K+ + P R+ +L + +++ I + + Sbjct: 3 VHIMGKRFQNTWKVSYGLSQQVFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +E DL + + +I+R G Y G RH G+PV+GQ+T TN + ++F + Sbjct: 63 STNVTIESDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQKTRTNGKNARRFNR 117 >gi|89257933|gb|ABD65245.1| ribosomal protein S18 [Stenella coeruleoalba] Length = 141 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 1 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 60 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 61 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 120 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 121 RGQHTKTTGRRGRTV---GVSKKK 141 >gi|219852960|ref|YP_002467392.1| 30S ribosomal protein S13P [Methanosphaerula palustris E1-9c] gi|219547219|gb|ACL17669.1| ribosomal protein S13 [Methanosphaerula palustris E1-9c] Length = 151 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R++ ++ K V AL I G+G +S I + A+ + +L + +V +IR + Sbjct: 11 FVRVSNTDLDGTKSVRVALTGIPGVGRHTSGIITRRAAVNEHELLGRLPDGDVDRIRDVV 70 Query: 61 ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + DL T ++ L + CYRG+RH G VR Sbjct: 71 TDYGALIPAWMRNRIKDVYTGESKHILGSDLAMTNDEDVNLLRKIRCYRGIRHETGQKVR 130 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + RT GV RK+ Sbjct: 131 GQRTKSTGRTGTTV---GVKRKK 150 >gi|290985905|ref|XP_002675665.1| ribosomal protein S13 [Naegleria gruberi] gi|284089263|gb|EFC42921.1| ribosomal protein S13 [Naegleria gruberi] Length = 156 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 R+ NI + + AL + GIG + + + K I +R +L E ++ +I+ I Sbjct: 16 RLFNTNIEGRRSALYALTSVKGIGRRFAGIVLKKAEIELTKRSGELSEEQINKIQDIILA 75 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 ++ V + + +++RL + RGLRH GL VRG Sbjct: 76 PEKYKIPSWFLNRRRDWKSGATEHLVANAVDMYLREDLERLKKIKSERGLRHMWGLRVRG 135 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T R K GV+ K+ Sbjct: 136 QHTKTTGRRGKTV---GVSHKK 154 >gi|326434114|gb|EGD79684.1| 40S ribosomal protein S18 [Salpingoeca sp. ATCC 50818] Length = 154 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ + ++ +L I G+G + S K I ++R QL +V +I + + Sbjct: 12 ILRVLNTNLAGEENIMYSLTAIRGVGRRYSNLCLKKAEINQKQRAGQLNNDDVDRIVKVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q V DL + + +R+ + +RG+RH G+ V Sbjct: 72 QNPLQYKIPKWFLNRQKDPKDGAYQHCVANDLNSKLRDDFERMKKMRLHRGIRHMWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GVA+K+ Sbjct: 132 RGQHTKTTGRRGKTV---GVAKKK 152 >gi|149264635|ref|XP_001473856.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 152 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGL H GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGQTV---GVSKKK 152 >gi|62083469|gb|AAX62459.1| ribosomal protein S18 [Lysiphlebus testaceipes] Length = 155 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ NI +++ AL I G+G + + + K I ++R + E E+ +I I Sbjct: 15 MLRVMSTNIDGNRKITLALTDIKGVGRRYADMVVKKADIALQKRAGECTEEEIEKIVTII 74 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +++RL + ++GLRH GL V Sbjct: 75 ANPRHYKIPDYYLNRQKDKVDGKYSQLTGSSVDSKLREDLERLKKIRAHKGLRHYWGLRV 134 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 135 RGQHTKTTGRRGRTV---GVSKKK 155 >gi|312137106|ref|YP_004004443.1| ssu ribosomal protein s13p [Methanothermus fervidus DSM 2088] gi|311224825|gb|ADP77681.1| SSU ribosomal protein S13P [Methanothermus fervidus DSM 2088] Length = 148 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 23/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A ++ K V A+ I GIG + I +++ L + E+ ++ AI Sbjct: 8 IVRLARRDLDGNKNVEEAITGIKGIGKALGKAIARVTGF-EGKKIGYLSDEELEKLEDAI 66 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + +E DL T+ +I RL + YRG+RH GLPV Sbjct: 67 ENPGNYGIPSWMFNRKKDYRTGENKHLIEADLEMTIREDINRLKRIRSYRGIRHELGLPV 126 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT + R + G Sbjct: 127 RGQRTKSTFRKGQTVG 142 >gi|225734652|gb|ACO25361.1| 40S ribosomal protein S18 [Gillichthys seta] gi|226442023|gb|ACO57601.1| 40S ribosomal protein S18 [Gillichthys mirabilis] Length = 142 Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 6 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 65 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 66 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125 Query: 99 RGQRTHTNARTRKKFG 114 RGQ T T R + G Sbjct: 126 RGQHTKTTGRRGRTVG 141 >gi|48478291|ref|YP_023997.1| 30S ribosomal protein S13P [Picrophilus torridus DSM 9790] gi|74567419|sp|Q6KZP8|RS13_PICTO RecName: Full=30S ribosomal protein S13P gi|48430939|gb|AAT43804.1| small subunit ribosomal protein S13P [Picrophilus torridus DSM 9790] Length = 158 Score = 109 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + S+ I KL + P++R+ +L E ++ ++R+ I Sbjct: 14 IVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYI 73 Query: 61 E---------------------QDY-QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E +D+ V DL + +I + + Y+G+RH RGL V Sbjct: 74 EGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARK 121 RGQR +N R K G V +K Sbjct: 134 RGQRMRSNGR--KGLAIGVVRKK 154 >gi|157876640|ref|XP_001686665.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin] gi|66476122|gb|AAY51369.1| ribosomal protein S18 [Leishmania major] gi|68129740|emb|CAJ09046.1| putative 40S ribosomal protein S18 [Leishmania major strain Friedlin] Length = 218 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 78 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 198 RGQHTCTSGRHGKTV---GVSRGK 218 >gi|118576779|ref|YP_876522.1| ribosomal protein S13 [Cenarchaeum symbiosum A] gi|158706221|sp|A0RY01|RS13_CENSY RecName: Full=30S ribosomal protein S13P gi|118195300|gb|ABK78218.1| ribosomal protein S13 [Cenarchaeum symbiosum A] Length = 227 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G ++P K+ V L I GIG+ + I + L I + L + +V I + + Sbjct: 54 IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + D+ TV +++R G ++G RH GL V Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173 Query: 99 RGQRTHTNAR 108 RGQRT R Sbjct: 174 RGQRTRNTGR 183 >gi|210075787|ref|XP_503080.2| YALI0D20614p [Yarrowia lipolytica] gi|199425832|emb|CAG81272.2| YALI0D20614p [Yarrowia lipolytica] Length = 152 Score = 109 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ A+C I G+G + + +C K + +R +L E+ +I I Sbjct: 14 ILRLLNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGELTVEELERIVTII 73 Query: 61 EQD--YQVEG--------------------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Y++ G L + +I+RL + +RGLRH G V Sbjct: 74 QNPGQYKIPGWFLNRQRDFTDGKDSQLLVNQLDVKLRDDIERLKKIRAHRGLRHYWGYKV 133 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ T T R K G Sbjct: 134 RGQHTKTTTRKGKIMAHRG 152 >gi|148643485|ref|YP_001273998.1| 30S ribosomal protein S13P [Methanobrevibacter smithii ATCC 35061] gi|222445016|ref|ZP_03607531.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii DSM 2375] gi|261350414|ref|ZP_05975831.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374] gi|158706442|sp|A5UN52|RS13_METS3 RecName: Full=30S ribosomal protein S13P gi|148552502|gb|ABQ87630.1| ribosomal protein S13p [Methanobrevibacter smithii ATCC 35061] gi|222434581|gb|EEE41746.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii DSM 2375] gi|288861197|gb|EFC93495.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374] Length = 147 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 22/135 (16%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI+ ++ K + +AL I G+G S +C L + E ++ + + +V++I + +E Sbjct: 9 VRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILE 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + +E DL T+ ++ R+ Y+G RH GLPVR Sbjct: 69 NPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPVR 128 Query: 100 GQRTHTNARTRKKFG 114 GQRT + R G Sbjct: 129 GQRTKSTFRNSSSVG 143 >gi|13187|emb|CAA38280.1| ribosomal protein S13 [Oenothera berteroana] Length = 114 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G ++V A + GIG K + + ++L + +L + ++ QI Q Sbjct: 1 MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRSRLG--GNIKRKELTKYQIDQIEQMR 58 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115 QD+ V +L+R +I+R + + CYRG+RH+ G P+RGQR+HTNART RK+ K Sbjct: 59 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRSHTNARTSRKRIRK 114 >gi|145357113|ref|XP_001422767.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] gi|144583010|gb|ABP01084.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S small subunit [Ostreococcus lucimarinus CCE9901] Length = 144 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 22/133 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V+ +L I GIG + S +C K I +R +L +E+ + + Sbjct: 12 IIRVLNTNVDGREKVMYSLTKIKGIGRRFSNLVCKKAEIDLGKRAGELSAAELESLMVIV 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q V L + +++RL + +RGLRH G+ V Sbjct: 72 SNPRQFRIPDWFLNRKHDFKDGKFSQLVSNQLDTKLRDDLERLKKMRNHRGLRHYWGIRV 131 Query: 99 RGQRTHTNARTRK 111 RGQ T T R R+ Sbjct: 132 RGQHTKTTGRGRR 144 >gi|110816065|ref|YP_684397.1| ribosomal protein S13 [Oltmannsiellopsis viridis] gi|86450276|gb|ABC96355.1| ribosomal protein S13 [Oltmannsiellopsis viridis] Length = 117 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I K + +L GIG K + +IC+KL + + L ++ + I Sbjct: 1 MKYILQTPCDDKKPLKASLQKFLGIGPKKAIEICDKLGVASSMNLSSLNAYQIHVL-TGI 59 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 Y + +RR NI+RL+ + YRG RH GLP RGQRT TNA T +KF Sbjct: 60 LNSYDIRHSVRRKKRENIQRLVRISSYRGFRHTAGLPCRGQRTKTNANTARKFK 113 >gi|1350947|sp|P49202|RS18_CHLRE RecName: Full=40S ribosomal protein S18 gi|624957|emb|CAA58668.1| ribosomal protein S18 [Chlamydomonas reinhardtii] gi|1587084|prf||2205351A ribosomal protein S18 Length = 153 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ A+ I GIG + S +C K + + + E+ ++ + Sbjct: 13 ILRLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIV 72 Query: 61 ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++D++ L + +++RL + +RGLRH GL V Sbjct: 73 ANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GVA+K+ Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153 >gi|213402553|ref|XP_002172049.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces japonicus yFS275] gi|212000096|gb|EEB05756.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces japonicus yFS275] Length = 142 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M + GV++P K V AL +GIG +++ IC +L+ ++ L E+++ ++ Q + Sbjct: 1 MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQIL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 +E DL+R V NI R + + Y+GLRH G Sbjct: 61 -NGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94 >gi|9695400|ref|NP_037622.1| ribosomal protein S13 [Phytophthora infestans] gi|6692652|gb|AAF24795.1|U17009_28 ribosomal protein S13 [Phytophthora infestans] gi|58012158|gb|AAW62566.1| ribosomal protein S13 [Phytophthora infestans] Length = 137 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINEFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 ++ +VE L++ + L+++ RG+R +GLPVRGQRTHTNA Sbjct: 61 NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107 >gi|1350948|sp|P48151|RS18_ENTHI RecName: Full=40S ribosomal protein S18 gi|509603|gb|AAD09140.1| ribosomal protein S18 [Entamoeba histolytica] Length = 155 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ ++V AL I G G + + +C + I +R + +E+ +I + Sbjct: 13 MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72 Query: 61 EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +I+ L + +RGLRH GL V Sbjct: 73 TTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV+R + Sbjct: 133 RGQNTKTTGRRGRTV---GVSRTK 153 >gi|16082067|ref|NP_394493.1| 30S ribosomal protein S13P [Thermoplasma acidophilum DSM 1728] gi|32363410|sp|Q9HJD6|RS13_THEAC RecName: Full=30S ribosomal protein S13P gi|10640348|emb|CAC12162.1| probable ribosomal protein S13 [Thermoplasma acidophilum] Length = 171 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 23/142 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + I +L +P ++++ +L E ++ ++R+ + Sbjct: 31 IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90 Query: 61 E-QDY--------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E ++Y V DL V +I + + Y+G+RH +G VR Sbjct: 91 EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 100 GQRTHTNARTRKKFGKGGVARK 121 GQRT +N R K G V +K Sbjct: 151 GQRTRSNGR--KGLSIGVVRKK 170 >gi|66818921|ref|XP_643120.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4] gi|74926730|sp|Q869U7|RS18_DICDI RecName: Full=40S ribosomal protein S18 gi|60471198|gb|EAL69161.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4] Length = 154 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 22/139 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +++ AL + G+G + + +C K I +R +L + EV ++ + Sbjct: 14 IIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIM 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + + +++RL + +RG+RH GL V Sbjct: 74 NHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGG 117 RGQ+T T R + G G Sbjct: 134 RGQKTKTTGRRGRTVGVAG 152 >gi|50409133|ref|XP_456841.1| DEHA2A11704p [Debaryomyces hansenii CBS767] gi|49652505|emb|CAG84816.1| DEHA2A11704p [Debaryomyces hansenii] Length = 121 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%) Query: 2 ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G +I V L I G+G+ +++ IC K+ I P+ R++QL E +++ I + + Sbjct: 3 VHIFGKSIKHNALVKIGLAKKIFGVGYNTAERICAKVGIYPKMRMNQLTEPQIMAINKEL 62 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 D +EG L++ + +IK +G G RH GLPVRGQRT N++T + + Sbjct: 63 S-DLTIEGHLKQKILDDIKLKRSIGSIAGSRHAAGLPVRGQRTRNNSQTANRLNR 116 >gi|15668361|ref|NP_247157.1| 30S ribosomal protein S13P [Methanocaldococcus jannaschii DSM 2661] gi|3334492|sp|P54019|RS13_METJA RecName: Full=30S ribosomal protein S13P gi|2826258|gb|AAB98169.1| SSU ribosomal protein S13P (rpsM) [Methanocaldococcus jannaschii DSM 2661] Length = 150 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49 R++ ++ K+++ AL I+G+G ++ I + P + L Sbjct: 11 RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLAD 70 Query: 50 ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 S + R+ E + +E DL +I RL + CYRG+RH GLP RG Sbjct: 71 PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV+R++ Sbjct: 131 QRTKSTFRRGPTV---GVSRRK 149 >gi|114588265|ref|XP_001147895.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes] gi|114588267|ref|XP_001147958.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes] gi|114588269|ref|XP_001148030.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes] gi|114588271|ref|XP_001148104.1| PREDICTED: similar to ribosomal protein isoform 4 [Pan troglodytes] gi|114588273|ref|XP_001148176.1| PREDICTED: similar to ribosomal protein isoform 5 [Pan troglodytes] Length = 152 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHLWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|13541393|ref|NP_111081.1| 30S ribosomal protein S13P [Thermoplasma volcanium GSS1] gi|32363380|sp|Q97B96|RS13_THEVO RecName: Full=30S ribosomal protein S13P gi|14324776|dbj|BAB59703.1| ribosomal protein small subunit S18 [Thermoplasma volcanium GSS1] Length = 171 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 23/142 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ + + AL + GIG + I +L + P +++ +L E E+ ++++ + Sbjct: 31 IVRIANKDLNGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYV 90 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E V DL V +I + + Y+G+RH +G VR Sbjct: 91 ENKEYDLPDWLLNHRREPVTGKNLNLVTTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVR 150 Query: 100 GQRTHTNARTRKKFGKGGVARK 121 GQRT +N R + G V +K Sbjct: 151 GQRTRSNGR--RGLSIGVVRKK 170 >gi|255087650|ref|XP_002505748.1| ribosomal protein S18 [Micromonas sp. RCC299] gi|226521018|gb|ACO67006.1| ribosomal protein S18 [Micromonas sp. RCC299] Length = 145 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 22/134 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I GIG + S +C K I +R +L +E+ + + Sbjct: 12 ILRVLNTNVDGRTKVMYALTQIRGIGRRFSNVVCKKAEIDMGKRAGELSAAELESLMVIV 71 Query: 61 EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 QV L ++ +++RL + +RGLRH G+ V Sbjct: 72 SNPRQFRIPDWFLNRQKNYKDGKYIQQVSNQLDTSLRDDLERLKKIRNHRGLRHYWGIRV 131 Query: 99 RGQRTHTNARTRKK 112 RGQ T T R K+ Sbjct: 132 RGQHTKTTGRRGKR 145 >gi|164660596|ref|XP_001731421.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966] gi|159105321|gb|EDP44207.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966] Length = 189 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 46/159 (28%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 + G +P K V AL +GI + +++ +C ++ + V L ES++ + + Sbjct: 2 YLLGTYLPDHKLVRIALTNFYGISYDTARRLCARIQVHERATVSSLTESQITDLSAYLSS 61 Query: 63 DYQV----------------------------------------------EGDLRRTVAM 76 + E DLRR V Sbjct: 62 PGMIPAASPTPTRASLHGSTPKPPMPENPAELPPSQRPKASMDPLRSIVLESDLRREVLA 121 Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NI +G Y G RH G PVRGQRT NA T ++ + Sbjct: 122 NIAHHRSIGSYVGKRHAGGFPVRGQRTQRNALTARRLNR 160 >gi|37779106|gb|AAP20213.1| 40S ribosomal protein S18 [Pagrus major] Length = 140 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 25/140 (17%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 NI +++ A+ I G+G + + + K I +R +L + EV ++ ++ Sbjct: 4 LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPR 63 Query: 65 Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 Q + L + +++RL + +RGLRH GL VRGQ Sbjct: 64 QYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 123 Query: 103 THTNARTRKKFGKGGVARKR 122 T T R + GV++K+ Sbjct: 124 TKTTGRRGRTV---GVSKKK 140 >gi|167042556|gb|ABZ07280.1| putative ribosomal protein S13/S18 [uncultured marine microorganism HF4000_ANIW133F6] Length = 155 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A +I + + + L I G+G +++ +C+ I + L + E +IR I Sbjct: 16 ILRLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTI 75 Query: 61 EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 ++ + + +++ T+ +I RL + YRG+RHR G VR Sbjct: 76 DEYALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVR 135 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQR +N R+ GV +K+ Sbjct: 136 GQRLRSNGRSGATL---GVQKKK 155 >gi|315425850|dbj|BAJ47503.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum subterraneum] gi|315427708|dbj|BAJ49304.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum subterraneum] Length = 161 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 25/143 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ R+ AL + GIG I I P R+ L E ++ +I Q Sbjct: 8 IVRVLNTDVDGTLRLPYALARVKGIGVNLGYAIARAAGIDPATRLGNLTEKQIEKIEQIA 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + DL + +I+ +M ++G+RH GL V Sbjct: 68 RNPTRFGIPAWLLNRRFDPVTGEDRHLTGADLELAIKEDIQTMMRTKSWKGIRHSLGLKV 127 Query: 99 RGQRTHTNARTRKKFGKGGVARK 121 RGQRT T R GV+RK Sbjct: 128 RGQRTRTTGRKGMTV---GVSRK 147 >gi|86279745|gb|ABC94527.1| 30S ribosomal protein S13 [Cryptomonas tetrapyrenoidosa] Length = 81 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 39/81 (48%), Positives = 55/81 (67%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAGV++PR KR+ L YI+GIG SSQ+I K + + R L + ++ IR+ I Sbjct: 1 MARIAGVDLPRNKRIEIGLTYIYGIGLSSSQNILTKAQVNSDIRCKDLTDQDISIIREII 60 Query: 61 EQDYQVEGDLRRTVAMNIKRL 81 +++YQVEG RR ++NIKRL Sbjct: 61 DKEYQVEGAARRVESLNIKRL 81 >gi|116206296|ref|XP_001228957.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51] gi|88183038|gb|EAQ90506.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51] Length = 115 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V + +G +++ I K +I P ++ L + + + Sbjct: 1 MVFIFGVNFNEQKLVK----SFYALGPQTADRILAKYSIYPGAKMGTLPPKTLTALTAEL 56 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E D RR + NIKRL D+G YRG RH GLPVRGQRT T +K K Sbjct: 57 ST-MNIESDARRVLQDNIKRLRDMGTYRGRRHAMGLPVRGQRTRNQIETARKLNK 110 >gi|327239254|gb|AEA39494.1| ribosomal protein S18 [Ailuropoda melanoleuca] gi|327239350|gb|AEA39542.1| ribosomal protein S18 [Ailuropoda melanoleuca] Length = 152 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLGE 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|70992765|ref|XP_751231.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293] gi|66848864|gb|EAL89193.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293] gi|159130314|gb|EDP55427.1| ribosomal protein S13p/S18e [Aspergillus fumigatus A1163] Length = 127 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 25/129 (19%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65 + AL I G+G + S +C K + +R +L E+ +I ++ Q Sbjct: 1 MYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPTQYKIPTWFLNR 60 Query: 66 ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + L + +++RL + +RGLRH GL VRGQ T T R + Sbjct: 61 QRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTV 120 Query: 114 GKGGVARKR 122 GV++K+ Sbjct: 121 ---GVSKKK 126 >gi|58201997|gb|AAW67052.1| ribosomal protein S13 [Phytophthora infestans] gi|58202044|gb|AAW67098.1| ribosomal protein S13 [Phytophthora infestans] Length = 137 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I I +K ++ +L ++GI S+ IC + I P+ +++L + V ++ I Sbjct: 1 MLYIFNKTISDSKSILYSLTVLYGINGFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 ++ +VE L++ + L+++ RG+R +GLPVRGQRTHTNA Sbjct: 61 NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107 >gi|161527833|ref|YP_001581659.1| 30S ribosomal protein S13P [Nitrosopumilus maritimus SCM1] gi|160339134|gb|ABX12221.1| ribosomal protein S13 [Nitrosopumilus maritimus SCM1] Length = 194 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP ++++ L I GIG+ + I + L I + L + V I + I Sbjct: 12 IVRIVGNDIPGERKMLVGLTQIKGIGYNFATAILDTLNIDSNSNIGHLTDENVQAIEKLI 71 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + D+ T+ +I+R +RG RH GL V Sbjct: 72 TNPAEGNFPTWFLNRRKDIETGNDLHLLTSDIPFTLRNDIERERVTASWRGYRHLSGLKV 131 Query: 99 RGQRTHTNAR 108 RGQRT T+ R Sbjct: 132 RGQRTRTSGR 141 >gi|240281197|gb|EER44700.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H143] Length = 101 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 1/102 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I G+N P + V +AL GIG + + + + ++ L +V+ + A+ Sbjct: 1 MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 + ++E DLRR + +I+RL D G RG RH GLPVRGQ Sbjct: 61 SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQN 101 >gi|330845753|ref|XP_003294736.1| 40S ribosomal protein S18 [Dictyostelium purpureum] gi|325074743|gb|EGC28736.1| 40S ribosomal protein S18 [Dictyostelium purpureum] Length = 154 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ ++V+ AL + G+G + + +C K + +R +L + EV ++ + Sbjct: 12 IIRIYNTNVDGRRKVMYALMCVKGVGKRFADLVCKKADVDTSKRAGELSKDEVERLTTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + + +++RL + +RG+RH GL V Sbjct: 72 NHPRQYNIPTWFLNRQKDIKDGKYSQCLANQIDVKFREDLERLKKIRAHRGIRHHFGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ+T T R + GVA+KR Sbjct: 132 RGQKTKTTGRRGRTV---GVAKKR 152 >gi|114606877|ref|XP_001170149.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes] Length = 143 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE-------- 52 + R+ NI +++ A+ I G+G + + + K I +R +L E E Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDENPRQYKIP 71 Query: 53 ---VIQIRQAIEQDY--QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + + + + Y + L + +++RL + +RGLRH GL VRGQ T T Sbjct: 72 DWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG 131 Query: 108 RTRKKFGKGGVARKR 122 R + GV++K+ Sbjct: 132 RRGRTV---GVSKKK 143 >gi|49147226|ref|YP_025819.1| ribosomal protein S13 [Pseudendoclonium akinetum] gi|33439241|gb|AAQ18778.1| ribosomal protein S13 [Pseudendoclonium akinetum] Length = 119 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + G N+ K AL I+G+G KS+ +CN + I P+ R+ +L +++ + ++ + Sbjct: 3 LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRR- 61 Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + +R IK L+ + CYRG RH LP RGQRT TNA T K Sbjct: 62 -LIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNL 110 >gi|256084884|ref|XP_002578655.1| 40S ribosomal protein S18 [Schistosoma mansoni] gi|238664036|emb|CAZ34893.1| 40S ribosomal protein S18, putative [Schistosoma mansoni] Length = 152 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 22/124 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + +C K I +R +L E EV ++ + Sbjct: 12 ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTEDEVEKLVTVM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + G L + +++RL + +RG+RH GL V Sbjct: 72 SNPRQYKIPDWFLNRQKDVDDGKHSQLMSGALETKLREDLERLKRIRSHRGIRHYWGLRV 131 Query: 99 RGQR 102 RGQ Sbjct: 132 RGQH 135 >gi|297670462|ref|XP_002813387.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] Length = 152 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I +R +L EV ++ + Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G V Sbjct: 72 QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT T R + GV++K+ Sbjct: 132 RGQRTKTTGRRGRTV---GVSKKK 152 >gi|329765794|ref|ZP_08257360.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137637|gb|EGG41907.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1] Length = 192 Score = 106 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI G +IP A++ + L I GIG+ + I + L I + L ES+V I + I Sbjct: 9 IVRIVGNDIPGARKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLI 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + D+ T+ +I+R +RG RH GL V Sbjct: 69 TNPIAGNFPPWFLNRRKDIETGSNMHLLTSDIPFTLRNDIERERITNSWRGYRHMYGLKV 128 Query: 99 RGQRTHTNARTRKKFGKGGVAR 120 RGQ T T R K G GVA+ Sbjct: 129 RGQCTRTTGR---KGGAVGVAK 147 >gi|223994887|ref|XP_002287127.1| RS18, ribosomal protein 18 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335] gi|220976243|gb|EED94570.1| RS18, ribosomal protein 18 40S small ribosomal subunit [Thalassiosira pseudonana CCMP1335] Length = 146 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ + VV L I G+G + + IC K I +R +L E+ ++ I Sbjct: 14 ILRILNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAII 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + + +I+R+ + +RGLRH G+ V Sbjct: 74 QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNFDAKLRDDIERMKKIRAHRGLRHWWGIRV 133 Query: 99 RGQRTHTNAR 108 RGQ T + R Sbjct: 134 RGQHTCSTGR 143 >gi|116754907|ref|YP_844025.1| 30S ribosomal protein S13P [Methanosaeta thermophila PT] gi|121694236|sp|A0B9L1|RS13_METTP RecName: Full=30S ribosomal protein S13P gi|116666358|gb|ABK15385.1| SSU ribosomal protein S13P [Methanosaeta thermophila PT] Length = 159 Score = 106 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ K+V AL I G+G + ++ K + P + +L E ++ ++ I Sbjct: 15 IVRIYNTDLDGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVI 74 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 E + + ++ T+ ++ + Y+G+RH GL VR Sbjct: 75 ESVRDNIPAWMMNRRKDIITGVDKHVMGAEVLTTLREDLDIMKKTRSYKGIRHELGLRVR 134 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT + R+ GV RK+ Sbjct: 135 GQRTRSTGRSGATV---GVTRKK 154 >gi|195610746|gb|ACG27203.1| 40S ribosomal protein S18 [Zea mays] Length = 126 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 25/129 (19%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65 + A+ I G+G + S +C K I +R +L E+ ++ + Q Sbjct: 1 MFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPRQFKVPDWFLNR 60 Query: 66 ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 V L + +++RL + +RGLRH GL VRGQ T T R K Sbjct: 61 KKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 120 Query: 114 GKGGVARKR 122 GV++KR Sbjct: 121 ---GVSKKR 126 >gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea] Length = 152 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I GIG + + + K I +R +L E EV Q+ + Sbjct: 12 ILRVFNTNIDGNICILHAMTAIKGIGRRYAHAVLRKADIDIRKRAGELAEEEVQQVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 Q + L + +++R+ + +RGLRH GL Sbjct: 72 SNPRQYKIPDWYLNRQRDIKDGKTSQVIANGLDNKMREDMERMKKIRLHRGLRHYWGLRT 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|289191583|ref|YP_003457524.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22] gi|288938033|gb|ADC68788.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22] Length = 150 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49 R++ ++ K+++ AL I+G+G ++ + + P + L Sbjct: 11 RVSRTDLDGNKKLIMALQDIYGVGEAMARAVIRVTKLDPNKLAGYLTEEEVKKIEEVLAD 70 Query: 50 ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 S + R+ E + +E DL +I RL + CYRG+RH GLP RG Sbjct: 71 PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R + GV+R++ Sbjct: 131 QRTRSTFRRGQTV---GVSRRK 149 >gi|297712488|ref|XP_002832792.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii] Length = 152 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I +R +L EV ++ + Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH G V Sbjct: 72 QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|283795035|ref|YP_003359452.1| ribosomal protein S13 [Synedra acus] gi|261279691|gb|ACX61999.1| ribosomal protein S13 [Synedra acus] Length = 117 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I + K + L I+GIG K S IC KL + Q+ ++ + + + + Sbjct: 2 YILDTKLKDNKIMTIGLTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNK 61 Query: 63 DYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +Y+ V +L++ + +++L+ + RGLR +GLPVRGQRTHTNA+T KK Sbjct: 62 EYKLKVSNELKKIESFRLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKK 113 >gi|219128444|ref|XP_002184423.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404224|gb|EEC44172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 146 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ + VV L I GIG + S IC K + ++R +L E+ ++ I Sbjct: 14 ILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVI 73 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q ++ + +I+RL + +RGLRH + V Sbjct: 74 QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIRAHRGLRHWWNIRV 133 Query: 99 RGQRTHTNARTR 110 RGQ T + R R Sbjct: 134 RGQHTCSTGRRR 145 >gi|296243122|ref|YP_003650609.1| 30S ribosomal protein S13P [Thermosphaera aggregans DSM 11486] gi|296095706|gb|ADG91657.1| SSU ribosomal protein S13P [Thermosphaera aggregans DSM 11486] Length = 162 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ +I + ++ L + G+G+ S I L + P R+ L + +V +I + Sbjct: 10 IIRVLETDIDGSLPLIYGLAEVKGLGYTFSLAITRILGLDPNTRIGYLSDEDVRKIEALV 69 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + V +L V +I+R + +RG+RH GL V Sbjct: 70 KNPSSYGLPSWMFNRRKDYASGKDLHLVGAELIYYVKEDIEREKRVRSWRGVRHALGLKV 129 Query: 99 RGQRTHTNARTRKKFG 114 RGQRT T R G Sbjct: 130 RGQRTRTTGRLGVTVG 145 >gi|303244311|ref|ZP_07330648.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1] gi|302485438|gb|EFL48365.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1] Length = 168 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60 RI+ +I + AL I GIG ++ I + +++ L + +V +I + + Sbjct: 30 RISKTDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGYLSDEDVQKIEEVLND 89 Query: 61 --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 E + +E DL TV +I + + CYRG+RH GLP RG Sbjct: 90 PAKHGIPSWMFNRKKDTYTGEDKHLIETDLMLTVQEDITTMKKIRCYRGIRHELGLPCRG 149 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + ++ GV R++ Sbjct: 150 QRTR---GSFRRGSIVGVKRRK 168 >gi|71747446|ref|XP_822778.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927] gi|71747448|ref|XP_822779.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927] gi|70832446|gb|EAN77950.1| 40S ribosomal protein S18, putative [Trypanosoma brucei] gi|70832447|gb|EAN77951.1| 40S ribosomal protein S18, putative [Trypanosoma brucei] gi|261332570|emb|CBH15565.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense DAL972] gi|261332571|emb|CBH15566.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense DAL972] Length = 153 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + GIG + + +C K + ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSPEELEKISEVI 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPEWFLNRQRDPKTGKTEHLTSSMVDTRLREDLERLRKIRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 133 RGQHTCTSGRRGKTV---GVSRTK 153 >gi|212531371|ref|XP_002145842.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] gi|210071206|gb|EEA25295.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224] Length = 127 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 25/129 (19%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65 + AL I G+G + S +C K + +R + E+ +I I+ Q Sbjct: 1 MYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPTQYKIPAWFLNR 60 Query: 66 ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + + +++RL + +RGLRH GL VRGQ T T R + Sbjct: 61 QRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTV 120 Query: 114 GKGGVARKR 122 GV++K+ Sbjct: 121 ---GVSKKK 126 >gi|82952669|ref|XP_893065.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|94395028|ref|XP_001001941.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 186 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 25/141 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI +++ A+ I G+G + + + K I +R +L E EV ++ ++ Sbjct: 49 VLNTNINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNP 108 Query: 64 --------------YQVEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101 Y +G L + +++RL + +R L H GL VRGQ Sbjct: 109 RQYSIPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQ 168 Query: 102 RTHTNARTRKKFGKGGVARKR 122 T T R + G+++K+ Sbjct: 169 HTKTTGRRGRTM---GISKKK 186 >gi|119501002|ref|XP_001267258.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181] gi|119415423|gb|EAW25361.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181] Length = 118 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 +L G+G S + + I P +V +L +V+ + A+ D ++E DLRR + + Sbjct: 17 SLETFFGVGPLVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIENDLRRQILDD 75 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 IKRL + G YRG RH GLPVRGQRT T T K + Sbjct: 76 IKRLKESGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 113 >gi|297737051|emb|CBI26252.3| unnamed protein product [Vitis vinifera] Length = 126 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 25/129 (19%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65 + AL I GIG + + +C K + +R +L +E+ + + Q Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNR 60 Query: 66 ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 V L + +++RL + +RGLRH GL VRGQ T T R K Sbjct: 61 KKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 120 Query: 114 GKGGVARKR 122 GV++KR Sbjct: 121 ---GVSKKR 126 >gi|263173239|gb|ACY69887.1| S18e ribosomal protein [Cimex lectularius] Length = 131 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 25/134 (18%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----- 65 ++V+ A+ I G+G + + + K + ++R + E EV +I ++ Q Sbjct: 1 GKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKILTIMQNPRQYKIPD 60 Query: 66 ---------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 VEG L + +++RL + +RG+RH GL VRGQ T T R Sbjct: 61 WFLNRQKDIVEGKYFQLTSASLDAKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 120 Query: 109 TRKKFGKGGVARKR 122 + GV++K+ Sbjct: 121 RGRTV---GVSKKK 131 >gi|146103218|ref|XP_001469510.1| 40S ribosomal protein S18 [Leishmania infantum] gi|134073880|emb|CAM72619.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5] gi|322503453|emb|CBZ38538.1| unnamed protein product [Leishmania donovani BPK282A1] gi|322503454|emb|CBZ38539.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 166 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 26 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 85 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 86 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 145 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV+R + Sbjct: 146 RGQHTCTTGRHGKTV---GVSRGK 166 >gi|148679456|gb|EDL11403.1| mCG9349 [Mus musculus] Length = 143 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 22/132 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L + EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTQDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 Query: 99 RGQRTHTNARTR 110 RGQ T T R Sbjct: 132 RGQHTKTTGRRG 143 >gi|296214070|ref|XP_002753551.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus] Length = 152 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++R + ++GLRH L V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDLERQKKIWAHKGLRHFWDLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R GV++K+ Sbjct: 132 RGQHTKTTGRRGCTV---GVSKKK 152 >gi|303289004|ref|XP_003063790.1| ribosomal protein S18 [Micromonas pusilla CCMP1545] gi|226454858|gb|EEH52163.1| ribosomal protein S18 [Micromonas pusilla CCMP1545] Length = 144 Score = 104 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +V+ AL I GIG + + +C K I +R +L +E+ + + Sbjct: 13 ILRVLNTNVDGRTKVMYALTQIRGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIV 72 Query: 61 ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY+ L + +++RL + +RGLRH G+ V Sbjct: 73 ANPRQFRIPDWFLNRQKDYKDGKYVQLTSNALDTKLRDDLERLKKIRNHRGLRHYWGIRV 132 Query: 99 RGQRTHTNAR 108 RGQ T T R Sbjct: 133 RGQHTKTTGR 142 >gi|213612286|ref|ZP_03370112.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 79 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRRTVAMNIKR 80 + + VEGDLRR ++M+IKR Sbjct: 61 AK-FVVEGDLRREISMSIKR 79 >gi|39961431|ref|XP_364684.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15] gi|145011032|gb|EDJ95688.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15] Length = 119 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL +G + S I K I P ++ L + + + Sbjct: 1 MVLILGVNFHEQKLVRKALESFWNLGPQKSARILAKYCIHPMAKLGTLPPKTITALTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E + ++ V NI+RL D+G YRG RH LPVRGQ+T T +K + Sbjct: 61 ST-MNIENEAKKVVLDNIRRLRDMGTYRGRRHAMHLPVRGQQTKNQTETARKLNQ 114 >gi|313126020|ref|YP_004036290.1| SSU ribosomal protein s13p [Halogeometricum borinquense DSM 11551] gi|312292385|gb|ADQ66845.1| SSU ribosomal protein S13P [Halogeometricum borinquense DSM 11551] Length = 172 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 21/135 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV----------- 49 RI ++ K V R+L + GIG ++++ + + + L Sbjct: 20 FVRIGQTDLDGTKTVERSLSDMKGIGKRTARIVADAAGVDRTETFGLLDQDDIDAVVDVV 79 Query: 50 -------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 +I R E ++ DL + +I R+ + Y+G+RH+RG VR Sbjct: 80 ENFNDHAPEWMINRRDDFYTGETTHKTGSDLEQKRRHDINRMKMINSYKGVRHKRGQKVR 139 Query: 100 GQRTHTNARTRKKFG 114 GQRT + RT G Sbjct: 140 GQRTKSTGRTEGTIG 154 >gi|167527167|ref|XP_001747916.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773665|gb|EDQ87303.1| predicted protein [Monosiga brevicollis MX1] Length = 154 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI + ++ A+ I G+G + S K I RR +L E +V ++ + Sbjct: 12 ILRVMNTNIAGDRNIMYAMTAIKGVGRRYSNLCLKKAEISTRRRAGELTEDDVRRVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + DL + +++R+ + +RG+RH G+ V Sbjct: 72 QNPRQYKIPDWFLNRKKDIKDGTYSQLLASDLNVKLRDDLERMKKIRLHRGIRHYWGVRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152 >gi|1071882|dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris] Length = 90 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 52/90 (57%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M+ I+G + K+V A I GIG K + +C +L I ++ +L + ++ QI Q I Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90 QD+ V +L+R +I+RL+ + CYRG+ Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGI 90 >gi|303389678|ref|XP_003073071.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC 50506] gi|303302215|gb|ADM11711.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC 50506] Length = 153 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI KR+ AL I G+G + S IC +L I +RR ++ E E+ +I AI Sbjct: 13 IVRIHNTNIDGTKRIAFALTKIRGVGIRISTAICKRLGIDLKRRAGEMSEEEMKRISDAI 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + M I+R R R GL V Sbjct: 73 LDPASLGIPESYLNHQKDPVDGTTSHLIGTKLDADLRMMIERGKKNKRIRACRLDVGLKV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R K GV+RK+ Sbjct: 133 RGQRTKSNGRRGKSM---GVSRKK 153 >gi|302023187|ref|ZP_07248398.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68] Length = 100 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Query: 45 VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 + L + IR+ ++ +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T Sbjct: 1 MKDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTK 59 Query: 105 TNARTRKKFGKGGVARKR 122 NARTRK +K+ Sbjct: 60 NNARTRKGEAVAIAGKKK 77 >gi|56754053|gb|AAW25217.1| unknown [Schistosoma japonicum] Length = 149 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 25/139 (17%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 NI +++ A+ I G+G + + + K I +R +L + EV ++ + Q Sbjct: 14 NTNIGGQLKIMYAITSIRGVGSRYANVVGKKADIALTKRAGELTDDEVEKLVPVMSNPSQ 73 Query: 66 ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103 + L + +++RL + +RG+RH GL VRGQ T Sbjct: 74 YKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRVRGQHT 133 Query: 104 HTNARTRKKFGKGGVARKR 122 T R + GV+RK+ Sbjct: 134 KTTGRRGRTV---GVSRKK 149 >gi|134058479|emb|CAL00688.1| unnamed protein product [Aspergillus niger] Length = 104 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 +++L GIG +S + + I P +V L +V+ I A+ D ++E DLRR Sbjct: 1 MKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAALS-DMKIENDLRRQYL 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIKRL + G YRG RH GLPVRGQRT + +T K + Sbjct: 60 DNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 99 >gi|149235401|ref|XP_001523579.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|149248956|ref|XP_001528820.1| hypothetical protein LELG_05785 [Lodderomyces elongisporus NRRL YB-4239] gi|146452988|gb|EDK47244.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146453348|gb|EDK47604.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 122 Score = 103 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 3/117 (2%) Query: 1 MAR-IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 M R I G I V L I GIG K + + ++ I P +V+QL E +++++ + Sbjct: 1 MGRVIFGKFIKGDFTVQIGLAKTIFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNK 60 Query: 59 AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 I Q VEG L++ + +I+ + G+RH +G PVRGQ+T TN T ++ K Sbjct: 61 EISQ-LTVEGHLKQKINSDIQMKRAINSRAGIRHAQGFPVRGQKTKTNGATARRLNK 116 >gi|321255209|ref|XP_003193346.1| 30s ribosomal protein s13 [Cryptococcus gattii WM276] gi|317459816|gb|ADV21559.1| 30s ribosomal protein s13, putative [Cryptococcus gattii WM276] Length = 194 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 59/160 (36%), Gaps = 47/160 (29%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 + G N+P K + AL +GI S + +L I E V QL E ++ + + Sbjct: 2 HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQLTALSAYLSS 61 Query: 62 ----------------------------------------------QDYQVEGDLRRTVA 75 D ++E + RR + Sbjct: 62 PSTTARPSEQQLELAPPGGKVLKPVGHPAIFGGLNKGKGKGQEDPLDDLKIETEKRRAMQ 121 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +I L +G YRG RH G PV GQRT TNA+T KK + Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKTAKKHNR 161 >gi|150402489|ref|YP_001329783.1| 30S ribosomal protein S13P [Methanococcus maripaludis C7] gi|159905737|ref|YP_001549399.1| 30S ribosomal protein S13P [Methanococcus maripaludis C6] gi|150033519|gb|ABR65632.1| ribosomal protein S13 [Methanococcus maripaludis C7] gi|159887230|gb|ABX02167.1| ribosomal protein S13 [Methanococcus maripaludis C6] Length = 149 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CYRG+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYRGVRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + +K GV RK+ Sbjct: 131 QRTR---GSFRKGTSMGVKRKK 149 >gi|146103213|ref|XP_001469509.1| 40S ribosomal protein S18 [Leishmania infantum] gi|134073879|emb|CAM72618.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5] Length = 153 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R K GV+R + Sbjct: 133 RGQHTCTTGRHGKTV---GVSRGK 153 >gi|150399381|ref|YP_001323148.1| 30S ribosomal protein S13P [Methanococcus vannielii SB] gi|150012084|gb|ABR54536.1| ribosomal protein S13 [Methanococcus vannielii SB] Length = 149 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEVKGIGRAMAKALIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL V +I + + CYRG+RH LP RG Sbjct: 71 PAKHGIPSWMFNRKKDVYTGLDKHLIETDLVLAVQEDIGNMKKIRCYRGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + R GV RK+ Sbjct: 131 QRTRGSFRKGSTM---GVKRKK 149 >gi|27658598|ref|XP_226269.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ +++ A+ I G+G++ + + K I +R +L E EV ++ ++ Sbjct: 14 RVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQN 73 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + +++R+ + +RGLRH GL VRG Sbjct: 74 PRQYKIPDWFLNRQKDMKDGKYSQVLANSLDNKLREDLERVKKIRAHRGLRHFWGLRVRG 133 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 + T T R + GV++K+ Sbjct: 134 RHTKTTGRRGRTV---GVSKKK 152 >gi|299753190|ref|XP_001833116.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130] gi|298410185|gb|EAU88805.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130] Length = 185 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 66/181 (36%) Query: 1 MARIAGVNIPRAKRVV---RALCYIHGIGFKSSQDICNKLAIP----------------- 40 M I GV++P AL +G+G K++ +C + I Sbjct: 1 MVHILGVHLPDNYLARNEQYALTKFYGVGQKTAHRLCARFQIHDKCKVKDLSPFQVTSLA 60 Query: 41 --------------------------PERRVHQL----VESE-------VIQIRQAIE-- 61 P V +L E++ + +I Q ++ Sbjct: 61 SFLSSPATAPPLPRYPLASPDYVPPPPNTPVSELQAKFKEAQALIEAKKLAKIEQGVKLG 120 Query: 62 -------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 + ++E +LRR + NI+ +G Y G RH LPVRGQ T +NA T KK Sbjct: 121 PGYVDPLKKLKIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLN 180 Query: 115 K 115 + Sbjct: 181 R 181 >gi|45358882|ref|NP_988439.1| 30S ribosomal protein S13P [Methanococcus maripaludis S2] gi|74553909|sp|Q6LXN1|RS13_METMP RecName: Full=30S ribosomal protein S13P gi|45047748|emb|CAF30875.1| SSU ribosomal protein S13 [Methanococcus maripaludis S2] Length = 149 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CY+G+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + +K GV RK+ Sbjct: 131 QRTR---GSFRKGTSMGVKRKK 149 >gi|109083515|ref|XP_001098938.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca mulatta] Length = 152 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDRFLNRQKDVKDGKYSQALANGLDNNLRKDLERLKKIQAHRGLRHFWGLCV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 +GQ T T R + GV+ K+ Sbjct: 132 QGQHTKTTGRRGRTM---GVSEKK 152 >gi|305662631|ref|YP_003858919.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230] gi|304377200|gb|ADM27039.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230] Length = 156 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+A +I + L + GIG+ + IC L + P + + + E+ +I + + Sbjct: 8 IVRVAETDIAGELSLSWGLSRVKGIGYNMAIAICRILGLDPSMPIGFITDQEIEKIEELL 67 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + V +L +I R + + +RG+RH G V Sbjct: 68 KNPQKYGIPVWFLNRRKDYETGNDMHLVSSELIYYARQDIDREIRIRSWRGIRHAMGYKV 127 Query: 99 RGQRTHTNAR 108 RGQRTHT R Sbjct: 128 RGQRTHTTGR 137 >gi|326472680|gb|EGD96689.1| 40S ribosomal protein S13 [Trichophyton tonsurans CBS 112818] Length = 124 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G + P + V +AL GIG + + I P V +L +V+ + A+ + + Sbjct: 11 GTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGALS-NMK 69 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +E DL+R + NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 70 IENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 119 >gi|260942527|ref|XP_002615562.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720] gi|238850852|gb|EEQ40316.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720] Length = 117 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD------------ 63 + AL I G+G + S +C K + +R +L + E+ ++ ++ Sbjct: 1 MYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPTQYKIPAWFLNR 60 Query: 64 ----------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110 + + +L + +++RL + +RG+RH GL VRGQ T T +R R Sbjct: 61 QKDHVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQHTKTTSRGR 117 >gi|268324996|emb|CBH38584.1| 30S ribosomal protein S13P [uncultured archaeon] Length = 167 Score = 101 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI ++ + V +LC ++GIG + ++ + I + ++ L + EV +++ AI Sbjct: 15 FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74 Query: 61 E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + + DL +I L + YRG+RH RGL VR Sbjct: 75 NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134 Query: 100 GQRTHTNARTRKKFGKGGVARKR 122 GQRT R GV RK+ Sbjct: 135 GQRTKATGRRGMVV---GVIRKK 154 >gi|19074361|ref|NP_585867.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1] gi|51702028|sp|Q8SRP2|RS18_ENCCU RecName: Full=40S ribosomal protein S18 gi|19069003|emb|CAD25471.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1] Length = 153 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI KR+ AL I GIG + + IC +L I +R ++ E E+ +I AI Sbjct: 13 IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + L + M I+R R R GL V Sbjct: 73 LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R + GV+RK+ Sbjct: 133 RGQRTKSNGRRGRSM---GVSRKK 153 >gi|119719177|ref|YP_919672.1| 30S ribosomal protein S13P [Thermofilum pendens Hrk 5] gi|158706292|sp|A1RWT9|RS13_THEPD RecName: Full=30S ribosomal protein S13P gi|119524297|gb|ABL77669.1| SSU ribosomal protein S13P [Thermofilum pendens Hrk 5] Length = 157 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 22/120 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+AGV++P K +V AL I GIG ++Q + KL + P R + L E EV ++ A+ Sbjct: 8 IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67 Query: 61 EQ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + DL TV +I+ + + Y+G+RH GL V Sbjct: 68 REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127 >gi|257076680|ref|ZP_05571041.1| 30S ribosomal protein S13P [Ferroplasma acidarmanus fer1] Length = 159 Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA +I +R+ L I+G+G + + + KL + R++ L E EV++IR+ + Sbjct: 14 IVRIANKDIRGERRMDLGLADINGVGERLANILIKKLNLDRNRQIGDLSEDEVLEIRKYV 73 Query: 61 E----------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 E + DL + +I + + YRGLRH +G V Sbjct: 74 ESKEYEGMPVWLLNHRKDVATGKNFNLLSNDLILKINDDINLMKKMRSYRGLRHEQGHKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV RKR Sbjct: 134 RGQRTRSNGRHGLSM---GVIRKR 154 >gi|302908932|ref|XP_003049961.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256730898|gb|EEU44248.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 119 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 1/100 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M I GVN K V +AL + +G +S I K +I +V L V + + Sbjct: 1 MVFILGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSLTAEL 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q +E D RR V NI+RL D+G YRG RH GLPVRG Sbjct: 61 SQ-MTIETDARRQVQENIRRLKDMGSYRGRRHAMGLPVRG 99 >gi|255950082|ref|XP_002565808.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592825|emb|CAP99193.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255] Length = 114 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 GIG SS + ++ I P RV +L +V+ + + + ++E DLRR V +IKR+ Sbjct: 12 FFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDLTAVLSE-MKIENDLRREVLNDIKRM 70 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHT 105 + G YRG RH GLPVRGQRT T Sbjct: 71 KETGTYRGRRHALGLPVRGQRTRT 94 >gi|297618742|ref|YP_003706847.1| ribosomal protein S13P [Methanococcus voltae A3] gi|297377719|gb|ADI35874.1| ribosomal protein S13P [Methanococcus voltae A3] Length = 149 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL I GIG ++ I + P+ + + + EV +I +E Sbjct: 11 RISKTDLKGESPLEYALQEIKGIGRAMARAIIRLTELDPKVQAGYIGDEEVAKIESVLED 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + L CYRG+RH LP RG Sbjct: 71 PAKHGIPSWMFNRKKDVYSGLDKHLIETDLTMTVQEDITTMKKLRCYRGIRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + +K GV R++ Sbjct: 131 QRTR---GSFRKGSSMGVKRRK 149 >gi|149940233|emb|CAM32184.1| ribosomal protein S18 [Sparus aurata] Length = 132 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 25/135 (18%) Query: 10 PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---- 65 +++ A+ I G+G + + + K I +R +L + EV + ++ Q Sbjct: 1 DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERAVTIMQNPRQYKIP 60 Query: 66 ------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + L + +++RL + +RGLRH GL VRGQ T T Sbjct: 61 DWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG 120 Query: 108 RTRKKFGKGGVARKR 122 R + GV++K+ Sbjct: 121 RRGRTV---GVSKKK 132 >gi|150401524|ref|YP_001325290.1| 30S ribosomal protein S13P [Methanococcus aeolicus Nankai-3] gi|150014227|gb|ABR56678.1| ribosomal protein S13 [Methanococcus aeolicus Nankai-3] Length = 149 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R++ +I + AL I GIG ++ I + +++ + + +V +I + + Sbjct: 11 RVSRTDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGLMSDEDVKKIEDILNE 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL V +I + + CYRG+RH GLP RG Sbjct: 71 PAKHGIPSWMFNRKNDVYSGLNKHLIESDLTMAVQEDIATMKKIRCYRGIRHELGLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + +K GV R++ Sbjct: 131 QRTR---GSFRKGSLVGVKRRK 149 >gi|157876642|ref|XP_001686666.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin] gi|68129741|emb|CAJ09047.1| putative 40S ribosomal protein S18 [Leishmania major strain Friedlin] Length = 153 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153 >gi|311261966|ref|XP_003128953.1| PREDICTED: 40S ribosomal protein S18-like [Sus scrofa] Length = 200 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 25/143 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ I +++ A I G+G + + + K I +R +L E EV + + Sbjct: 60 ILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIM 119 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 120 QNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRV 179 Query: 99 RGQRTHTNARTRKKFGKGGVARK 121 GQ T T R V++K Sbjct: 180 GGQHTKTTGRRGHTVR---VSKK 199 >gi|58261282|ref|XP_568051.1| 30s ribosomal protein s13 [Cryptococcus neoformans var. neoformans JEC21] gi|134115685|ref|XP_773556.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256182|gb|EAL18909.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var. neoformans B-3501A] gi|57230133|gb|AAW46534.1| 30s ribosomal protein s13, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 194 Score = 100 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 59/160 (36%), Gaps = 47/160 (29%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 + G N+P K + AL +GI S + +L I E V QL E +V + + Sbjct: 2 HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSS 61 Query: 62 ----------------------------------------------QDYQVEGDLRRTVA 75 D ++E + RR + Sbjct: 62 PSTTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQ 121 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +I L +G YRG RH G PV GQRT TNA++ KK + Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKKHNR 161 >gi|322490674|emb|CBZ25936.1| putative 40S ribosomal protein S18 [Leishmania mexicana MHOM/GT/2001/U1103] gi|322490675|emb|CBZ25937.1| putative 40S ribosomal protein S18 [Leishmania mexicana MHOM/GT/2001/U1103] Length = 153 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVAFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL + +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153 >gi|15922391|ref|NP_378060.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7] gi|32363379|sp|Q96YV7|RS13_SULTO RecName: Full=30S ribosomal protein S13P gi|15623180|dbj|BAB67169.1| 172aa long hypothetical 30S ribosomal protein S13 [Sulfolobus tokodaii str. 7] Length = 172 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 22/123 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ +V AL + GIG+ +++ I KL + +RR+ +L + ++ +I + Sbjct: 10 IVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYL 69 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R + +RG+RH GL V Sbjct: 70 TDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKV 129 Query: 99 RGQ 101 RGQ Sbjct: 130 RGQ 132 >gi|27671346|ref|XP_234780.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|109482109|ref|XP_001058023.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 152 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH L V Sbjct: 72 QNPRQYKIPDWFLDRQKDVKDGKYSQVLAKGLDNKLHEDLERLKKIRAHRGLRHFWDLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 GQ + T R GV++K+ Sbjct: 132 GGQHSKTTGRRGHTV---GVSKKK 152 >gi|114669049|ref|XP_511822.2| PREDICTED: similar to ribosomal protein [Pan troglodytes] Length = 152 Score = 99 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I +R +L+E EV ++ + Sbjct: 12 ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELIEDEVERVVTIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGL H GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYNQVLANGLDNELREDLERLKKIRAHRGLSHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RG+ T T + V++K+ Sbjct: 132 RGRHTKTTGCRGRTVS---VSKKK 152 >gi|238491704|ref|XP_002377089.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357] gi|220697502|gb|EED53843.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357] Length = 107 Score = 99.6 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 +++L GIG S + + I P +V +L +V+ I A+ + ++E DLRR Sbjct: 1 MKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAALSE-MKIENDLRRQYL 59 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 +IKRL + G YRG RH GLPVRGQRT T Sbjct: 60 DDIKRLKETGTYRGRRHALGLPVRGQRTRT 89 >gi|134045319|ref|YP_001096805.1| 30S ribosomal protein S13P [Methanococcus maripaludis C5] gi|132662944|gb|ABO34590.1| SSU ribosomal protein S13P [Methanococcus maripaludis C5] Length = 149 Score = 99.2 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI+ ++ + AL + GIG ++ + + P+++ L + +V++I +E Sbjct: 11 RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + +E DL TV +I + + CY+G+RH LP RG Sbjct: 71 PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGVRHELRLPCRG 130 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 QRT + +K GV R++ Sbjct: 131 QRTR---GSFRKGTSMGVKRRK 149 >gi|207092547|ref|ZP_03240334.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_AG0C1] Length = 76 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 45/76 (59%), Positives = 55/76 (72%) Query: 45 VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 +H+L E EV I + I+Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T Sbjct: 1 MHELSEDEVSSIAKKIQQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTK 60 Query: 105 TNARTRKKFGKGGVAR 120 NARTRK K ++ Sbjct: 61 NNARTRKGKKKTVGSK 76 >gi|109126207|ref|XP_001091975.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca mulatta] Length = 149 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 28/144 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I +R +L E EV ++ Sbjct: 12 ILRVLNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLT 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + RGL H GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAPRGLCHFWGLRV 131 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T T GV++K+ Sbjct: 132 RGQHTKTTGLT------VGVSKKK 149 >gi|123492382|ref|XP_001326044.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|121908953|gb|EAY13821.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] Length = 155 Score = 98.8 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ + + AL I GIG + + + + + P RR L E I I Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + V DL + I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T + R G GV RK+ Sbjct: 134 RGQCTKSTGRRG---GALGVERKK 154 >gi|322827919|gb|EFZ31897.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] Length = 154 Score = 98.4 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 14 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL +RG+RH GL V Sbjct: 74 ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 134 RGQHTCTSGRHGKTV---GVSRTK 154 >gi|164658281|ref|XP_001730266.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966] gi|159104161|gb|EDP43052.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966] Length = 154 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 22/124 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ +++ AL I G+G + + +C K I +R +L E+ +I + Sbjct: 15 ILRLLNTNVDGKRKIQYALTEIKGVGRRYANIVCKKADIDLTKRAGELNSDELERIVNIL 74 Query: 61 ---------------EQDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++D+ D + + +++RL + +RGLRH L Sbjct: 75 QSPQEFKIPTWFLNRQKDFTTGKDAQVLSNNVEAKLRDDLERLKKIRAHRGLRHYWELRA 134 Query: 99 RGQR 102 RGQ Sbjct: 135 RGQH 138 >gi|71666149|ref|XP_820037.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener] gi|71666187|ref|XP_820056.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener] gi|70885364|gb|EAN98186.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] gi|70885383|gb|EAN98205.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi] Length = 153 Score = 98.4 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ +I + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 72 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + +++RL +RG+RH GL V Sbjct: 73 ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 133 RGQHTCTSGRHGKTV---GVSRTK 153 >gi|154345580|ref|XP_001568727.1| 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|154345582|ref|XP_001568728.1| 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066069|emb|CAM43857.1| putative 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066070|emb|CAM43858.1| putative 40S ribosomal protein S18 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 153 Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V AL + G+G + + +C K I ERR L E+ ++ + I Sbjct: 13 IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKTGIDVERRAGTLTAEELEKVAEVI 72 Query: 61 ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + ++ + + +++RL + +RG+RH GL V Sbjct: 73 VDPARFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T+ R K GV+R + Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153 >gi|94395371|ref|XP_909279.2| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|309269954|ref|XP_003084985.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 166 Score = 98.0 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 25/141 (17%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI +++ A+ I G+G + + + K I R +L E EV ++ ++ Sbjct: 29 VLNTNIYGLRKIAFAITAIKGVGRRYAHLVLRKADIDLTERAGELTEDEVERVITIMQNP 88 Query: 64 YQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQ 101 Q +G + +A + +RL + +R LRH GL VRGQ Sbjct: 89 RQYNIPDWFLNRQKDVKDGKCSQILANGPDNKLPEDPERLKKIRDHRELRHFWGLRVRGQ 148 Query: 102 RTHTNARTRKKFGKGGVARKR 122 T T R + GV++K+ Sbjct: 149 HTKTTGRRGRTM---GVSKKK 166 >gi|226292588|gb|EEH48008.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb18] Length = 157 Score = 97.6 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 ++AL GIG + + + + ++ L +++ + A+ + ++E DLRR + Sbjct: 48 MKALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQIL 106 Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +I+RL D+G RG RH GLPVRGQRT + +T K + Sbjct: 107 DDIQRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNR 146 >gi|167042197|gb|ABZ06929.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote HF4000_ANIW93I24] Length = 180 Score = 97.6 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 25/128 (19%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD----------- 63 +V L I G+G+ + I N L I P +R+ L +V I I+ Sbjct: 1 MVVGLTKIRGVGYMFANTIINVLKINPNQRIGYLSPEQVKSIESIIKNPSASNFPSWFLN 60 Query: 64 -----------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + + D+ TV +I+R G +RG+RH GL VRGQRT R K Sbjct: 61 RRKDIETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVRGQRTRCTGR---K 117 Query: 113 FGKGGVAR 120 G VA+ Sbjct: 118 GGAVSVAK 125 >gi|123367594|ref|XP_001297089.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123448087|ref|XP_001312777.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123453508|ref|XP_001314734.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123475112|ref|XP_001320735.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123479230|ref|XP_001322774.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123482954|ref|XP_001323914.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|123503102|ref|XP_001328438.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3] gi|121877055|gb|EAX84159.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121894636|gb|EAX99847.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121897372|gb|EAY02495.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121903547|gb|EAY08512.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121905626|gb|EAY10551.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121906788|gb|EAY11691.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] gi|121911381|gb|EAY16215.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3] Length = 155 Score = 96.9 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M R+ N+ + + AL I GIG + + + + + P RR L E I I Sbjct: 14 MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + V DL + I+R+ + RG+RH GL V Sbjct: 74 QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLGANIRAEIERMKKMRMKRGIRHGLGLKV 133 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T + R G GV RK+ Sbjct: 134 RGQCTKSTGRRG---GALGVERKK 154 >gi|300708772|ref|XP_002996559.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01] gi|239605870|gb|EEQ82888.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01] Length = 161 Score = 96.9 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ KRVV ALC I GIG + + IC + + RR L + E+ +I+ AI Sbjct: 21 IIRIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAI 80 Query: 61 EQDYQVE----------------GDLRRTVAMNIKRLMDLGCYRGLRHRR------GLPV 98 V + M+ + M L + +RH R GL V Sbjct: 81 NDPSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKV 140 Query: 99 RGQRTHTNAR 108 GQR+ +N R Sbjct: 141 HGQRSKSNGR 150 >gi|239811649|gb|ACS27136.1| ribosomal protein S13 [Heterosigma akashiwo] gi|239811689|gb|ACS27175.1| ribosomal protein S13 [Heterosigma akashiwo] Length = 126 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61 + NI + + L ++G+ +C +L + + + +S++ I + + E Sbjct: 2 FLLRTNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDE 61 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++ ++ DL++ V N K+L+ + YRG RH+ GLP RGQRTHTNART++K +K Sbjct: 62 KNVLIKDDLQKFVLDNKKQLIAIKTYRGSRHKEGLPTRGQRTHTNARTQRKLTSFKSKKK 121 >gi|213646546|ref|ZP_03376599.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 71 Score = 96.9 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQDYQVEGDLRR 72 + + VEGDLRR Sbjct: 61 AK-FVVEGDLRR 71 >gi|91228970|ref|ZP_01262865.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01] gi|91187490|gb|EAS73827.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01] Length = 71 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+GIG SQ I ++ I ++ +L E ++ Q+R + Sbjct: 1 MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60 Query: 61 EQDYQVEGDLRR 72 + Y VEGDLRR Sbjct: 61 AK-YTVEGDLRR 71 >gi|288871945|dbj|BAI70631.1| ribosomal protein S13 [Heterosigma akashiwo] Length = 126 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61 + NI + + L ++G+ +C +L + + + +S++ I + + E Sbjct: 2 FLLRTNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDE 61 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 ++ ++ DL++ V N K+L+ + YRG RH+ GLP RGQRTHTNART++K +K Sbjct: 62 KNVLIKDDLQKFVLDNKKQLIGIKTYRGSRHKEGLPTRGQRTHTNARTQRKLTSFKSKKK 121 >gi|7861934|gb|AAF70446.1|AF210641_1 Ke3 [Danio rerio] Length = 126 Score = 96.5 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 22/125 (17%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------ 65 +++ A+ I G+G + + + K I +R +L E EV ++ ++ Q Sbjct: 1 RRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDW 60 Query: 66 ----------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 + L + +++RL + +RGLRH GL VRGQ T T R Sbjct: 61 FLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRR 120 Query: 110 RKKFG 114 + G Sbjct: 121 GRTVG 125 >gi|296805123|ref|XP_002843386.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480] gi|238844688|gb|EEQ34350.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480] Length = 118 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 + + +AL GIG + + I P V +L +V+ + A+ + ++E DL+ Sbjct: 11 RQTIQKALRSFFGIGELRCNQLMARFHIHPTATVGELATRQVLDLTGALS-NMKIENDLK 69 Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 R + NIKRL D G YRG RH LPVRGQ T + ++ KF + Sbjct: 70 REILDNIKRLKDTGTYRGRRHALNLPVRGQNTRSQIKSAIKFNR 113 >gi|329907621|ref|ZP_08274691.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium IMCC9480] gi|327546926|gb|EGF31835.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium IMCC9480] Length = 69 Score = 95.7 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 1/70 (1%) Query: 53 VIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + ++R I + + VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK Sbjct: 1 MEKLRDEIAK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRKG 59 Query: 113 FGKGGVARKR 122 K + K+ Sbjct: 60 PRKAAQSLKK 69 >gi|289065187|ref|YP_003434239.1| ribosomal protein S13 [Chattonella marina] gi|288871899|dbj|BAI70586.1| ribosomal protein S13 [Chattonella marina] Length = 138 Score = 95.0 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61 + NIP ++ L I+G +C ++ + P L +S++ + + + E Sbjct: 2 FLLKTNIPLTNKLRTGLKKIYGFNDFFIYKMCKEIGLNPSLSFKNLKKSQIGLLLKWVNE 61 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + + +L++ N RL+ + YRGLRH+ GLP RGQRTHTN +T+++ Sbjct: 62 NNLLINDELKKNQLDNKNRLITIKSYRGLRHKNGLPTRGQRTHTNRKTQRRL 113 >gi|112799401|gb|ABI23025.1| SSU ribosomal protein S13AB [Candidatus Micrarchaeum acidiphilum ARMAN-2] gi|255513949|gb|EET90214.1| ribosomal protein S13 [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 177 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 29/147 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQI 56 + RIA +I + RAL + GIG S I +K I P + L ES+V Q+ Sbjct: 19 IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78 Query: 57 RQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 + I+ ++ + DL V +I R + L +RG RH+ Sbjct: 79 EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138 Query: 95 GLPVRGQRTHTNARTRKKFGKGGVARK 121 G VRGQ T + RT GV +K Sbjct: 139 GQKVRGQHTRSTGRTGATV---GVTKK 162 >gi|163752124|ref|ZP_02159329.1| 30S ribosomal protein S13 [Shewanella benthica KT99] gi|161327959|gb|EDP99134.1| 30S ribosomal protein S13 [Shewanella benthica KT99] Length = 71 Score = 94.6 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 1/69 (1%) Query: 49 VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108 E+++ +R+A+ + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNAR Sbjct: 2 SEAQIDILREAVAE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNAR 60 Query: 109 TRKKFGKGG 117 TRK K Sbjct: 61 TRKGPRKPI 69 >gi|315045402|ref|XP_003172076.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893] gi|311342462|gb|EFR01665.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893] Length = 118 Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 1/101 (0%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74 + +AL GIG + + I P V +L +V+ + A+ + ++E DL+R + Sbjct: 14 LQKALRSFFGIGELRCSQLMARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREI 72 Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 NIKRL G YRG RH LPVRGQ T + + KF + Sbjct: 73 LDNIKRLKSTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 113 >gi|253745946|gb|EET01539.1| Ribosomal protein S18 [Giardia intestinalis ATCC 50581] Length = 154 Score = 92.6 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ NI + AL I GIG + + K I +R +L +E + + +E Sbjct: 15 RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74 Query: 62 --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100 D++ D+ V M+++RL C RG+RH L VRG Sbjct: 75 PLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRMDLERLRKTRCERGVRHHHNLKVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T + R GV RK+ Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153 >gi|126309823|ref|XP_001377507.1| PREDICTED: similar to ribosomal protein [Monodelphis domestica] Length = 184 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 26/144 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 45 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 104 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL D +R L V Sbjct: 105 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLRD-SAHRASTLWGDLRV 163 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQ T T R + GV++K+ Sbjct: 164 RGQHTKTTGRRGRTV---GVSKKK 184 >gi|148709378|gb|EDL41324.1| mCG121998 [Mus musculus] Length = 134 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 25/137 (18%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD---- 63 NI +++ A+ I G+G + + + K I +R +L E EV ++ ++ Sbjct: 1 NINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYS 60 Query: 64 ----------YQVEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 Y +G L + +++RL + +R L H GL VRGQ T T Sbjct: 61 IPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQHTKT 120 Query: 106 NARTRKKFGKGGVARKR 122 R + G+++K+ Sbjct: 121 TGRRGRTM---GISKKK 134 >gi|316976096|gb|EFV59439.1| 40S ribosomal protein S18 [Trichinella spiralis] Length = 207 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 22/117 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +V AL I G+G + S +C K I +R +L E ++ + Sbjct: 64 ILRVMNTNIDGNAKVPYALTAIKGVGRRFSHAVCRKADISIHKRAGELTAEETDKLINVM 123 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 Q + L + +++RL + +RGLRH G Sbjct: 124 TNPKQYKIPDWFLNRRRDIKDGTTTQVLSTILDSKLREDLERLKKIRAHRGLRHYWG 180 >gi|262192754|gb|ACY30447.1| RPS18.A-like protein [Liriodendron tulipifera] Length = 197 Score = 92.3 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 34/147 (23%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR----VHQLVESEVIQI 56 + R+ N+ ++++ AL I GIG + + +C RR +L +E+ + Sbjct: 60 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK-----GRRRHEQEAGELSAAELENL 114 Query: 57 RQAIEQDY---------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + V L + + D +RGLRH G Sbjct: 115 MVIVANPDSSRFQTGFEQEEGLQGWRYSQVVSNALDMKLRDDWTTEED-QDHRGLRHYWG 173 Query: 96 LPVRGQRTHTNARTRKKFGKGGVARKR 122 L VRGQ T T R K GV++KR Sbjct: 174 LRVRGQHTKTTGRRGKTV---GVSKKR 197 >gi|308163385|gb|EFO65727.1| Ribosomal protein S18 [Giardia lamblia P15] Length = 154 Score = 91.9 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ NI + AL I GIG + + K I +R +L +E + + +E Sbjct: 15 RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74 Query: 62 --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100 D++ D+ V +++RL C RG+RH L VRG Sbjct: 75 PLSHGIPPWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T + R GV RK+ Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153 >gi|200004021|ref|YP_002221356.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328] gi|198385445|gb|ACH86039.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328] Length = 116 Score = 91.9 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 44/96 (45%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 L I+GI ++ I + L P ++ L + + + + Y + DL N Sbjct: 19 LNKIYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQFENNK 78 Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 K+ + L Y G+R + LP GQ TH+NA T KK Sbjct: 79 KQKILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKLN 114 >gi|110225694|ref|YP_665699.1| ribosomal protein S13 [Mesostigma viride] gi|17222565|gb|AAL36738.1|AF353999_18 ribosomal protein S13 [Mesostigma viride] Length = 116 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 6/104 (5%) Query: 13 KRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQIRQAIEQDYQVEG 68 K + L + G+G K+S IC + + P+ +++S ++ ++ + Sbjct: 13 KPIPILLQKVFGLGKKNSIQICRSMGLHERMSPKMSSKFILDSLQERLETSLGNS--LGA 70 Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 L + +N +RL+ + YRG RH RGLP RGQRT TNART +K Sbjct: 71 PLINRIHLNKERLIKISSYRGFRHHRGLPARGQRTRTNARTCRK 114 >gi|213028320|ref|ZP_03342767.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 62 Score = 91.5 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 34/62 (54%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MARIAG+NIP K V AL I+G+G S+ I I ++ +L E ++ +R + Sbjct: 1 MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60 Query: 61 EQ 62 + Sbjct: 61 AK 62 >gi|159107620|ref|XP_001704088.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803] gi|157432138|gb|EDO76414.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803] Length = 154 Score = 91.5 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 25/142 (17%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61 R+ NI + AL I GIG + + K I +R +L +E + + +E Sbjct: 15 RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74 Query: 62 --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100 D++ D+ V +++RL C RG+RH L VRG Sbjct: 75 PLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRG 134 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T + R GV RK+ Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153 >gi|200004049|ref|YP_002221383.1| ribosomal protein S13 [Blastocystis sp. NandII] gi|198385471|gb|ACH86064.1| ribosomal protein S13 [Blastocystis sp. NandII] Length = 115 Score = 91.1 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA-IEQDYQVEGDLRRTVAMN 77 L I+GI + ++ I L I V+ L + + QI + I+++Y + DL+ N Sbjct: 19 LNKIYGINTEQAKYILKNLGINTNISVNDLTQPLLKQINEFLIKKNYIINKDLQYKTNNN 78 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 IK + Y+G R + LP GQ TH+N +T KK Sbjct: 79 IKFKSLINTYKGFRLKNKLPCHGQNTHSNGKTAKK 113 >gi|269862378|ref|XP_002650814.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|269862740|ref|XP_002650957.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|269864585|ref|XP_002651624.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220064177|gb|EED42431.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220065356|gb|EED43099.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220065576|gb|EED43243.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] Length = 161 Score = 90.7 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 22/130 (16%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI K++V AL I G+G + ++ + + P + +L E+ I+ I Sbjct: 21 IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++ + V L + M I++ RG R GL Sbjct: 81 DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMGLKC 140 Query: 99 RGQRTHTNAR 108 GQRT +N R Sbjct: 141 NGQRTRSNGR 150 >gi|298253054|ref|ZP_06976846.1| ribosomal protein S13 [Gardnerella vaginalis 5-1] gi|297532449|gb|EFH71335.1| ribosomal protein S13 [Gardnerella vaginalis 5-1] Length = 70 Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 49/67 (73%) Query: 56 IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +R +E +Y++EGDLRR + +I+R + + CY+G RHR+GLPVRGQRT TNARTRK + Sbjct: 1 MRDYLEANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKR 60 Query: 116 GGVARKR 122 +K+ Sbjct: 61 TVAGKKK 67 >gi|15897041|ref|NP_341646.1| 30S ribosomal protein S13P [Sulfolobus solfataricus P2] gi|284173385|ref|ZP_06387354.1| 30S ribosomal protein S13P [Sulfolobus solfataricus 98/2] gi|2500459|sp|P95986|RS13_SULSO RecName: Full=30S ribosomal protein S13P gi|1707820|emb|CAA69528.1| ribosomal protein S18 [Sulfolobus solfataricus P2] gi|13813206|gb|AAK40436.1| SSU ribosomal protein S13AB (rps13AB) [Sulfolobus solfataricus P2] gi|261601695|gb|ACX91298.1| ribosomal protein S13P [Sulfolobus solfataricus 98/2] Length = 165 Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 22/121 (18%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI G ++ ++ AL + GIG+ +++ I KL + P R+ +L ++EV ++ I Sbjct: 9 VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVIS 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + V DL V +I+R +RG+RH GL VR Sbjct: 69 DHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128 Query: 100 G 100 G Sbjct: 129 G 129 >gi|330834006|ref|YP_004408734.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4] gi|329566145|gb|AEB94250.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4] Length = 163 Score = 89.9 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ +V L I GIG+ +++ I KL I +RR+ +L + E+ +I + + Sbjct: 9 IVRLFGQDVDGTMKVPYGLAMIKGIGYNTARVILMKLNIDKDRRLGELNDHELKKIEEFL 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R + +RG+RH GL V Sbjct: 69 SNKRLETLPSWMYNRRKDLETGLDMHYVTSDLVFVVRNDIEREKKIKSWRGIRHSLGLKV 128 Query: 99 RG 100 RG Sbjct: 129 RG 130 >gi|213024276|ref|ZP_03338723.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 65 Score = 89.2 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 43/64 (67%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Query: 54 IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 +R + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK Sbjct: 1 DTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 59 Query: 114 GKGG 117 K Sbjct: 60 CKPI 63 >gi|28189422|dbj|BAC56379.1| similar to 40S ribosomal protein S18 [Bos taurus] gi|28189799|dbj|BAC56514.1| similar to ribosomal protein S18 [Bos taurus] Length = 131 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 22/120 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131 >gi|56462228|gb|AAV91397.1| ribosomal protein 25 [Lonomia obliqua] Length = 116 Score = 88.4 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 25/119 (21%) Query: 26 GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ-------------------- 65 G + S + K I ++R + E EV +I + Q Sbjct: 1 GRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIIDGKYS 60 Query: 66 --VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +L + +++RL + +RG+RH GL VRGQ T T R + GV++K+ Sbjct: 61 QLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 116 >gi|47207607|emb|CAF90116.1| unnamed protein product [Tetraodon nigroviridis] Length = 132 Score = 88.0 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 25/116 (21%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------V 66 + + K I +R +L E EV ++ ++ Q + Sbjct: 20 YAHVVLRKADIDLNKRAGELTEEEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVL 79 Query: 67 EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 80 ANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 132 >gi|255018384|ref|ZP_05290510.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-515] Length = 68 Score = 87.6 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Query: 55 QIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 +IR+ +++ +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T NARTRK Sbjct: 2 KIREILDR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPS 60 Query: 115 KGGVARKR 122 K +K+ Sbjct: 61 KTVAGKKK 68 >gi|28189549|dbj|BAC56389.1| similar to ribosomal protein S18 [Bos taurus] Length = 125 Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 22/120 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 6 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 65 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q + L + +++RL + +RGLRH GL V Sbjct: 66 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125 >gi|159475653|ref|XP_001695933.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii] gi|158275493|gb|EDP01270.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii] Length = 124 Score = 87.2 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 52/114 (45%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 MA+I V + AL + G+G +S + I + +V + +S + ++ I Sbjct: 1 MAQIQRVALFPHATFHIALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYI 60 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114 E ++ L+R V N+ + + RG+RH GLPV +T +N +K Sbjct: 61 EANFVTGDTLKRQVRENVLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKLR 114 >gi|158187718|gb|ABW23148.1| ribosomal protein rps18 [Arenicola marina] Length = 114 Score = 87.2 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 25/117 (21%) Query: 28 KSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------------------- 65 + S +C K + +R +L + EV +I + Q Sbjct: 1 RYSHVVCKKADVDTSKRAGELSDEEVEKIVTIMSNPRQYKIPDWFLNRQKDVKDGKFSQI 60 Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 61 MSNVLDSKIREDLERLKKIRVHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 114 >gi|224032085|gb|ACN35118.1| unknown [Zea mays] Length = 129 Score = 87.2 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKEVGK 105 Query: 63 DYQVEGDL 70 Y +EGDL Sbjct: 106 -YMIEGDL 112 >gi|195653817|gb|ACG46376.1| 30S ribosomal protein S13 [Zea mays] Length = 124 Score = 87.2 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI GV IP KRV +L YIHGIG S+ I L + L E EVI +R+ + + Sbjct: 47 RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKEVGK 105 Query: 63 DYQVEGDLRRTVAMNI 78 Y +EGDL+R + I Sbjct: 106 -YMIEGDLKRFNRVVI 120 >gi|38085727|ref|XP_357690.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|82902991|ref|XP_917433.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 148 Score = 86.5 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 21/140 (15%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE--------SE 52 + R+ NI +++ A+ I G+G + + K I +R +L E + Sbjct: 12 ILRVLNTNIDGWQKIAFAITAIKGVGRSYAHVVLRKADIDLTKRAGELTECVITIMQNPQ 71 Query: 53 VIQI------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 +I RQ +D + + L + +++ L + +RGL H G V Q Sbjct: 72 QYKIPDWFLNRQKDVKDGKYRQVLANGLDNKLREDLEWLKKIRAHRGLHHFWGHRVCCQH 131 Query: 103 THTNARTRKKFGKGGVARKR 122 T T R GV++K+ Sbjct: 132 TKTTGRRGCTM---GVSKKK 148 >gi|324575274|gb|ADY49937.1| 30S ribosomal protein S13 [Ascaris suum] Length = 62 Score = 85.7 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 36/58 (62%), Positives = 44/58 (75%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +VEGDLRR V +NIKRLM++ YRG+RHRRGLPVRGQ T N+RTRK K +K+ Sbjct: 5 KVEGDLRREVQLNIKRLMEIASYRGIRHRRGLPVRGQHTKNNSRTRKGPRKTIANKKK 62 >gi|292559459|ref|YP_003540827.1| ribosomal protein S13 [Hartmannella vermiformis] gi|290775712|gb|ADD62211.1| ribosomal protein S13 [Hartmannella vermiformis] Length = 120 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 50/90 (55%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I+G+G+ S + KL + L + +++ Y E L+R+V +NI++ Sbjct: 22 IYGLGYSKSFHLLEKLGFSRLAWMQSLNLYRFNSLIFFLKKFYMTENILKRSVYLNIQKK 81 Query: 82 MDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 ++L Y G RH LP+RGQRTHTNA+T + Sbjct: 82 INLNNYAGFRHISNLPIRGQRTHTNAKTSR 111 >gi|301500973|ref|YP_003795438.1| ribosomal protein S13 [Alveolata sp. CCMP3155] gi|300069519|gb|ADJ66626.1| ribosomal protein S13 [Chromerida sp. RM11] Length = 127 Score = 85.3 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 1/112 (0%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ GV +P ++ + AL + GI + + + + P+RRV L +V Q+R + Sbjct: 16 RLEGVLLPSSQHIKHALTNLKGIQHGRASILLLRARLNPKRRVGLLTNEQVKQLRTSFSN 75 Query: 63 -DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113 + E L R+ ++ +RL + RG+R RR L RGQRT N +T K+F Sbjct: 76 ASFSTENVLMRSFFLSKQRLYEARLIRGVRLRRRLTNRGQRTKNNNKTIKRF 127 >gi|227831062|ref|YP_002832842.1| 30S ribosomal protein S13P [Sulfolobus islandicus L.S.2.15] gi|227457510|gb|ACP36197.1| ribosomal protein S13 [Sulfolobus islandicus L.S.2.15] Length = 166 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ I Sbjct: 9 VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVIS 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + V DL V +I+R +RG+RH GL VR Sbjct: 69 DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128 Query: 100 G 100 G Sbjct: 129 G 129 >gi|229579943|ref|YP_002838342.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.G.57.14] gi|229581396|ref|YP_002839795.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.N.15.51] gi|229585534|ref|YP_002844036.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.27] gi|238620496|ref|YP_002915322.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.4] gi|284998558|ref|YP_003420326.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5] gi|228010658|gb|ACP46420.1| ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14] gi|228012112|gb|ACP47873.1| ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51] gi|228020584|gb|ACP55991.1| ribosomal protein S13 [Sulfolobus islandicus M.16.27] gi|238381566|gb|ACR42654.1| ribosomal protein S13 [Sulfolobus islandicus M.16.4] gi|284446454|gb|ADB87956.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5] gi|323475374|gb|ADX85980.1| ribosomal protein S13 [Sulfolobus islandicus REY15A] gi|323478099|gb|ADX83337.1| ribosomal protein S13 [Sulfolobus islandicus HVE10/4] Length = 166 Score = 85.3 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ I Sbjct: 9 VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVIS 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + V DL V +I+R +RG+RH GL VR Sbjct: 69 DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128 Query: 100 G 100 G Sbjct: 129 G 129 >gi|114606879|ref|XP_001170276.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes] gi|119624101|gb|EAX03696.1| ribosomal protein S18, isoform CRA_c [Homo sapiens] Length = 128 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 22/117 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + Q + L + +++RL + +RGLRH G Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 >gi|269986619|gb|EEZ92901.1| ribosomal protein S13 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 179 Score = 84.6 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 25/146 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K+V L I GIGF S + L IP ++ L E ++ ++++A+ Sbjct: 26 IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + +LR M I+++ Y+G RH + Sbjct: 86 SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145 Query: 99 RGQRTHT---NARTRKKFGKGGVARK 121 RGQ+ + N R G V +K Sbjct: 146 RGQKVRSRGANVHGRVGSSLGVVRKK 171 >gi|227828304|ref|YP_002830084.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.14.25] gi|227460100|gb|ACP38786.1| ribosomal protein S13 [Sulfolobus islandicus M.14.25] Length = 166 Score = 84.2 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 RI G ++ ++ AL + GIG+ +++ + KL + P R+ +L ++++ ++ + Sbjct: 9 VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVLS 68 Query: 62 QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99 + V DL V +I+R +RG+RH GL VR Sbjct: 69 DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128 Query: 100 G 100 G Sbjct: 129 G 129 >gi|148665247|gb|EDK97663.1| mCG1037936 [Mus musculus] Length = 151 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 26/143 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ +I +++ + I +G + + K I + + E EV ++ + Sbjct: 12 ILRVLNTDIDGRQKIGFTITAIKVVGRSYAHVVLRKTDIDL-TKAGERTEDEVERVITIM 70 Query: 61 EQDYQV--------------EGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98 + Q G + + ++++L + +RGLRH GL V Sbjct: 71 QNPRQYRIPDWFLNRQKDGKGGKYSQALASGPDNKLREDLEQLKKIRAHRGLRHFCGLLV 130 Query: 99 RGQRTHTNARTRKKFGKGGVARK 121 RGQ T T R + GV++K Sbjct: 131 RGQHTKTTGRRGRTV---GVSKK 150 >gi|320101541|ref|YP_004177133.1| 30S ribosomal protein S13P [Desulfurococcus mucosus DSM 2162] gi|319753893|gb|ADV65651.1| SSU ribosomal protein S13P [Desulfurococcus mucosus DSM 2162] Length = 162 Score = 84.2 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI ++ +V L + G+G+ S +C L + P +R L + V I + + Sbjct: 10 IVRILETDVDGELPLVYGLSEVKGLGYAFSLAVCRVLGLDPRQRTGFLSDDTVKSIEEVV 69 Query: 61 E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 +DY DL V +I+R + +RG+RH GL V Sbjct: 70 RNPGKYGIPAWIYNRRKDYATGQDLHLTSANLIYYVKEDIEREKRIKSWRGIRHALGLKV 129 Query: 99 RG 100 RG Sbjct: 130 RG 131 >gi|148670323|gb|EDL02270.1| mCG49228 [Mus musculus] Length = 134 Score = 83.8 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 22/137 (16%) Query: 5 AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 NI +++ + I +G + + + K I + V +L E EV ++ ++ Sbjct: 1 LNTNIDGRRKIAFVITAIKDMGQRYTHVVLRKADIDLTKSVGELTEEEVERVITIMQNPR 60 Query: 65 Q-------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105 Q + + + +++RL + +RGL H GL VR Q T T Sbjct: 61 QYKIPDWFLNRQKDGKYSQVLANSIDSKLRESLERLKKIQAHRGLHHFWGLHVRSQHTKT 120 Query: 106 NARTRKKFGKGGVARKR 122 + GV++K+ Sbjct: 121 TGCRGRTV---GVSKKK 134 >gi|146304895|ref|YP_001192211.1| 30S ribosomal protein S13P [Metallosphaera sedula DSM 5348] gi|145703145|gb|ABP96287.1| SSU ribosomal protein S13P [Metallosphaera sedula DSM 5348] Length = 165 Score = 83.4 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ + L + GIG+ +++ I KL I ++R+ +L + E+ +I + + Sbjct: 9 IVRLFGQDVDGTMKAPYGLAMVKGIGYNTARVILMKLNIDKDKRLGELTDHELKKIEEML 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R L +RG+RH GL V Sbjct: 69 ANKKIESLPAWIFNRRKDIESGQDLHYVTSDLVFVVRNDIEREKKLKSWRGVRHSLGLKV 128 Query: 99 RG 100 RG Sbjct: 129 RG 130 >gi|290559361|gb|EFD92694.1| ribosomal protein S13 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 179 Score = 83.4 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 25/146 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RIA ++ +K V L I GI F S + L IP +++ L E E+ +++A+ Sbjct: 27 IVRIADTDLDGSKAVKDLLRSIPGISFSYSNALMKVLNIPKGKKLQDLDEKELNTLKEAL 86 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + DLR M I+++ YRG RH + Sbjct: 87 SDPFKYKIPHWLFNWRRDDETGLDYHLLSNDLRSKTTMRIQKIKTSRSYRGYRHSFNYKL 146 Query: 99 RGQRTHT---NARTRKKFGKGGVARK 121 RGQ+ + N R G V +K Sbjct: 147 RGQKVKSRGANVHGRVGSSLGVVKKK 172 >gi|238601365|ref|XP_002395391.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553] gi|215466046|gb|EEB96321.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553] Length = 162 Score = 83.0 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 34/54 (62%) Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 + +E +LRR + NI R +G Y GLRH GLPVRGQ T TNA+T KK + Sbjct: 105 NELVIETELRRQIRENIHRQRSIGSYVGLRHAMGLPVRGQNTQTNAKTAKKLNR 158 >gi|330929276|ref|XP_003302579.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1] gi|311321985|gb|EFQ89344.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1] Length = 92 Score = 82.6 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 K I P +V L S ++ + + + ++E DLRR V +I+RL D+G YRG RH Sbjct: 1 MAKFYIHPWAKVGSLKNSTLLDLTAEL-ANMKIENDLRRQVQDDIRRLRDMGTYRGRRHA 59 Query: 94 RGLPVRGQRTHTNARTRKKFGK 115 GLPVRGQ+T T T ++ K Sbjct: 60 MGLPVRGQKTRTQITTARRLNK 81 >gi|186522813|ref|NP_001119224.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis thaliana] gi|332004634|gb|AED92017.1| 30S ribosomal protein S13 [Arabidopsis thaliana] Length = 128 Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 AR+ GV IP KR+ +L YIHGIG ++ I L + + + E E+I +R + Sbjct: 48 ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106 Query: 62 QDYQVEGDL 70 + Y +EGDL Sbjct: 107 K-YMIEGDL 114 >gi|139438875|ref|ZP_01772335.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC 25986] gi|133775586|gb|EBA39406.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC 25986] Length = 59 Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 40/58 (68%), Positives = 46/58 (79%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 VEGDLRR N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK + A+K+ Sbjct: 1 MVEGDLRRERNQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGAKKK 58 >gi|218884677|ref|YP_002429059.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n] gi|218766293|gb|ACL11692.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n] Length = 174 Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ ++ +V L + G+G+ S IC L + PE+RV L + V I + + Sbjct: 22 IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81 Query: 61 ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98 ++DY +L V +I+R + +RG+RH GL V Sbjct: 82 RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141 Query: 99 RG 100 RG Sbjct: 142 RG 143 >gi|11466590|ref|NP_066480.1| ribosomal protein S13 [Rhodomonas salina] gi|10444177|gb|AAG17751.1|AF288090_27 ribosomal protein S13 [Rhodomonas salina] Length = 102 Score = 82.2 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 M RI + R K V AL I G+G + +CNK I +V L + +VI I + I Sbjct: 1 MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60 Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 +Q+ VE L+ V +IKRL+ + C+RG H++ +RG Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK---LRG 98 >gi|300120359|emb|CBK19913.2| unnamed protein product [Blastocystis hominis] gi|300175444|emb|CBK20755.2| unnamed protein product [Blastocystis hominis] gi|300175526|emb|CBK20837.2| unnamed protein product [Blastocystis hominis] Length = 111 Score = 81.5 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 25/113 (22%) Query: 32 DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------VEGD 69 +C K I RR +L E+ ++ I Q V + Sbjct: 2 AVCKKAEIDISRRAGELSNDEIEKLIAVISTPLQFDIPEWFLNRQKDVETGKYRQVVSNN 61 Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L+ + ++ RL + RGLRH L VRGQ T T R K GV+ K+ Sbjct: 62 LQANLREDLNRLKKMRANRGLRHYWNLKVRGQHTKTTGRFGKSV---GVSTKK 111 >gi|295672670|ref|XP_002796881.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01] gi|226282253|gb|EEH37819.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01] Length = 114 Score = 80.7 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 + + ++ L +++ + A+ + ++E DLRR + +I+RL D+G RG RH Sbjct: 1 MARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQILNDIQRLKDIGTIRGRRHA 59 Query: 94 RGLPVRGQRTHT 105 GLPVRGQRT + Sbjct: 60 LGLPVRGQRTRS 71 >gi|224284395|gb|ACN39932.1| unknown [Picea sitchensis] Length = 89 Score = 80.3 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 44/122 (36%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++++ AL I GIG + + +C K + +R Sbjct: 12 ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKR---------------- 55 Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +RGLRH GL VRGQ T T R K GV++ Sbjct: 56 -------------------------NHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSK 87 Query: 121 KR 122 KR Sbjct: 88 KR 89 >gi|310771932|emb|CBH28903.1| 40S RIBOSOMAL PROTEIN S18 [Anncaliia algerae] Length = 159 Score = 80.3 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 25/144 (17%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ N+ ++V A+ I GIG + ++ I + I +R +L E E+ + I Sbjct: 19 IIRMFNTNVDGNRKVAAAITMIKGIGKRMAEAIVKRTGIDSSKRAGELNEEELEILVDGI 78 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + + + T + ++R + R R L V Sbjct: 79 SNPKKLNIPEWMFNRVFDPVDGTTSHLIGTQIDATYRLQLERSKKIESVRSYRLMNNLKV 138 Query: 99 RGQRTHTNARTRKKFGKGGVARKR 122 RGQRT +N R GV+RK+ Sbjct: 139 RGQRTKSNGRGGSTV---GVSRKK 159 >gi|146420609|ref|XP_001486259.1| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC 6260] Length = 77 Score = 79.5 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 43 RRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 R++QL E +++ I + + D VEG L++ + +IK +G Y GLRH GLPVRGQR Sbjct: 1 MRMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGLRHASGLPVRGQR 59 Query: 103 THTNARTRKKFGK 115 T N+ T ++ + Sbjct: 60 TRNNSSTARRLNR 72 >gi|61252180|sp|P0A4B0|RS13_LACLC RecName: Full=30S ribosomal protein S13 gi|97982|pir||S17990 ribosomal protein S13 - Lactococcus lactis subsp. lactis (fragment) gi|44077|emb|CAA41943.1| ribosomal protein S13 [Lactococcus lactis] Length = 51 Score = 79.2 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVES 51 MAR AGV+IP KR+V +L Y+ G+G ++S+ + + + R L Sbjct: 1 MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSD 51 >gi|241997536|ref|XP_002433417.1| 40S ribosomal protein S18, putative [Ixodes scapularis] gi|215490840|gb|EEC00481.1| 40S ribosomal protein S18, putative [Ixodes scapularis] Length = 150 Score = 78.8 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 27/52 (51%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE 52 + R+ NI ++V+ AL I G+G + S +C K + +R +L E E Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEE 63 >gi|213612393|ref|ZP_03370219.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 51 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 39/49 (79%), Positives = 42/49 (85%) Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 DLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 1 DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 49 >gi|190345872|gb|EDK37832.2| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC 6260] Length = 77 Score = 78.4 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 43 RRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102 R++QL E +++ I + + D VEG L++ + +IK +G Y G RH GLPVRGQR Sbjct: 1 MRMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGSRHASGLPVRGQR 59 Query: 103 THTNARTRKKFGK 115 T N+ T ++ + Sbjct: 60 TRNNSSTARRLNR 72 >gi|11466207|ref|NP_066530.1| ribosomal protein S13 [Naegleria gruberi] gi|10444242|gb|AAG17808.1|AF288092_33 ribosomal protein S13 [Naegleria gruberi] Length = 163 Score = 78.0 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%) Query: 23 HGIGFKSSQDICNKLAIPPERRVHQLVESE----------VIQIRQA-IEQDYQVEGDLR 71 GIG ++ +C + P R+H +++ + +I+ + ++ L Sbjct: 37 FGIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLH 96 Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 + + I L + C +G RH LPVRGQR TNARTRK Sbjct: 97 KEMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136 >gi|302501654|ref|XP_003012819.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371] gi|291176379|gb|EFE32179.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371] Length = 92 Score = 76.8 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 + I P V +L +V+ + A+ + ++E DL+R + NIKRL G YRG RH Sbjct: 1 MARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILDNIKRLKTTGTYRGRRHA 59 Query: 94 RGLPVRGQRTHT 105 LPVRGQ T + Sbjct: 60 LNLPVRGQNTRS 71 >gi|241865174|gb|ACS68665.1| ribosomal protein S18 [Sonneratia alba] gi|241865406|gb|ACS68735.1| ribosomal protein S18 [Sonneratia alba] Length = 105 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 22/104 (21%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ N+ ++++ AL I GIG + + +C K + +R +L +E+ + + Sbjct: 2 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELDNLMVIVAN 61 Query: 63 DYQ----------------------VEGDLRRTVAMNIKRLMDL 84 Q V L + +++RL + Sbjct: 62 PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKI 105 >gi|145549051|ref|XP_001460205.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428034|emb|CAK92808.1| unnamed protein product [Paramecium tetraurelia] Length = 193 Score = 76.5 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 15/112 (13%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI N+ +++ + I GIG + + IC L + +R +L + E +I + I Sbjct: 14 IIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVI 73 Query: 61 ------------EQDYQV-EGDLRRTVAMNIKRLMDLG--CYRGLRHRRGLP 97 ++Y+V +L + +++R+ + + LRH GL Sbjct: 74 KMVPQYIRDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125 >gi|27661504|ref|XP_232915.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] gi|109476520|ref|XP_001058861.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 170 Score = 75.3 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 19/135 (14%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + NI + A+ G + + + K I + +L E +V ++ ++ Sbjct: 15 VLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELTEDKVERVITIMQNP 74 Query: 64 YQVE----------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 Q E L + ++RL + +RGLRH GL V Q T ++ Sbjct: 75 RQYEIPQKGVRDGRCSQVPANGLDNKLREELERLKKIRAHRGLRHFWGLHVHCQLTMSHG 134 Query: 108 RTRKKFGKGGVARKR 122 G ++K+ Sbjct: 135 CRGYTV---GASKKK 146 >gi|302662738|ref|XP_003023020.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517] gi|291186996|gb|EFE42402.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517] Length = 88 Score = 75.3 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 + I P V +L +V+ + A+ + ++E DL+R + NIKRL G YRG RH Sbjct: 1 MARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILDNIKRLKTTGTYRGRRHA 59 Query: 94 RGLPVRGQRTHT 105 LPVRGQ T + Sbjct: 60 LNLPVRGQNTRS 71 >gi|194771388|ref|XP_001967671.1| GF22723 [Drosophila ananassae] gi|190619389|gb|EDV34913.1| GF22723 [Drosophila ananassae] Length = 97 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 29/65 (44%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + RI NI ++V A+ I G+G + S + K + +R + E EV ++ I Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71 Query: 61 EQDYQ 65 Q Sbjct: 72 SNPLQ 76 >gi|154279122|ref|XP_001540374.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412317|gb|EDN07704.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|225562357|gb|EEH10636.1| 40S ribosomal protein S13 [Ajellomyces capsulatus G186AR] Length = 92 Score = 74.9 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 + + ++ L +V+ + A+ + ++E DLRR + +I+RL D G RG RH Sbjct: 1 MARFYVHETAKIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLKDTGTVRGRRHA 59 Query: 94 RGLPVRGQRTHTNARTRKKFGK 115 GLPVRGQ T + +T K K Sbjct: 60 LGLPVRGQNTRSQIKTAIKLNK 81 >gi|10802919|gb|AAG23667.1|AF288091_12 ribosomal protein S13 [Thraustochytrium aureum] Length = 120 Score = 74.5 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----V 66 + K + L IG + I + + + ES++ + IE+++ + Sbjct: 10 KNKTLFNVLRDTKSIGPIKIKYIAKITGLSLKTPISLFSESQLEHLSIWIEKNFTGSNCI 69 Query: 67 EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 + + + K+++ R LR ++GLPVRGQRT TNA+T K+ KG Sbjct: 70 HTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRGQRTKTNAKTAKRLNKG 119 >gi|261201520|ref|XP_002627160.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081] gi|239592219|gb|EEQ74800.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081] gi|239611623|gb|EEQ88610.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ER-3] gi|327357911|gb|EGE86768.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ATCC 18188] Length = 92 Score = 73.8 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 + + ++ L +V+ + A+ + ++E DLRR + +I+RL D G RG RH Sbjct: 1 MARFYVHETAKIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLRDTGTTRGRRHA 59 Query: 94 RGLPVRGQRTHTNARTRKKFGK 115 GLPVRGQ T + +T K K Sbjct: 60 LGLPVRGQNTRSQIKTAIKLNK 81 >gi|262401179|gb|ACY66492.1| 40S ribosomal protein S18 [Scylla paramamosain] Length = 77 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++V+ A+ I G+G + S + K I +R +L E EV +I + Sbjct: 12 ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQTKRAGELTEEEVEKIVTIM 71 Query: 61 EQDYQ 65 Q Sbjct: 72 SNPRQ 76 >gi|224980450|gb|ACN73088.1| COSII_At5g14320 [Solanum dulcamara] Length = 83 Score = 73.4 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG S++ I L + + + L E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLSEEEL 82 >gi|224980452|gb|ACN73089.1| COSII_At5g14320 [Datura inoxia] Length = 83 Score = 73.0 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG S++ I L + + + L E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLSEEEL 82 >gi|213647332|ref|ZP_03377385.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 44 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 35/42 (83%), Positives = 36/42 (85%) Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 1 MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 42 >gi|119624103|gb|EAX03698.1| ribosomal protein S18, isoform CRA_d [Homo sapiens] Length = 144 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ 65 + Q Sbjct: 72 QNPRQ 76 >gi|114329906|ref|YP_740808.1| ribosomal protein S13 [Tetrahymena pigmentosa] gi|114150139|gb|ABI51717.1| ribosomal protein S13 [Tetrahymena pigmentosa] Length = 276 Score = 72.6 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 44/89 (49%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 I+G + + I ++ + +SE + + I + + ++ V NI Sbjct: 24 KIYGWNNFTYKIIYDRFEKFYSNNLISYKDSEWKKFKSIILKFFPKSRSIKNRVDCNIFF 83 Query: 81 LMDLGCYRGLRHRRGLPVRGQRTHTNART 109 L L YRGLRH +GLPVRGQRT TNA + Sbjct: 84 LDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|148678284|gb|EDL10231.1| mCG23000, isoform CRA_a [Mus musculus] Length = 103 Score = 71.8 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI +++ A+ I G+G + + + K I +R +L E EV ++ + Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71 Query: 61 EQDYQ 65 + Q Sbjct: 72 QNPRQ 76 >gi|70605930|ref|YP_254800.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius DSM 639] gi|73920772|sp|P39470|RS13_SULAC RecName: Full=30S ribosomal protein S13P gi|68566578|gb|AAY79507.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius DSM 639] Length = 170 Score = 71.5 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 22/122 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ ++ AL I GIG+ ++ I KL + ++R+ ++ + ++ +I + Sbjct: 9 IVRLFGQDVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLL 68 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98 + V DL V +I+R +RG+RH GL V Sbjct: 69 NNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFYVRNDIERERRSRSWRGVRHSLGLKV 128 Query: 99 RG 100 RG Sbjct: 129 RG 130 >gi|224980432|gb|ACN73079.1| COSII_At5g14320 [Solanum peruvianum] Length = 83 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMSEEEL 82 >gi|11466256|ref|NP_049571.1| ribosomal protein S13 [Tetrahymena pyriformis] gi|5306132|gb|AAD41916.1|AF160864_4 ribosomal protein S13 [Tetrahymena pyriformis] Length = 276 Score = 71.5 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 I+G + + I + + ++E + + + + +L+ V NI Sbjct: 24 KIYGWKNYTYKIIYERFEKYYHNNIISYKDAEWKKFKSILLHFFPKSRNLKNRVDCNIFF 83 Query: 81 LMDLGCYRGLRHRRGLPVRGQRTHTNART 109 L L YRGLRH +GLPVRGQRT TNA + Sbjct: 84 LDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|224980416|gb|ACN73071.1| COSII_At5g14320 [Solanum cheesmaniae] gi|224980418|gb|ACN73072.1| COSII_At5g14320 [Solanum galapagense] gi|224980420|gb|ACN73073.1| COSII_At5g14320 [Solanum lycopersicum] gi|224980422|gb|ACN73074.1| COSII_At5g14320 [Solanum pimpinellifolium] gi|224980424|gb|ACN73075.1| COSII_At5g14320 [Solanum chmielewskii] gi|224980426|gb|ACN73076.1| COSII_At5g14320 [Solanum neorickii] gi|224980428|gb|ACN73077.1| COSII_At5g14320 [Solanum arcanum] gi|224980440|gb|ACN73083.1| COSII_At5g14320 [Solanum pennellii] gi|224980442|gb|ACN73084.1| COSII_At5g14320 [Solanum juglandifolium] Length = 83 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMSEEEL 82 >gi|289808335|ref|ZP_06538964.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 42 Score = 70.7 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 34/40 (85%), Positives = 34/40 (85%) Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK K Sbjct: 1 IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 40 >gi|224980698|gb|ACN73212.1| COSII_At5g14320 [Solanum stenophyllidium] Length = 83 Score = 70.3 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG S++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82 >gi|15027633|ref|NP_149367.1| ribosomal protein S13 [Tetrahymena thermophila] gi|15011469|gb|AAK77564.1|AF396436_4 ribosomal protein S13 [Tetrahymena thermophila] Length = 276 Score = 69.9 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++E + + + + L+ + NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 53 DTEWKKFKSILSTFFPKSRSLKNRMDTNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|224980434|gb|ACN73080.1| COSII_At5g14320 [Solanum corneliomuelleri] gi|224980436|gb|ACN73081.1| COSII_At5g14320 [Solanum chilense] Length = 83 Score = 69.5 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|224980430|gb|ACN73078.1| COSII_At5g14320 [Solanum huaylasense] Length = 83 Score = 69.5 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|83001915|ref|XP_899585.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus] gi|83002589|ref|XP_909720.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus] Length = 141 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 30/138 (21%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + +I ++ A+ I G+G + + K I +L E V + ++ Sbjct: 15 VLNTDIDGRWKIATAI--IKGVGRSYAHVVLRKTDI------GELTEDGVEHLITIMQNP 66 Query: 64 YQ-------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104 Q + L + + +RL + + GL H GL + GQ T Sbjct: 67 RQYRIPDWFLNRQKDGKYSQVLVNGLDNKLREDPERLKKIRAHSGLLHLWGLRIHGQHTK 126 Query: 105 TNARTRKKFGKGGVARKR 122 T + GV +K+ Sbjct: 127 TTGHGGRTV---GVFKKK 141 >gi|224980696|gb|ACN73211.1| COSII_At5g14320 [Solanum bulbocastanum] gi|224980700|gb|ACN73213.1| COSII_At5g14320 [Solanum trifidum] gi|224980702|gb|ACN73214.1| COSII_At5g14320 [Solanum polyadenium] Length = 83 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG S++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82 >gi|309266890|ref|XP_003086890.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] gi|309271450|ref|XP_003085324.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus] Length = 145 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 34/142 (23%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + +I ++ A+ I G+G + + K I +L E V + ++ Sbjct: 15 VLNTDIDGRWKIATAI--IKGVGRSYAHVVLRKTDI------GELTEDGVEHLITIMQNP 66 Query: 64 YQ-----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 Q + L + + +RL + + GL H GL + G Sbjct: 67 RQYRIPAPPPHWFLNRQKDGKYSQVLVNGLDNKLREDPERLKKIRAHSGLLHLWGLRIHG 126 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T T + GV +K+ Sbjct: 127 QHTKTTGHGGRTV---GVFKKK 145 >gi|224980706|gb|ACN73216.1| COSII_At5g14320 [Solanum andreanum] Length = 83 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG S++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82 >gi|110812358|gb|ABG91714.1| ribosomal protein S13 [Shewanella putrefaciens 200] Length = 44 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 34/42 (80%), Positives = 35/42 (83%) Query: 76 MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK K Sbjct: 1 MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 42 >gi|224980708|gb|ACN73217.1| COSII_At5g14320 [Solanum raphanifolium] Length = 83 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|224980438|gb|ACN73082.1| COSII_At5g14320 [Solanum habrochaites] gi|224980446|gb|ACN73086.1| COSII_At5g14320 [Solanum lycopersicoides] gi|224980448|gb|ACN73087.1| COSII_At5g14320 [Solanum sitiens] Length = 83 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|269866923|ref|XP_002652434.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] gi|220062509|gb|EED41622.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348] Length = 137 Score = 69.1 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 22/117 (18%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI K++V AL I G+G + ++ + + P + +L E+ I+ I Sbjct: 21 IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80 Query: 61 EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 ++ + V L + M I++ RG R G Sbjct: 81 DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMG 137 >gi|114329861|ref|YP_740764.1| ribosomal protein S13 [Tetrahymena paravorax] gi|114150094|gb|ABI51673.1| ribosomal protein S13 [Tetrahymena paravorax] Length = 276 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 32/60 (53%) Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++E + + + + +NI L + YRGLRH +GLPVRGQRT TNA + Sbjct: 53 DAEWKKFKSILSNFAPKNRTFKDRFNINIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|326485535|gb|EGE09545.1| 30S ribosomal protein S13p/S18e [Trichophyton equinum CBS 127.97] Length = 103 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 25/100 (25%) Query: 45 VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLM 82 ++ E+ +I I+ Q + + + +++RL Sbjct: 6 AGEISSEELERIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLK 65 Query: 83 DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 66 KIRAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 102 >gi|161899393|ref|XP_001712923.1| ribosomal protein S18 [Bigelowiella natans] gi|75756417|gb|ABA27311.1| ribosomal protein S18 [Bigelowiella natans] Length = 159 Score = 68.8 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 24/142 (16%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 RI NI + L I G+G + S + L +++ + ++++ ++ + Sbjct: 20 RIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEEVVNIFGK 79 Query: 63 D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 + + L + +IKRL+ + +GLRH L RG Sbjct: 80 SSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHLSRLKTRG 139 Query: 101 QRTHTNARTRKKFGKGGVARKR 122 Q T +N R K G V +K+ Sbjct: 140 QHTKSNGRRGKTIG--VVRKKK 159 >gi|224980710|gb|ACN73218.1| COSII_At5g14320 [Solanum brevicaule] gi|224980712|gb|ACN73219.1| COSII_At5g14320 [Solanum verrucosum] Length = 83 Score = 68.8 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|5441533|emb|CAB46821.1| Ribosomal protein [Canis lupus familiaris] Length = 97 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 25/100 (25%) Query: 45 VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLM 82 +L E EV ++ ++ Q + L + +++RL Sbjct: 1 AGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLK 60 Query: 83 DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 61 KIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 97 >gi|224980704|gb|ACN73215.1| COSII_At5g14320 [Solanum albornozii] Length = 83 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82 >gi|297790005|ref|XP_002862918.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp. lyrata] gi|297308691|gb|EFH39177.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp. lyrata] Length = 60 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 34/51 (66%) Query: 72 RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 R V I+RL+++ CYRG RHR G+P RGQRT TNART+K +K+ Sbjct: 6 RRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKAVAIAGKKK 56 >gi|114329815|ref|YP_740719.1| ribosomal protein S13 [Tetrahymena malaccensis] gi|114150048|gb|ABI51628.1| ribosomal protein S13 [Tetrahymena malaccensis] Length = 276 Score = 68.4 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 50 ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 ++E + + + + L+ + NI L L YRGLRH +GLPVRGQRT TNA + Sbjct: 53 DNEWKKFKAILITFFPKSRSLKNRIDTNIFFLEFLNTYRGLRHSKGLPVRGQRTWTNAWS 112 >gi|224980716|gb|ACN73221.1| COSII_At5g14320 [Solanum palustre] Length = 83 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KR+ +L YIHGIG S++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82 >gi|224980444|gb|ACN73085.1| COSII_At5g14320 [Solanum ochranthum] Length = 83 Score = 67.6 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KRV +L YIHGIG +++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRITARQILVDLQM-ENKVMKDMSEEEL 82 >gi|154313500|ref|XP_001556076.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10] gi|150849516|gb|EDN24709.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10] Length = 82 Score = 67.6 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 34/56 (60%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 +E +L+R + NI+R+ +G YRG RH GLPVRGQ T + T +K K +A Sbjct: 1 MPLETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNKDCIA 56 >gi|224980714|gb|ACN73220.1| COSII_At5g14320 [Solanum etuberosum] Length = 83 Score = 66.8 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 R+ GV +P KR+ +L YIHGIG S++ I L + + + + E E+ Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVHLQM-ENKVMKDMSEEEL 82 >gi|71725687|gb|AAZ38989.1| 40S ribosomal protein S18 [Oxyuranus scutellatus] Length = 95 Score = 66.4 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 25/98 (25%) Query: 47 QLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDL 84 +L E EV ++ ++ Q + L + +++RL + Sbjct: 1 ELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKI 60 Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 61 RAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 95 >gi|25553586|dbj|BAC24851.1| ribosomal protein S18-like [Oryza sativa Japonica Group] gi|50509336|dbj|BAD30794.1| ribosomal protein S18-like [Oryza sativa Japonica Group] Length = 145 Score = 66.1 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 V L + +++RL + +RGLRH GL VRGQ T T R K GV++KR Sbjct: 92 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 145 >gi|169837741|ref|ZP_02870929.1| 30S ribosomal protein S13 [candidate division TM7 single-cell isolate TM7a] Length = 53 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/36 (77%), Positives = 30/36 (83%) Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 NIKRL D+ YRGLRH+ GLPVRGQRT TNARTRK Sbjct: 2 NIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRKG 37 >gi|302023186|ref|ZP_07248397.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68] Length = 44 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 19/34 (55%), Positives = 25/34 (73%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC 34 MARIAGV+IP KRVV +L Y++GIG +S+ Sbjct: 1 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKFL 34 >gi|148683548|gb|EDL15495.1| mCG4355 [Mus musculus] Length = 142 Score = 65.7 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 22/103 (21%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ--------- 65 + A+ I G+G + + K I +R + E EV ++ ++ Q Sbjct: 6 IAFAITAIKGVGRSYAPVVLGKADIDLTKRAGEPTEDEVERVITIMQNPRQYKIPDWFLT 65 Query: 66 -------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95 + L + +++RL + +RGLR+ G Sbjct: 66 RQKDVKDGKCSQVLANGLDNKLRDDLERLKKIRAHRGLRYFWG 108 >gi|327186933|gb|AEA30871.1| hypothetical protein [Solanum dulcamara] Length = 73 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLS 73 >gi|121706874|ref|XP_001271657.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1] gi|119399805|gb|EAW10231.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1] Length = 57 Score = 65.3 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 28/52 (53%), Positives = 33/52 (63%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 ++E DLRR V +IKRL + G YRG RH GLPVRGQRT T T K + Sbjct: 1 MKIENDLRRQVLDDIKRLKETGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 52 >gi|301139172|gb|ADK66001.1| COSII_At5g14320 [Solanum andreanum] Length = 77 Score = 64.9 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|301139572|gb|ADK66201.1| COSII_At5g14320 [Solanum stenophyllidium] Length = 77 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + V + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVVKDMS 77 >gi|301139470|gb|ADK66150.1| COSII_At5g14320 [Solanum marinasense] Length = 77 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|517287|emb|CAA56477.1| ribosomal protein S13 [Sulfolobus acidocaldarius] Length = 184 Score = 64.5 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 23/121 (19%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ G ++ ++ AL I GIG+ ++ I KL + ++R+ ++ + ++ +I + Sbjct: 9 IVRLFGQDVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLL 68 Query: 61 ---------------EQDYQVEGDLRRTVAMNIKRLMDL--------GCYRGLRHRRGLP 97 ++DY+ D+ + I +++ +RG+RH GL Sbjct: 69 NNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFLQLEMILRGRGRSRSWRGVRHSLGLK 128 Query: 98 V 98 V Sbjct: 129 V 129 >gi|22653468|gb|AAN04078.1| ribosomal protein S13 [Amoebidium parasiticum] Length = 130 Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ-------------VE 67 ++GIG K I +L + + + E QI I++ + +E Sbjct: 25 KVYGIGEKEYATISVQLGLSSNQ-GRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIE 83 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +LR + I L ++ Y+G+RH++GLPV GQRT TNA + ++ Sbjct: 84 QNLRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNAISARR 128 >gi|301139558|gb|ADK66194.1| COSII_At5g14320 [Solanum x sambucinum] Length = 77 Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|301139200|gb|ADK66015.1| COSII_At5g14320 [Solanum stenophyllidium] gi|301139202|gb|ADK66016.1| COSII_At5g14320 [Solanum stenophyllidium] gi|301139570|gb|ADK66200.1| COSII_At5g14320 [Solanum stenophyllidium] Length = 77 Score = 64.1 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|301139364|gb|ADK66097.1| COSII_At5g14320 [Solanum huancabambense] gi|301139366|gb|ADK66098.1| COSII_At5g14320 [Solanum huancabambense] gi|301139374|gb|ADK66102.1| COSII_At5g14320 [Solanum huancabambense] gi|301139376|gb|ADK66103.1| COSII_At5g14320 [Solanum huancabambense] Length = 77 Score = 63.8 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|301139434|gb|ADK66132.1| COSII_At5g14320 [Solanum jalcae] Length = 74 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 28 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 74 >gi|301139248|gb|ADK66039.1| COSII_At5g14320 [Solanum chomatophilum] Length = 77 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMS 77 >gi|301139210|gb|ADK66020.1| COSII_At5g14320 [Solanum chilliasense] gi|301139222|gb|ADK66026.1| COSII_At5g14320 [Solanum chomatophilum] Length = 77 Score = 63.8 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMS 77 >gi|119616402|gb|EAW95996.1| hCG1642200 [Homo sapiens] Length = 112 Score = 63.8 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 30/65 (46%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + + K I RV +L E EV + + Sbjct: 12 ILRVFKTNIDEWCKITFAITAIKGVGQRYAHVVLRKADIDLTSRVGELTEDEVECVITMM 71 Query: 61 EQDYQ 65 + +Q Sbjct: 72 QNPHQ 76 >gi|327186963|gb|AEA30886.1| hypothetical protein [Solanum hougasii] Length = 73 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|226473484|emb|CAX71427.1| ribosomal protein S18 [Schistosoma japonicum] Length = 82 Score = 63.4 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RG+RH GL VRGQ T T R + GV+RK+ Sbjct: 33 LETKLREDLERLKRIRSHRGIRHYWGLRVRGQHTKTTGRRGRTV---GVSRKK 82 >gi|114599203|ref|XP_526860.2| PREDICTED: similar to ribosomal protein [Pan troglodytes] Length = 112 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + R+ NI ++ A+ I G+G + + K I RV +L E EV + Sbjct: 12 ILRVFNTNIDEWCKITFAITAIKGVGQIYAHVVLRKADIDLTSRVGELTEDEVECVITMT 71 Query: 61 EQDYQ 65 + +Q Sbjct: 72 QNPHQ 76 >gi|327187113|gb|AEA30961.1| hypothetical protein [Solanum stoloniferum] gi|327187137|gb|AEA30973.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|327186831|gb|AEA30820.1| hypothetical protein [Solanum agrimonifolium] Length = 73 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|301139450|gb|ADK66140.1| COSII_At5g14320 [Solanum mochiquense] Length = 77 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|326516128|dbj|BAJ88087.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 100 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 47 TSSTLDSKLREDLERLKKIKAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 100 >gi|301139544|gb|ADK66187.1| COSII_At5g14320 [Solanum scabrifolium] Length = 77 Score = 63.4 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|310769817|gb|ADP21466.1| ribosomal protein S18 [Antheraea yamamai] Length = 82 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +L + +++RL + +RG+RH GL VRGQ T T R + GV++K+ Sbjct: 29 TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 82 >gi|4139068|gb|AAD03679.1| ribosomal protein S18 [Cricetulus sp.] Length = 95 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 25/97 (25%) Query: 48 LVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLG 85 L E EV ++ ++ Q + L + +++RL + Sbjct: 2 LNEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIR 61 Query: 86 CYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 62 AHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 95 >gi|508718|gb|AAC36889.1| homolog [Chlamydia trachomatis] Length = 46 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 29/45 (64%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV 45 M RI G++IP K++ +L YI+GIG S++I +L + PE R Sbjct: 1 MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARA 45 >gi|301139574|gb|ADK66202.1| COSII_At5g14320 [Solanum tarnii] gi|301139576|gb|ADK66203.1| COSII_At5g14320 [Solanum tarnii] gi|301139578|gb|ADK66204.1| COSII_At5g14320 [Solanum tarnii] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|327186939|gb|AEA30874.1| hypothetical protein [Solanum hjertingii] gi|327186943|gb|AEA30876.1| hypothetical protein [Solanum hjertingii] gi|327186947|gb|AEA30878.1| hypothetical protein [Solanum hjertingii] gi|327186951|gb|AEA30880.1| hypothetical protein [Solanum hjertingii] gi|327186955|gb|AEA30882.1| hypothetical protein [Solanum hjertingii] gi|327186959|gb|AEA30884.1| hypothetical protein [Solanum hjertingii] gi|327187061|gb|AEA30935.1| hypothetical protein [Solanum schenckii] gi|327187067|gb|AEA30938.1| hypothetical protein [Solanum schenckii] gi|327187073|gb|AEA30941.1| hypothetical protein [Solanum schenckii] gi|327187079|gb|AEA30944.1| hypothetical protein [Solanum schenckii] gi|327187083|gb|AEA30946.1| hypothetical protein [Solanum schenckii] gi|327187089|gb|AEA30949.1| hypothetical protein [Solanum schenckii] gi|327187097|gb|AEA30953.1| hypothetical protein [Solanum stoloniferum] gi|327187101|gb|AEA30955.1| hypothetical protein [Solanum stoloniferum] gi|327187105|gb|AEA30957.1| hypothetical protein [Solanum stoloniferum] gi|327187109|gb|AEA30959.1| hypothetical protein [Solanum stoloniferum] gi|327187123|gb|AEA30966.1| hypothetical protein [Solanum stoloniferum] gi|327187129|gb|AEA30969.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|301139454|gb|ADK66142.1| COSII_At5g14320 [Solanum mochiquense] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139416|gb|ADK66123.1| COSII_At5g14320 [Solanum immite] Length = 71 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 25 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKMMKDMS 71 >gi|301139452|gb|ADK66141.1| COSII_At5g14320 [Solanum mochiquense] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139460|gb|ADK66145.1| COSII_At5g14320 [Solanum mochiquense] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139456|gb|ADK66143.1| COSII_At5g14320 [Solanum mochiquense] Length = 76 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76 >gi|301139268|gb|ADK66049.1| COSII_At5g14320 [Solanum chancayense] gi|301139368|gb|ADK66099.1| COSII_At5g14320 [Solanum huancabambense] gi|301139370|gb|ADK66100.1| COSII_At5g14320 [Solanum huancabambense] gi|301139372|gb|ADK66101.1| COSII_At5g14320 [Solanum huancabambense] gi|301139448|gb|ADK66139.1| COSII_At5g14320 [Solanum mochiquense] gi|301139580|gb|ADK66205.1| COSII_At5g14320 [Solanum trinitense] gi|301139582|gb|ADK66206.1| COSII_At5g14320 [Solanum trinitense] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139216|gb|ADK66023.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139540|gb|ADK66185.1| COSII_At5g14320 [Solanum piurae] Length = 67 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 67 >gi|327186829|gb|AEA30819.1| hypothetical protein [Solanum agrimonifolium] gi|327186833|gb|AEA30821.1| hypothetical protein [Solanum agrimonifolium] gi|327186835|gb|AEA30822.1| hypothetical protein [Solanum agrimonifolium] gi|327186859|gb|AEA30834.1| hypothetical protein [Solanum albicans] gi|327186875|gb|AEA30842.1| hypothetical protein [Solanum chomatophilum] gi|327186887|gb|AEA30848.1| hypothetical protein [Solanum colombianum] gi|327186965|gb|AEA30887.1| hypothetical protein [Solanum hougasii] gi|327186971|gb|AEA30890.1| hypothetical protein [Solanum hougasii] gi|327186977|gb|AEA30893.1| hypothetical protein [Solanum hougasii] gi|327186983|gb|AEA30896.1| hypothetical protein [Solanum hougasii] gi|327186989|gb|AEA30899.1| hypothetical protein [Solanum hougasii] gi|327187001|gb|AEA30905.1| hypothetical protein [Solanum iopetalum] gi|327187007|gb|AEA30908.1| hypothetical protein [Solanum iopetalum] gi|327187013|gb|AEA30911.1| hypothetical protein [Solanum iopetalum] gi|327187025|gb|AEA30917.1| hypothetical protein [Solanum iopetalum] gi|327187043|gb|AEA30926.1| hypothetical protein [Solanum moscopanum] gi|327187045|gb|AEA30927.1| hypothetical protein [Solanum moscopanum] gi|327187049|gb|AEA30929.1| hypothetical protein [Solanum moscopanum] gi|327187051|gb|AEA30930.1| hypothetical protein [Solanum moscopanum] gi|327187055|gb|AEA30932.1| hypothetical protein [Solanum piurae] gi|327187063|gb|AEA30936.1| hypothetical protein [Solanum schenckii] gi|327187069|gb|AEA30939.1| hypothetical protein [Solanum schenckii] gi|327187085|gb|AEA30947.1| hypothetical protein [Solanum schenckii] gi|327187091|gb|AEA30950.1| hypothetical protein [Solanum schenckii] gi|327187125|gb|AEA30967.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|301139164|gb|ADK65997.1| COSII_At5g14320 [Solanum andreanum] gi|301139166|gb|ADK65998.1| COSII_At5g14320 [Solanum andreanum] gi|301139168|gb|ADK65999.1| COSII_At5g14320 [Solanum andreanum] gi|301139170|gb|ADK66000.1| COSII_At5g14320 [Solanum andreanum] gi|301139174|gb|ADK66002.1| COSII_At5g14320 [Solanum andreanum] gi|301139176|gb|ADK66003.1| COSII_At5g14320 [Solanum andreanum] gi|301139178|gb|ADK66004.1| COSII_At5g14320 [Solanum andreanum] gi|301139180|gb|ADK66005.1| COSII_At5g14320 [Solanum andreanum] gi|301139218|gb|ADK66024.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139220|gb|ADK66025.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139224|gb|ADK66027.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139226|gb|ADK66028.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139228|gb|ADK66029.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139234|gb|ADK66032.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139236|gb|ADK66033.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139238|gb|ADK66034.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139242|gb|ADK66036.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139244|gb|ADK66037.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139246|gb|ADK66038.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139254|gb|ADK66042.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139262|gb|ADK66046.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139264|gb|ADK66047.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139266|gb|ADK66048.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139362|gb|ADK66096.1| COSII_At5g14320 [Solanum huancabambense] gi|301139426|gb|ADK66128.1| COSII_At5g14320 [Solanum jalcae] gi|301139428|gb|ADK66129.1| COSII_At5g14320 [Solanum jalcae] gi|301139432|gb|ADK66131.1| COSII_At5g14320 [Solanum jalcae] gi|301139462|gb|ADK66146.1| COSII_At5g14320 [Solanum minutifoliolum] gi|301139472|gb|ADK66151.1| COSII_At5g14320 [Solanum marinasense] gi|301139500|gb|ADK66165.1| COSII_At5g14320 [Solanum paucijugum] gi|301139502|gb|ADK66166.1| COSII_At5g14320 [Solanum paucijugum] gi|301139504|gb|ADK66167.1| COSII_At5g14320 [Solanum paucijugum] gi|301139506|gb|ADK66168.1| COSII_At5g14320 [Solanum paucijugum] gi|301139508|gb|ADK66169.1| COSII_At5g14320 [Solanum paucijugum] gi|301139512|gb|ADK66171.1| COSII_At5g14320 [Solanum paucijugum] gi|301139514|gb|ADK66172.1| COSII_At5g14320 [Solanum paucijugum] gi|301139518|gb|ADK66174.1| COSII_At5g14320 [Solanum paucissectum] gi|301139520|gb|ADK66175.1| COSII_At5g14320 [Solanum paucissectum] gi|301139536|gb|ADK66183.1| COSII_At5g14320 [Solanum piurae] gi|301139542|gb|ADK66186.1| COSII_At5g14320 [Solanum piurae] gi|301139566|gb|ADK66198.1| COSII_At5g14320 [Solanum solisii] gi|301139584|gb|ADK66207.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139586|gb|ADK66208.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139588|gb|ADK66209.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139590|gb|ADK66210.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139592|gb|ADK66211.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139594|gb|ADK66212.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139596|gb|ADK66213.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139598|gb|ADK66214.1| COSII_At5g14320 [Solanum tuquerrense] gi|301139600|gb|ADK66215.1| COSII_At5g14320 [Solanum tuquerrense] Length = 77 Score = 63.0 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|301139396|gb|ADK66113.1| COSII_At5g14320 [Solanum huarochiriense] gi|301139398|gb|ADK66114.1| COSII_At5g14320 [Solanum huarochiriense] gi|301139402|gb|ADK66116.1| COSII_At5g14320 [Solanum huarochiriense] Length = 77 Score = 62.6 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139270|gb|ADK66050.1| COSII_At5g14320 [Solanum chancayense] Length = 77 Score = 62.6 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDVS 77 >gi|301139212|gb|ADK66021.1| COSII_At5g14320 [Solanum chomatophilum] Length = 66 Score = 62.6 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 66 >gi|301139484|gb|ADK66157.1| COSII_At5g14320 [Solanum marinasense] Length = 67 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 67 >gi|301139528|gb|ADK66179.1| COSII_At5g14320 [Solanum peloquinianum] Length = 77 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|327187121|gb|AEA30965.1| hypothetical protein [Solanum stoloniferum] Length = 73 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG ++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 73 >gi|282931689|ref|ZP_06337181.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1] gi|281304187|gb|EFA96297.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1] Length = 33 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 19/30 (63%), Positives = 25/30 (83%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSS 30 MARIAGV++PR KR+V AL YI+GIG ++ Sbjct: 4 MARIAGVDLPREKRIVVALTYIYGIGEPTA 33 >gi|327186969|gb|AEA30889.1| hypothetical protein [Solanum hougasii] gi|327186975|gb|AEA30892.1| hypothetical protein [Solanum hougasii] gi|327186981|gb|AEA30895.1| hypothetical protein [Solanum hougasii] gi|327186987|gb|AEA30898.1| hypothetical protein [Solanum hougasii] Length = 73 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|301139446|gb|ADK66138.1| COSII_At5g14320 [Solanum mochiquense] Length = 77 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 75 >gi|327186883|gb|AEA30846.1| hypothetical protein [Solanum colombianum] Length = 73 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|301139154|gb|ADK65992.1| COSII_At5g14320 [Solanum albornozii] gi|301139156|gb|ADK65993.1| COSII_At5g14320 [Solanum albornozii] gi|301139162|gb|ADK65996.1| COSII_At5g14320 [Solanum acroscopicum] gi|301139188|gb|ADK66009.1| COSII_At5g14320 [Solanum anamatophilum] gi|301139190|gb|ADK66010.1| COSII_At5g14320 [Solanum anamatophilum] gi|301139198|gb|ADK66014.1| COSII_At5g14320 [Solanum brevicaule] gi|301139274|gb|ADK66052.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139278|gb|ADK66054.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139282|gb|ADK66056.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139284|gb|ADK66057.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139286|gb|ADK66058.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139288|gb|ADK66059.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139290|gb|ADK66060.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139292|gb|ADK66061.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139294|gb|ADK66062.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139296|gb|ADK66063.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139298|gb|ADK66064.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139302|gb|ADK66066.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139306|gb|ADK66068.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139308|gb|ADK66069.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139310|gb|ADK66070.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139312|gb|ADK66071.1| COSII_At5g14320 [Solanum cajamarquense] gi|301139326|gb|ADK66078.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139330|gb|ADK66080.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139332|gb|ADK66081.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139336|gb|ADK66083.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139340|gb|ADK66085.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139342|gb|ADK66086.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139344|gb|ADK66087.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139346|gb|ADK66088.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139348|gb|ADK66089.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139350|gb|ADK66090.1| COSII_At5g14320 [Solanum dolichocremastrum] gi|301139404|gb|ADK66117.1| COSII_At5g14320 [Solanum infundibuliforme] gi|301139406|gb|ADK66118.1| COSII_At5g14320 [Solanum infundibuliforme] gi|301139408|gb|ADK66119.1| COSII_At5g14320 [Solanum infundibuliforme] gi|301139410|gb|ADK66120.1| COSII_At5g14320 [Solanum ingifolium] gi|301139412|gb|ADK66121.1| COSII_At5g14320 [Solanum immite] gi|301139418|gb|ADK66124.1| COSII_At5g14320 [Solanum jalcae] gi|301139430|gb|ADK66130.1| COSII_At5g14320 [Solanum jalcae] gi|301139436|gb|ADK66133.1| COSII_At5g14320 [Solanum kurtzianum] gi|301139438|gb|ADK66134.1| COSII_At5g14320 [Solanum limbaniense] gi|301139440|gb|ADK66135.1| COSII_At5g14320 [Solanum leptophyes] gi|301139442|gb|ADK66136.1| COSII_At5g14320 [Solanum leptophyes] gi|301139444|gb|ADK66137.1| COSII_At5g14320 [Solanum laxissimum] gi|301139464|gb|ADK66147.1| COSII_At5g14320 [Solanum marinasense] gi|301139466|gb|ADK66148.1| COSII_At5g14320 [Solanum marinasense] gi|301139476|gb|ADK66153.1| COSII_At5g14320 [Solanum marinasense] gi|301139478|gb|ADK66154.1| COSII_At5g14320 [Solanum marinasense] gi|301139480|gb|ADK66155.1| COSII_At5g14320 [Solanum marinasense] gi|301139482|gb|ADK66156.1| COSII_At5g14320 [Solanum marinasense] gi|301139486|gb|ADK66158.1| COSII_At5g14320 [Solanum multiinterruptum] gi|301139488|gb|ADK66159.1| COSII_At5g14320 [Solanum multiinterruptum] gi|301139492|gb|ADK66161.1| COSII_At5g14320 [Solanum multiinterruptum] gi|301139494|gb|ADK66162.1| COSII_At5g14320 [Solanum olmosense] gi|301139532|gb|ADK66181.1| COSII_At5g14320 [Solanum peloquinianum] gi|301139534|gb|ADK66182.1| COSII_At5g14320 [Solanum peloquinianum] gi|301139546|gb|ADK66188.1| COSII_At5g14320 [Solanum sogarandinum] gi|301139550|gb|ADK66190.1| COSII_At5g14320 [Solanum sogarandinum] gi|301139552|gb|ADK66191.1| COSII_At5g14320 [Solanum sogarandinum] gi|301139554|gb|ADK66192.1| COSII_At5g14320 [Solanum sogarandinum] gi|301139556|gb|ADK66193.1| COSII_At5g14320 [Solanum sogarandinum] gi|301139560|gb|ADK66195.1| COSII_At5g14320 [Solanum simplicissimum] gi|301139602|gb|ADK66216.1| COSII_At5g14320 [Solanum urubambae] gi|301139604|gb|ADK66217.1| COSII_At5g14320 [Solanum verrucosum] gi|301139606|gb|ADK66218.1| COSII_At5g14320 [Solanum violaceimarmoratum] gi|301139608|gb|ADK66219.1| COSII_At5g14320 [Solanum yungasense] Length = 77 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|327186817|gb|AEA30813.1| hypothetical protein [Solanum acaule] gi|327186819|gb|AEA30814.1| hypothetical protein [Solanum acaule] gi|327186821|gb|AEA30815.1| hypothetical protein [Solanum acaule] gi|327186823|gb|AEA30816.1| hypothetical protein [Solanum acaule] gi|327186825|gb|AEA30817.1| hypothetical protein [Solanum acaule] gi|327186827|gb|AEA30818.1| hypothetical protein [Solanum acaule] gi|327186837|gb|AEA30823.1| hypothetical protein [Solanum albicans] gi|327186839|gb|AEA30824.1| hypothetical protein [Solanum albicans] gi|327186841|gb|AEA30825.1| hypothetical protein [Solanum albicans] gi|327186843|gb|AEA30826.1| hypothetical protein [Solanum albicans] gi|327186845|gb|AEA30827.1| hypothetical protein [Solanum albicans] gi|327186847|gb|AEA30828.1| hypothetical protein [Solanum albicans] gi|327186851|gb|AEA30830.1| hypothetical protein [Solanum albicans] gi|327186853|gb|AEA30831.1| hypothetical protein [Solanum albicans] gi|327186855|gb|AEA30832.1| hypothetical protein [Solanum albicans] gi|327186857|gb|AEA30833.1| hypothetical protein [Solanum albicans] gi|327186861|gb|AEA30835.1| hypothetical protein [Solanum avilesii] gi|327186865|gb|AEA30837.1| hypothetical protein [Solanum boliviense] gi|327186869|gb|AEA30839.1| hypothetical protein [Solanum chacoense] gi|327186877|gb|AEA30843.1| hypothetical protein [Solanum chiquidenum] gi|327186879|gb|AEA30844.1| hypothetical protein [Solanum cajamarquense] gi|327186885|gb|AEA30847.1| hypothetical protein [Solanum colombianum] gi|327186891|gb|AEA30850.1| hypothetical protein [Solanum demissum] gi|327186893|gb|AEA30851.1| hypothetical protein [Solanum demissum] gi|327186895|gb|AEA30852.1| hypothetical protein [Solanum demissum] gi|327186897|gb|AEA30853.1| hypothetical protein [Solanum demissum] gi|327186899|gb|AEA30854.1| hypothetical protein [Solanum demissum] gi|327186901|gb|AEA30855.1| hypothetical protein [Solanum demissum] gi|327186903|gb|AEA30856.1| hypothetical protein [Solanum demissum] gi|327186905|gb|AEA30857.1| hypothetical protein [Solanum demissum] gi|327186907|gb|AEA30858.1| hypothetical protein [Solanum demissum] gi|327186909|gb|AEA30859.1| hypothetical protein [Solanum demissum] gi|327186911|gb|AEA30860.1| hypothetical protein [Solanum demissum] gi|327186913|gb|AEA30861.1| hypothetical protein [Solanum demissum] gi|327186915|gb|AEA30862.1| hypothetical protein [Solanum demissum] gi|327186917|gb|AEA30863.1| hypothetical protein [Solanum demissum] gi|327186919|gb|AEA30864.1| hypothetical protein [Solanum demissum] gi|327186921|gb|AEA30865.1| hypothetical protein [Solanum demissum] gi|327186923|gb|AEA30866.1| hypothetical protein [Solanum demissum] gi|327186925|gb|AEA30867.1| hypothetical protein [Solanum demissum] gi|327186927|gb|AEA30868.1| hypothetical protein [Solanum demissum] gi|327186929|gb|AEA30869.1| hypothetical protein [Solanum demissum] gi|327186931|gb|AEA30870.1| hypothetical protein [Solanum demissum] gi|327186941|gb|AEA30875.1| hypothetical protein [Solanum hjertingii] gi|327186945|gb|AEA30877.1| hypothetical protein [Solanum hjertingii] gi|327186949|gb|AEA30879.1| hypothetical protein [Solanum hjertingii] gi|327186953|gb|AEA30881.1| hypothetical protein [Solanum hjertingii] gi|327186957|gb|AEA30883.1| hypothetical protein [Solanum hjertingii] gi|327186961|gb|AEA30885.1| hypothetical protein [Solanum hjertingii] gi|327186967|gb|AEA30888.1| hypothetical protein [Solanum hougasii] gi|327186973|gb|AEA30891.1| hypothetical protein [Solanum hougasii] gi|327186979|gb|AEA30894.1| hypothetical protein [Solanum hougasii] gi|327186991|gb|AEA30900.1| hypothetical protein [Solanum hougasii] gi|327186993|gb|AEA30901.1| hypothetical protein [Solanum infundibuliforme] gi|327186997|gb|AEA30903.1| hypothetical protein [Solanum iopetalum] gi|327186999|gb|AEA30904.1| hypothetical protein [Solanum iopetalum] gi|327187003|gb|AEA30906.1| hypothetical protein [Solanum iopetalum] gi|327187005|gb|AEA30907.1| hypothetical protein [Solanum iopetalum] gi|327187009|gb|AEA30909.1| hypothetical protein [Solanum iopetalum] gi|327187011|gb|AEA30910.1| hypothetical protein [Solanum iopetalum] gi|327187015|gb|AEA30912.1| hypothetical protein [Solanum iopetalum] gi|327187017|gb|AEA30913.1| hypothetical protein [Solanum iopetalum] gi|327187019|gb|AEA30914.1| hypothetical protein [Solanum iopetalum] gi|327187021|gb|AEA30915.1| hypothetical protein [Solanum iopetalum] gi|327187023|gb|AEA30916.1| hypothetical protein [Solanum iopetalum] gi|327187027|gb|AEA30918.1| hypothetical protein [Solanum iopetalum] gi|327187029|gb|AEA30919.1| hypothetical protein [Solanum iopetalum] gi|327187033|gb|AEA30921.1| hypothetical protein [Solanum iopetalum] gi|327187035|gb|AEA30922.1| hypothetical protein [Solanum iopetalum] gi|327187041|gb|AEA30925.1| hypothetical protein [Solanum microdontum] gi|327187047|gb|AEA30928.1| hypothetical protein [Solanum moscopanum] gi|327187053|gb|AEA30931.1| hypothetical protein [Solanum moscopanum] gi|327187057|gb|AEA30933.1| hypothetical protein [Solanum santolallae] gi|327187059|gb|AEA30934.1| hypothetical protein [Solanum santolallae] gi|327187065|gb|AEA30937.1| hypothetical protein [Solanum schenckii] gi|327187071|gb|AEA30940.1| hypothetical protein [Solanum schenckii] gi|327187077|gb|AEA30943.1| hypothetical protein [Solanum schenckii] gi|327187081|gb|AEA30945.1| hypothetical protein [Solanum schenckii] gi|327187087|gb|AEA30948.1| hypothetical protein [Solanum schenckii] gi|327187093|gb|AEA30951.1| hypothetical protein [Solanum schenckii] gi|327187095|gb|AEA30952.1| hypothetical protein [Solanum sparsipilum] gi|327187099|gb|AEA30954.1| hypothetical protein [Solanum stoloniferum] gi|327187103|gb|AEA30956.1| hypothetical protein [Solanum stoloniferum] gi|327187107|gb|AEA30958.1| hypothetical protein [Solanum stoloniferum] gi|327187111|gb|AEA30960.1| hypothetical protein [Solanum stoloniferum] gi|327187115|gb|AEA30962.1| hypothetical protein [Solanum stoloniferum] gi|327187117|gb|AEA30963.1| hypothetical protein [Solanum stoloniferum] gi|327187119|gb|AEA30964.1| hypothetical protein [Solanum stoloniferum] gi|327187127|gb|AEA30968.1| hypothetical protein [Solanum stoloniferum] gi|327187131|gb|AEA30970.1| hypothetical protein [Solanum stoloniferum] gi|327187133|gb|AEA30971.1| hypothetical protein [Solanum stoloniferum] gi|327187135|gb|AEA30972.1| hypothetical protein [Solanum stoloniferum] gi|327187139|gb|AEA30974.1| hypothetical protein [Solanum stoloniferum] gi|327187141|gb|AEA30975.1| hypothetical protein [Solanum tarijense] gi|327187143|gb|AEA30976.1| hypothetical protein [Solanum urubambae] gi|327187147|gb|AEA30978.1| hypothetical protein [Solanum violaceimarmoratum] Length = 73 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73 >gi|313509192|gb|ADR65906.1| hypothetical protein [Solanum agrimonifolium] gi|313509196|gb|ADR65908.1| hypothetical protein [Solanum agrimonifolium] gi|313509200|gb|ADR65910.1| hypothetical protein [Solanum agrimonifolium] gi|313509206|gb|ADR65913.1| hypothetical protein [Solanum colombianum] gi|313509212|gb|ADR65916.1| hypothetical protein [Solanum colombianum] gi|313509214|gb|ADR65917.1| hypothetical protein [Solanum colombianum] gi|313509220|gb|ADR65920.1| hypothetical protein [Solanum colombianum] gi|313509222|gb|ADR65921.1| hypothetical protein [Solanum colombianum] gi|313509226|gb|ADR65923.1| hypothetical protein [Solanum colombianum] gi|313509232|gb|ADR65926.1| hypothetical protein [Solanum colombianum] gi|313509234|gb|ADR65927.1| hypothetical protein [Solanum colombianum] gi|313509236|gb|ADR65928.1| hypothetical protein [Solanum colombianum] gi|313509240|gb|ADR65930.1| hypothetical protein [Solanum colombianum] gi|313509242|gb|ADR65931.1| hypothetical protein [Solanum colombianum] gi|313509246|gb|ADR65933.1| hypothetical protein [Solanum colombianum] gi|313509250|gb|ADR65935.1| hypothetical protein [Solanum colombianum] gi|313509254|gb|ADR65937.1| hypothetical protein [Solanum flahaultii] gi|313509256|gb|ADR65938.1| hypothetical protein [Solanum flahaultii] gi|313509258|gb|ADR65939.1| hypothetical protein [Solanum flahaultii] gi|313509264|gb|ADR65942.1| hypothetical protein [Solanum garcia-barrigae] gi|313509266|gb|ADR65943.1| hypothetical protein [Solanum lobbianum] gi|313509270|gb|ADR65945.1| hypothetical protein [Solanum longiconicum] gi|313509274|gb|ADR65947.1| hypothetical protein [Solanum longiconicum] gi|313509280|gb|ADR65950.1| hypothetical protein [Solanum longiconicum] gi|313509296|gb|ADR65958.1| hypothetical protein [Solanum moscopanum] gi|313509298|gb|ADR65959.1| hypothetical protein [Solanum moscopanum] gi|313509302|gb|ADR65961.1| hypothetical protein [Solanum moscopanum] gi|313509306|gb|ADR65963.1| hypothetical protein [Solanum moscopanum] gi|313509308|gb|ADR65964.1| hypothetical protein [Solanum moscopanum] gi|313509310|gb|ADR65965.1| hypothetical protein [Solanum moscopanum] gi|313509312|gb|ADR65966.1| hypothetical protein [Solanum moscopanum] gi|313509316|gb|ADR65968.1| hypothetical protein [Solanum moscopanum] gi|313509318|gb|ADR65969.1| hypothetical protein [Solanum moscopanum] gi|313509328|gb|ADR65974.1| hypothetical protein [Solanum orocense] gi|313509330|gb|ADR65975.1| hypothetical protein [Solanum otites] gi|313509332|gb|ADR65976.1| hypothetical protein [Solanum oxycarpum] gi|313509336|gb|ADR65978.1| hypothetical protein [Solanum oxycarpum] gi|313509340|gb|ADR65980.1| hypothetical protein [Solanum oxycarpum] gi|313509356|gb|ADR65988.1| hypothetical protein [Solanum sucubunense] gi|313509358|gb|ADR65989.1| hypothetical protein [Solanum sucubunense] gi|313509360|gb|ADR65990.1| hypothetical protein [Solanum tundalomense] gi|313509366|gb|ADR65993.1| hypothetical protein [Solanum tundalomense] gi|313509368|gb|ADR65994.1| hypothetical protein [Solanum tundalomense] gi|313509372|gb|ADR65996.1| hypothetical protein [Solanum tundalomense] gi|313509376|gb|ADR65998.1| hypothetical protein [Solanum tundalomense] gi|313509378|gb|ADR65999.1| hypothetical protein [Solanum tundalomense] gi|313509420|gb|ADR66020.1| hypothetical protein [Solanum woodsonii] Length = 78 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78 >gi|301139458|gb|ADK66144.1| COSII_At5g14320 [Solanum mochiquense] Length = 76 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76 >gi|301139324|gb|ADK66077.1| COSII_At5g14320 [Solanum contumazaense] Length = 77 Score = 62.6 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139564|gb|ADK66197.1| COSII_At5g14320 [Solanum simplicissimum] Length = 66 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 66 >gi|301139414|gb|ADK66122.1| COSII_At5g14320 [Solanum immite] Length = 77 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKMMKDMS 77 >gi|313509416|gb|ADR66018.1| hypothetical protein [Solanum violaceimarmoratum] Length = 78 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|551831|gb|AAA83903.1| ribosomal protein S13 [Escherichia coli] gi|554544|gb|AAA72457.1| S13 protein (gtg start codon) [synthetic construct] Length = 36 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 18/36 (50%), Positives = 22/36 (61%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNK 36 MARIAG+NIP K V AL I+G+G S+ I Sbjct: 1 MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAA 36 >gi|327187037|gb|AEA30923.1| hypothetical protein [Solanum lignicaule] Length = 73 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73 >gi|324537231|gb|ADY49494.1| 40S ribosomal protein S18 [Ascaris suum] Length = 91 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 40 LDNKLREDLERLKKIRLHRGLRHYWGLRVRGQHTKTTGRKGRTV---GVSKKK 89 >gi|301139240|gb|ADK66035.1| COSII_At5g14320 [Solanum chomatophilum] Length = 68 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG ++ I L + + + + Sbjct: 22 VRVGGVEVPNNKRVEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 68 >gi|313509338|gb|ADR65979.1| hypothetical protein [Solanum oxycarpum] Length = 78 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|301139150|gb|ADK65990.1| COSII_At5g14320 [Solanum albornozii] gi|301139152|gb|ADK65991.1| COSII_At5g14320 [Solanum albornozii] gi|301139194|gb|ADK66012.1| COSII_At5g14320 [Solanum x blanco-galdosii] gi|301139474|gb|ADK66152.1| COSII_At5g14320 [Solanum marinasense] Length = 77 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|313509224|gb|ADR65922.1| hypothetical protein [Solanum colombianum] Length = 78 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78 >gi|301139184|gb|ADK66007.1| COSII_At5g14320 [Solanum augustii] Length = 67 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 67 >gi|240276444|gb|EER39956.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H143] Length = 77 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 24/46 (52%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVH 46 + R+ N+ ++++ AL I G+G + S +C K + +R+ Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRIG 59 >gi|238597051|ref|XP_002394222.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553] gi|215462901|gb|EEB95152.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553] Length = 79 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Query: 62 QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 +DYQ+ ++ + +++RL + +RGLRH GL VRGQ T T R K GV++ Sbjct: 20 KDYQILSTNVDSKLRDDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGKTV---GVSK 76 Query: 121 KR 122 KR Sbjct: 77 KR 78 >gi|313509190|gb|ADR65905.1| hypothetical protein [Solanum agrimonifolium] gi|313509194|gb|ADR65907.1| hypothetical protein [Solanum agrimonifolium] gi|313509198|gb|ADR65909.1| hypothetical protein [Solanum agrimonifolium] gi|313509208|gb|ADR65914.1| hypothetical protein [Solanum colombianum] gi|313509210|gb|ADR65915.1| hypothetical protein [Solanum colombianum] gi|313509216|gb|ADR65918.1| hypothetical protein [Solanum colombianum] gi|313509218|gb|ADR65919.1| hypothetical protein [Solanum colombianum] gi|313509228|gb|ADR65924.1| hypothetical protein [Solanum colombianum] gi|313509230|gb|ADR65925.1| hypothetical protein [Solanum colombianum] gi|313509238|gb|ADR65929.1| hypothetical protein [Solanum colombianum] gi|313509244|gb|ADR65932.1| hypothetical protein [Solanum colombianum] gi|313509248|gb|ADR65934.1| hypothetical protein [Solanum colombianum] gi|313509252|gb|ADR65936.1| hypothetical protein [Solanum colombianum] gi|313509260|gb|ADR65940.1| hypothetical protein [Solanum flahaultii] gi|313509262|gb|ADR65941.1| hypothetical protein [Solanum garcia-barrigae] gi|313509268|gb|ADR65944.1| hypothetical protein [Solanum lobbianum] gi|313509272|gb|ADR65946.1| hypothetical protein [Solanum longiconicum] gi|313509276|gb|ADR65948.1| hypothetical protein [Solanum longiconicum] gi|313509278|gb|ADR65949.1| hypothetical protein [Solanum longiconicum] gi|313509282|gb|ADR65951.1| hypothetical protein [Solanum limbaniense] gi|313509284|gb|ADR65952.1| hypothetical protein [Solanum limbaniense] gi|313509288|gb|ADR65954.1| hypothetical protein [Solanum limbaniense] gi|313509290|gb|ADR65955.1| hypothetical protein [Solanum limbaniense] gi|313509292|gb|ADR65956.1| hypothetical protein [Solanum limbaniense] gi|313509294|gb|ADR65957.1| hypothetical protein [Solanum laxissimum] gi|313509300|gb|ADR65960.1| hypothetical protein [Solanum moscopanum] gi|313509304|gb|ADR65962.1| hypothetical protein [Solanum moscopanum] gi|313509314|gb|ADR65967.1| hypothetical protein [Solanum moscopanum] gi|313509322|gb|ADR65971.1| hypothetical protein [Solanum moscopanum] gi|313509324|gb|ADR65972.1| hypothetical protein [Solanum nubicola] gi|313509326|gb|ADR65973.1| hypothetical protein [Solanum orocense] gi|313509334|gb|ADR65977.1| hypothetical protein [Solanum oxycarpum] gi|313509342|gb|ADR65981.1| hypothetical protein [Solanum pillahuatense] gi|313509344|gb|ADR65982.1| hypothetical protein [Solanum santolallae] gi|313509346|gb|ADR65983.1| hypothetical protein [Solanum santolallae] gi|313509348|gb|ADR65984.1| hypothetical protein [Solanum santolallae] gi|313509350|gb|ADR65985.1| hypothetical protein [Solanum santolallae] gi|313509352|gb|ADR65986.1| hypothetical protein [Solanum sucubunense] gi|313509362|gb|ADR65991.1| hypothetical protein [Solanum tundalomense] gi|313509370|gb|ADR65995.1| hypothetical protein [Solanum tundalomense] gi|313509374|gb|ADR65997.1| hypothetical protein [Solanum tundalomense] gi|313509380|gb|ADR66000.1| hypothetical protein [Solanum urubambae] gi|313509382|gb|ADR66001.1| hypothetical protein [Solanum urubambae] gi|313509384|gb|ADR66002.1| hypothetical protein [Solanum urubambae] gi|313509386|gb|ADR66003.1| hypothetical protein [Solanum urubambae] gi|313509388|gb|ADR66004.1| hypothetical protein [Solanum urubambae] gi|313509390|gb|ADR66005.1| hypothetical protein [Solanum urubambae] gi|313509392|gb|ADR66006.1| hypothetical protein [Solanum urubambae] gi|313509394|gb|ADR66007.1| hypothetical protein [Solanum urubambae] gi|313509396|gb|ADR66008.1| hypothetical protein [Solanum urubambae] gi|313509400|gb|ADR66010.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509404|gb|ADR66012.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509406|gb|ADR66013.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509408|gb|ADR66014.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509410|gb|ADR66015.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509412|gb|ADR66016.1| hypothetical protein [Solanum violaceimarmoratum] gi|313509418|gb|ADR66019.1| hypothetical protein [Solanum woodsonii] Length = 78 Score = 62.2 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|301139380|gb|ADK66105.1| COSII_At5g14320 [Solanum hypacrarthrum] Length = 77 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139196|gb|ADK66013.1| COSII_At5g14320 [Solanum x blanco-galdosii] Length = 66 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 66 >gi|327186871|gb|AEA30840.1| hypothetical protein [Solanum chilliasense] gi|327186881|gb|AEA30845.1| hypothetical protein [Solanum cantense] gi|327186937|gb|AEA30873.1| hypothetical protein [Solanum hypacrarthrum] Length = 73 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73 >gi|301139304|gb|ADK66067.1| COSII_At5g14320 [Solanum cajamarquense] Length = 75 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 29 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 75 >gi|301139158|gb|ADK65994.1| COSII_At5g14320 [Solanum acroglossum] gi|301139182|gb|ADK66006.1| COSII_At5g14320 [Solanum augustii] gi|301139192|gb|ADK66011.1| COSII_At5g14320 [Solanum x blanco-galdosii] gi|301139208|gb|ADK66019.1| COSII_At5g14320 [Solanum chilliasense] gi|301139232|gb|ADK66031.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139250|gb|ADK66040.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139252|gb|ADK66041.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139256|gb|ADK66043.1| COSII_At5g14320 [Solanum chomatophilum] gi|301139280|gb|ADK66055.1| COSII_At5g14320 [Solanum chiquidenum] gi|301139314|gb|ADK66072.1| COSII_At5g14320 [Solanum cantense] gi|301139316|gb|ADK66073.1| COSII_At5g14320 [Solanum cantense] gi|301139318|gb|ADK66074.1| COSII_At5g14320 [Solanum cantense] gi|301139320|gb|ADK66075.1| COSII_At5g14320 [Solanum cantense] gi|301139322|gb|ADK66076.1| COSII_At5g14320 [Solanum cantense] gi|301139358|gb|ADK66094.1| COSII_At5g14320 [Solanum guzmanguense] gi|301139360|gb|ADK66095.1| COSII_At5g14320 [Solanum guzmanguense] gi|301139378|gb|ADK66104.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139382|gb|ADK66106.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139384|gb|ADK66107.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139386|gb|ADK66108.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139388|gb|ADK66109.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139390|gb|ADK66110.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139392|gb|ADK66111.1| COSII_At5g14320 [Solanum hypacrarthrum] gi|301139420|gb|ADK66125.1| COSII_At5g14320 [Solanum jalcae] gi|301139422|gb|ADK66126.1| COSII_At5g14320 [Solanum jalcae] gi|301139424|gb|ADK66127.1| COSII_At5g14320 [Solanum jalcae] gi|301139490|gb|ADK66160.1| COSII_At5g14320 [Solanum multiinterruptum] gi|301139510|gb|ADK66170.1| COSII_At5g14320 [Solanum paucijugum] gi|301139522|gb|ADK66176.1| COSII_At5g14320 [Solanum paucissectum] gi|301139524|gb|ADK66177.1| COSII_At5g14320 [Solanum paucissectum] gi|301139526|gb|ADK66178.1| COSII_At5g14320 [Solanum paucissectum] gi|301139530|gb|ADK66180.1| COSII_At5g14320 [Solanum peloquinianum] gi|301139538|gb|ADK66184.1| COSII_At5g14320 [Solanum piurae] gi|301139562|gb|ADK66196.1| COSII_At5g14320 [Solanum simplicissimum] Length = 77 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139300|gb|ADK66065.1| COSII_At5g14320 [Solanum cajamarquense] Length = 76 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76 >gi|301139186|gb|ADK66008.1| COSII_At5g14320 [Solanum ambosinum] gi|301139206|gb|ADK66018.1| COSII_At5g14320 [Solanum bukasovii] gi|301139468|gb|ADK66149.1| COSII_At5g14320 [Solanum marinasense] Length = 77 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KR+ +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|327186867|gb|AEA30838.1| hypothetical protein [Solanum bukasovii] Length = 73 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KR+ +L YIHGIG S++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73 >gi|322699777|gb|EFY91536.1| 30S ribosomal protein S13 [Metarhizium acridum CQMa 102] Length = 119 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93 K +I +V L V + + Q +E D RR V NI+RL D+G YRG RH Sbjct: 1 MAKYSIHKLAKVGSLSPRTVTSLTAELSQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHA 59 Query: 94 RGLP 97 GLP Sbjct: 60 MGLP 63 >gi|109073538|ref|XP_001090113.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca mulatta] gi|297292185|ref|XP_002804033.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] gi|66347229|emb|CAI95617.1| ribosomal protein S18 [Homo sapiens] gi|119600194|gb|EAW79788.1| hCG1777176, isoform CRA_a [Homo sapiens] gi|119624099|gb|EAX03694.1| ribosomal protein S18, isoform CRA_a [Homo sapiens] gi|119624102|gb|EAX03697.1| ribosomal protein S18, isoform CRA_a [Homo sapiens] gi|119624104|gb|EAX03699.1| ribosomal protein S18, isoform CRA_a [Homo sapiens] gi|149043392|gb|EDL96843.1| rCG60872, isoform CRA_b [Rattus norvegicus] Length = 82 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 33 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 82 >gi|301139548|gb|ADK66189.1| COSII_At5g14320 [Solanum sogarandinum] Length = 77 Score = 61.8 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139272|gb|ADK66051.1| COSII_At5g14320 [Solanum chancayense] Length = 77 Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHG+G +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGVGRTAARQILVDLQM-ENKVMKDMS 77 >gi|327186985|gb|AEA30897.1| hypothetical protein [Solanum hougasii] Length = 73 Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73 >gi|313509398|gb|ADR66009.1| hypothetical protein [Solanum violaceimarmoratum] Length = 78 Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|301139498|gb|ADK66164.1| COSII_At5g14320 [Solanum pascoense] Length = 77 Score = 61.4 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139352|gb|ADK66091.1| COSII_At5g14320 [Solanum fernandezianum] gi|301139354|gb|ADK66092.1| COSII_At5g14320 [Solanum fernandezianum] gi|301139356|gb|ADK66093.1| COSII_At5g14320 [Solanum fernandezianum] Length = 77 Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KR+ +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|313509402|gb|ADR66011.1| hypothetical protein [Solanum violaceimarmoratum] Length = 78 Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KR+ +L YIHGIG S++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78 >gi|301353227|ref|YP_003795224.1| ribosomal protein S13 [Proteromonas lacertae] gi|290573175|gb|ADD46362.1| ribosomal protein S13 [Proteromonas lacertae] Length = 129 Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 11/102 (10%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---EGDLRRTVA 75 L I+ I + ICNKL P +++ ++ I + + ++ ++ Sbjct: 23 LTSIYSINLPKAIGICNKLGFNPNKQLK--TIKDIDFILKILSNFLKLVEKNDKIKSKKL 80 Query: 76 MNI------KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111 NI L + + R + GLPV GQRTH+N + K Sbjct: 81 HNIETIAYLNNLKNTKNLKYYRLKNGLPVHGQRTHSNGQIAK 122 >gi|313509320|gb|ADR65970.1| hypothetical protein [Solanum moscopanum] gi|313509364|gb|ADR65992.1| hypothetical protein [Solanum tundalomense] Length = 78 Score = 61.4 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ETKVMKDMS 78 >gi|301139160|gb|ADK65995.1| COSII_At5g14320 [Solanum acroglossum] gi|301139334|gb|ADK66082.1| COSII_At5g14320 [Solanum dolichocremastrum] Length = 76 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 75 >gi|327187039|gb|AEA30924.1| hypothetical protein [Solanum limbaniense] Length = 72 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 71 >gi|301139260|gb|ADK66045.1| COSII_At5g14320 [Solanum chomatophilum] Length = 75 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG S++ I L + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVVLQM-ENKVMKD 75 >gi|301139276|gb|ADK66053.1| COSII_At5g14320 [Solanum chiquidenum] Length = 77 Score = 61.1 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|327186935|gb|AEA30872.1| hypothetical protein [Solanum gandarillasii] Length = 63 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 19 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 63 >gi|301139400|gb|ADK66115.1| COSII_At5g14320 [Solanum huarochiriense] Length = 77 Score = 60.7 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|11465886|ref|NP_066435.1| ribosomal protein S13 [Ochromonas danica] gi|10505219|gb|AAG18401.1|AF287134_26 ribosomal protein S13 [Ochromonas danica] Length = 125 Score = 60.7 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 24/49 (48%), Positives = 33/49 (67%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 ++ + L+ NI L++ YRG RH++ LPVRGQRTHTNA+T KK Sbjct: 49 FKQDRVLKEFDKKNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKK 97 >gi|327186889|gb|AEA30849.1| hypothetical protein [Solanum cardiophyllum] Length = 68 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62 >gi|301139328|gb|ADK66079.1| COSII_At5g14320 [Solanum dolichocremastrum] Length = 75 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILGDLQM-ENKVMKD 75 >gi|222433587|gb|ACM51138.1| ribosomal protein S18 [Tetranychus cinnabarinus] Length = 87 Score = 60.3 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 22/87 (25%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------VEGDL 70 +C K + +R +L E EV ++ + Q L Sbjct: 1 VCKKADVDLNKRAGELTEEEVEKLVTIMSNPRQYKIPLWFLNRQRDIKDGKYSQVTSNSL 60 Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLP 97 + +++RL + +RGLRH GL Sbjct: 61 ETKIRDDLERLKKIKAHRGLRHFWGLR 87 >gi|67968820|dbj|BAE00767.1| unnamed protein product [Macaca fascicularis] Length = 82 Score = 60.3 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R GV++K+ Sbjct: 33 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGCTV---GVSKKK 82 >gi|301139394|gb|ADK66112.1| COSII_At5g14320 [Solanum humectophilum] Length = 77 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|301139204|gb|ADK66017.1| COSII_At5g14320 [Solanum buesii] Length = 77 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|327187145|gb|AEA30977.1| hypothetical protein [Solanum violaceimarmoratum] Length = 68 Score = 59.9 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG +++ I L Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDL 62 >gi|327187075|gb|AEA30942.1| hypothetical protein [Solanum schenckii] Length = 73 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P +RV +L YIHGIG +++ I L + + + + Sbjct: 27 VRVGGVEVPNNERVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73 >gi|301139496|gb|ADK66163.1| COSII_At5g14320 [Solanum pascoense] Length = 77 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77 >gi|313509202|gb|ADR65911.1| hypothetical protein [Solanum buesii] gi|313509204|gb|ADR65912.1| hypothetical protein [Solanum buesii] Length = 78 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|301139258|gb|ADK66044.1| COSII_At5g14320 [Solanum chomatophilum] Length = 61 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 15 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 61 >gi|301139214|gb|ADK66022.1| COSII_At5g14320 [Solanum chomatophilum] Length = 71 Score = 59.5 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 25 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 71 >gi|301139338|gb|ADK66084.1| COSII_At5g14320 [Solanum dolichocremastrum] Length = 77 Score = 59.5 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77 >gi|313509286|gb|ADR65953.1| hypothetical protein [Solanum limbaniense] Length = 78 Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KR +L YIHGIG ++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRXEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 78 >gi|301139568|gb|ADK66199.1| COSII_At5g14320 [Solanum solisii] Length = 77 Score = 59.1 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHG G S++ I L + + + + Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGXGRTSARQILVXLQM-ENKVMKDMS 77 >gi|313509354|gb|ADR65987.1| hypothetical protein [Solanum sucubunense] Length = 78 Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG S++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQIPVDLQM-ENKVMKDMS 78 >gi|125599287|gb|EAZ38863.1| hypothetical protein OsJ_23280 [Oryza sativa Japonica Group] Length = 78 Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 V L + +++RL + +RGLRH GL RGQ T T R K GV++KR Sbjct: 25 VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRDRGQHTKTTGRRGKTV---GVSKKR 78 >gi|327186863|gb|AEA30836.1| hypothetical protein [Solanum berthaultii] Length = 58 Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 14 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 58 >gi|327186873|gb|AEA30841.1| hypothetical protein [Solanum chomatophilum] Length = 57 Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG S++ I L Sbjct: 16 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 51 >gi|313509414|gb|ADR66017.1| hypothetical protein [Solanum violaceimarmoratum] Length = 78 Score = 58.7 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49 R+ GV +P KRV +L YIHGIG +++ I L + + + + Sbjct: 32 VRVGGVEVPNNKRVGFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78 >gi|297292320|ref|XP_002804062.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta] Length = 82 Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T R + GV++K+ Sbjct: 33 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHAKTTGRCGRTV---GVSKKK 82 >gi|11467079|ref|NP_042555.1| ribosomal protein S13 [Acanthamoeba castellanii] gi|1173315|sp|P46760|RT13_ACACA RecName: Full=Ribosomal protein S13, mitochondrial gi|562060|gb|AAD11848.1| ribosomal protein S13 [Acanthamoeba castellanii] Length = 119 Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70 + K + AL IHG+ K + + + +V + I++ Y +E + Sbjct: 15 KNKNIFSALKDIHGVNLKKINKMGLVMGLDKFEKVSSMNFELFSLIKKQAIFFYNLEENK 74 Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109 K++ + Y G+RH LPVRGQRTHTNA+T Sbjct: 75 IFNNVNKKKKIKN---YTGMRHILKLPVRGQRTHTNAKT 110 >gi|327186995|gb|AEA30902.1| hypothetical protein [Solanum iopetalum] Length = 60 Score = 58.4 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 22/36 (61%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG +++ I L Sbjct: 17 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDL 52 >gi|218117290|emb|CAQ37772.1| 40S ribosomal protein S18 [Echinorhynchus truttae] Length = 62 Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 21/49 (42%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 + AL I GIG + S K I +R +L + EV ++ I Sbjct: 1 MPFALTAIKGIGLRFSHVAVAKAGIDVTKRAGELSDEEVERVIDVILNP 49 >gi|47570246|ref|ZP_00240897.1| 30S ribosomal protein s13 [Bacillus cereus G9241] gi|47553070|gb|EAL11470.1| 30S ribosomal protein s13 [Bacillus cereus G9241] Length = 30 Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/29 (65%), Positives = 23/29 (79%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKS 29 MARIAGV+IPR KRVV +L Y+ GIG + Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRTT 29 >gi|75764943|ref|ZP_00744281.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74487567|gb|EAO51445.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 30 Score = 57.2 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 19/28 (67%), Positives = 22/28 (78%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFK 28 MARIAGV+IPR KRVV +L Y+ GIG Sbjct: 1 MARIAGVDIPRDKRVVISLTYVFGIGRT 28 >gi|301139516|gb|ADK66173.1| COSII_At5g14320 [Solanum paucissectum] Length = 68 Score = 56.8 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV +L YIHGIG ++ I L Sbjct: 22 VRVGGVEVPNNKRVEFSLQYIHGIGRTRARQILVDL 57 >gi|66771207|gb|AAY54915.1| IP07925p [Drosophila melanogaster] Length = 246 Score = 56.8 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I G+G + S + K + +R + E EV ++ I Q Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQ 44 >gi|76162952|gb|AAX30684.2| SJCHGC06893 protein [Schistosoma japonicum] Length = 62 Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%) Query: 77 NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +++RL + +RG+RH GL VRGQ T T R + GV+RK+ Sbjct: 20 DLERLKRMRSHRGIRHYWGLRVRGQHTKTTGRRGRTV---GVSRKK 62 >gi|157929908|gb|ABW04142.1| ribosomal protein S18 [Epinephelus coioides] Length = 50 Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 1 LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 50 >gi|158187838|gb|ABW23208.1| ribosomal protein rps18 [Eurythoe complanata] Length = 55 Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH G+ VRGQ T T R + GV++K+ Sbjct: 6 LDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTV---GVSKKK 55 >gi|326559176|gb|ADZ95627.1| 40S ribosomal protein S18 [Nosema bombycis] gi|326559178|gb|ADZ95628.1| 40S ribosomal protein S18 [Nosema bombycis] Length = 115 Score = 56.0 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 22/103 (21%) Query: 28 KSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE----------------GDLR 71 + S IC + + RR +L E+ +I+ AI V Sbjct: 2 RMSTAICKRTGVGLTRRAGELSNEELEKIQNAILDPKSVGIPVEFFNYRRNPVDGTDTHL 61 Query: 72 RTVAMNIKRLMDLGCYRGLRHRR------GLPVRGQRTHTNAR 108 + ++ + + L + +RH R GL V GQR+ +N R Sbjct: 62 VSTKLDAEYRLMLERGKKIRHVRLCRIACGLKVHGQRSKSNGR 104 >gi|327186849|gb|AEA30829.1| hypothetical protein [Solanum albicans] Length = 54 Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR 44 R+ GV +P KRV +L YIHGIG +++ I L + + + Sbjct: 11 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQMENKVK 53 >gi|240276443|gb|EER39955.1| ribosomal protein S13p/S18e [Ajellomyces capsulatus H143] Length = 51 Score = 55.7 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + + +++RL + +RGLRH GL VRGQ T T R + GV++K+ Sbjct: 1 MESKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 50 >gi|143450|gb|AAA22706.1| ribosomal protein S13 [Bacillus subtilis] Length = 36 Score = 55.3 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 21/36 (58%), Positives = 26/36 (72%) Query: 87 YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 YRG+RHRRGLPVRGQ + NARTRK + +K+ Sbjct: 1 YRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 36 >gi|301139230|gb|ADK66030.1| COSII_At5g14320 [Solanum chomatophilum] Length = 49 Score = 54.9 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 19/29 (65%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSS 30 R+ GV +P KRV +L YIHGIG S+ Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSA 49 >gi|329905506|ref|ZP_08274145.1| hypothetical protein IMCC9480_2537 [Oxalobacteraceae bacterium IMCC9480] gi|327547574|gb|EGF32375.1| hypothetical protein IMCC9480_2537 [Oxalobacteraceae bacterium IMCC9480] Length = 30 Score = 54.5 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 19/30 (63%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSS 30 MARIAGVNIP + V L I+G+G + Sbjct: 1 MARIAGVNIPNHQHTVIGLTAIYGVGRPRA 30 >gi|70938520|ref|XP_739923.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56517276|emb|CAH87495.1| hypothetical protein PC302493.00.0 [Plasmodium chabaudi chabaudi] Length = 50 Score = 54.5 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Query: 74 VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +++R+ + +RGLRH GL VRGQ T T R + GVA+K+ Sbjct: 3 LREDLERMKKIRLHRGLRHHWGLRVRGQHTKTTGRRGRTV---GVAKKK 48 >gi|293343231|ref|XP_002725424.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus] Length = 61 Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 69 DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +L + +++RL + +RGLRH GL VRG+ T T R + GV++K+ Sbjct: 11 NLDNKLHEDLERLKKIRAHRGLRHFWGLRVRGRHTKTTGRRGRTV---GVSKKK 61 >gi|23464609|ref|NP_696977.1| ribosomal protein S13 [Monosiga brevicollis ATCC 50154] gi|23344072|gb|AAN28348.1| ribosomal protein S13 [Monosiga brevicollis] Length = 166 Score = 54.1 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 49/151 (32%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--------------------- 57 L I G+G +IC L I P +L E + ++ Sbjct: 16 LLKIKGLGKFKIFNICQILGINPNIEYSKLSEHYIDELNLLLANIKKQDYNSILENVNID 75 Query: 58 --------QAIEQDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRG 89 + I+++ +E +L + I L+ + RG Sbjct: 76 NTNTRINNKNIDKNKLNLYLFNKNSTFNKSTKNIVLIEENLNDYESSQINTLIQINALRG 135 Query: 90 LRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120 R + G P +GQRT +NA T K+ K + + Sbjct: 136 RRIKMGYPSKGQRTRSNAITAKRINKRLIKK 166 >gi|224062852|ref|XP_002300902.1| predicted protein [Populus trichocarpa] gi|222842628|gb|EEE80175.1| predicted protein [Populus trichocarpa] Length = 126 Score = 53.7 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 25/107 (23%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQ- 65 + AL I GIG + + +C K + +R H + + + + Q Sbjct: 1 MFALTSIKGIGRRFANIVCKKADVDMNKRSHSPSLSVLFWLVNYPQQSNLMTIVANPCQF 60 Query: 66 -------------VEGDLRRTVA--MNIKRLMDLGCYRGLRHRRGLP 97 +G + V+ +++K DL C + +R P Sbjct: 61 KIPDWFLNRQKDYTDGKYSQVVSNALDMKLRDDLECLKKIRQELDFP 107 >gi|70909573|emb|CAJ17223.1| ribosomal protein S18e [Eucinetus sp. APV-2005] Length = 49 Score = 53.7 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%) Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +++R+ + +RG+RH GL VRGQ T T R + GV++K+ Sbjct: 3 KLREDLERMKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 49 >gi|10242302|gb|AAG15373.1| ribosomal protein S18 [Anopheles gambiae] Length = 46 Score = 53.4 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Query: 74 VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 + +++RL + +RG+RH GL VRGQ T T R + GV++K+ Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 46 >gi|88799197|ref|ZP_01114777.1| 30S ribosomal protein S13 [Reinekea sp. MED297] gi|88778180|gb|EAR09375.1| 30S ribosomal protein S13 [Reinekea sp. MED297] Length = 35 Score = 52.2 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 22/33 (66%), Positives = 23/33 (69%) Query: 85 GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117 G YRG+RHRR LPVRGQ T NARTRK K Sbjct: 1 GLYRGIRHRRNLPVRGQNTKNNARTRKGPKKPI 33 >gi|300174376|gb|ADJ68156.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174378|gb|ADJ68157.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174380|gb|ADJ68158.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174382|gb|ADJ68159.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174384|gb|ADJ68160.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174386|gb|ADJ68161.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174388|gb|ADJ68162.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174390|gb|ADJ68163.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174392|gb|ADJ68164.1| putative RpS18 protein [Cecidostiba fungosa] gi|300174394|gb|ADJ68165.1| putative RpS18 protein [Caenacis lauta] Length = 85 Score = 51.8 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 22/85 (25%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------------- 65 I G+G + + + K I ++R + E EV +I + Q Sbjct: 1 IKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVD 60 Query: 66 ------VEGDLRRTVAMNIKRLMDL 84 +L + +++R+ + Sbjct: 61 GKYSQLTSSNLDSKLREDLERMKKI 85 >gi|114612284|ref|XP_001153245.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes] gi|114612286|ref|XP_527678.2| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes] Length = 89 Score = 51.4 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 70 LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + ++GLRH GL V+GQ T T G GV +K+ Sbjct: 41 LDNKLHEDLERLKKIQVHKGLRHFWGLCVQGQHTKTTGCR----GHVGVTKKK 89 >gi|327187031|gb|AEA30920.1| hypothetical protein [Solanum iopetalum] Length = 52 Score = 50.7 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 21/36 (58%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 R+ GV +P KRV L +IHGIG +++ I L Sbjct: 9 VRVGGVEVPNNKRVEFYLQHIHGIGRTAARQILVDL 44 >gi|302839950|ref|XP_002951531.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f. nagariensis] gi|300263140|gb|EFJ47342.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f. nagariensis] Length = 81 Score = 49.9 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI 39 R+ N+ +++ A+ I GIG + + +C K + Sbjct: 15 RLLNTNVDGKNKIMYAMTAIKGIGRRFPKQVCKKAEV 51 >gi|149506329|ref|XP_001515057.1| PREDICTED: similar to ribosomal protein s18, putative, partial [Ornithorhynchus anatinus] Length = 50 Score = 49.5 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%) Query: 1 MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37 + RI N+ ++VV AL I GIG + + +C + Sbjct: 14 ILRILNTNVKGHEKVVIALTAIRGIGRRMATVVCKEA 50 >gi|1086185|pir||S51064 ribosomal protein S13 - Thermus aquaticus (fragment) Length = 24 Score = 48.0 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/24 (75%), Positives = 19/24 (79%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGI 25 ARIAGV IPR KRV AL YI+GI Sbjct: 1 ARIAGVEIPRNKRVDVALTYIYGI 24 >gi|160948222|emb|CAO94712.1| putative ribosomal protein S18 [Pomphorhynchus laevis] Length = 78 Score = 48.0 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 L + +++RL + +RGLRH VRGQ T + R + GV++ + Sbjct: 25 TSNVLDVRLREDLERLKKMRVHRGLRHYWNTRVRGQHTRNSGRRGRTV---GVSKTK 78 >gi|7525003|ref|NP_050101.1| ribosomal protein S13 [Dictyostelium discoideum] gi|74833664|sp|O21038|RT13_DICDI RecName: Full=Ribosomal protein S13, mitochondrial gi|2627258|dbj|BAA23575.1| ribosomal protein S13 [Dictyostelium discoideum] gi|4958906|dbj|BAA78083.1| ribosomal protein S13 [Dictyostelium discoideum] Length = 169 Score = 47.6 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 3/120 (2%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I + + K+++ L I G+ F +Q + + ++L++SE QI +++ Sbjct: 5 IGKIELNNEKQIIGELKKKIKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVDILQR 64 Query: 63 DYQVEGDLRRTVAMNIKRLMDL-GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121 + + ++ + YR +R R+G PVRG RT +NA T K+ K Sbjct: 65 FKGLYSHNYGLKEEALAKIRRIENVYRYIRVRQGYPVRG-RTKSNANTVKRQRNVSTGVK 123 >gi|8928596|ref|NP_059401.1| ribosomal protein S13 [Paramecium aurelia] Length = 244 Score = 47.2 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 20/33 (60%) Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 A NI + YR RH +GLP RGQRT +NA Sbjct: 81 AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNA 113 >gi|141013|sp|P15609|YM08_PARTE RecName: Full=Uncharacterized mitochondrial protein ORF8 gi|578757|emb|CAA34049.1| unnamed protein product [Paramecium aurelia] Length = 241 Score = 47.2 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 20/33 (60%) Query: 75 AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 A NI + YR RH +GLP RGQRT +NA Sbjct: 78 AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNA 110 >gi|3024756|sp|O05207|TOP6B_SULSH RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|167745001|pdb|2ZBK|B Chain B, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745003|pdb|2ZBK|D Chain D, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745005|pdb|2ZBK|F Chain F, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745007|pdb|2ZBK|H Chain H, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|1926403|emb|CAA71604.1| type II DNA topoisomerase subunit B [Sulfolobus shibatae B12] Length = 530 Score = 47.2 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 IG ++ I + P ++V L E E+ ++ + ++D Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKD 303 >gi|156042836|ref|XP_001587975.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980] gi|154695602|gb|EDN95340.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980 UF-70] Length = 37 Score = 46.8 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/32 (53%), Positives = 19/32 (59%) Query: 84 LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115 +G YRG RH GLPVRGQ T T +K K Sbjct: 1 MGSYRGRRHAMGLPVRGQNTKGQISTARKLNK 32 >gi|297794287|ref|XP_002865028.1| hypothetical protein ARALYDRAFT_920003 [Arabidopsis lyrata subsp. lyrata] gi|297310863|gb|EFH41287.1| hypothetical protein ARALYDRAFT_920003 [Arabidopsis lyrata subsp. lyrata] Length = 57 Score = 46.8 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGI 25 AR+ GV IP KR+ +L YIHGI Sbjct: 33 ARVGGVEIPVNKRIEYSLQYIHGI 56 >gi|302835644|ref|XP_002949383.1| mitochondrial ribosomal protein S13 [Volvox carteri f. nagariensis] gi|300265210|gb|EFJ49402.1| mitochondrial ribosomal protein S13 [Volvox carteri f. nagariensis] Length = 195 Score = 46.0 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%) Query: 35 NKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94 I + +V + E+ + ++ IE ++ LRR + N+ + + RG+ H + Sbjct: 115 EACGISKDLKVKDIKETYLQKVASYIEANFVTGDALRRQIRENVAAEVAINSQRGMHHMQ 174 >gi|299830268|ref|YP_003734432.1| ribosomal protein S13 [Paramecium caudatum] gi|299507827|emb|CAZ66811.1| ribosomal protein S13 [Paramecium caudatum] Length = 244 Score = 46.0 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 21/36 (58%) Query: 87 YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 Y+G RH +GLP RGQRT +NA + K K+ Sbjct: 93 YKGWRHFKGLPCRGQRTWSNAWSSYKSNLVLRDYKK 128 >gi|28373795|pdb|1MU5|A Chain A, Structure Of Topoisomerase Subunit Length = 471 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 266 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 303 >gi|71042168|pdb|1Z5A|A Chain A, Topoisomerase Vi-B, Adp-Bound Dimer Form gi|71042169|pdb|1Z5A|B Chain B, Topoisomerase Vi-B, Adp-Bound Dimer Form gi|71042170|pdb|1Z5B|A Chain A, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form gi|71042171|pdb|1Z5B|B Chain B, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form gi|114794402|pdb|2HKJ|A Chain A, Topoisomerase Vi-B Bound To Radicicol Length = 469 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 264 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 301 >gi|227827528|ref|YP_002829308.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.14.25] gi|227830215|ref|YP_002831995.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus L.S.2.15] gi|229579030|ref|YP_002837428.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.G.57.14] gi|229584731|ref|YP_002843233.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.27] gi|238619685|ref|YP_002914511.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.4] gi|284997638|ref|YP_003419405.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5] gi|259533989|sp|C3N5B3|TOP6B_SULIA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533992|sp|C4KGX9|TOP6B_SULIK RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533995|sp|C3MPN7|TOP6B_SULIL RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533998|sp|C3MYN1|TOP6B_SULIM RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259534004|sp|C3NDW7|TOP6B_SULIY RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|227456663|gb|ACP35350.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.S.2.15] gi|227459324|gb|ACP38010.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.14.25] gi|228009744|gb|ACP45506.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.G.57.14] gi|228019781|gb|ACP55188.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.27] gi|238380755|gb|ACR41843.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.4] gi|284445533|gb|ADB87035.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5] gi|323474579|gb|ADX85185.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus REY15A] gi|323477311|gb|ADX82549.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus HVE10/4] Length = 530 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 302 >gi|229582219|ref|YP_002840618.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.N.15.51] gi|259534001|sp|C3NHT6|TOP6B_SULIN RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|228012935|gb|ACP48696.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.N.15.51] Length = 530 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 302 >gi|71042167|pdb|1Z59|A Chain A, Topoisomerase Vi-B, Adp-Bound Monomer Form gi|71042172|pdb|1Z5C|A Chain A, Topoisomerase Vi-B, Adp Pi Bound Dimer Form gi|71042173|pdb|1Z5C|B Chain B, Topoisomerase Vi-B, Adp Pi Bound Dimer Form Length = 469 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 264 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 301 >gi|28373805|pdb|1MX0|A Chain A, Structure Of Topoisomerase Subunit gi|28373806|pdb|1MX0|B Chain B, Structure Of Topoisomerase Subunit gi|28373807|pdb|1MX0|C Chain C, Structure Of Topoisomerase Subunit gi|28373808|pdb|1MX0|D Chain D, Structure Of Topoisomerase Subunit gi|28373809|pdb|1MX0|E Chain E, Structure Of Topoisomerase Subunit gi|28373810|pdb|1MX0|F Chain F, Structure Of Topoisomerase Subunit Length = 472 Score = 45.6 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + P ++V L E E+ ++ + ++ Sbjct: 267 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 304 >gi|11466475|ref|NP_038178.1| ribosomal protein S13 [Chrysodidymus synuroideus] gi|7110472|gb|AAF36944.1|AF222718_18 ribosomal protein S13 [Chrysodidymus synuroideus] Length = 112 Score = 45.3 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Query: 79 KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GKGGVARK 121 + Y+ R+ G P+RGQRTHTNA+T+KKF K ++K Sbjct: 62 NFFYKIKNYKNFRNLLGYPIRGQRTHTNAKTKKKFKFSPKNKYTFSKK 109 >gi|87043036|ref|YP_492650.1| ribosomal protein S13 [Dictyostelium citrinum] gi|122000099|sp|Q2LCP2|RT13_DICCI RecName: Full=Ribosomal protein S13, mitochondrial gi|84682136|gb|ABC60401.1| ribosomal protein S13 [Dictyostelium citrinum] Length = 170 Score = 45.3 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 7/122 (5%) Query: 4 IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I + + K+++ L I GI +Q + + + L++S+ QI + ++ Sbjct: 5 IGKIELNSEKQIIGELKKKIKGINLNVAQKVIMLSGNVASLKGNTLLKSQEKQILEILQS 64 Query: 63 D---YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119 Y L+ I+RL ++ YR +R +G P++G RT +NA T K+ G Sbjct: 65 FKGLYDYTYGLKVEALDKIRRLENV--YRYIRVIKGYPIKG-RTKSNANTAKRQASPGGN 121 Query: 120 RK 121 +K Sbjct: 122 KK 123 >gi|315427275|dbj|BAJ48887.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 628 Score = 44.9 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 ++ VV AL G+G K ++++ + + +RV QL + EV ++ Sbjct: 167 DLNPKTGVVVALARDLGLGGKFAEELVARAGLDKNKRVEQLSDEEVNRLNTV 218 >gi|269986392|gb|EEZ92683.1| 30S ribosomal protein S13P [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 101 Score = 44.5 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 64 YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT---NARTRKKFGKGGVAR 120 + + +LR M I+++ Y+G RH +RGQ+ + N R G V + Sbjct: 33 HLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKLRGQKVRSRGANVHGRVGSSLGVVRK 92 Query: 121 K 121 K Sbjct: 93 K 93 >gi|225680884|gb|EEH19168.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb03] Length = 105 Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYR 88 + + ++ L +++ + A+ + ++E DLRR + +I+RL D+G R Sbjct: 1 MARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQILDDIQRLKDIGTVR 54 >gi|301500879|ref|YP_003795291.1| ribosomal protein S13 [Chromera velia] gi|300069425|gb|ADJ66533.1| ribosomal protein S13 [Chromera velia] Length = 123 Score = 44.5 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 53 VIQIRQAIEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR-TR 110 + +I + + + ++ + R +I+ L + R LR +GLPVRGQ+T N R TR Sbjct: 59 LKRISRVLRKINFCLRDKWRLAQKKHIQYLKETRLIRILRSEKGLPVRGQKTKNNHRTTR 118 Query: 111 KKFG 114 KK Sbjct: 119 KKLN 122 >gi|15897847|ref|NP_342452.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus P2] gi|284175656|ref|ZP_06389625.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus 98/2] gi|21264094|sp|Q97ZF0|TOP6B_SULSO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|13814150|gb|AAK41242.1| DNA topoisomerase VI subunit B (top6B) [Sulfolobus solfataricus P2] gi|261602555|gb|ACX92158.1| DNA topoisomerase VI, B subunit [Sulfolobus solfataricus 98/2] Length = 530 Score = 44.1 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I + + P ++V L E E+ ++ + ++ Sbjct: 265 IGDTTADKILELVGLRPNKKVKNLTEEEITRLVETFKK 302 >gi|302531490|ref|ZP_07283832.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] gi|302440385|gb|EFL12201.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4] Length = 286 Score = 43.7 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%) Query: 14 RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD- 69 R+ AL I GIG S +I ++ + P V +L E + + +AI + VE D Sbjct: 160 RLKWALTDQSLIAGIGNAYSDEIMHRAKLSPYATVGKLDEGALEVLAEAIRE---VETDA 216 Query: 70 LRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 + R+V RL GLR H R GLP Sbjct: 217 VSRSVGQKAARLKGEKR-SGLRVHARTGLPC 246 >gi|147921120|ref|YP_685069.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] gi|56295548|emb|CAH04791.1| formamidopyrimidine-DNA glycosylase [uncultured archaeon] gi|110620465|emb|CAJ35743.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic archaeon RC-I] Length = 269 Score = 43.7 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 25/44 (56%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I GIG +QDI + P+R+V QL + E+ ++ ++I + Sbjct: 167 IAGIGNVYAQDILFTARLHPDRKVRQLSDDEIERLFKSIIGNLH 210 >gi|284047823|ref|YP_003398162.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] gi|283952044|gb|ADB46847.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM 20731] Length = 273 Score = 43.7 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLRRTVAMN 77 I G+G + + I P RRV++L E + R I Q + G R Sbjct: 168 IAGLGNIYADEALFAAGIRPTRRVNRLTRKEWEALTLGVRAVIHQGLEHHGTTFRNYQDA 227 Query: 78 IKRLMDLGCYRGLRHRRGLPVR 99 ++ D Y + HR+GLP R Sbjct: 228 DGKMGDNSRYLQVYHRKGLPCR 249 >gi|146304517|ref|YP_001191833.1| DNA topoisomerase VI subunit B [Metallosphaera sedula DSM 5348] gi|259533984|sp|A4YHK7|TOP6B_METS5 RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|145702767|gb|ABP95909.1| DNA topoisomerase VI, B subunit [Metallosphaera sedula DSM 5348] Length = 531 Score = 43.3 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 22/38 (57%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 +G K++ + + P++RV +L + ++ ++ A++ Sbjct: 265 VGEKTALSVIEMAGLDPDKRVQKLTDDQLSKLVDAMKN 302 >gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 277 Score = 43.0 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 I GIG + +I + + PE R ++L +++ IR + + +V Sbjct: 182 IAGIGNWMADEILYRARVHPETRANELSSTQLEAIRFRVTEVVKV 226 >gi|50365398|ref|YP_053823.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] gi|50363954|gb|AAT75939.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1] Length = 275 Score = 42.6 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG + +I I PER L + E+ +I Sbjct: 172 GIGNIYANEILFAAGINPERITKTLTDEELKKI 204 >gi|256811227|ref|YP_003128596.1| Fibronectin-binding A domain protein [Methanocaldococcus fervens AG86] gi|256794427|gb|ACV25096.1| Fibronectin-binding A domain protein [Methanocaldococcus fervens AG86] Length = 671 Score = 42.2 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG +++IC + I ++ L E E+ + Sbjct: 197 IFGIGGLYAEEICERAGID--KKKKDLNEDEIKNL 229 >gi|123507646|ref|XP_001329464.1| 30S ribosomal protein S13P [Trichomonas vaginalis G3] gi|121912419|gb|EAY17241.1| 30S ribosomal protein S13P, putative [Trichomonas vaginalis G3] Length = 71 Score = 42.2 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116 R + + V DL + I+ + + RG+RH GL V GQ T + R G Sbjct: 8 RATGQNTHWVATDLGANIHAEIEHMKKMRMKRGIRHGLGLKVCGQCTKSIGRRG---GAL 64 Query: 117 GVARKR 122 GV RK+ Sbjct: 65 GVERKK 70 >gi|60117130|ref|YP_209593.1| ribosomal protein S13 [Polysphondylium pallidum] gi|51339694|gb|AAU00608.1| ribosomal protein S13 [Polysphondylium pallidum] Length = 148 Score = 42.2 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%) Query: 1 MARIAGVNIPRAKRVVRALCYIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 M I I K+ V I G + + +C+ + P ++L + +++ Sbjct: 1 MVIILDQIILNEKKKVI--QEIKKEVPGFNYTLAAKLCSLCGLLPNTYGYKLSTNLSLKL 58 Query: 57 RQAIEQDYQVEGDLR---RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + I Q Y+ D N R D YR LR+++G PV QRT +NA+T K Sbjct: 59 MR-IFQTYKGLYDFSFFSYKKMFNTLRNKD-KAYRNLRYKKGYPVN-QRTRSNAKTAAK 114 >gi|218884530|ref|YP_002428912.1| DNA topoisomerase VI subunit B [Desulfurococcus kamchatkensis 1221n] gi|218766146|gb|ACL11545.1| Type 2 DNA topoisomerase VI subunit B [Desulfurococcus kamchatkensis 1221n] Length = 530 Score = 42.2 bits (99), Expect = 0.026, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 6 GVNIPRAKRVVRALCY-------IHG---IGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 GV++ K+++ + Y I G IG +++ I + I P + + +L ++E++ Sbjct: 237 GVDLELLKQIISSHNYTSVEELLIKGFQSIGEATAKSILQQAGIDPGKPISELSDNELLS 296 Query: 56 IRQAI 60 + + Sbjct: 297 LVNTL 301 >gi|296242525|ref|YP_003650012.1| DNA topoisomerase VI subunit B [Thermosphaera aggregans DSM 11486] gi|296095109|gb|ADG91060.1| DNA topoisomerase VI, B subunit [Thermosphaera aggregans DSM 11486] Length = 532 Score = 41.4 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 20/36 (55%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +G ++ ++ N+ + P + L E E+++I AI Sbjct: 268 VGESTATEVLNRAGVDPSKPAGSLGEDELLRIVNAI 303 >gi|261884953|ref|ZP_06008992.1| hypothetical protein CfetvA_06945 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 29 Score = 41.4 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 20/27 (74%), Positives = 22/27 (81%) Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLR 91 VEGDL +VAM+IK LMDLG YRGLR Sbjct: 1 MVEGDLTESVAMDIKALMDLGSYRGLR 27 >gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87] Length = 263 Score = 40.6 bits (95), Expect = 0.065, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73 I GIG + ++ + I P+ +V+ L + ++ I IE+ +V + R Sbjct: 163 IAGIGNMYADEVLFQTKIHPKTKVNTLSQKQLKSIFDKIEEVLKVVKEARIE 214 >gi|15921560|ref|NP_377229.1| DNA topoisomerase VI subunit B [Sulfolobus tokodaii str. 7] gi|28380202|sp|Q971T2|TOP6B_SULTO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|15622346|dbj|BAB66338.1| 532aa long hypothetical type II DNA topoisomerase VI subunit B [Sulfolobus tokodaii str. 7] Length = 532 Score = 40.6 bits (95), Expect = 0.069, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 21/38 (55%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ I +P +++ +L + E+ ++ + +++ Sbjct: 264 IGDVTADKILEMAKLPKDKKTTELTDEEISRLVEVMKK 301 >gi|330834338|ref|YP_004409066.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4] gi|329566477|gb|AEB94582.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4] Length = 531 Score = 40.3 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 23/38 (60%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 +G K++ ++ + P+++V +L + ++ ++ A++ Sbjct: 265 VGEKTALNVIEMAGLDPDKKVQKLPDDQLSKLVDAMKN 302 >gi|72014940|ref|XP_781179.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115935269|ref|XP_001182501.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 429 Score = 40.3 bits (94), Expect = 0.086, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%) Query: 21 YIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTV 74 ++GIG + I + PE ++ L + + A + QD + DL T+ Sbjct: 302 SVNGIGTARAIAKVYGILAAGGVDPETKLKLLSKERIDAFMNASTVTQDEVLGFDLSHTL 361 Query: 75 AMNIKRLMDLGCYRGLRH 92 M + + G G H Sbjct: 362 GMVTTKYVMNGSVMGFGH 379 >gi|239945857|ref|ZP_04697794.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|239992325|ref|ZP_04712989.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 11379] gi|291449313|ref|ZP_06588703.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] gi|291352260|gb|EFE79164.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL 15998] Length = 286 Score = 40.3 bits (94), Expect = 0.089, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI--------RQAIEQDYQVE-GDLRR 72 I GIG S +I + + P +R L E +V ++ R A+++ VE G L+ Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLTEDDVTRLYTALRTTVRDAVDRSSGVEAGKLKA 230 Query: 73 TVA 75 Sbjct: 231 EKK 233 >gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens] Length = 268 Score = 40.3 bits (94), Expect = 0.090, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69 GIG ++ + I PE+ V+ L E +V + IR+ +++ V+GD Sbjct: 184 GIGNWVGDEVLFQAKIHPEQSVNSLTEEQVAKLHTAIREVLDKAVSVDGD 233 >gi|15669822|ref|NP_248636.1| hypothetical protein MJ_1625 [Methanocaldococcus jannaschii DSM 2661] gi|42559938|sp|Q59020|Y1625_METJA RecName: Full=Uncharacterized protein MJ1625 gi|1592339|gb|AAB99643.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 671 Score = 40.3 bits (94), Expect = 0.091, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + GIG +++IC + I ++R L E E+ ++ Sbjct: 197 VFGIGGLYAEEICERAEIDKKKR--DLSEEEIKKL 229 >gi|296169701|ref|ZP_06851319.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895698|gb|EFG75394.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 287 Score = 40.3 bits (94), Expect = 0.092, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L + ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLTDEQLTTLHDAMVS--VLRDAVSRSVGQGAATL 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM 12042] Length = 306 Score = 40.3 bits (94), Expect = 0.093, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 GIG + +IC L I P +R QL ++++ + + Q Sbjct: 167 GIGNIYANEICFALRIDPRKRCDQLTKAQITALPEITRQ 205 >gi|227890803|ref|ZP_04008608.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius ATCC 11741] gi|227867212|gb|EEJ74633.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius ATCC 11741] Length = 824 Score = 40.3 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 12/73 (16%) Query: 7 VNIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVI 54 + +P K V A L GIG K+++ I KL I + + L E + Sbjct: 90 IELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGIDAIDVLNNDMDKLEELGLSEKQKD 149 Query: 55 QIRQAIEQDYQVE 67 I++ ++++Y ++ Sbjct: 150 SIKKVLKENYGID 162 >gi|297155165|gb|ADI04877.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 288 Score = 39.9 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 8/58 (13%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 RI GV R + V I GIG S +I + + P R L E EV ++ +A+ Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLAGDLTEEEVARLYEAM 211 >gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus tauri] Length = 683 Score = 39.9 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 19/32 (59%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 S +I + + PE R +++ +S++ IR+ I Sbjct: 101 RSTEILYRARVHPETRANEMTDSQLEAIRERI 132 >gi|212703530|ref|ZP_03311658.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] gi|212673030|gb|EEB33513.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098] Length = 286 Score = 39.9 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 5 AGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 G + + + AL + GIG + + + I P R +L E+E ++R A++ Sbjct: 161 LGPRLHGRRAIKAALLDQTVLAGIGNIYADESLFRAGIDPRRPAGELSEAEAERLRIALQ 220 Query: 62 Q 62 + Sbjct: 221 E 221 >gi|71732765|gb|AAZ40008.1| fibronectin binding protein [Clostridium difficile] gi|71732771|gb|AAZ40011.1| fibronectin binding protein [Clostridium difficile] gi|71732793|gb|AAZ40022.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 39.9 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + I + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGINQNTIIKDISDEQFDSL 68 >gi|320101389|ref|YP_004176981.1| DNA topoisomerase VI subunit B [Desulfurococcus mucosus DSM 2162] gi|319753741|gb|ADV65499.1| DNA topoisomerase VI, B subunit [Desulfurococcus mucosus DSM 2162] Length = 529 Score = 39.9 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 10/66 (15%) Query: 6 GVNIPRAKRVVRALCY-------IHG---IGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 GV++ K+++ + Y I G IG +++ I + + P + L E+E++ Sbjct: 236 GVDLELLKQIISSHNYSSVEELLIKGFQSIGEATARLILQQAGVDPAKPPVDLTENELLS 295 Query: 56 IRQAIE 61 + + Sbjct: 296 LVNTLR 301 >gi|160688761|gb|ABX45177.1| ribosomal protein S13 [Polysphondylium pallidum] Length = 144 Score = 39.9 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Query: 1 MARIAG-VNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVES---EVIQ 55 M I + + K++V + I G+ + + +C+ + P +L + ++++ Sbjct: 1 MVIILDQIILNEKKKIVNEIKKEIPGLSYTLATKLCSLCGLLPSITGIKLSTNLNLKLMR 60 Query: 56 IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 + Q + Y + + N++ YR LR+++G PV QRT +NA+T K Sbjct: 61 LFQTYKGLYDFNFFNYKKMFNNMRNKDQ--AYRNLRYKKGYPVN-QRTRSNAKTAAK 114 >gi|295835423|ref|ZP_06822356.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] gi|197696491|gb|EDY43424.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74] Length = 287 Score = 39.9 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G S +I + + P + +L E E ++ +A LR T+ + R Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETDRLYEA----------LRTTLTEAVTRSRG 223 Query: 84 LGCYR-GLRHRRGLPVRGQRT 103 + R + GL V G RT Sbjct: 224 IAAGRLKAEKKSGLRVHG-RT 243 >gi|255656572|ref|ZP_05401981.1| fibronectin-binding protein [Clostridium difficile QCD-23m63] gi|296449976|ref|ZP_06891740.1| fibronectin-binding protein [Clostridium difficile NAP08] gi|296878357|ref|ZP_06902365.1| fibronectin-binding protein [Clostridium difficile NAP07] gi|296261246|gb|EFH08077.1| fibronectin-binding protein [Clostridium difficile NAP08] gi|296430655|gb|EFH16494.1| fibronectin-binding protein [Clostridium difficile NAP07] Length = 591 Score = 39.9 bits (93), Expect = 0.13, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + I + + + + + Sbjct: 197 SIYSKFLGISPIIAKEICYRAGINQNTIIKDISDEQFDSL 236 >gi|164687811|ref|ZP_02211839.1| hypothetical protein CLOBAR_01455 [Clostridium bartlettii DSM 16795] gi|164603086|gb|EDQ96551.1| hypothetical protein CLOBAR_01455 [Clostridium bartlettii DSM 16795] Length = 595 Score = 39.5 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 GI +++IC + I + L ++ Q+ Y+ D+ V N Sbjct: 209 GISPTVAKEICYRAEIDFNVKAEDLSRDDLSQL-------YRTFSDIFTKVKNN 255 >gi|237725655|ref|ZP_04556136.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D4] gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4] Length = 276 Score = 39.5 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESE----VIQIRQAIEQDYQVE 67 I GIG S +I + I P + L + E V++IR+ I + Sbjct: 167 TVIAGIGNIYSDEILHAAGIYPGKYCSDLSDKEWNSLVVKIREIIRNSIETN 218 >gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc fallax KCTC 3537] Length = 275 Score = 39.5 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 21/41 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + ++ + I PE ++L S++ +R +I Sbjct: 167 TKIAGIGNIYADEVLWQSKIHPETPANELDPSQLAILRDSI 207 >gi|31789466|gb|AAP58579.1| putative fapy-DNA glycosylase [uncultured Acidobacteria bacterium] Length = 299 Score = 39.5 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V RAL GIG S +I + + P R+ L + E+ ++ Sbjct: 151 ENHTVKRALTDPHLFSGIGNAYSDEILHAAKMSPFRQTSSLTDEEIARL 199 >gi|284032237|ref|YP_003382168.1| hypothetical protein Kfla_4335 [Kribbella flavida DSM 17836] gi|283811530|gb|ADB33369.1| hypothetical protein Kfla_4335 [Kribbella flavida DSM 17836] Length = 104 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 RV L I G+G +Q I + I RRV L +++ + + Sbjct: 56 RVSALLQCIPGVGKVRAQQIMQRAGISETRRVRGLGSNQIAALMRE 101 >gi|71732785|gb|AAZ40018.1| fibronectin binding protein [Clostridium difficile] gi|71732787|gb|AAZ40019.1| fibronectin binding protein [Clostridium difficile] gi|71732795|gb|AAZ40023.1| fibronectin binding protein [Clostridium difficile] gi|71732797|gb|AAZ40024.1| fibronectin binding protein [Clostridium difficile] gi|71732799|gb|AAZ40025.1| fibronectin binding protein [Clostridium difficile] gi|71732801|gb|AAZ40026.1| fibronectin binding protein [Clostridium difficile] gi|71732803|gb|AAZ40027.1| fibronectin binding protein [Clostridium difficile] gi|71732805|gb|AAZ40028.1| fibronectin binding protein [Clostridium difficile] gi|71732815|gb|AAZ40033.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNTIIKDISDEQFDSL 68 >gi|326775044|ref|ZP_08234309.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] gi|326655377|gb|EGE40223.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus XylebKG-1] Length = 286 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I GIG S +I + + P +R L E +V ++ A+ Q Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLDEDDVTRLYTALRSTLQ 214 >gi|182434517|ref|YP_001822236.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463033|dbj|BAG17553.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 286 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I GIG S +I + + P +R L E +V ++ A+ Q Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLDEDDVTRLYTALRSTLQ 214 >gi|224062854|ref|XP_002300903.1| predicted protein [Populus trichocarpa] gi|222842629|gb|EEE80176.1| predicted protein [Populus trichocarpa] Length = 85 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Query: 87 YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122 +RGLRH GL VRGQ T R K GV++KR Sbjct: 54 HRGLRHYWGLIVRGQHTDYWPR-GKTV---GVSKKR 85 >gi|229495049|ref|ZP_04388795.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] gi|229317980|gb|EEN83855.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis SK121] Length = 288 Score = 39.5 bits (92), Expect = 0.17, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI + V ++L I GIG S +I + + P +L ++ + + Sbjct: 161 ARI------KNSIVDQSL--IAGIGNAYSDEILHTAKLSPFATSSRLTPDQISTLYAVMR 212 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 + + R+ + RL G+R H R GLP Sbjct: 213 S--TLADAIERSEGQDAARLKGEKR-SGMRVHARTGLPC 248 >gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans JJ] Length = 281 Score = 39.1 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 I GIG + + + I PE R + S ++ AI+ Sbjct: 174 TVIAGIGNIYADESLHAAGIHPETRAGDISPSRAEKLLAAIQ 215 >gi|312136934|ref|YP_004004271.1| fibronectin-binding a domain protein [Methanothermus fervidus DSM 2088] gi|311224653|gb|ADP77509.1| Fibronectin-binding A domain protein [Methanothermus fervidus DSM 2088] Length = 645 Score = 39.1 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 9 IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 + K VVR L ++G G +++I + I L ++E+ +I +IE+ Y Sbjct: 172 LNSDKDVVRTL-ALNGFGGTYAEEIVYRSGIDKNTPSKSLSDNEINKIYDSIEEIY 226 >gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Rubrobacter xylanophilus DSM 9941] Length = 286 Score = 39.1 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG + +I + P RR L E E ++ AI + + R Sbjct: 167 ISGIGNIYADEILYDARLSPRRRASSLSEEEWERLYAAIRSNLAAGIEHR 216 >gi|118619547|ref|YP_907879.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] gi|118571657|gb|ABL06408.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99] Length = 287 Score = 39.1 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L E ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAAKLSEEQLAALHDAVVS--VLTDAVSRSVGQGAATL 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|25026760|ref|NP_736814.1| putative transport protein [Corynebacterium efficiens YS-314] gi|259508103|ref|ZP_05751003.1| transport protein [Corynebacterium efficiens YS-314] gi|23492039|dbj|BAC17014.1| putative transport protein [Corynebacterium efficiens YS-314] gi|259164326|gb|EEW48880.1| transport protein [Corynebacterium efficiens YS-314] Length = 445 Score = 39.1 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLM-DLGCY 87 SS + L P+ R + E EV++I + E Q E ++ V RL+ ++ Sbjct: 159 SSNLLLRLLGFDPDARTEDMTEEEVVEIVTSFEGFEQGEREIVADVFEANDRLVTEI--- 215 Query: 88 RGLRHR 93 +RHR Sbjct: 216 --MRHR 219 >gi|71732763|gb|AAZ40007.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 39.1 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68 >gi|71732759|gb|AAZ40005.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 39.1 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68 >gi|284042578|ref|YP_003392918.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] gi|283946799|gb|ADB49543.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684] Length = 281 Score = 39.1 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 I GIG +I + + P +R L E E ++R A Sbjct: 166 IAGIGRSWVDEILWEARLSPFKRGRDLSEEEAERLRAA 203 >gi|262201295|ref|YP_003272503.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] gi|262084642|gb|ACY20610.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM 43247] Length = 295 Score = 39.1 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 7/78 (8%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY-QVEGDLRRTVAMNIKRLM 82 GIG S +I + + P L E +V + A+ G L +K Sbjct: 182 GIGNAYSDEILHTARLSPFATAKSLTEEQVSTLYDAMRSVLADATGRLEGQTVARLKSEK 241 Query: 83 DLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 242 RT----GLRVHARTGLPC 255 >gi|71732773|gb|AAZ40012.1| fibronectin binding protein [Clostridium difficile] gi|71732779|gb|AAZ40015.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 39.1 bits (91), Expect = 0.22, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68 >gi|297625311|ref|YP_003687074.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921076|emb|CBL55617.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 287 Score = 38.7 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I GIG S +I + + P + L + EV ++ AI Sbjct: 172 IAGIGNAYSDEILHDAKLSPFKPAANLTDDEVERLYAAIRD 212 >gi|301300083|ref|ZP_07206301.1| helicase, RecD/TraA family [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852315|gb|EFK79981.1| helicase, RecD/TraA family [Lactobacillus salivarius ACS-116-V-Col5a] Length = 824 Score = 38.7 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 12/72 (16%) Query: 8 NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVIQ 55 +P K V A L GIG K+++ I KL + + + L E + Sbjct: 91 ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVDAIDVLNNDMDKLEELGLSEKQKDS 150 Query: 56 IRQAIEQDYQVE 67 I++ ++++Y ++ Sbjct: 151 IKKVLKENYGID 162 >gi|71732769|gb|AAZ40010.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 38.7 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68 >gi|183984529|ref|YP_001852820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] gi|183177855|gb|ACC42965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M] Length = 287 Score = 38.7 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L E ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAAKLSEEQLAALHDAVVS--VLTDAVSRSVGQGAATL 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|71732761|gb|AAZ40006.1| fibronectin binding protein [Clostridium difficile] gi|71732767|gb|AAZ40009.1| fibronectin binding protein [Clostridium difficile] gi|71732791|gb|AAZ40021.1| fibronectin binding protein [Clostridium difficile] gi|71732811|gb|AAZ40031.1| fibronectin binding protein [Clostridium difficile] gi|71732813|gb|AAZ40032.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 38.7 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 68 >gi|90961705|ref|YP_535621.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius UCC118] gi|90820899|gb|ABD99538.1| Exodeoxyribonuclease V alpha chain [Lactobacillus salivarius UCC118] Length = 824 Score = 38.7 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 12/72 (16%) Query: 8 NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVIQ 55 +P K V A L GIG K+++ I KL + + + L E + Sbjct: 91 ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVDAIDVLNNDMDKLEELGLSEKQKDS 150 Query: 56 IRQAIEQDYQVE 67 I++ ++++Y ++ Sbjct: 151 IKKVLKENYGID 162 >gi|182439847|ref|YP_001827566.1| putative integration host factor [Streptomyces griseus subsp. griseus NBRC 13350] gi|239939920|ref|ZP_04691857.1| putative integration host factor [Streptomyces roseosporus NRRL 15998] gi|239978395|ref|ZP_04700919.1| putative integration host factor [Streptomyces albus J1074] gi|239986405|ref|ZP_04707069.1| putative integration host factor [Streptomyces roseosporus NRRL 11379] gi|326780511|ref|ZP_08239776.1| putative integration host factor [Streptomyces cf. griseus XylebKG-1] gi|178468363|dbj|BAG22883.1| putative integration host factor [Streptomyces griseus subsp. griseus NBRC 13350] gi|326660844|gb|EGE45690.1| putative integration host factor [Streptomyces cf. griseus XylebKG-1] Length = 107 Score = 38.7 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|126700212|ref|YP_001089109.1| fibronectin-binding protein [Clostridium difficile 630] gi|115251649|emb|CAJ69482.1| Fibronectin-binding protein A [Clostridium difficile] Length = 591 Score = 38.7 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 197 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 236 >gi|71732775|gb|AAZ40013.1| fibronectin binding protein [Clostridium difficile] gi|71732777|gb|AAZ40014.1| fibronectin binding protein [Clostridium difficile] gi|71732783|gb|AAZ40017.1| fibronectin binding protein [Clostridium difficile] gi|71732789|gb|AAZ40020.1| fibronectin binding protein [Clostridium difficile] gi|71732809|gb|AAZ40030.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 38.7 bits (90), Expect = 0.28, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 68 >gi|291443351|ref|ZP_06582741.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291346298|gb|EFE73202.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 135 Score = 38.7 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 89 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 129 >gi|21666416|gb|AAM73699.1|AF394222_1 fibronectin-binding protein [Clostridium difficile] Length = 591 Score = 38.7 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 197 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236 >gi|254976184|ref|ZP_05272656.1| fibronectin-binding protein [Clostridium difficile QCD-66c26] gi|255093573|ref|ZP_05323051.1| fibronectin-binding protein [Clostridium difficile CIP 107932] gi|255315318|ref|ZP_05356901.1| fibronectin-binding protein [Clostridium difficile QCD-76w55] gi|255517985|ref|ZP_05385661.1| fibronectin-binding protein [Clostridium difficile QCD-97b34] gi|255651101|ref|ZP_05398003.1| fibronectin-binding protein [Clostridium difficile QCD-37x79] gi|260684166|ref|YP_003215451.1| fibronectin-binding protein [Clostridium difficile CD196] gi|260687825|ref|YP_003218959.1| fibronectin-binding protein [Clostridium difficile R20291] gi|306520952|ref|ZP_07407299.1| fibronectin-binding protein [Clostridium difficile QCD-32g58] gi|260210329|emb|CBA64662.1| fibronectin-binding protein [Clostridium difficile CD196] gi|260213842|emb|CBE05835.1| fibronectin-binding protein [Clostridium difficile R20291] Length = 591 Score = 38.7 bits (90), Expect = 0.29, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 197 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236 >gi|320011931|gb|ADW06781.1| putative integration host factor [Streptomyces flavogriseus ATCC 33331] Length = 107 Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|254391349|ref|ZP_05006553.1| guanylate kinase [Streptomyces clavuligerus ATCC 27064] gi|294811543|ref|ZP_06770186.1| putative integration host factor [Streptomyces clavuligerus ATCC 27064] gi|326440071|ref|ZP_08214805.1| putative integration host factor [Streptomyces clavuligerus ATCC 27064] gi|197705040|gb|EDY50852.1| guanylate kinase [Streptomyces clavuligerus ATCC 27064] gi|294324142|gb|EFG05785.1| putative integration host factor [Streptomyces clavuligerus ATCC 27064] Length = 107 Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|254383571|ref|ZP_04998921.1| guanylate kinase [Streptomyces sp. Mg1] gi|194342466|gb|EDX23432.1| guanylate kinase [Streptomyces sp. Mg1] Length = 107 Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|255101757|ref|ZP_05330734.1| fibronectin-binding protein [Clostridium difficile QCD-63q42] gi|255307625|ref|ZP_05351796.1| fibronectin-binding protein [Clostridium difficile ATCC 43255] Length = 591 Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 197 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236 >gi|170291064|ref|YP_001737880.1| DNA topoisomerase VI subunit B [Candidatus Korarchaeum cryptofilum OPF8] gi|170175144|gb|ACB08197.1| DNA topoisomerase VI, B subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 512 Score = 38.3 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 22/37 (59%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 +G K++ ++ +PP++R L + ++ ++ +A+ Sbjct: 266 VGKKTASEVLKIAGLPPDKRPSDLKDEDIRRLYEALR 302 >gi|262091720|gb|ACY25310.1| ribosomal protein S13/S18 [uncultured actinobacterium] Length = 96 Score = 38.3 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I G+G ++ I ++L I V L + I + + Q Sbjct: 55 IPGVGKVKARRILSELDISERCHVGDLTSEQRSIIVERVAQ 95 >gi|328881128|emb|CCA54367.1| integration host factor [Streptomyces venezuelae ATCC 10712] Length = 107 Score = 38.3 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU 11154] Length = 287 Score = 38.3 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I GIG + ++ + I PE ++L E E+ +RQ I + + Sbjct: 168 KIAGIGNIYADEVLWQSKIHPETPANELSEIELATLRQNIISEMK 212 >gi|21219981|ref|NP_625760.1| hypothetical protein SCO1480 [Streptomyces coelicolor A3(2)] gi|239932435|ref|ZP_04689388.1| hypothetical protein SghaA1_29700 [Streptomyces ghanaensis ATCC 14672] gi|256788920|ref|ZP_05527351.1| hypothetical protein SlivT_30913 [Streptomyces lividans TK24] gi|289772807|ref|ZP_06532185.1| guanylate kinase [Streptomyces lividans TK24] gi|290961858|ref|YP_003493040.1| hypothetical protein SCAB_75261 [Streptomyces scabiei 87.22] gi|297198318|ref|ZP_06915715.1| guanylate kinase [Streptomyces sviceus ATCC 29083] gi|302550121|ref|ZP_07302463.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736] gi|8249939|emb|CAB93360.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] gi|197714369|gb|EDY58403.1| guanylate kinase [Streptomyces sviceus ATCC 29083] gi|260651384|emb|CBG74506.1| conserved hypothetical protein [Streptomyces scabiei 87.22] gi|289703006|gb|EFD70435.1| guanylate kinase [Streptomyces lividans TK24] gi|302467739|gb|EFL30832.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736] Length = 107 Score = 38.3 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|282866202|ref|ZP_06275249.1| hypothetical protein SACTEDRAFT_5794 [Streptomyces sp. ACTE] gi|282558986|gb|EFB64541.1| hypothetical protein SACTEDRAFT_5794 [Streptomyces sp. ACTE] Length = 107 Score = 38.3 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|29833412|ref|NP_828046.1| hypothetical protein SAV_6870 [Streptomyces avermitilis MA-4680] gi|29610535|dbj|BAC74581.1| putative integration host factor [Streptomyces avermitilis MA-4680] Length = 107 Score = 38.3 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|25005455|dbj|BAC23143.1| probable mIHF protein [Streptomyces kasugaensis] Length = 107 Score = 38.3 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|323359990|ref|YP_004226386.1| guanylate kinase [Microbacterium testaceum StLB037] gi|323276361|dbj|BAJ76506.1| guanylate kinase [Microbacterium testaceum StLB037] Length = 307 Score = 38.3 bits (89), Expect = 0.33, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 L I IG I + L I P +R+ L + +R ++ Sbjct: 64 LTAIPAIGESKRDRILDALGISPVKRLGGLGSRQRDALRDYLD 106 >gi|302541085|ref|ZP_07293427.1| mIHF [Streptomyces hygroscopicus ATCC 53653] gi|307326802|ref|ZP_07605994.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|297155766|gb|ADI05478.1| hypothetical protein SBI_02357 [Streptomyces bingchenggensis BCW-1] gi|302458703|gb|EFL21796.1| mIHF [Streptomyces himastatinicus ATCC 53653] gi|306887565|gb|EFN18559.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 107 Score = 38.3 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|297195538|ref|ZP_06912936.1| guanylate kinase [Streptomyces pristinaespiralis ATCC 25486] gi|197721360|gb|EDY65268.1| guanylate kinase [Streptomyces pristinaespiralis ATCC 25486] Length = 107 Score = 38.3 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101 >gi|300857582|ref|YP_003782565.1| phosphomannomutase [Corynebacterium pseudotuberculosis FRC41] gi|300685036|gb|ADK27958.1| Phosphomannomutase [Corynebacterium pseudotuberculosis FRC41] gi|302329873|gb|ADL20067.1| Phosphomannomutase [Corynebacterium pseudotuberculosis 1002] Length = 554 Score = 38.3 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 4 IAGVNIPRAKR--VVRALCYIHGIGFKSSQDICNKLAI 39 +AG I R V AL +HG+G ++I K Sbjct: 220 LAGAEISAETRGNVRIALTAMHGVGAALGKEILEKAGF 257 >gi|156937878|ref|YP_001435674.1| DNA topoisomerase VI subunit B [Ignicoccus hospitalis KIN4/I] gi|156566862|gb|ABU82267.1| DNA topoisomerase VI, B subunit [Ignicoccus hospitalis KIN4/I] Length = 553 Score = 38.3 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 1 MARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 M RIA + AK +++ L +G K+++ I + + P+ +L E ++ + A Sbjct: 265 MKRIAQ--LTTAKTLLQMLTTEFQAVGAKTAKAILSMAGLEPDLEPKKLTEEQIKALVNA 322 Query: 60 IEQ 62 +++ Sbjct: 323 MKE 325 >gi|329766435|ref|ZP_08257979.1| DNA topoisomerase VI, B subunit [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137034|gb|EGG41326.1| DNA topoisomerase VI, B subunit [Candidatus Nitrosoarchaeum limnia SFB1] Length = 613 Score = 38.3 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 19/38 (50%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++ PE+R+ + E++++ ++++ Sbjct: 371 IGPSTAVKFAEFAGFKPEKRMGSMTNEELVKLSDSLQK 408 >gi|302205319|gb|ADL09661.1| Putative phosphoglucomutase [Corynebacterium pseudotuberculosis C231] gi|308275559|gb|ADO25458.1| Phosphomannomutase [Corynebacterium pseudotuberculosis I19] Length = 554 Score = 38.3 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Query: 4 IAGVNIPRAKR--VVRALCYIHGIGFKSSQDICNKLAI 39 +AG I R V AL +HG+G ++I K Sbjct: 220 LAGAEISAETRGNVRIALTAMHGVGAALGKEILEKAGF 257 >gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 287 Score = 38.3 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG + +I + I P L E++ + Sbjct: 170 GIGNWMADEILWRAGIHPRTAAGSLTEAQSKTL 202 >gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Leuconostoc argentinum KCTC 3773] Length = 280 Score = 38.3 bits (89), Expect = 0.37, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + ++ + I PE + L E ++ +RQ I Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPETPANLLSEMQLATLRQNI 207 >gi|302533364|ref|ZP_07285706.1| guanylate kinase [Streptomyces sp. C] gi|302442259|gb|EFL14075.1| guanylate kinase [Streptomyces sp. C] Length = 128 Score = 38.3 bits (89), Expect = 0.38, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 82 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122 >gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 37.9 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 21/37 (56%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 G+G + ++ + I PE+ + L + ++ ++R+ I Sbjct: 170 GLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENI 206 >gi|11499620|ref|NP_070862.1| hypothetical protein AF2038 [Archaeoglobus fulgidus DSM 4304] gi|2648497|gb|AAB89216.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 627 Score = 37.9 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 10 PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 + VVR L + G+G ++++C + I +++ +L E E +I + IE Sbjct: 152 DEDREVVRVL-AMSGLGGLYAEEVCLRAGIDKKKKYAELSEDERKKIDEEIE 202 >gi|327541806|gb|EGF28318.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47] Length = 300 Score = 37.9 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 8 NIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 N+ +KR + AL + GIG + +I + P R +L + + +I Sbjct: 160 NLAASKRPIKVALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQWERI 212 >gi|32474898|ref|NP_867892.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] gi|32445438|emb|CAD75439.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1] Length = 300 Score = 37.9 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 8 NIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 N+ +KR + AL + GIG + +I + P R +L + + +I Sbjct: 160 NLAASKRPIKVALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQWERI 212 >gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO 3956] gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum ATCC 14931] gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716] Length = 279 Score = 37.9 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 21/37 (56%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 G+G + ++ + I PE+ + L + ++ ++R+ I Sbjct: 170 GLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENI 206 >gi|83945191|ref|ZP_00957540.1| hypothetical protein OA2633_00450 [Oceanicaulis alexandrii HTCC2633] gi|83851361|gb|EAP89217.1| hypothetical protein OA2633_00450 [Oceanicaulis alexandrii HTCC2633] Length = 191 Score = 37.9 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 L I G+G K++ +L + ++ + +V ++ AI ++E D Sbjct: 131 LTKIKGLGPKAAAS-LAELGVTSLAQIANWSDEDVARMDAAINGRGRIERD 180 >gi|226307944|ref|YP_002767904.1| DNA glycosylase [Rhodococcus erythropolis PR4] gi|226187061|dbj|BAH35165.1| putative DNA glycosylase [Rhodococcus erythropolis PR4] Length = 288 Score = 37.9 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI + V ++L I GIG S +I + + P +L ++ + + Sbjct: 161 ARI------KNSIVDQSL--IAGIGNAYSDEILHTARLSPFATSSRLTPEQISTLYAVMR 212 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 + + R+ + RL G+R H R GLP Sbjct: 213 S--TLADAIERSEGQDAARLKGEKR-SGMRVHARTGLPC 248 >gi|300781712|ref|ZP_07091566.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] gi|300533419|gb|EFK54480.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030] Length = 282 Score = 37.9 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 GIG + +IC + P R V +L E ++R I+ + L T +KR Sbjct: 168 GIGNEYRAEICFLAGVHPARTVGELGEE---KVRSIID----ISRRLMWTNKEEVKR 217 >gi|225571055|ref|ZP_03780072.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] gi|225160136|gb|EEG72755.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM 15053] Length = 275 Score = 37.9 bits (88), Expect = 0.45, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I G+G QDI + I P+++V +L E ++ Sbjct: 169 QRIPGLGNGVLQDILFRAGIHPKKKVGKLTAEETERL 205 >gi|294628327|ref|ZP_06706887.1| mIHF [Streptomyces sp. e14] gi|292831660|gb|EFF90009.1| mIHF [Streptomyces sp. e14] Length = 128 Score = 37.9 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 82 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122 >gi|114609688|ref|XP_001159930.1| PREDICTED: similar to ribosomal protein [Pan troglodytes] Length = 70 Score = 37.9 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K I +R +L E EV + I+ +Q Sbjct: 2 VLRKADIDITKRAGELTEDEVEPVITIIQNLHQ 34 >gi|256789490|ref|ZP_05527921.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289773384|ref|ZP_06532762.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] gi|289703583|gb|EFD71012.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24] Length = 287 Score = 37.9 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G S +I + + P + L + E ++ A LR T+ ++R Sbjct: 172 IAGVGNAYSDEILHAAKMSPFKLAASLTDDETARLYAA----------LRDTLTEAVERS 221 Query: 82 MDLGCYR-GLRHRRGLPVRGQRT 103 + R + GL V G RT Sbjct: 222 RGIAAGRLKAEKKSGLRVHG-RT 243 >gi|118468423|ref|YP_889782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] gi|118169710|gb|ABK70606.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str. MC2 155] Length = 288 Score = 37.9 bits (88), Expect = 0.48, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 GIG S +I + + P +L ++++ + A+ + + R+V L Sbjct: 175 GIGNAYSDEILHVAKLSPFTTAGKLTDAQLGALHDAMIT--VLTDAVSRSVGQQAATLKG 232 Query: 84 LGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 233 EKR-SGLRVHARTGLPC 248 >gi|291440801|ref|ZP_06580191.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291343696|gb|EFE70652.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 128 Score = 37.9 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 82 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122 >gi|318060353|ref|ZP_07979076.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actG] Length = 287 Score = 37.9 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G S +I + + P + +L E E ++ +A LR T+ + R Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 223 Query: 84 L--GCYRGLRHRRGLPVRGQRT 103 + G + + + GL V G RT Sbjct: 224 IAAGSLKAEK-KSGLRVHG-RT 243 >gi|300087641|ref|YP_003758163.1| adenylosuccinate synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527374|gb|ADJ25842.1| adenylosuccinate synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 427 Score = 37.9 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 9/78 (11%) Query: 14 RVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--QAIEQDYQVEGDL 70 R ++L + GIG + + ++ I R L++ EV++IR +E ++ L Sbjct: 120 RGKKSLGTTLRGIGPAFADKV-ARMGI----RAGDLLDPEVLRIRLEYVLEYKNKILTKL 174 Query: 71 RRTVAMNIKRLMDL-GCY 87 ++I+ L +L Y Sbjct: 175 YGEPPVDIEELYNLCRSY 192 >gi|296109018|ref|YP_003615967.1| Fibronectin-binding A domain protein [Methanocaldococcus infernus ME] gi|295433832|gb|ADG13003.1| Fibronectin-binding A domain protein [Methanocaldococcus infernus ME] Length = 666 Score = 37.9 bits (88), Expect = 0.49, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG +++IC + I ++ L E E+ ++ Sbjct: 195 ILGIGGLYAEEICERANID--KKKKNLSEEEIKKL 227 >gi|254819353|ref|ZP_05224354.1| hypothetical protein MintA_05478 [Mycobacterium intracellulare ATCC 13950] Length = 287 Score = 37.6 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L E ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSEKQLAALHDAMIT--VLTDAVSRSVGQGAATL 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|108801300|ref|YP_641497.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119870451|ref|YP_940403.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126437281|ref|YP_001072972.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] gi|108771719|gb|ABG10441.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS] gi|119696540|gb|ABL93613.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS] gi|126237081|gb|ABO00482.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS] Length = 287 Score = 37.6 bits (87), Expect = 0.53, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 GIG S +I + + P ++L +V + A+ + + R+V L Sbjct: 174 GIGNAYSDEILHVAQLSPFATANKLTPEQVATLHDAMLS--VLTDAVSRSVGQQAATLKG 231 Query: 84 LGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 232 EKR-SGLRVHARTGLPC 247 >gi|256393641|ref|YP_003115205.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] gi|256359867|gb|ACU73364.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila DSM 44928] Length = 288 Score = 37.6 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 10/80 (12%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 GIG S +I + + P + +L EV + Q I + + D Sbjct: 175 GIGNAYSDEILHAARMSPYKLAAKLTPDEVADLYQVI-----IGTLTDAVERSRGLPMKD 229 Query: 84 LGCYRGLRHRRGLPVRGQRT 103 L + + GL V G RT Sbjct: 230 LKSEK----KSGLRVHG-RT 244 >gi|255531639|ref|YP_003092011.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] gi|255344623|gb|ACU03949.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366] Length = 258 Score = 37.6 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 11/71 (15%) Query: 22 IHGIGFKSSQDICNKLAIP--------PERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73 I GIG + +I + I P+ +V +L + +R+ I+ Q+ L Sbjct: 158 IRGIGNTYADEILWEAGISPFSVSKAIPKAKVRELHQVIGKLLRKEIQ---QISKMLPDE 214 Query: 74 VAMNIKRLMDL 84 + IK + + Sbjct: 215 LGGEIKDFLKI 225 >gi|302523189|ref|ZP_07275531.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] gi|302432084|gb|EFL03900.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78] Length = 278 Score = 37.6 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G S +I + + P + +L E E ++ +A LR T+ + R Sbjct: 165 GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 214 Query: 84 L--GCYRGLRHRRGLPVRGQRT 103 + G + + + GL V G RT Sbjct: 215 IAAGSLKAEK-KSGLRVHG-RT 234 >gi|291008458|ref|ZP_06566431.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 284 Score = 37.6 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 R +R+ L I GIG S +I + + P +L V ++ + + + Sbjct: 155 RTERIKTVLTDQSMIAGIGNAYSDEILHAAKLSPYATAGRLDADAVERLHATMRE--ILT 212 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLR-H-RRGLPV 98 + R++ + RL G+R H R GLP Sbjct: 213 DAVERSLKQDAARLKAEKR-SGMRVHGRTGLPC 244 >gi|229821354|ref|YP_002882880.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] gi|229567267|gb|ACQ81118.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM 12333] Length = 302 Score = 37.6 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Query: 11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R +++ AL + GIG S +I + + P L + +V ++ A Q Sbjct: 173 RNQQLKGALRDQTLVAGIGNAYSDEILHAARMSPFTLTKSLTDDDVARLTDATRQ 227 >gi|326201884|ref|ZP_08191754.1| Fibronectin-binding A domain protein [Clostridium papyrosolvens DSM 2782] gi|325987679|gb|EGD48505.1| Fibronectin-binding A domain protein [Clostridium papyrosolvens DSM 2782] Length = 592 Score = 37.6 bits (87), Expect = 0.56, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 8 NIPRAKRVV-RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 N+ AK L + G + +DIC+ +P + +++L ES+ +I+ A+ Sbjct: 185 NVEGAKHAEGIILNTVKGFSPYTCRDICSAAGVPSKTPLNELNESDKEKIKTALSN 240 >gi|56551194|ref|YP_162033.1| hypothetical protein ZMO0298 [Zymomonas mobilis subsp. mobilis ZM4] gi|9931343|gb|AAG02153.1|AF212041_9 NADH dehydogenase [Zymomonas mobilis subsp. mobilis ZM4] gi|56542768|gb|AAV88922.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 232 Score = 37.6 bits (87), Expect = 0.57, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 L I G+G K + I L I ++ ++++ +I Sbjct: 156 LTQIKGLGPK-ANKILAALGITRFSQIAAWTDADIAEI 192 >gi|118464184|ref|YP_880320.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] gi|254773947|ref|ZP_05215463.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp. avium ATCC 25291] gi|118165471|gb|ABK66368.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104] Length = 287 Score = 37.6 bits (87), Expect = 0.60, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L + ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSDKQLATLHDAMVT--VLTDAVSRSVGQGAAML 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|268323401|emb|CBH36989.1| conserved hypothetical protein containing fibronectin-binding protein A N-terminal domain, DUF814 family [uncultured archaeon] gi|268324037|emb|CBH37625.1| conserved hypothetical protein containing fibronectin-binding protein A N-terminal (FbpA) domain and DUF814 domain [uncultured archaeon] Length = 631 Score = 37.6 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 16/32 (50%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 ++++C K I R +L +E+ I + I Sbjct: 190 YAEEVCAKAGIDKRMRADELTATEINAIHETI 221 >gi|227542448|ref|ZP_03972497.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181646|gb|EEI62618.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum ATCC 51866] Length = 286 Score = 37.6 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 R K + AL G G ++ I I P +R +L E ++I + Sbjct: 236 RRKTLRAALGSFFG-GADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283 >gi|227487807|ref|ZP_03918123.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092309|gb|EEI27621.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum ATCC 51867] Length = 286 Score = 37.6 bits (87), Expect = 0.62, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 R K + AL G G ++ I I P +R +L E ++I + Sbjct: 236 RRKTLRAALGSFFG-GADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283 >gi|111019239|ref|YP_702211.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] gi|110818769|gb|ABG94053.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1] Length = 288 Score = 37.6 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 13/99 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI + V ++L G+G S +I + I P L E +V + A+ Sbjct: 161 ARI------KNALVDQSLLA--GVGNAYSDEILHTAKISPFATSRTLPEDQVHVLYDAMR 212 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 + ++R++ + RL G+R H R GLP Sbjct: 213 S--VLSDAVQRSLGQDAARLKGEKR-SGMRVHARTGLPC 248 >gi|41406987|ref|NP_959823.1| hypothetical protein MAP0889 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395338|gb|AAS03206.1| hypothetical protein MAP_0889 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 287 Score = 37.6 bits (87), Expect = 0.63, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L + ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSDKQLATLHDAMVT--VLTDAVSRSVGQGAAML 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|300214317|gb|ADJ78733.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) [Lactobacillus salivarius CECT 5713] Length = 207 Score = 37.6 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 R K + AL + G+G + ++ I PE ++L E EV +R I ++ Sbjct: 85 RKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKEL 141 >gi|298524435|ref|ZP_07011844.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] gi|298494229|gb|EFI29523.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 166 Score = 37.6 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +AI + +RR+V L Sbjct: 51 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAIAS--VLSDAVRRSVGQGAAML 108 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 109 KGEKR-SGLRVHARTGLPC 126 >gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM 14469] Length = 300 Score = 37.6 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 20/46 (43%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 Y+ GIG S +I I P R L E E ++ + I + Q Sbjct: 193 QYVAGIGNIYSDEILFAAGIYPGRGACSLTEKEWERLAEEIPRTMQ 238 >gi|119716662|ref|YP_923627.1| hypothetical protein Noca_2435 [Nocardioides sp. JS614] gi|119537323|gb|ABL81940.1| conserved hypothetical protein [Nocardioides sp. JS614] Length = 108 Score = 37.6 bits (87), Expect = 0.66, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 22/46 (47%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 RVV L + G+G ++ + +L I RRV L +V + + Sbjct: 58 RVVDLLQSMPGLGKVRARQVMERLGIAESRRVRGLGAKQVAALEKE 103 >gi|301300324|ref|ZP_07206529.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852060|gb|EFK79739.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 133 Score = 37.2 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Query: 4 IAGVNIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 I N+ R K+ + AL + G+G + ++ I PE ++L E EV +R Sbjct: 3 IFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDN 62 Query: 60 IEQDY 64 I ++ Sbjct: 63 IIKEL 67 >gi|295839952|ref|ZP_06826885.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|302517953|ref|ZP_07270295.1| guanylate kinase [Streptomyces sp. SPB78] gi|318057063|ref|ZP_07975786.1| hypothetical protein SSA3_03921 [Streptomyces sp. SA3_actG] gi|318080116|ref|ZP_07987448.1| hypothetical protein SSA3_26360 [Streptomyces sp. SA3_actF] gi|197696787|gb|EDY43720.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|302426848|gb|EFK98663.1| guanylate kinase [Streptomyces sp. SPB78] Length = 107 Score = 37.2 bits (86), Expect = 0.69, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G + I +L I RRV L +++ + + Sbjct: 61 LESLPGVGKVRANQIMERLGISKSRRVRGLGSNQIASLERE 101 >gi|318078894|ref|ZP_07986226.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF] Length = 210 Score = 37.2 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G S +I + + P + +L E E ++ +A LR T+ + R Sbjct: 97 GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 146 Query: 84 L--GCYRGLRHRRGLPVRGQRT 103 + G + + + GL V G RT Sbjct: 147 IAAGSLKAEK-KSGLRVHG-RT 166 >gi|126459555|ref|YP_001055833.1| DNA topoisomerase VI subunit B [Pyrobaculum calidifontis JCM 11548] gi|126249276|gb|ABO08367.1| DNA topoisomerase VI, B subunit [Pyrobaculum calidifontis JCM 11548] Length = 526 Score = 37.2 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 7 VNIPRAKRVVRA---------LCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V++ K++++A L +G +++ P +V L E++++ Sbjct: 234 VDVDTLKQMIQASRGMTLLEFLTENFDAVGEGTAKAFLEWAGFNPNAKVAGLTPEELVRL 293 Query: 57 RQAIEQ 62 + ++Q Sbjct: 294 VEKMKQ 299 >gi|302539979|ref|ZP_07292321.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces hygroscopicus ATCC 53653] gi|302457597|gb|EFL20690.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase [Streptomyces himastatinicus ATCC 53653] Length = 289 Score = 37.2 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 17/83 (20%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------I 54 RI GV R + V I GIG S +I + + P R L E E+ Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLASDLTEEEIAVLYEVMGA 213 Query: 55 QIRQAIEQDYQV-EGDLRRTVAM 76 +R A+E+ + GDL+ Sbjct: 214 TLRDAVERSRGLAAGDLKTEKRS 236 >gi|307328100|ref|ZP_07607280.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] gi|306886219|gb|EFN17225.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces violaceusniger Tu 4113] Length = 288 Score = 37.2 bits (86), Expect = 0.74, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 17/82 (20%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------I 54 RI GV R + V I GIG S +I + + P R L E E+ Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLASDLTEEEIAGVYEAMGA 213 Query: 55 QIRQAIEQDYQV-EGDLRRTVA 75 +R A+E+ + + DL+ Sbjct: 214 TLRSAVERSHGLAATDLKGEKR 235 >gi|260753165|ref|YP_003226058.1| hypothetical protein Za10_0928 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552528|gb|ACV75474.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 232 Score = 37.2 bits (86), Expect = 0.74, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 L I G+G K + I L I ++ E+++ +I Sbjct: 156 LTQIKGLGPK-ANKILAALGITRFSQIAAWTEADIAEI 192 >gi|297582947|ref|YP_003698727.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] gi|297141404|gb|ADH98161.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus selenitireducens MLS10] Length = 274 Score = 37.2 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 22/41 (53%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +I GIG +I I P++R L ++ +I++ +A+ Sbjct: 162 TFIAGIGNYLRTEILFITGIHPKKRPADLSDTALIRLAEAV 202 >gi|89896847|ref|YP_520334.1| hypothetical protein DSY4101 [Desulfitobacterium hafniense Y51] gi|89336295|dbj|BAE85890.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 272 Score = 37.2 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG + +I I PER+ L + E ++ Sbjct: 167 ISGIGNAYANEILFAAGILPERKTPTLTDGEKERL 201 >gi|71732781|gb|AAZ40016.1| fibronectin binding protein [Clostridium difficile] gi|71732807|gb|AAZ40029.1| fibronectin binding protein [Clostridium difficile] Length = 141 Score = 37.2 bits (86), Expect = 0.76, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%) Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I+ GI +++IC + + + + + + + Sbjct: 29 SIYSRFLGISPIIAKEICYRAGVNQNAIIKYISDEQFDSL 68 >gi|168012220|ref|XP_001758800.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689937|gb|EDQ76306.1| predicted protein [Physcomitrella patens subsp. patens] Length = 52 Score = 37.2 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 23/52 (44%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVI 54 I N+ + V AL G+ K I ++L + + ++L++ ++ Sbjct: 1 YILRTNLVPNEYVEIALIQNFGLSPKKIIQIYDQLGLNDNIKFNKLIKYQIK 52 >gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2] Length = 288 Score = 37.2 bits (86), Expect = 0.78, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG + +I + AI P + +L +E+ ++ Sbjct: 183 GIGNWMADEILWRSAIHPRQLAGELTPAEIRKL 215 >gi|117165133|emb|CAJ88687.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces ambofaciens ATCC 23877] Length = 287 Score = 37.2 bits (86), Expect = 0.78, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 12/83 (14%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G S +I + + P + L + E ++ +A LR T+ ++R Sbjct: 172 IAGVGNAYSDEILHAAKMSPFKLAASLTDEETARLYEA----------LRATLTEAVERS 221 Query: 82 MDLGCYR-GLRHRRGLPVRGQRT 103 + R + GL V G RT Sbjct: 222 RGVAAGRLKAEKKSGLRVHG-RT 243 >gi|134096732|ref|YP_001102393.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] gi|133909355|emb|CAL99467.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea NRRL 2338] Length = 275 Score = 37.2 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 R +R+ L I GIG S +I + + P +L V ++ + + + Sbjct: 146 RTERIKTVLTDQSMIAGIGNAYSDEILHAAKLSPYATAGRLDADAVERLHATMRE--ILT 203 Query: 68 GDLRRTVAMNIKRLMDLGCYRGLR-H-RRGLPV 98 + R++ + RL G+R H R GLP Sbjct: 204 DAVERSLKQDAARLKAEKR-SGMRVHGRTGLPC 235 >gi|323357079|ref|YP_004223475.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323273450|dbj|BAJ73595.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 287 Score = 37.2 bits (86), Expect = 0.80, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 11/82 (13%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-RQAIEQDYQVEGDLRRTVAMNIKR 80 I G+G S +I + + P L + EV ++ R +E + + R +K Sbjct: 172 IAGVGNAYSDEILHAAKMSPYALAATLTDDEVDRLFRAMVETLTEAIDEARGKPPAELKD 231 Query: 81 LMDLGCYRGLRHRRGLPVRGQR 102 RRG+ V G+R Sbjct: 232 AK----------RRGMRVHGRR 243 >gi|291450291|ref|ZP_06589681.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291353240|gb|EFE80142.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 129 Score = 37.2 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 83 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 123 >gi|329938927|ref|ZP_08288301.1| putative integration host factor [Streptomyces griseoaurantiacus M045] gi|329301812|gb|EGG45705.1| putative integration host factor [Streptomyces griseoaurantiacus M045] Length = 80 Score = 37.2 bits (86), Expect = 0.81, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 34 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 74 >gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 295 Score = 37.2 bits (86), Expect = 0.82, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77 GIG + ++ I P R+ +L E EV + + I Q ++ R T + Sbjct: 191 GIGNIYADEVLFASGIHPARKGEELTEQEVGSLYKTIIQILELGIKYRGTTFSD 244 >gi|215410531|ref|ZP_03419339.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 94_M4241A] Length = 160 Score = 37.2 bits (86), Expect = 0.83, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +AI + +RR+V L Sbjct: 45 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAIAS--VLSDAVRRSVGQGAAML 102 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 103 KGEKR-SGLRVHARTGLPC 120 >gi|219667324|ref|YP_002457759.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] gi|219537584|gb|ACL19323.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium hafniense DCB-2] Length = 272 Score = 37.2 bits (86), Expect = 0.84, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG S +I I PER+ L + E ++ Sbjct: 167 ISGIGNAYSNEILFAAGILPERKTPTLTDGERDRL 201 >gi|70607074|ref|YP_255944.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639] gi|68567722|gb|AAY80651.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639] Length = 532 Score = 37.2 bits (86), Expect = 0.85, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 17/36 (47%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 +G ++ I I +++ L + E+ ++ + + Sbjct: 265 VGDVTADKILELSKISKNKKITNLTDEEISRLVEVM 300 >gi|296268041|ref|YP_003650673.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] gi|296090828|gb|ADG86780.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora DSM 43833] Length = 292 Score = 36.8 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG S +I + + P + L + +V + AI Sbjct: 177 ISGIGDAYSDEILHAARLSPFKLADSLTDDQVAALHSAI 215 >gi|256394482|ref|YP_003116046.1| hypothetical protein Caci_5346 [Catenulispora acidiphila DSM 44928] gi|256360708|gb|ACU74205.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928] Length = 104 Score = 36.8 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + GIG ++ I +L I RR+ L +++ + + Sbjct: 61 LESMPGIGKVRAKQIMERLDISETRRIRGLGANQIASLERE 101 >gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp. 'sapolanicus'] Length = 276 Score = 36.8 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68 I GIG + +I I P+R+ L E E +I + +E+ G Sbjct: 171 IAGIGNIYADEILYLSGIKPDRKADTLSEEEKEKIYFNMKDILEKGIIYGG 221 >gi|226361374|ref|YP_002779152.1| DNA glycosylase [Rhodococcus opacus B4] gi|226239859|dbj|BAH50207.1| putative DNA glycosylase [Rhodococcus opacus B4] Length = 288 Score = 36.8 bits (85), Expect = 0.96, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 13/99 (13%) Query: 2 ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ARI + V ++L G+G S +I + I P L E +V + A+ Sbjct: 161 ARI------KNALVDQSLLA--GVGNAYSDEILHTAKISPFATSRTLPEDQVHVLYDAMR 212 Query: 62 QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 + + R++ + RL G+R H R GLP Sbjct: 213 S--VLTDAVERSLGQDAARLKGEKR-SGMRVHARTGLPC 248 >gi|256750933|ref|ZP_05491817.1| Helix-hairpin-helix DNA-binding class 1 [Thermoanaerobacter ethanolicus CCSD1] gi|256750268|gb|EEU63288.1| Helix-hairpin-helix DNA-binding class 1 [Thermoanaerobacter ethanolicus CCSD1] Length = 332 Score = 36.8 bits (85), Expect = 0.97, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIDTAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus DSM 12680] Length = 267 Score = 36.8 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 GIG + +I + P R +L E E+ ++ AI++ Sbjct: 164 GIGNIYADEILFAAGLHPARGASELNEYEISRLHAAIKE 202 >gi|172039237|ref|YP_001805738.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] gi|226761669|sp|B1WTF7|FPG_CYAA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|171700691|gb|ACB53672.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142] Length = 283 Score = 36.8 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 22/89 (24%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ--------AIEQDYQVEGDLRRTVA 75 GIG + + K I P +L + +V ++R+ AIE+ D R Sbjct: 175 GIGNIYADEALFKSGIRPTTLGKELSQPQVKRLREAMIEVLKTAIEEGGTTFSDFRGVTG 234 Query: 76 MNIKRLMDLGCYRGL-----RHRRGLPVR 99 +N G Y G+ RH + P R Sbjct: 235 IN-------GNYSGVAWVYGRHNQ--PCR 254 >gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] gi|90101299|sp|Q3ABL4|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus hydrogenoformans Z-2901] Length = 263 Score = 36.8 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG + +I + + P+R L E E ++ +AI + + + R Sbjct: 158 IAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKILALGIEYR 207 >gi|311894807|dbj|BAJ27215.1| hypothetical protein KSE_13870 [Kitasatospora setae KM-6054] Length = 111 Score = 36.8 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G ++ I +L I RRV L +++ + + Sbjct: 65 LESLPGVGKVRAKQIMERLGISESRRVRGLGTNQIASLERE 105 >gi|297544020|ref|YP_003676322.1| helicase, RecD/TraA family [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841795|gb|ADH60311.1| helicase, RecD/TraA family [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 735 Score = 36.8 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E V+ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGVKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|162455413|ref|YP_001617780.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] gi|161165995|emb|CAN97300.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce 56'] Length = 290 Score = 36.8 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Query: 26 GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLG 85 G + ++ + I P+ V L E E ++ AI +V GD RT+A L + Sbjct: 177 GDSYADEVLFEARIHPKATVQSLSEEETDRLHAAIA---RVLGDATRTIARRAPALDE-- 231 Query: 86 CYRGLRHRRGLPVRG 100 R R L VRG Sbjct: 232 -----RLRDFLKVRG 241 >gi|145486706|ref|XP_001429359.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396451|emb|CAK61961.1| unnamed protein product [Paramecium tetraurelia] Length = 733 Score = 36.8 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 9/65 (13%) Query: 7 VNIPRAKRVVRALCYIHGIGFKS-SQDICNKLAIPPERRVHQL-------VESEVIQIRQ 58 V+ K + A+ GIG + + I +I P + +L EV Q++ Sbjct: 359 VDYHNLKPIRIAITGPPGIGKSTIANQISTYFSI-PHITIKELIQEYLNQTSEEVEQLKT 417 Query: 59 AIEQD 63 +E++ Sbjct: 418 NLEEN 422 >gi|282163419|ref|YP_003355804.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] gi|282155733|dbj|BAI60821.1| putative formamidopyrimidine-DNA glycosylase [Methanocella paludicola SANAE] Length = 269 Score = 36.4 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 I GIG +QDI + P+R++ L E E + +AI D Sbjct: 165 IAGIGNVYAQDILFNAKLHPDRKIPTLTEGERRALFEAIRHDL 207 >gi|117928501|ref|YP_873052.1| putative integration host factor MihF [Acidothermus cellulolyticus 11B] gi|117648964|gb|ABK53066.1| putative integration host factor MihF [Acidothermus cellulolyticus 11B] Length = 113 Score = 36.4 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 18/46 (39%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 RV L + GIG + I +L I RRV L + + Sbjct: 56 RVSALLQALPGIGRARAAQIMERLGIAASRRVRGLGPRQREALVAE 101 >gi|167038184|ref|YP_001665762.1| RecD/TraA family helicase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116593|ref|YP_004186752.1| helicase, RecD/TraA family [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166857018|gb|ABY95426.1| helicase, RecD/TraA family [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929684|gb|ADV80369.1| helicase, RecD/TraA family [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 735 Score = 36.4 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|307265487|ref|ZP_07547042.1| helicase, RecD/TraA family [Thermoanaerobacter wiegelii Rt8.B1] gi|306919441|gb|EFN49660.1| helicase, RecD/TraA family [Thermoanaerobacter wiegelii Rt8.B1] Length = 735 Score = 36.4 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|304404451|ref|ZP_07386112.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] gi|304346258|gb|EFM12091.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus curdlanolyticus YK9] Length = 271 Score = 36.4 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG + +IC +I P R+ L + E ++ Sbjct: 164 IAGIGNCYADEICFVASIRPSTRIPALKDEEWERL 198 >gi|167039107|ref|YP_001662092.1| RecD/TraA family helicase [Thermoanaerobacter sp. X514] gi|300913303|ref|ZP_07130620.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X561] gi|307723683|ref|YP_003903434.1| RecD/TraA family helicase [Thermoanaerobacter sp. X513] gi|166853347|gb|ABY91756.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X514] gi|300889988|gb|EFK85133.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X561] gi|307580744|gb|ADN54143.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X513] Length = 735 Score = 36.4 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|326389597|ref|ZP_08211163.1| helicase, RecD/TraA family [Thermoanaerobacter ethanolicus JW 200] gi|325994312|gb|EGD52738.1| helicase, RecD/TraA family [Thermoanaerobacter ethanolicus JW 200] Length = 735 Score = 36.4 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|21219464|ref|NP_625243.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] gi|6580659|emb|CAB63194.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)] Length = 287 Score = 36.4 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G S ++ + + P + L + E ++ A LR T+ ++R Sbjct: 172 IAGVGNAYSDEVLHAAKMSPFKLAASLTDEETARLYAA----------LRDTLTEAVERS 221 Query: 82 MDLGCYR-GLRHRRGLPVRGQRT 103 + R + GL V G RT Sbjct: 222 RGIAAGRLKAEKKSGLRVHG-RT 243 >gi|289577707|ref|YP_003476334.1| helicase, RecD/TraA family [Thermoanaerobacter italicus Ab9] gi|289527420|gb|ADD01772.1| helicase, RecD/TraA family [Thermoanaerobacter italicus Ab9] Length = 735 Score = 36.4 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I K + + + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLQGYGISTAMAIKIYK 164 >gi|163785136|ref|ZP_02179835.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] gi|159879597|gb|EDP73402.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] Length = 212 Score = 36.4 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 6/71 (8%) Query: 9 IPRAKRVVRA-LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 I K V L I GIG + I +RV E + + Y++ Sbjct: 65 IDNLKNVKLEDLTKIKGIGKTKALQILAIAEFA--KRVC---NEEEKTVLSSPSDVYEIV 119 Query: 68 GDLRRTVAMNI 78 DL+ + Sbjct: 120 KDLKNERQEKL 130 >gi|319653434|ref|ZP_08007534.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] gi|317394918|gb|EFV75656.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2] Length = 269 Score = 36.4 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG S +IC + + P R+ +L E E+ + Sbjct: 166 GIGNCYSDEICFEAGLLPMRKADELDEDEIKIL 198 >gi|145493391|ref|XP_001432691.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399805|emb|CAK65294.1| unnamed protein product [Paramecium tetraurelia] Length = 733 Score = 36.4 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 9/65 (13%) Query: 7 VNIPRAKRVVRALCYIHGIGFKS-SQDICNKLAIPPERRVHQL-------VESEVIQIRQ 58 V+ K + A+ GIG + + I +I P + +L EV Q++ Sbjct: 359 VDYHNLKPIRIAITGPPGIGKSTIANQISTYFSI-PHITIKELIQEYLNQTSEEVEQLKT 417 Query: 59 AIEQD 63 +E++ Sbjct: 418 NLEEN 422 >gi|256833167|ref|YP_003161894.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603] gi|256686698|gb|ACV09591.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603] Length = 600 Score = 36.4 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R K + +AL I G + + I +PP R QL + +I +A+ Sbjct: 235 RRKTLRQALAGIAG-NSQRASTILEAAGVPPTARGEQLTIHDFARIAEAM 283 >gi|307154764|ref|YP_003890148.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] gi|306984992|gb|ADN16873.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822] Length = 277 Score = 36.4 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 GIG + + K I P L ++ ++R AI Q D Sbjct: 174 GIGNIYADEALFKSGIKPNAIACSLTPEQLEKLRLAICDVLQTSID 219 >gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] gi|122449230|sp|Q1WUN7|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius UCC118] gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC 11741] Length = 276 Score = 36.4 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 R K + AL + G+G + ++ I PE ++L E EV +R I ++ Sbjct: 154 RKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKEL 210 >gi|332181038|gb|AEE16726.1| Ribosomal RNA small subunit methyltransferase A [Treponema brennaborense DSM 12168] Length = 294 Score = 36.4 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 6/59 (10%) Query: 11 RAKRVVRALCYIHGIGFK--SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 R K V L + + D+ + I P++R +L +++Q+ I + E Sbjct: 240 RRKTVKNNLTAFY---RNAEKAADVLSAAGIDPQQRAERLTVEQLLQLSD-ISNQHITE 294 >gi|18313187|ref|NP_559854.1| DNA topoisomerase VI subunit B [Pyrobaculum aerophilum str. IM2] gi|28380201|sp|Q8ZVM0|TOP6B_PYRAE RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|18160701|gb|AAL64036.1| DNA topoisomerase VI (type II ) subunit b [Pyrobaculum aerophilum str. IM2] Length = 527 Score = 36.0 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 10/66 (15%) Query: 7 VNIPRAKRVV---RALC-------YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V++ K+++ R L +G +++ P +V L E++++ Sbjct: 232 VDVDTLKQMIQESRGLTLLEFLMENFDAVGEGTAKAFLEWAGFNPNAKVTALTPEELVKL 291 Query: 57 RQAIEQ 62 ++Q Sbjct: 292 VDKMKQ 297 >gi|313898751|ref|ZP_07832286.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] gi|312956635|gb|EFR38268.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein [Clostridium sp. HGF2] Length = 273 Score = 36.0 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 18/33 (54%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG QDI + P+R+++ L + E+ + Sbjct: 173 GIGNGVCQDILFYAGLHPKRKMNTLTKDEINTL 205 >gi|218441992|ref|YP_002380321.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] gi|218174720|gb|ACK73453.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424] Length = 277 Score = 36.0 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 GIG + + K I P+ L ++ ++R AI Q D Sbjct: 174 GIGNIYADEALFKSGIRPDAIACSLTPQQLEKLRWAICDVLQTSID 219 >gi|284161856|ref|YP_003400479.1| Fibronectin-binding A domain protein [Archaeoglobus profundus DSM 5631] gi|284011853|gb|ADB57806.1| Fibronectin-binding A domain protein [Archaeoglobus profundus DSM 5631] Length = 626 Score = 36.0 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 15/33 (45%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G +++ C + I + L + E +I Sbjct: 167 GLGGLFAEETCLRAGIDKNKLGKDLSDEEFERI 199 >gi|224984055|ref|YP_002641357.1| putative lipoprotein [Borrelia valaisiana VS116] gi|224497202|gb|ACN52833.1| putative lipoprotein [Borrelia valaisiana VS116] Length = 356 Score = 36.0 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 17/93 (18%) Query: 10 PRAKRVVR----ALCYIHGIGFKSSQDICNKLAIPPE---------RRVHQLVESEVIQI 56 K+ AL + IG SS ++ K P + +L E +V ++ Sbjct: 51 DENKKGNITSKVALAKV--IGHASSSEL--KFNDDPNSSFSEYYQEKTTGKLTEEDVDKL 106 Query: 57 RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89 + ++ +G L NI+ + Y G Sbjct: 107 KVFFDKTITYQGVLDSIYNQNIRYYNTIATYSG 139 >gi|85860946|ref|YP_463148.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] gi|85724037|gb|ABC78980.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB] Length = 311 Score = 36.0 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + +I + + P RR L + ++ A+ Sbjct: 206 IGGIGNIYACEILYRAGLNPLRRTADLTSEDWRRVGSAM 244 >gi|15840367|ref|NP_335404.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|148822152|ref|YP_001286906.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253800030|ref|YP_003033031.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|254231252|ref|ZP_04924579.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|308231675|ref|ZP_07413410.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308370120|ref|ZP_07420350.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308372976|ref|ZP_07430625.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308379911|ref|ZP_07488077.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] gi|13880533|gb|AAK45218.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis CDC1551] gi|124600311|gb|EAY59321.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C] gi|148720679|gb|ABR05304.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis F11] gi|253321533|gb|ACT26136.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 1435] gi|308216422|gb|EFO75821.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu001] gi|308325248|gb|EFP14099.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu002] gi|308339239|gb|EFP28090.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu005] gi|308363225|gb|EFP52076.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu011] Length = 166 Score = 36.0 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 51 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 108 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 109 KGEKR-SGLRVHARTGLPC 126 >gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1] Length = 281 Score = 36.0 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 14 RVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 R+ AL I GIG + + I P+ L ++ ++ +A++ Sbjct: 165 RIKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQRQRLLKAVQN 216 >gi|187764102|ref|YP_001876551.1| ribosomal protein S13 [Dictyostelium fasciculatum] gi|160688810|gb|ABX45225.1| ribosomal protein S13 [Dictyostelium fasciculatum] Length = 166 Score = 36.0 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV---AMN 77 I G+G ++ +C+ P V ++ +++ + I + ++ D V N Sbjct: 24 KIAGMGESMTKRLCSMCGFLPMTYVSKISTKGGLRLMR-IYKSFKGLSDYSYYVYRKRFN 82 Query: 78 IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112 +R + YR R +G PV QRT TN + K Sbjct: 83 QRRSKE-RAYRSQRFTKGYPV-SQRTRTNGKIASK 115 >gi|239978113|ref|ZP_04700637.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291450010|ref|ZP_06589400.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] gi|291352959|gb|EFE79861.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074] Length = 286 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 I GIG S +I + + P + +L + E + +A+ Sbjct: 171 IAGIGNAYSDEILHAARLSPFKNAGRLTDEETTALYEALRTTLT 214 >gi|120405833|ref|YP_955662.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] gi|119958651|gb|ABM15656.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii PYR-1] Length = 297 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + + P ++L S+++ + A+ + + R+V L Sbjct: 182 IAGIGNAYSDEILHVAKLSPFATANKLTPSQLVTLHDAMIS--VLTDAVTRSVGQQAATL 239 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 240 KGEKR-SGLRVHARTGLPC 257 >gi|254444020|ref|ZP_05057496.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] gi|198258328|gb|EDY82636.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Verrucomicrobiae bacterium DG1235] Length = 266 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 18/33 (54%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G + +I + I P+RR+ L + E+ + Sbjct: 171 GVGNWMADEILWRARIRPDRRLGSLSKGELDAL 203 >gi|153853290|ref|ZP_01994699.1| hypothetical protein DORLON_00685 [Dorea longicatena DSM 13814] gi|149754076|gb|EDM64007.1| hypothetical protein DORLON_00685 [Dorea longicatena DSM 13814] Length = 579 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 3/47 (6%) Query: 10 PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 P +K + ++ GI +++IC + H L E + + Sbjct: 190 PVSKAIYSSMT---GISPVIAEEICYLAGVDSSMTAHDLSEDVLTHL 233 >gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus cellulosilyticus DSM 2522] Length = 264 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 26/40 (65%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 I GIG S +IC + + PER++++L EV+ + Q+I+ Sbjct: 162 ISGIGNLYSDEICYEARLLPERKMNELSTQEVLDLFQSIQ 201 >gi|182413447|ref|YP_001818513.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] gi|177840661|gb|ACB74913.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1] Length = 301 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + RAL GIG S +I + + P +L E+ ++ Sbjct: 151 ENHTLKRALTDPQLFSGIGNSYSDEILHAAKLSPVTLTQKLSPEEIARL 199 >gi|320527164|ref|ZP_08028351.1| dimethyladenosine transferase [Solobacterium moorei F0204] gi|320132492|gb|EFW25035.1| dimethyladenosine transferase [Solobacterium moorei F0204] Length = 280 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 + +I K IP +R +L E+ QI + + Sbjct: 248 KATEILEKANIPVNKRAQELTIDELKQIHEVM 279 >gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4] gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM 20284] Length = 279 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 23/39 (58%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I G+G + ++ I P+RR + L ++E+ +R++I Sbjct: 168 IAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESI 206 >gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 269 Score = 36.0 bits (83), Expect = 1.8, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 30/111 (27%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66 K VV G+G + + I P+R L E++ + I+Q Q+ Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRTAGSLNENDAAILVSVIKQVLQLSIEQ 212 Query: 67 -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102 LR + + K +L Y G R G P R GQR Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTLIETAKHGQR 259 >gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262] gi|21362544|sp|Q92BF1|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262] Length = 273 Score = 36.0 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 19/33 (57%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G + +IC + + PER + L + E+ +I Sbjct: 170 GVGNIYADEICFEAKVHPERAANSLSDKEINRI 202 >gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18] Length = 385 Score = 36.0 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 13 KRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 KRV AL I GIG +I I PE+ + L ES++ Q+ AI Sbjct: 182 KRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQIEQLYSAIN 235 >gi|91773184|ref|YP_565876.1| DNA topoisomerase VI subunit B [Methanococcoides burtonii DSM 6242] gi|121689247|sp|Q12WQ0|TOP6B_METBU RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|91712199|gb|ABE52126.1| DNA topoisomerase, type VI subunit B [Methanococcoides burtonii DSM 6242] Length = 622 Score = 36.0 bits (83), Expect = 1.9, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 18/38 (47%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 IG ++++IC + E +L + ++ A ++ Sbjct: 269 IGLLTAEEICKAAGLDTEMLPSKLTRDQTKKLLDAFKK 306 >gi|285808428|gb|ADC35954.1| putative fapy-DNA glycosylase [uncultured bacterium 98] Length = 299 Score = 35.6 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + RAL GIG S +I + + P + L E ++ Sbjct: 151 ENHTLKRALTDPHLFSGIGNAYSDEILHAAGLSPFKLTRSLTGDEGRKL 199 >gi|119872357|ref|YP_930364.1| DNA topoisomerase VI subunit B [Pyrobaculum islandicum DSM 4184] gi|119673765|gb|ABL88021.1| DNA topoisomerase VI, B subunit [Pyrobaculum islandicum DSM 4184] Length = 528 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 +G +++ P + L E++++ + ++Q Sbjct: 263 VGEGTAKAFLEWAGFNPNTKTTALTPEEIVRLVEKMKQ 300 >gi|229543047|ref|ZP_04432107.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] gi|229327467|gb|EEN93142.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1] Length = 267 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 GIG + S +I + P+++ L ++ ++ ++I Sbjct: 166 GIGNRYSDEILWHAQLRPDQKAGHLDNQQLARLYESIR 203 >gi|167967805|ref|ZP_02550082.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Ra] gi|215426213|ref|ZP_03424132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|215429803|ref|ZP_03427722.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis EAS054] gi|215445090|ref|ZP_03431842.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T85] gi|218752609|ref|ZP_03531405.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM 1503] gi|254363871|ref|ZP_04979917.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|254549924|ref|ZP_05140371.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289555276|ref|ZP_06444486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308370542|ref|ZP_07421943.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308371805|ref|ZP_07426308.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308374140|ref|ZP_07435023.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308375296|ref|ZP_07443456.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308376555|ref|ZP_07439277.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308377554|ref|ZP_07479648.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308378766|ref|ZP_07483841.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308397511|ref|ZP_07492578.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|134149385|gb|EBA41430.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis str. Haarlem] gi|289439908|gb|EFD22401.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 605] gi|308331620|gb|EFP20471.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu003] gi|308335433|gb|EFP24284.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu004] gi|308342884|gb|EFP31735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu006] gi|308346800|gb|EFP35651.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu007] gi|308350716|gb|EFP39567.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu008] gi|308355377|gb|EFP44228.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu009] gi|308359316|gb|EFP48167.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu010] gi|308366882|gb|EFP55733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis SUMu012] gi|328459772|gb|AEB05195.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] Length = 160 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 45 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 103 KGEKR-SGLRVHARTGLPC 120 >gi|152992646|ref|YP_001358367.1| hypothetical protein SUN_1053 [Sulfurovum sp. NBC37-1] gi|151424507|dbj|BAF72010.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 476 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 K+V + L + GIG K ++ I +K VH L E+ ++ + I Sbjct: 409 EKKVEKLLTSVEGIGKKKAEKIMDK--FDTTELVHAL-ETAPEKLVEEIS 455 >gi|303234944|ref|ZP_07321569.1| flavoprotein family protein [Finegoldia magna BVS033A4] gi|302494062|gb|EFL53843.1| flavoprotein family protein [Finegoldia magna BVS033A4] Length = 407 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 3 RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49 RI V++ K +L Y G I +++ N+ I + V +L Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGINYDINVCELS 318 Query: 50 ESEVIQIRQAIEQ 62 + E+ ++ ++ Sbjct: 319 KEEIYKLAHTLKN 331 >gi|254478840|ref|ZP_05092205.1| helicase, RecD/TraA family [Carboxydibrachium pacificum DSM 12653] gi|214035202|gb|EEB75911.1| helicase, RecD/TraA family [Carboxydibrachium pacificum DSM 12653] Length = 735 Score = 35.6 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP--------PERR--VHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I + + P R + L + ++ +I +A E ++ + Sbjct: 88 IPGIGPVTARKIVERFGLDSLHVIETEPHRLREIKGLSDEKIKRISEAYEMQKGIKEVMV 147 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 148 FLHQFGISSHMAIKIYK 164 Score = 33.7 bits (77), Expect = 9.5, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 22 IHGIGFKSSQDICNKLAIPPE 42 I GIGFK++ I L I P Sbjct: 185 IFGIGFKTADKIAESLGIDPH 205 >gi|241760865|ref|ZP_04758954.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374484|gb|EER63945.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 232 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 L I G+G K + I L I ++ ++++ +I Sbjct: 156 LTQIKGLGPK-ANKILAGLGITRFSQIAAWTDADIAEI 192 >gi|20806994|ref|NP_622165.1| exonuclease V subunit alpha [Thermoanaerobacter tengcongensis MB4] gi|20515477|gb|AAM23769.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [Thermoanaerobacter tengcongensis MB4] Length = 765 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 22 IHGIGFKSSQDICNKLAIP--------PERR--VHQLVESEVIQIRQAIEQDYQVEGDLR 71 I GIG +++ I + + P R + L + ++ +I +A E ++ + Sbjct: 118 IPGIGPVTARKIVERFGLDSLHVIETEPHRLREIKGLSDEKIKRISEAYEMQKGIKEVMV 177 Query: 72 RTVAMNIKRLMDLGCYR 88 I M + Y+ Sbjct: 178 FLHQFGISSHMAIKIYK 194 Score = 33.3 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 22 IHGIGFKSSQDICNKLAIPPE 42 I GIGFK++ I L I P Sbjct: 215 IFGIGFKTADKIAESLGIDPH 235 >gi|259500703|ref|ZP_05743605.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners DSM 13335] gi|302191393|ref|ZP_07267647.1| hypothetical protein LineA_05217 [Lactobacillus iners AB-1] gi|259168087|gb|EEW52582.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners DSM 13335] Length = 780 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I Q+ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|300214505|gb|ADJ78921.1| Exodeoxyribonuclease V alpha chain [Lactobacillus salivarius CECT 5713] Length = 154 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Query: 8 NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 +P K V A L GIG K+++ I KL + ++ +++ ++ + Sbjct: 91 ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVD----AIDVLNNDMDKLEE 140 >gi|240172877|ref|ZP_04751536.1| hypothetical protein MkanA1_26427 [Mycobacterium kansasii ATCC 12478] Length = 287 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L ++ + A+ + + R+V L Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSAGQLATLHDAMVS--VLSDAVHRSVGQGAAML 229 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 230 KGEKR-SGLRVHARTGLPC 247 >gi|297162473|gb|ADI12185.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis BCW-1] Length = 240 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 3 RIAGVNIPRAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 R+AG R RV L + G+G +I + I P RR +L E ++ +A Sbjct: 125 RLAG----RHGRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDELTPEERTRLERA 180 Query: 60 IE 61 + Sbjct: 181 MR 182 >gi|67925991|ref|ZP_00519260.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] gi|67852167|gb|EAM47657.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501] Length = 278 Score = 35.6 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G + + K I P L +V ++R+A+ + + D T + + + Sbjct: 175 GMGNIYADEALFKSGILPTTLGKDLTPQQVKRLREAMIEVLKTAIDQGGTTFSDFRGVTG 234 Query: 84 L-GCYRGL-----RHRRGLPVR 99 + G Y G+ RH++ P R Sbjct: 235 INGNYGGVAWVYGRHKQ--PCR 254 >gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira thiodismutans ASO3-1] Length = 273 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 13/35 (37%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG + + I P R L ++ + Sbjct: 166 IAGIGNIYADEALYMAGIHPCTRAVDLSGDQLEAL 200 >gi|15608084|ref|NP_215459.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis H37Rv] gi|31792133|ref|NP_854626.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97] gi|121636869|ref|YP_977092.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660723|ref|YP_001282246.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224989340|ref|YP_002644027.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|260185844|ref|ZP_05763318.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|260199964|ref|ZP_05767455.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|260204150|ref|ZP_05771641.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289442359|ref|ZP_06432103.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289446514|ref|ZP_06436258.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289573573|ref|ZP_06453800.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289749468|ref|ZP_06508846.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289753000|ref|ZP_06512378.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289757029|ref|ZP_06516407.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|289761078|ref|ZP_06520456.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|294996428|ref|ZP_06802119.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 210] gi|297633465|ref|ZP_06951245.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN 4207] gi|297730450|ref|ZP_06959568.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN R506] gi|313657778|ref|ZP_07814658.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN V2475] gi|1524218|emb|CAB01977.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium tuberculosis H37Rv] gi|31617721|emb|CAD93830.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) [Mycobacterium bovis AF2122/97] gi|121492516|emb|CAL70984.1| Possible formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148504875|gb|ABQ72684.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis H37Ra] gi|224772453|dbj|BAH25259.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415278|gb|EFD12518.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T46] gi|289419472|gb|EFD16673.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CPHL_A] gi|289538004|gb|EFD42582.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis K85] gi|289690055|gb|EFD57484.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T92] gi|289693587|gb|EFD61016.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis EAS054] gi|289708584|gb|EFD72600.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM 1503] gi|289712593|gb|EFD76605.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis T85] gi|323720655|gb|EGB29733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis CDC1551A] gi|326904835|gb|EGE51768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis W-148] Length = 158 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 43 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 100 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 101 KGEKR-SGLRVHARTGLPC 118 >gi|169824216|ref|YP_001691827.1| NAD(FAD)-utilizing dehydrogenase [Finegoldia magna ATCC 29328] gi|167831021|dbj|BAG07937.1| NAD(FAD)-utilizing dehydrogenase [Finegoldia magna ATCC 29328] Length = 407 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 3 RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49 RI V++ K +L Y G I +++ N+ I + V +L Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGINYDINVCELS 318 Query: 50 ESEVIQIRQAIEQ 62 + E+ ++ ++ Sbjct: 319 KEEIYKLAHTLKN 331 >gi|116333678|ref|YP_795205.1| formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] gi|116099025|gb|ABJ64174.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367] Length = 286 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 1 MARIAGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57 M +I G K V L I G+G + ++ I P V L S++ ++R Sbjct: 148 MVKIFGK---SHKVVKPFLLDQTRIAGLGNIYADEVLWLSKINPLTPVDTLTPSQLSELR 204 Query: 58 QAI 60 Q I Sbjct: 205 QNI 207 >gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 363 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 11 RAKRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 R+K+V AL I GIG +I I PE+ + L + ++ ++ AI Sbjct: 174 RSKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKELNSAI 228 >gi|210612278|ref|ZP_03289226.1| hypothetical protein CLONEX_01427 [Clostridium nexile DSM 1787] gi|210151652|gb|EEA82659.1| hypothetical protein CLONEX_01427 [Clostridium nexile DSM 1787] Length = 578 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 15/37 (40%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GI +++IC I E +L E +I + Sbjct: 197 TSFTGISPVVAEEICYIAGIDSEITPKELSEDVLIHL 233 >gi|151941253|gb|EDN59631.1| structural maintenance of chromosomes [Saccharomyces cerevisiae YJM789] Length = 1418 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67 K + + + G G ++ + KL +V EV +I + + E +++V Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868 Query: 68 GDLRRTVAMNIKRLMD 83 D + +K+L D Sbjct: 869 SDTVHEMEEELKKLRD 884 >gi|6323115|ref|NP_013187.1| Smc4p [Saccharomyces cerevisiae S288c] gi|29427672|sp|Q12267|SMC4_YEAST RecName: Full=Structural maintenance of chromosomes protein 4 gi|1256888|gb|AAB67590.1| Ylr086wp [Saccharomyces cerevisiae] gi|1360455|emb|CAA97646.1| unnamed protein product [Saccharomyces cerevisiae] gi|285813506|tpg|DAA09402.1| TPA: Smc4p [Saccharomyces cerevisiae S288c] Length = 1418 Score = 35.6 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67 K + + + G G ++ + KL +V EV +I + + E +++V Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868 Query: 68 GDLRRTVAMNIKRLMD 83 D + +K+L D Sbjct: 869 SDTVHEMEEELKKLRD 884 >gi|190406122|gb|EDV09389.1| structural maintenance of chromosome 4 [Saccharomyces cerevisiae RM11-1a] Length = 1418 Score = 35.6 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67 K + + + G G ++ + KL +V EV +I + + E +++V Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868 Query: 68 GDLRRTVAMNIKRLMD 83 D + +K+L D Sbjct: 869 SDTVHEMEEELKKLRD 884 >gi|113474804|ref|YP_720865.1| formamidopyrimidine-DNA glycosylase [Trichodesmium erythraeum IMS101] gi|123352603|sp|Q117D2|FPG_TRIEI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|110165852|gb|ABG50392.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Trichodesmium erythraeum IMS101] Length = 300 Score = 35.6 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Query: 11 RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 R + + AL I G+G + + I P L E ++ Q+ AI + Q Sbjct: 181 RHRPIKTALLDQTTIAGLGNIYADEALFLSGIRPTTICKDLTEKQIEQLHLAILKVLQT 239 >gi|323347562|gb|EGA81830.1| Smc4p [Saccharomyces cerevisiae Lalvin QA23] Length = 1418 Score = 35.6 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67 K + + + G G ++ + KL +V EV +I + + E +++V Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868 Query: 68 GDLRRTVAMNIKRLMD 83 D + +K+L D Sbjct: 869 SDTVHEMEEELKKLRD 884 >gi|312875454|ref|ZP_07735457.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2053A-b] gi|311088965|gb|EFQ47406.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2053A-b] Length = 780 Score = 35.6 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I Q+ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium marneffei ATCC 18224] Length = 362 Score = 35.6 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Query: 11 RAKRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 ++KRV AL I GIG +I I PE+ + L + ++ Q+ +I+ Sbjct: 174 KSKRVPIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSID 229 >gi|325912826|ref|ZP_08175204.1| helicase, RecD/TraA family [Lactobacillus iners UPII 60-B] gi|325477819|gb|EGC80953.1| helicase, RecD/TraA family [Lactobacillus iners UPII 60-B] Length = 780 Score = 35.6 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I Q+ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|320159790|ref|YP_004173014.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1] gi|319993643|dbj|BAJ62414.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1] Length = 305 Score = 35.6 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 11 RAKRVVRALCYIHGIGFK--SSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 + K + AL G+G+K ++ + + I P RR L E + A Sbjct: 247 KRKTLRNALSS--GLGWKGERAESLLRQAGIDPNRRAESLALEEWALLVDA 295 >gi|315653462|ref|ZP_07906383.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners ATCC 55195] gi|315489153|gb|EFU78794.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners ATCC 55195] Length = 780 Score = 35.6 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I Q+ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|309807244|ref|ZP_07701216.1| helicase, RecD/TraA family [Lactobacillus iners LactinV 03V1-b] gi|308166382|gb|EFO68589.1| helicase, RecD/TraA family [Lactobacillus iners LactinV 03V1-b] Length = 780 Score = 35.6 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I Q+ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|119487791|ref|ZP_01621300.1| DNA repair protein RadC [Lyngbya sp. PCC 8106] gi|119455624|gb|EAW36761.1| DNA repair protein RadC [Lyngbya sp. PCC 8106] Length = 243 Score = 35.6 bits (82), Expect = 2.4, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 2/63 (3%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 L IHGIG + I I +RV QL SE I + DL Sbjct: 79 LTQIHGIGPAKATTIIAA--IELGKRVFQLRPSEKAIIETPQAAADALSQDLMWQTQERF 136 Query: 79 KRL 81 L Sbjct: 137 AVL 139 >gi|254425007|ref|ZP_05038725.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] gi|196192496|gb|EDX87460.1| Formamidopyrimidine-DNA glycosylase H2TH domain family [Synechococcus sp. PCC 7335] Length = 277 Score = 35.6 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 11/77 (14%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA-IEQDYQ------VEGDLRRTVAM 76 GIG +I + P+ R + ++ + A I YQ V DL + Sbjct: 167 GIGNYLRSEILFVAQLHPQMRPIDCTDEQLFTLANASISIAYQSYRYKGVTNDLDLANRL 226 Query: 77 NIKRLMDLGCYRGLRHR 93 K L YR R+R Sbjct: 227 KAKGL----SYREYRYR 239 >gi|342763|gb|AAA70291.1| ribosomal protein S13 [Oenothera berteroana] Length = 26 Score = 35.6 bits (82), Expect = 2.5, Method: Composition-based stats. Identities = 15/22 (68%), Positives = 19/22 (86%) Query: 91 RHRRGLPVRGQRTHTNARTRKK 112 RH+ G P+RGQR+HTNART +K Sbjct: 1 RHQDGSPLRGQRSHTNARTSRK 22 >gi|108760481|ref|YP_634069.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] gi|108464361|gb|ABF89546.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622] Length = 290 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 12 AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 K + AL I G+G + + + + P R+ L E ++ QAI Sbjct: 153 RKELKVALMDQERISGLGNIHAAEALFRAGLHPSRQPGSLTPDEWKRLVQAIRATIDFG 211 >gi|158320452|ref|YP_001512959.1| fibronectin-binding A domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140651|gb|ABW18963.1| Fibronectin-binding A domain protein [Alkaliphilus oremlandii OhILAs] Length = 593 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Query: 15 VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + +AL HGI S++IC +I + + L E + I Sbjct: 194 LYKALYTSFHGISPLISREICFVSSIDEDILLTNLSEDNLKSI 236 >gi|297587494|ref|ZP_06946138.1| pyridine nucleotide-disulfide oxidoreductase [Finegoldia magna ATCC 53516] gi|297574183|gb|EFH92903.1| pyridine nucleotide-disulfide oxidoreductase [Finegoldia magna ATCC 53516] Length = 407 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 3 RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49 RI V++ K +L Y G I +++ N+ I + V +L Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGISYDINVCELS 318 Query: 50 ESEVIQIRQAIEQ 62 + E+ ++ ++ Sbjct: 319 KEEIYKLAHTLKN 331 >gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens] Length = 259 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGD 69 I GIG ++ I PE+ L E EV ++ R+ +E+ V+ D Sbjct: 182 IAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDAD 233 >gi|294497645|ref|YP_003561345.1| endonuclease VIII [Bacillus megaterium QM B1551] gi|294347582|gb|ADE67911.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium QM B1551] Length = 272 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA----IEQDYQVEG 68 I GIG +I I P R E ++ + +A ++Q Y+ G Sbjct: 164 IAGIGNYLRSEILFVAGINPAARPVDCTEEQLKKAAEATISLVKQSYETGG 214 >gi|326774165|ref|ZP_08233447.1| phosphomannomutase [Actinomyces viscosus C505] gi|326636304|gb|EGE37208.1| phosphomannomutase [Actinomyces viscosus C505] Length = 579 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 13/79 (16%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAI------------PPER-RVHQLVESEVIQIRQAIE 61 V L +HG+G + +++ + P+ V E + A++ Sbjct: 243 VRIVLTAMHGVGGATCREVLARAGFTDVVEVAEQFEPDPDFPTVAFPNPEEPGALDLALD 302 Query: 62 QDYQVEGDLRRTVAMNIKR 80 + +VE DL + R Sbjct: 303 KARKVEADLVIANDPDADR 321 >gi|229820532|ref|YP_002882058.1| hypothetical protein Bcav_2041 [Beutenbergia cavernae DSM 12333] gi|229566445|gb|ACQ80296.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length = 103 Score = 35.2 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 +VV L + G+G +++ I +++ I RRV L + + + Sbjct: 56 KVVALLESLPGVGKVTARQIMSEVGISESRRVRGLGPHQAAALVE 100 >gi|289744675|ref|ZP_06504053.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] gi|289685203|gb|EFD52691.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis 02_1987] Length = 166 Score = 35.2 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 51 IAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 108 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 109 KGEKR-SGLRVHARTGLPC 126 >gi|226305561|ref|YP_002765521.1| phosphoglucomutase [Rhodococcus erythropolis PR4] gi|226184678|dbj|BAH32782.1| putative phosphoglucomutase [Rhodococcus erythropolis PR4] Length = 530 Score = 35.2 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Query: 1 MARIAGVNIP--RAKRVVRALCYIHGIGFKSSQDICNKLAI 39 +ARIA +P A+ + AL +HG+G +++ Sbjct: 197 IARIA--TLPHGDARSIRIALTAMHGVGGETATAALRAAGF 235 >gi|219666826|ref|YP_002457261.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] gi|219537086|gb|ACL18825.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense DCB-2] Length = 281 Score = 35.2 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 22/37 (59%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 GIG + QDI + I P+R++ L + E ++ QA+ Sbjct: 171 GIGNGTLQDILFEAGIHPKRKIGTLEQWERDKLLQAV 207 >gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378] Length = 273 Score = 35.2 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 19/33 (57%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G + +IC + + PER + L + E+ +I Sbjct: 170 GVGNIYADEICFEAKVHPERAANTLSDKEINRI 202 >gi|168490159|ref|ZP_02714358.1| conserved hypothetical protein [Streptococcus pneumoniae SP195] gi|168494821|ref|ZP_02718964.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|168494915|ref|ZP_02719058.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|168494968|ref|ZP_02719111.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|168494983|ref|ZP_02719126.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|183571457|gb|EDT91985.1| conserved hypothetical protein [Streptococcus pneumoniae SP195] gi|183575124|gb|EDT95652.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|183575158|gb|EDT95686.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|183575216|gb|EDT95744.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] gi|183575308|gb|EDT95836.1| conserved hypothetical protein [Streptococcus pneumoniae CDC3059-06] Length = 126 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Query: 23 HGIGFKSSQDICNKLAIPPERRV--HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 HG ++ ++ + RV +L + + +I + + YQ EG L + + +IKR Sbjct: 53 HGSNTSLAKTFLYQINVESTNRVECKEL-QGRIEKIMEE-QGFYQTEGGLEQWIP-DIKR 109 Query: 81 LMDLGCYRGL 90 +D+ YRG+ Sbjct: 110 YVDVRTYRGM 119 >gi|326405833|gb|ADZ62904.1| NAD/FAD-utilizing dehydrogenase [Lactococcus lactis subsp. lactis CV56] Length = 425 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 I K I P L E ++ +I ++ +++Q+ Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348 >gi|322418248|ref|YP_004197471.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] gi|320124635|gb|ADW12195.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18] Length = 261 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 16/39 (41%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + +I I P+ +L V + AI Sbjct: 160 IGGIGNAYADEILWAARISPKSPAGKLPPEAVKALADAI 198 >gi|256425446|ref|YP_003126099.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] gi|256040354|gb|ACU63898.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM 2588] Length = 259 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-----EQDYQVEGDLRRTVAM 76 I GIG + +I + I P +++ ++V + AI E + Q+ + +A Sbjct: 158 IRGIGNAYADEILWEAGISPFSIANKIPATKVKALHAAIHNVLKEAEKQIRKEHPDIIAG 217 Query: 77 NIKRLMDL 84 I+ M + Sbjct: 218 EIRDFMKI 225 >gi|15672240|ref|NP_266414.1| hypothetical protein L56208 [Lactococcus lactis subsp. lactis Il1403] gi|12723118|gb|AAK04356.1|AE006263_3 hypothetical protein L56208 [Lactococcus lactis subsp. lactis Il1403] Length = 423 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 I K I P L E ++ +I ++ +++Q+ Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348 >gi|320102895|ref|YP_004178486.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] gi|319750177|gb|ADV61937.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644] Length = 288 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 GIG + +IC I PE + L +V ++ AI Sbjct: 171 GIGNIYADEICFAARIHPEIPANTLSARQVDRLHAAIS 208 >gi|317124736|ref|YP_004098848.1| hypothetical protein Intca_1608 [Intrasporangium calvum DSM 43043] gi|315588824|gb|ADU48121.1| hypothetical protein Intca_1608 [Intrasporangium calvum DSM 43043] Length = 105 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 19/38 (50%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 L + G+G ++ I ++ I RRV L ++V + Sbjct: 61 LESLPGVGRVRAKAIMAEVGIAESRRVRGLGANQVAAL 98 >gi|281490746|ref|YP_003352726.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis KF147] gi|281374515|gb|ADA64036.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis KF147] Length = 425 Score = 35.2 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 I K I P L E ++ +I ++ +++Q+ Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348 >gi|290559894|gb|EFD93216.1| protein of unknown function DUF814 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 587 Score = 35.2 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 20/36 (55%) Query: 23 HGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 IG ++++C + + ++ +L + E+ ++++ Sbjct: 177 FAIGGNYAEEVCFRAEVDKTKKSSELNKEEIEKLKE 212 >gi|169824351|ref|YP_001691962.1| fibronectin-binding protein [Finegoldia magna ATCC 29328] gi|167831156|dbj|BAG08072.1| fibronectin-binding protein [Finegoldia magna ATCC 29328] Length = 578 Score = 35.2 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75 G S++IC + + RV L + E + IR+ I +Y+ + Sbjct: 199 GFSPTISREICLRADLDYNIRVEDLNDDEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258 Query: 76 MNIKRLMDLGCY 87 + ++ L Y Sbjct: 259 LKDFHVIKLEKY 270 >gi|209523386|ref|ZP_03271941.1| SMC domain protein [Arthrospira maxima CS-328] gi|209496128|gb|EDZ96428.1| SMC domain protein [Arthrospira maxima CS-328] Length = 403 Score = 35.2 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I+G+G S + + L I R + +L + + +I I+ + +L+ + ++I Sbjct: 31 INGVGKSS---VLDALRIAFSRILPELTDCQERRINFNIDDIMIGKTELKVEINVDISG- 86 Query: 82 MDLGC--YRGLRHRRGLP 97 + C RG RH + L Sbjct: 87 IPFRCKVSRGKRHEQELK 104 >gi|89893499|ref|YP_516986.1| hypothetical protein DSY0753 [Desulfitobacterium hafniense Y51] gi|89332947|dbj|BAE82542.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 349 Score = 35.2 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 23/39 (58%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 GIG + QDI + I P+R++ L + E ++ QA+ + Sbjct: 239 GIGNGTLQDILFEAGIHPKRKIGTLEQWERDKLLQAVMK 277 >gi|323702034|ref|ZP_08113702.1| Fibronectin-binding A domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532916|gb|EGB22787.1| Fibronectin-binding A domain protein [Desulfotomaculum nigrificans DSM 574] Length = 597 Score = 35.2 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 22/38 (57%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 L I GIG ++ +++ + +PP+ V+ + E+ ++ Sbjct: 200 LQKIAGIGPQTCRELVVRAGLPPDYLVNHCGDYELTKL 237 >gi|302380926|ref|ZP_07269388.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3] gi|302311304|gb|EFK93323.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3] Length = 407 Score = 35.2 bits (81), Expect = 3.0, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%) Query: 3 RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49 RI V++ K +L Y G I +++ N+ I + V +L Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQTGINYDINVCELS 318 Query: 50 ESEVIQIRQAIEQ 62 + E+ ++ ++ Sbjct: 319 KEEIYKLAHTLKN 331 >gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911] Length = 275 Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 7/61 (11%) Query: 3 RIAGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 R+AG N + V AL + G+G + + I PER L + E+ ++ + Sbjct: 151 RLAGTN----RAVKTALLDQKAVVGLGNIYVDEALFRAGIHPERLASSLSDDEIGRLHKE 206 Query: 60 I 60 I Sbjct: 207 I 207 >gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC 11563] Length = 285 Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68 I GIG + +I I PE+ L + E+ I R+ + +V G Sbjct: 168 IAGIGNIYADEILFAAKIHPEQSARSLYDEEIQAIITESRRIMASAIEVGG 218 >gi|284991552|ref|YP_003410106.1| hypothetical protein Gobs_3128 [Geodermatophilus obscurus DSM 43160] gi|284064797|gb|ADB75735.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length = 116 Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 RV L + G+G + I +L I P RRV L ++ + Sbjct: 56 RVSAVLESLPGVGKARAAKIMERLEISPTRRVRGLGANQRRALESE 101 >gi|126640390|ref|YP_001083374.1| hypothetical protein A1S_0304 [Acinetobacter baumannii ATCC 17978] gi|126386274|gb|ABO10772.1| hypothetical protein A1S_0304 [Acinetobacter baumannii ATCC 17978] Length = 992 Score = 35.2 bits (81), Expect = 3.1, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 16/92 (17%) Query: 23 HGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD----LRRTVAMNI 78 GIG S+ + ++++ S +E + G + N+ Sbjct: 512 FGIGLHSAFLLLENTLEDTDKKIKFKTCSYFNNENLEVEMFSPLGGKQGFCFINKIQDNL 571 Query: 79 KR------LMDLG-----CYRGLRHRRGLPVR 99 K L+ + YRGL +R+ PVR Sbjct: 572 KHEYGAEFLIKIKRKFILSYRGL-YRKKSPVR 602 >gi|257068645|ref|YP_003154900.1| hypothetical protein Bfae_14790 [Brachybacterium faecium DSM 4810] gi|256559463|gb|ACU85310.1| hypothetical protein Bfae_14790 [Brachybacterium faecium DSM 4810] Length = 108 Score = 35.2 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 22/51 (43%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 I RV L + G+G +Q I ++ I P R++ L + ++ Sbjct: 54 EIVGRLRVSALLEALPGVGKVKAQQIMEEIGISPSRKIRGLGSHQAEKLVA 104 >gi|326632100|gb|ADZ99052.1| ribosomal protein S13 [Physarum polycephalum] Length = 186 Score = 35.2 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE--QDYQVEGDLRRTVAMNIK 79 +GIG + + + L P + EVI ++ + + +R V +++ Sbjct: 22 FYGIGKIKATRLNSFLLNHPVQTRFTFNFKEVIYPSTGLDIWKKIPKDMKIRLCVENHLR 81 Query: 80 RLMDLGCYRGLRHRRGLPVRGQRTHTNA 107 + CY+ R + LP +GQRT NA Sbjct: 82 NKILTYCYQMYRLFQNLPTKGQRTKANA 109 >gi|239947088|ref|ZP_04698841.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921364|gb|EER21388.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of Ixodes scapularis] Length = 273 Score = 35.2 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 21/41 (51%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I G+G + + + I P++ + L + E+ + ++I + Sbjct: 167 IVGVGNIYASESLHLARIHPDKLGNDLNDDEIESLIKSIRE 207 >gi|116511080|ref|YP_808296.1| flavoprotein [Lactococcus lactis subsp. cremoris SK11] gi|116106734|gb|ABJ71874.1| Predicted flavoprotein [Lactococcus lactis subsp. cremoris SK11] Length = 424 Score = 35.2 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 7/42 (16%) Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQ-------AIEQDYQVE 67 I K I P L E ++ ++ Q I + +E Sbjct: 316 ILEKAGINPALPAKSLSEQQIEKLVQLFKNWQIIINKTLPIE 357 >gi|284028154|ref|YP_003378085.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] gi|283807447|gb|ADB29286.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836] Length = 287 Score = 35.2 bits (81), Expect = 3.3, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + + P + L + E+ + A+++ + D + +A Sbjct: 172 IAGIGNAYSDEILHVARMSPFKPASNLSDDELHVLYTAMQETLRDAVDRSKGLAA----- 226 Query: 82 MDLGCYRGLRHRRGLPVRG 100 DL + + GL V G Sbjct: 227 QDLKSEK----KSGLRVHG 241 >gi|215402744|ref|ZP_03414925.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis 02_1987] Length = 160 Score = 34.9 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 45 IAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102 Query: 82 MDLGCYRGLR-HRR-GLPV 98 GLR H R GLP Sbjct: 103 KGEKR-SGLRVHARTGLPC 120 >gi|18404050|ref|NP_564608.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana] gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana] gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 390 Score = 34.9 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69 YI GIG + ++ + I P + L + + I++ IE+ +V+ D Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDAD 232 >gi|2204269|emb|CAA97648.1| unnamed protein product [Saccharomyces cerevisiae] Length = 1162 Score = 34.9 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 26 GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLM 82 G ++ + KL +V EV +I + + E +++V D + +K+L Sbjct: 569 GNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLR 627 Query: 83 D 83 D Sbjct: 628 D 628 >gi|193214453|ref|YP_001995652.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Chloroherpeton thalassium ATCC 35110] gi|193087930|gb|ACF13205.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Chloroherpeton thalassium ATCC 35110] Length = 682 Score = 34.9 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%) Query: 17 RALCYIHGIG-FKSSQDI 33 AL YI+GIG + + DI Sbjct: 222 IALTYIYGIGDRRKAYDI 239 >gi|315426179|dbj|BAJ47823.1| DNA topoisomerase VI subunit B [Candidatus Caldiarchaeum subterraneum] Length = 520 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 IG K+++++ + PE +L +V + A Sbjct: 272 IGPKTAKEVLELAGLKPETSPRKLSHEQVTALVDA 306 >gi|145592125|ref|YP_001154127.1| DNA topoisomerase VI subunit B [Pyrobaculum arsenaticum DSM 13514] gi|145283893|gb|ABP51475.1| DNA topoisomerase VI, B subunit [Pyrobaculum arsenaticum DSM 13514] Length = 528 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 +G +++ P + L E++++ + ++Q Sbjct: 260 VGEGTAKAFLEWAGFNPNAKATALTPEELVRLVEKMKQ 297 >gi|300781662|ref|ZP_07091516.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC 33030] gi|300533369|gb|EFK54430.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC 33030] Length = 302 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 R K + L ++G G +++ I P R +L + +++ + + Sbjct: 253 RRKTLRACLTGVYGSGPA-AEEALRAAGIDPGLRGEKLSVEDFVRLAEVTD 302 >gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] Length = 390 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69 YI GIG + ++ + I P + L + + I++ IE+ +V+ D Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDAD 232 >gi|30695252|ref|NP_849798.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase [Arabidopsis thaliana] gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192 comes from this gene gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana] gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis thaliana] gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana] Length = 274 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69 YI GIG + ++ + I P + L + + I++ I+ QV D Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIQHAVQVNAD 232 >gi|308463479|ref|XP_003094013.1| hypothetical protein CRE_16394 [Caenorhabditis remanei] gi|308248676|gb|EFO92628.1| hypothetical protein CRE_16394 [Caenorhabditis remanei] Length = 516 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 6/35 (17%), Positives = 16/35 (45%), Gaps = 3/35 (8%) Query: 34 CNKLAIPPERRVHQLVESEVIQIR---QAIEQDYQ 65 C K + +R +L + + +I + ++ +Q Sbjct: 44 CRKADVDVNKRAGELSKEDFDKIVTICKIMQNPFQ 78 >gi|121533715|ref|ZP_01665542.1| protein of unknown function DUF814 [Thermosinus carboxydivorans Nor1] gi|121307706|gb|EAX48621.1| protein of unknown function DUF814 [Thermosinus carboxydivorans Nor1] Length = 478 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 23/39 (58%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 GIG +++++ + +P + ++ QL ++ + +A++ Sbjct: 94 GIGPLTAKELVWRAGLPADIKIDQLDTADFASLAEAVQD 132 >gi|227115115|ref|ZP_03828771.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 269 Score = 34.9 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 30/111 (27%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66 K VV G+G + + I P+R L ES+ + I+Q Q+ Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRTAGSLNESDAAILVGVIKQVLQLSIEQ 212 Query: 67 -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102 LR + + K +L Y G R G P R GQR Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTPIEIAKHGQR 259 >gi|294632524|ref|ZP_06711084.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] gi|292835857|gb|EFF94206.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14] Length = 269 Score = 34.9 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 11/80 (13%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G S +I + + P +R L + E+ + A LR T+ ++R Sbjct: 200 IAGVGNAYSDEILHAARMSPFKRTAALTDEEIAGLYAA----------LRTTLTEAVERS 249 Query: 82 MDLGCYR-GLRHRRGLPVRG 100 + R + GL V G Sbjct: 250 RGVAAGRLKAEKKSGLRVHG 269 >gi|29833831|ref|NP_828465.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] gi|29610955|dbj|BAC75000.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis MA-4680] Length = 286 Score = 34.9 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 15/97 (15%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 +R+ AL I G+G S +I + + P + L E+ Q+ A Sbjct: 157 ERRRIKGALRDQSLIAGVGNAYSDEILHAAKMSPFKLTSALTAEEIRQLYAA-------- 208 Query: 68 GDLRRTVAMNIKRLMDLGCYR-GLRHRRGLPVRGQRT 103 LR T+ ++R L R + GL V G RT Sbjct: 209 --LRTTLTEAVERSRGLAAGRLKAEKKTGLRVHG-RT 242 >gi|218133746|ref|ZP_03462550.1| hypothetical protein BACPEC_01615 [Bacteroides pectinophilus ATCC 43243] gi|217991121|gb|EEC57127.1| hypothetical protein BACPEC_01615 [Bacteroides pectinophilus ATCC 43243] Length = 582 Score = 34.9 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 3/48 (6%) Query: 9 IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + +K + L GI +++IC + I ++ L E ++ Sbjct: 189 LKSSKALYTGLT---GISPVIAEEICYRAGIESDQPAGTLSSDEQHRL 233 >gi|329921345|ref|ZP_08277783.1| helicase, RecD/TraA family [Lactobacillus iners SPIN 1401G] gi|328934637|gb|EGG31141.1| helicase, RecD/TraA family [Lactobacillus iners SPIN 1401G] Length = 780 Score = 34.9 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I ++ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|288932692|ref|YP_003436752.1| Fibronectin-binding A domain protein [Ferroglobus placidus DSM 10642] gi|288894940|gb|ADC66477.1| Fibronectin-binding A domain protein [Ferroglobus placidus DSM 10642] Length = 646 Score = 34.9 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 24/42 (57%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G+G +++I + + ++ +L E EV +I + +++ ++ Sbjct: 177 GLGGLYAEEILERAGVNKKKPGKELEEDEVRRIFEEMKKIFE 218 >gi|239502346|ref|ZP_04661656.1| putative oxydoreductase protein, zinc-containing (quinone oxidoreductase, NADPH dependent) [Acinetobacter baumannii AB900] Length = 332 Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Query: 8 NIPRAKRVVRALCYIHG----IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 +I R K+ AL IHG IG ++ IC+ L I V E +V + Sbjct: 139 DIGRLKKDEIAL--IHGGASGIG-TTALAICHALGIKTFATVG--SEDKVEALSD 188 >gi|330431949|gb|AEC17008.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179] Length = 285 Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 G+G + ++ I P V L + + ++ I+Q Q Sbjct: 166 GVGNIYANEVLFNCGIYPNAPVSSLSKEDCERLVANIKQTLQ 207 >gi|312873951|ref|ZP_07733987.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2052A-d] gi|325911498|ref|ZP_08173909.1| helicase, RecD/TraA family [Lactobacillus iners UPII 143-D] gi|311090500|gb|EFQ48908.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2052A-d] gi|325476698|gb|EGC79853.1| helicase, RecD/TraA family [Lactobacillus iners UPII 143-D] Length = 780 Score = 34.9 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I ++ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum VaMs.102] Length = 390 Score = 34.9 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 +I GIG + ++ + + PE+ + E+ I Sbjct: 166 THISGIGNWVADEVLYQANVHPEQYCDDFSDREIKAI 202 >gi|295703014|ref|YP_003596089.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] gi|294800673|gb|ADF37739.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or apyrimidinic site) lyase nei) [Bacillus megaterium DSM 319] Length = 272 Score = 34.9 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA----IEQDYQVEG 68 I GIG +I I P R E ++ + +A ++Q Y+ G Sbjct: 164 IAGIGNYLRSEILFVAGINPASRPVDCTEEQLKKAAEATISLVKQSYETGG 214 >gi|225568125|ref|ZP_03777150.1| hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM 15053] gi|225163078|gb|EEG75697.1| hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM 15053] Length = 203 Score = 34.9 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQI 56 Y G G ++IC K I P+ V L ++ +I Sbjct: 154 YAFGGGRTVIKEICGKYGIDPDTAVISALTAEQLEEI 190 >gi|84496652|ref|ZP_00995506.1| hypothetical protein JNB_03995 [Janibacter sp. HTCC2649] gi|84383420|gb|EAP99301.1| hypothetical protein JNB_03995 [Janibacter sp. HTCC2649] Length = 105 Score = 34.9 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 25/55 (45%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 ++ RV L + G+G ++ + + I RRV L ++++ + ++ Sbjct: 50 DVIGKMRVSALLESMPGVGRVKAKALMEDIGISESRRVRGLGQNQISALLTRFDK 104 >gi|18977764|ref|NP_579121.1| hypothetical protein PF1392 [Pyrococcus furiosus DSM 3638] gi|18893505|gb|AAL81516.1| hypothetical protein PF1392 [Pyrococcus furiosus DSM 3638] Length = 649 Score = 34.9 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 +VRAL IG S++ + I +R+V +L E E+ Sbjct: 175 IVRALAKNFSIGGLYSEETLLRAKIDKDRKVDELSEEEL 213 >gi|258508303|ref|YP_003171054.1| helicase [Lactobacillus rhamnosus GG] gi|257148230|emb|CAR87203.1| Helicase, RecD/TraA family protein [Lactobacillus rhamnosus GG] gi|259649619|dbj|BAI41781.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus GG] Length = 821 Score = 34.9 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 7 VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 V+ P K + + GIG K+++ I +KL + R+ L + E ++ Sbjct: 81 VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130 >gi|323359501|ref|YP_004225897.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] gi|323275872|dbj|BAJ76017.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum StLB037] Length = 274 Score = 34.9 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG S +I + P L E +V ++ Sbjct: 170 GIGNAYSDEILYAARLSPTAHASSLSEDDVTRL 202 >gi|312871405|ref|ZP_07731500.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 3008A-a] gi|311093058|gb|EFQ51407.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 3008A-a] Length = 780 Score = 34.9 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I ++ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|312872367|ref|ZP_07732437.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2062A-h1] gi|311092190|gb|EFQ50564.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2062A-h1] Length = 780 Score = 34.9 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I ++ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|89100042|ref|ZP_01172912.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] gi|89085276|gb|EAR64407.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911] Length = 275 Score = 34.9 bits (80), Expect = 4.1, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 21/35 (60%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I GIG S +IC++ + P R++ +L E E ++ Sbjct: 170 IAGIGNCYSDEICHQAGLLPMRKIEELSEMEKSRL 204 >gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864] Length = 985 Score = 34.9 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 18/38 (47%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 G+G + ++ + I PE+ + L ++ + I+ Sbjct: 248 GVGNWVADEVLYQAGIHPEQYTNTLSGEQLAALLDKIQ 285 >gi|255994850|ref|ZP_05427985.1| DNA ligase [Eubacterium saphenum ATCC 49989] gi|255993563|gb|EEU03652.1| DNA ligase [Eubacterium saphenum ATCC 49989] Length = 647 Score = 34.9 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR---QAIEQDYQVE---GDLRRTVAMN 77 GIG+ ++ I L ++ +L ++ I + + + + E +++R + Sbjct: 496 GIGYTNAGKIAAALGFDV-MKLFELTPEKINNIEGLGEVLTESFMAELSDENMKRRMREI 554 Query: 78 IKR 80 IKR Sbjct: 555 IKR 557 >gi|171185843|ref|YP_001794762.1| DNA topoisomerase VI subunit B [Thermoproteus neutrophilus V24Sta] gi|170935055|gb|ACB40316.1| DNA topoisomerase VI, B subunit [Thermoproteus neutrophilus V24Sta] Length = 530 Score = 34.9 bits (80), Expect = 4.2, Method: Composition-based stats. Identities = 5/38 (13%), Positives = 17/38 (44%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 +G +++ P + L E++++ + ++Q Sbjct: 263 VGEGTAKTFLEWAGFNPNAKATALTPEELVRLVEKMKQ 300 >gi|239623743|ref|ZP_04666774.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521774|gb|EEQ61640.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 424 Score = 34.9 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69 S + L + P +R + E E+ I + + +E + Sbjct: 154 MSSGVLKALNVDPNKRGDDMTEDELRTIVEVGHEKGVIESE 194 >gi|86741882|ref|YP_482282.1| putative integration host factor MihF [Frankia sp. CcI3] gi|86568744|gb|ABD12553.1| putative integration host factor MihF [Frankia sp. CcI3] Length = 105 Score = 34.5 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G +Q I +L I P RR+ L + + + Sbjct: 61 LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101 >gi|258539516|ref|YP_003174015.1| helicase, RecD/TraA family protein [Lactobacillus rhamnosus Lc 705] gi|257151192|emb|CAR90164.1| Helicase, RecD/TraA family protein [Lactobacillus rhamnosus Lc 705] Length = 821 Score = 34.5 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 7 VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 V+ P K + + GIG K+++ I +KL + R+ L + E ++ Sbjct: 81 VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130 >gi|229552099|ref|ZP_04440824.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus LMS2-1] gi|229314532|gb|EEN80505.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus LMS2-1] Length = 822 Score = 34.5 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 7 VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 V+ P K + + GIG K+++ I +KL + R+ L + E ++ Sbjct: 82 VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 131 >gi|187934958|ref|YP_001887219.1| radical SAM [Clostridium botulinum B str. Eklund 17B] gi|187723111|gb|ACD24332.1| SAM domain protein [Clostridium botulinum B str. Eklund 17B] Length = 437 Score = 34.5 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ-DYQV--EGDLRRTVA 75 L I GIG S++ I RRVH L ++ ++R +++ Y + +G ++ Sbjct: 334 LLRIPGIGVTSAKKIIKI------RRVHSLTFEDLKKLRVILKKSKYFITCDGKYYGNIS 387 Query: 76 MN---IKRLMDLGCYR 88 + IK + Y+ Sbjct: 388 FDDLIIKNKLLEDSYK 403 >gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Bacillus amyloliquefaciens TA208] Length = 276 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 12 AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 + V AL + G+G + + I PE + + L + ++ ++ I+ Q Sbjct: 156 NRAVKTALLDQKAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAI 215 Query: 69 DLRRT-VAMNIKRLMDLGCYRGLRH 92 D + V I ++G ++ LRH Sbjct: 216 DAGGSTVRSYINSQGEIGMFQ-LRH 239 >gi|317153157|ref|YP_004121205.1| helicase, RecD/TraA family [Desulfovibrio aespoeensis Aspo-2] gi|316943408|gb|ADU62459.1| helicase, RecD/TraA family [Desulfovibrio aespoeensis Aspo-2] Length = 736 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 6/63 (9%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTVAMNI 78 I G+G K++ + + V L++ + Q+ I ++ + + I Sbjct: 94 SIKGVGEKTATRLVEAFGVA----VLDLLDDDPEQLLSIKGISKNKLTDIIDSWSRQREI 149 Query: 79 KRL 81 K L Sbjct: 150 KNL 152 >gi|317502015|ref|ZP_07960199.1| DNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|316896695|gb|EFV18782.1| DNA ligase [Lachnospiraceae bacterium 8_1_57FAA] Length = 644 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 8/57 (14%) Query: 3 RIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 RI +P R++ +L I IG +++ IC L P +RV + E E+ I Sbjct: 473 RIENARKTTLP---RLIYSL-GIPNIGISNAKMICRALGEDP-KRVIRATEEELSAI 524 >gi|238063920|ref|ZP_04608629.1| hypothetical protein MCAG_04886 [Micromonospora sp. ATCC 39149] gi|237885731|gb|EEP74559.1| hypothetical protein MCAG_04886 [Micromonospora sp. ATCC 39149] Length = 105 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G ++ +V L + GIG + I KL I RR+ L E + + Sbjct: 48 GDDVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98 >gi|227510189|ref|ZP_03940238.1| Holliday junction DNA helicase RuvA [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227513117|ref|ZP_03943166.1| Holliday junction DNA helicase RuvA [Lactobacillus buchneri ATCC 11577] gi|227083692|gb|EEI19004.1| Holliday junction DNA helicase RuvA [Lactobacillus buchneri ATCC 11577] gi|227190394|gb|EEI70461.1| Holliday junction DNA helicase RuvA [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 198 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 16/61 (26%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE-----------SEVIQIRQAI 60 K V L G+G K++Q I + + +V L + + ++R AI Sbjct: 103 NKDVKF-LTKFPGVGKKTAQQII----LDLQGKVGDLSQIVQARSGQSASEQSDELRDAI 157 Query: 61 E 61 Sbjct: 158 S 158 >gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] gi|122266079|sp|Q03GC2|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus ATCC 25745] Length = 275 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR-RTVAMNIKR 80 I G+G + ++ I P++ + L + E+ +R++I ++ Q+ + + TV + Sbjct: 168 IAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFEELQLAIEAKGTTVFSYLNA 227 Query: 81 LMDLGCYRG---LRHRRGLPVRGQR 102 G ++ + HR+GLP QR Sbjct: 228 DGHAGSFQNQLHVYHRQGLPC--QR 250 >gi|302538173|ref|ZP_07290515.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] gi|302447068|gb|EFL18884.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C] Length = 286 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 27/88 (30%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------IQIRQAIEQDYQV-EGDLRR 72 I GIG S +I + + P + E +V +R+A+E+ + + DL+ Sbjct: 171 IAGIGNAYSDEILHAAKVSPFKLAASFDEEQVTHLYGAVRDTLREAVERAHGLAAQDLKA 230 Query: 73 TVAMNIKRLMDLGCYRGLRHRRGLPVRG 100 GL V G Sbjct: 231 EKKS------------------GLRVHG 240 >gi|296141029|ref|YP_003648272.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] gi|296029163|gb|ADG79933.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM 20162] Length = 290 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 10/82 (12%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + + P L E++ + A+ +++ + R+V ++ L Sbjct: 175 IAGIGNAYSDEILHTAKLSPFAGAKSLDEAQTDALYAAMHT--ELDDAVARSVGQHVATL 232 Query: 82 MDLGCYRGLRHRRGLPVRGQRT 103 R G+ V G RT Sbjct: 233 KAEK-------RSGMKVHG-RT 246 >gi|126175889|ref|YP_001052038.1| hypothetical protein Sbal_3695 [Shewanella baltica OS155] gi|125999094|gb|ABN63169.1| conserved hypothetical protein [Shewanella baltica OS155] Length = 320 Score = 34.5 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 14/67 (20%) Query: 3 RIAGV--NIPRAKRVVRALCYIHGIGFKSSQDICNKLA-IPPERRVHQLVESEVIQIRQA 59 IA V +P KR IG + +IC++L + + +L ES++ + + Sbjct: 7 YIAAVQRELPENKRQE--------IGRELKANICDQLDALSEQ---GELTESQIADVLKQ 55 Query: 60 IEQDYQV 66 + Y+V Sbjct: 56 MGHPYKV 62 >gi|254383482|ref|ZP_04998833.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] gi|194342378|gb|EDX23344.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1] Length = 286 Score = 34.5 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 9/67 (13%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------IQIRQAIEQDYQV-EGDLRR 72 I GIG S +I ++ + P + E +V +R+A+ + + V G L+ Sbjct: 171 IAGIGNAYSDEILHRAKVSPFKLAASFDEEQVTHLYGAVQDTLREAVARSHGVAAGRLKA 230 Query: 73 TVAMNIK 79 ++ Sbjct: 231 EKKSAMR 237 >gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM 7] gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens LL3] Length = 278 Score = 34.5 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 5/85 (5%) Query: 12 AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68 + V AL + G+G + + I PE + + L + ++ ++ I+ Q Sbjct: 158 NRAVKTALLDQKAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAI 217 Query: 69 DLRRT-VAMNIKRLMDLGCYRGLRH 92 D + V I ++G ++ LRH Sbjct: 218 DAGGSTVRSYINSQGEIGMFQ-LRH 241 >gi|220929383|ref|YP_002506292.1| Fibronectin-binding A domain protein [Clostridium cellulolyticum H10] gi|219999711|gb|ACL76312.1| Fibronectin-binding A domain protein [Clostridium cellulolyticum H10] Length = 592 Score = 34.5 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 8 NIPRAKRVV-RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 NI AK L + G + +DIC +P + + +L +S+ +I+ A+ + Sbjct: 185 NIKGAKHPEGLILNTVKGFSPYTCRDICASAGVPSKTPIGELNDSDKEKIKVALAK 240 >gi|325261872|ref|ZP_08128610.1| DNA ligase, NAD-dependent [Clostridium sp. D5] gi|324033326|gb|EGB94603.1| DNA ligase, NAD-dependent [Clostridium sp. D5] Length = 651 Score = 34.5 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 8/54 (14%) Query: 6 GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 +P ++V +L I IG +++ IC L P++ L E+ V ++ + Sbjct: 486 NTTLP---KLVYSL-GIANIGLANAKMICRALGNDPQK----LTEATVEELSEI 531 >gi|111224605|ref|YP_715399.1| integration host factor-like protein [Frankia alni ACN14a] gi|111152137|emb|CAJ63865.1| putative integration host factor-like protein (partial); putative coiled-coil domain [Frankia alni ACN14a] Length = 112 Score = 34.5 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G +Q I +L I P RR+ L + + + Sbjct: 68 LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 108 >gi|83590674|ref|YP_430683.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] gi|123524146|sp|Q2RHE9|FPG_MOOTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|83573588|gb|ABC20140.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Moorella thermoacetica ATCC 39073] Length = 274 Score = 34.5 bits (79), Expect = 4.7, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 GIG + ++ I P R L EV ++R A++ Sbjct: 171 GIGNIYADEMLFAAGIDPRRPAASLNHEEVARLRGAMQ 208 >gi|78185409|ref|YP_377844.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9902] gi|78169703|gb|ABB26800.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Synechococcus sp. CC9902] Length = 278 Score = 34.5 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I G+G + + IPP +L ++I++R + + + T + + L Sbjct: 173 IAGVGNIYADESLFAAGIPPLSPSGKLTIEQLIRLRDELVNVLHISIGVGGTTFSDFRDL 232 Query: 82 MDL-GCYRG----LRHRRGLPVR 99 + G Y G R R G P R Sbjct: 233 EGVNGNYGGQSWVYR-RSGQPCR 254 >gi|258650476|ref|YP_003199632.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] gi|258553701|gb|ACV76643.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita DSM 44233] Length = 294 Score = 34.5 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Query: 14 RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70 R+ L I G+G S +I + + P +L E+ ++ A+ + + Sbjct: 168 RIKNVLTDQRVIAGVGNAYSDEILHTARLSPFATAAKLSPDELDRLYDALAT--VLTDAV 225 Query: 71 RRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98 R+V RL GLR H R GLP Sbjct: 226 LRSVGGQAARLKGEKRT-GLRVHARTGLPC 254 >gi|227524332|ref|ZP_03954381.1| Holliday junction DNA helicase RuvA [Lactobacillus hilgardii ATCC 8290] gi|227088563|gb|EEI23875.1| Holliday junction DNA helicase RuvA [Lactobacillus hilgardii ATCC 8290] Length = 198 Score = 34.5 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 16/61 (26%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE-----------SEVIQIRQAI 60 K V L G+G K++Q I + + +V L + + ++R AI Sbjct: 103 NKDVKF-LTKFPGVGKKTAQQII----LDLQGKVGDLSQIVQARSGQSASEQSDELRDAI 157 Query: 61 E 61 Sbjct: 158 S 158 >gi|199598164|ref|ZP_03211586.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [Lactobacillus rhamnosus HN001] gi|199590925|gb|EDY99009.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [Lactobacillus rhamnosus HN001] Length = 821 Score = 34.5 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Query: 7 VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 V+ P K + + GIG K+++ I +KL + R+ L + E ++ Sbjct: 81 VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130 >gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023] Length = 273 Score = 34.5 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G + +IC K + PER + L + E+ +I Sbjct: 170 GVGNIYADEICFKAKVRPERAANSLSDKEINRI 202 >gi|83644837|ref|YP_433272.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] gi|83632880|gb|ABC28847.1| Formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396] Length = 302 Score = 34.5 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 11/64 (17%) Query: 4 IAGVNIP--------RAKRVVRALC--YIH-GIGFKSSQDICNKLAIPPERRVHQLVESE 52 I ++P + RAL +I G+G S +I + + P + +L E Sbjct: 136 ILEADLPAFQQALTRNNHTLKRALTDPHIFSGVGNAYSDEILHAARLSPIAQTQKLNAEE 195 Query: 53 VIQI 56 + ++ Sbjct: 196 IERL 199 >gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168] Length = 274 Score = 34.5 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 I G+G + + + I PER+ L +SE+ ++ AI + ++ Sbjct: 169 IAGLGNIYADEALFEAGISPERKADSLDDSEIERLYHAIRKVLKMG 214 >gi|34581344|ref|ZP_00142824.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] gi|28262729|gb|EAA26233.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246] Length = 273 Score = 34.5 bits (79), Expect = 4.9, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I GIG + + + I P++ + L + E+ + +AI Sbjct: 167 IVGIGNIYASESLHLARIHPDKSGNDLRDDEIENLIKAIRD 207 >gi|320528368|ref|ZP_08029530.1| helicase, RecD/TraA family [Solobacterium moorei F0204] gi|320131282|gb|EFW23850.1| helicase, RecD/TraA family [Solobacterium moorei F0204] Length = 730 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 23/69 (33%) Query: 3 RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------IPPER----RVHQLVESE 52 ++GVN P GIG K+++ + + L I + ++ L E + Sbjct: 89 YLSGVNFP-------------GIGKKTAERVVDALGEDCLTLIREDNTLLEKIGDLSERQ 135 Query: 53 VIQIRQAIE 61 + I + ++ Sbjct: 136 INAIIEGLQ 144 >gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM 2228] Length = 276 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68 I GIG + +I + AI P+R QL ESE I R+ +++ G Sbjct: 171 IAGIGNIYADEILFRAAILPDRTADQLSESEKEAIYYNMREILQKGIIYGG 221 >gi|284931593|gb|ADC31531.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. F] Length = 274 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 18/35 (51%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 GIG + +I I P ++ ++L + + +I + Sbjct: 171 GIGNIYADEILFLSKINPAKKANELTDQQFKEISK 205 >gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1] Length = 274 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + + I P R + L E+ +RQ I Sbjct: 167 KIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNI 206 >gi|91215880|ref|ZP_01252849.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] gi|91185857|gb|EAS72231.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC 700755] Length = 260 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 25/43 (58%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66 G+G + +I + I P ++V ++ ++++ + A+++ +V Sbjct: 166 GVGNWMADEILYQSKIHPTKKVIEMTDTDIKSVFDAMKKVIEV 208 >gi|28378223|ref|NP_785115.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257325|sp|Q88WV4|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|28271058|emb|CAD63963.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1] gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 274 Score = 34.5 bits (79), Expect = 5.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + + I P R + L E+ +RQ I Sbjct: 167 KIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNI 206 >gi|319955861|ref|YP_004167124.1| ribosomal protein l22 [Nitratifractor salsuginis DSM 16511] gi|319418265|gb|ADV45375.1| ribosomal protein L22 [Nitratifractor salsuginis DSM 16511] Length = 212 Score = 34.5 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 L I GIG Q N I V + + ++ +E+ Y +GD R +VA Sbjct: 150 LTKIKGIGKAYQQK-LNDEGIHTYEDVANMTDEQI----AMMEEKYSFKGDFRESVADAK 204 Query: 79 K 79 Sbjct: 205 N 205 >gi|312138559|ref|YP_004005895.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325676377|ref|ZP_08156056.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] gi|311887898|emb|CBH47210.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S] gi|325552938|gb|EGD22621.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707] Length = 288 Score = 34.5 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLM 82 GIG S +I + + P +L EV ++ A+ ++ + R+V RL Sbjct: 175 GIGNAYSDEILHAARLSPFATTSKLAPDEVDRLYDAMRA--ELSDAVERSVGQEAARLK 231 >gi|302866823|ref|YP_003835460.1| hypothetical protein Micau_2340 [Micromonospora aurantiaca ATCC 27029] gi|315503238|ref|YP_004082125.1| hypothetical protein ML5_2452 [Micromonospora sp. L5] gi|302569682|gb|ADL45884.1| hypothetical protein Micau_2340 [Micromonospora aurantiaca ATCC 27029] gi|315409857|gb|ADU07974.1| hypothetical protein ML5_2452 [Micromonospora sp. L5] Length = 105 Score = 34.5 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 ++ +V L + GIG + I KL I RR+ L E + + Sbjct: 50 DVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98 >gi|251780130|ref|ZP_04823050.1| SAM domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084445|gb|EES50335.1| SAM domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 437 Score = 34.5 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 12/76 (15%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQV--EGDLRRTVA 75 L I GIG S++ I RRVH+L ++ ++R + Y + +G ++ Sbjct: 334 LLRIPGIGVTSAKKIIK------TRRVHRLTFEDLKKLRVILKRSKYFITCDGKYYGNIS 387 Query: 76 MN---IKRLMDLGCYR 88 + IK + Y+ Sbjct: 388 FDDLIIKNKLLEESYK 403 >gi|229587037|ref|YP_002845538.1| formamidopyrimidine-DNA glycosylase [Rickettsia africae ESF-5] gi|259647149|sp|C3PLF5|FPG_RICAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|228022087|gb|ACP53795.1| Formamidopyrimidine-DNA glycosidase [Rickettsia africae ESF-5] Length = 273 Score = 34.5 bits (79), Expect = 5.1, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I GIG + + + I P++ + L + E+ + +AI Sbjct: 167 IVGIGNIYASESLHLARIHPDKSGNDLRDDEIENLIKAIRD 207 >gi|303233651|ref|ZP_07320305.1| flavoprotein family protein [Finegoldia magna BVS033A4] gi|302495085|gb|EFL54837.1| flavoprotein family protein [Finegoldia magna BVS033A4] Length = 400 Score = 34.5 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K + A+ I I K I I P ++V+++ + E +R+ I Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327 >gi|145594403|ref|YP_001158700.1| hypothetical protein Strop_1860 [Salinispora tropica CNB-440] gi|159037476|ref|YP_001536729.1| hypothetical protein Sare_1853 [Salinispora arenicola CNS-205] gi|330466973|ref|YP_004404716.1| hypothetical protein VAB18032_15020 [Verrucosispora maris AB-18-032] gi|145303740|gb|ABP54322.1| hypothetical protein Strop_1860 [Salinispora tropica CNB-440] gi|157916311|gb|ABV97738.1| conserved hypothetical protein [Salinispora arenicola CNS-205] gi|328809944|gb|AEB44116.1| hypothetical protein VAB18032_15020 [Verrucosispora maris AB-18-032] Length = 105 Score = 34.5 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 21/49 (42%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 ++ +V L + GIG + I KL I RR+ L E + + Sbjct: 50 DVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98 >gi|327439558|dbj|BAK15923.1| ATP-dependent exoDNAse alpha subunit [Solibacillus silvestris StLB046] Length = 833 Score = 34.5 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 10/54 (18%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ----------LVESEVIQIRQAIEQDYQVE 67 G+G K+++ I KL + ++ + L + + IRQ IE++ +E Sbjct: 110 GVGRKTAETIVEKLGMDALTKILEDPSALDAVPRLSAEKKLHIRQTIEENLGLE 163 >gi|296129695|ref|YP_003636945.1| hypothetical protein Cfla_1849 [Cellulomonas flavigena DSM 20109] gi|296021510|gb|ADG74746.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 103 Score = 34.5 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 L + G+G ++ I +++ I RRV L +V + Sbjct: 61 LESLPGVGKVKARAIMSEIGISETRRVRGLGPHQVKALVD 100 >gi|294660325|ref|NP_853016.2| formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284811982|gb|AAP56584.2| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(low)] gi|284930494|gb|ADC30433.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str. R(high)] Length = 274 Score = 34.5 bits (79), Expect = 5.2, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 18/35 (51%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 GIG + +I I P ++ ++L + + +I + Sbjct: 171 GIGNIYADEILFLSKINPAKKANELTDQQFKEISK 205 >gi|323490021|ref|ZP_08095242.1| exodeoxyribonuclease V-like protein [Planococcus donghaensis MPA1U2] gi|323396317|gb|EGA89142.1| exodeoxyribonuclease V-like protein [Planococcus donghaensis MPA1U2] Length = 805 Score = 34.5 bits (79), Expect = 5.3, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 10/80 (12%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQ----------LVESEVIQIRQAIEQDYQVEGDLR 71 +GIG K+++ I KL +++ + L + + IR ++ + +E + Sbjct: 106 FNGIGRKTAETIVKKLGKDAIKKILEDPDSLDKVPRLSDDKKDTIRATLQMNLGLERVMI 165 Query: 72 RTVAMNIKRLMDLGCYRGLR 91 + + + Y+ R Sbjct: 166 QLNDWGFGPQIGMRIYQAYR 185 >gi|309389010|gb|ADO76890.1| Fibronectin-binding A domain protein [Halanaerobium praevalens DSM 2228] Length = 583 Score = 34.5 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 23/44 (52%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 GIG S+++I + + P + L + E +I +++ + ++ Sbjct: 196 FRGIGPYSAREIVYRAQVDPAENYNSLSDLEKNKIAESMLKLFE 239 >gi|169824526|ref|YP_001692137.1| putative flavoprotein [Finegoldia magna ATCC 29328] gi|167831331|dbj|BAG08247.1| putative flavoprotein [Finegoldia magna ATCC 29328] Length = 400 Score = 34.5 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K + A+ I I K I I P ++V+++ + E +R+ I Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327 >gi|50119109|ref|YP_048276.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] gi|81693474|sp|Q6DAV4|FPG_ERWCT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|49609635|emb|CAG73068.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum SCRI1043] Length = 269 Score = 34.5 bits (79), Expect = 5.4, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 30/111 (27%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66 K VV G+G + + I P+R L E++ + + I+Q Q+ Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRAAGSLNENDADVLVRVIKQVLQLSIEQ 212 Query: 67 -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102 LR + + K +L Y G R G P R GQR Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTPIETAKHGQR 259 >gi|125973100|ref|YP_001037010.1| fibronectin-binding A-like protein [Clostridium thermocellum ATCC 27405] gi|281417295|ref|ZP_06248315.1| Fibronectin-binding A domain protein [Clostridium thermocellum JW20] gi|125713325|gb|ABN51817.1| Fibronectin-binding A-like protein [Clostridium thermocellum ATCC 27405] gi|281408697|gb|EFB38955.1| Fibronectin-binding A domain protein [Clostridium thermocellum JW20] gi|316940679|gb|ADU74713.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM 1313] Length = 588 Score = 34.5 bits (79), Expect = 5.5, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 L I G ++IC++ + P V L E + +++ +++ Sbjct: 197 LNNIKGFSPLLCEEICHRADVDPRLPVSSLSEDTIQNLKKVLKE 240 >gi|323497067|ref|ZP_08102090.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] gi|323317911|gb|EGA70899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase [Vibrio sinaloensis DSM 21326] Length = 269 Score = 34.5 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 7/52 (13%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 K VV G+G + + I P + QL E + + I+Q Sbjct: 159 DNKVVV-------GVGNIYANESLFSAGIHPTKAAGQLTERQWQLLVVEIKQ 203 >gi|302380629|ref|ZP_07269094.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3] gi|302311572|gb|EFK93588.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3] Length = 400 Score = 34.5 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 12 AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K + A+ I I K I I P ++V+++ + E +R+ I Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327 >gi|297196039|ref|ZP_06913437.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] gi|297153040|gb|EFH32113.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein [Streptomyces pristinaespiralis ATCC 25486] Length = 204 Score = 34.5 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 14 RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 RV AL + G+G + +I + + P RR +L ++E+ ++ Sbjct: 154 RVKAALTDQSVLAGLGNLLADEILWRAGLRPTRRADRLDDAELGRL 199 >gi|153813883|ref|ZP_01966551.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756] gi|331088166|ref|ZP_08337086.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA] gi|145848279|gb|EDK25197.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756] gi|330408822|gb|EGG88285.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA] Length = 653 Score = 34.5 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 8/57 (14%) Query: 3 RIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 RI +P R++ +L I IG +++ IC L P +RV + E E+ I Sbjct: 482 RIENARKTTLP---RLIYSL-GIPNIGISNAKMICRALGEDP-KRVIRATEEELSAI 533 >gi|220912308|ref|YP_002487617.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] gi|219859186|gb|ACL39528.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus A6] Length = 289 Score = 34.1 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN-IKR 80 I GIG S +I + I P L V + +AI + + G+ K Sbjct: 174 IAGIGNAYSDEILHAARISPFATAKSLDRETVQVLYEAI---HGILGEAMAEAQGKPPKD 230 Query: 81 LMDLGCYRGLRHRR-GLPV 98 L D+ H R GLP Sbjct: 231 LKDVKRSHMRVHARTGLPC 249 >gi|303234064|ref|ZP_07320713.1| putative fibronectin-binding protein [Finegoldia magna BVS033A4] gi|302494989|gb|EFL54746.1| putative fibronectin-binding protein [Finegoldia magna BVS033A4] Length = 578 Score = 34.1 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75 G S++IC + + R+ L + E + IR+ I +Y+ + Sbjct: 199 GFSPTISREICLRADLDYNIRLEDLNDEEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258 Query: 76 MNIKRLMDLGCY 87 + ++ L Y Sbjct: 259 LKDFHVIKLEKY 270 >gi|302380569|ref|ZP_07269034.1| putative fibronectin-binding protein [Finegoldia magna ACS-171-V-Col3] gi|302311512|gb|EFK93528.1| putative fibronectin-binding protein [Finegoldia magna ACS-171-V-Col3] Length = 578 Score = 34.1 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75 G S++IC + + R+ L + E + IR+ I +Y+ + Sbjct: 199 GFSPTISREICLRADLDYNIRLEDLNDEEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258 Query: 76 MNIKRLMDLGCY 87 + ++ L Y Sbjct: 259 LKDFHVIKLEKY 270 >gi|116670807|ref|YP_831740.1| putative integration host factor IHF [Arthrobacter sp. FB24] gi|116610916|gb|ABK03640.1| putative integration host factor IHF [Arthrobacter sp. FB24] Length = 116 Score = 34.1 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64 L + GIG ++ I ++L I RR+ L + + + +++ Sbjct: 61 LEAMPGIGRVTAAAIMDELGIAASRRLRGLGIHQRRALVDFMNENH 106 >gi|153855784|ref|ZP_01996785.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814] gi|149751911|gb|EDM61842.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814] Length = 647 Score = 34.1 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 RV+ +L I GIG +++ IC +L E + + E E+ +I Sbjct: 484 RVIYSL-GIAGIGLANAKVICRELKYDVESLLK-VSEEELNEI 524 >gi|153816142|ref|ZP_01968810.1| hypothetical protein RUMTOR_02390 [Ruminococcus torques ATCC 27756] gi|145846477|gb|EDK23395.1| hypothetical protein RUMTOR_02390 [Ruminococcus torques ATCC 27756] Length = 620 Score = 34.1 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 15 VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V +AL GI ++++IC I + + + + Sbjct: 231 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 273 >gi|309805354|ref|ZP_07699404.1| conserved domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165354|gb|EFO67587.1| conserved domain protein [Lactobacillus iners LactinV 09V1-c] Length = 271 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74 GIG K+++ I ++L ++ L + + + I ++ L + V Sbjct: 99 GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158 Query: 75 AMNIKRLMDL---GCYRG 89 I + + Y+G Sbjct: 159 QYGINKSIITDLYNKYKG 176 >gi|149922422|ref|ZP_01910855.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] gi|149816702|gb|EDM76193.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1] Length = 302 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 R + RAL + GIG S +I + + P + +L +E+ + Sbjct: 151 RNHTLKRALTDPRILDGIGNAYSDEILHAAKLSPIKWTSRLSAAEIEAL 199 >gi|255658379|ref|ZP_05403788.1| fibronectin/fibrinogen binding protein [Mitsuokella multacida DSM 20544] gi|260849710|gb|EEX69717.1| fibronectin/fibrinogen binding protein [Mitsuokella multacida DSM 20544] Length = 591 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 21/39 (53%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 G G S++++C + P R+ L E++ + A+++ Sbjct: 201 GFGPVSAKEVCFSAGLAPSMRIEALDEADFKAVENALQE 239 >gi|289582766|ref|YP_003481232.1| HhH-GPD family protein [Natrialba magadii ATCC 43099] gi|289532319|gb|ADD06670.1| HhH-GPD family protein [Natrialba magadii ATCC 43099] Length = 209 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 16/79 (20%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQIRQA 59 +AGV+ VV L I GIG +++ + + I P + L +R+ Sbjct: 108 LAGVD---NDEVVDRLTDIKGIGEWTARMYLLFVLERPDILP---LGDL------AVRRG 155 Query: 60 IEQDYQVEGDLRRTVAMNI 78 IEQ Y +L R +I Sbjct: 156 IEQLYSNGDELTRAEMRDI 174 >gi|153003378|ref|YP_001377703.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] gi|152026951|gb|ABS24719.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5] Length = 313 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + RAL + GIG S +I ++ + P + +L + E+ ++ Sbjct: 151 ENHTLKRALTDPSLLSGIGNAYSDEILHRARLSPVKLTSRLTDEELARL 199 >gi|158313548|ref|YP_001506056.1| integration host factor-like protein [Frankia sp. EAN1pec] gi|158108953|gb|ABW11150.1| putative integration host factor-like protein; putative coiled-coil domain [Frankia sp. EAN1pec] Length = 106 Score = 34.1 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G +Q I +L I P RR+ L + + + Sbjct: 61 LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101 >gi|288918226|ref|ZP_06412581.1| hypothetical protein FrEUN1fDRAFT_2277 [Frankia sp. EUN1f] gi|288350396|gb|EFC84618.1| hypothetical protein FrEUN1fDRAFT_2277 [Frankia sp. EUN1f] Length = 106 Score = 34.1 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G +Q I +L I P RR+ L + + + Sbjct: 61 LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101 >gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 269 Score = 34.1 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E Q+ + I Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202 >gi|184159399|ref|YP_001847738.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|294841648|ref|ZP_06786331.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6014059] gi|183210993|gb|ACC58391.1| Formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU] gi|323519338|gb|ADX93719.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii TCDC-AB0715] Length = 274 Score = 34.1 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|119492791|ref|ZP_01623877.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] gi|119452944|gb|EAW34116.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106] Length = 301 Score = 34.1 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83 G+G + + I P R +L +++ + + Q + D T N + Sbjct: 195 GVGNIYADETLFLSGISPTTRCAELTPAQIETLHAQLVQVLKTAIDAGGTTVRNFLNVAG 254 Query: 84 L-GCYRG---LRHRRGLPVR 99 + G Y G + +R G P R Sbjct: 255 VNGNYAGQAWVYNRAGQPCR 274 >gi|322509311|gb|ADX04765.1| mutM [Acinetobacter baumannii 1656-2] Length = 274 Score = 34.1 bits (78), Expect = 6.2, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|331089436|ref|ZP_08338335.1| hypothetical protein HMPREF1025_01918 [Lachnospiraceae bacterium 3_1_46FAA] gi|330404804|gb|EGG84342.1| hypothetical protein HMPREF1025_01918 [Lachnospiraceae bacterium 3_1_46FAA] Length = 580 Score = 34.1 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 15 VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V +AL GI ++++IC I + + + + Sbjct: 191 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 233 >gi|317500463|ref|ZP_07958687.1| fibronectin-binding protein [Lachnospiraceae bacterium 8_1_57FAA] gi|316898218|gb|EFV20265.1| fibronectin-binding protein [Lachnospiraceae bacterium 8_1_57FAA] Length = 580 Score = 34.1 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 15 VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V +AL GI ++++IC I + + + + Sbjct: 191 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 233 >gi|294637898|ref|ZP_06716167.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] gi|291088924|gb|EFE21485.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685] Length = 248 Score = 34.1 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E+ + Q I Sbjct: 139 DNKLVV-------GVGNIYASESLFSAQIHPDRLAGSLSRDEIALLVQTI 181 >gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus Ellin428] Length = 264 Score = 34.1 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%) Query: 15 VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 V AL G+G + +I + I P +L ++ I Sbjct: 157 VKAALLVQTAFPGVGNWMADEILWQARIDPRALCGKLSRKQIAAI 201 >gi|193078273|gb|ABO13237.2| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 274 Score = 34.1 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|126642855|ref|YP_001085839.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 17978] Length = 208 Score = 34.1 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 80 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 139 Query: 66 VEGDL 70 DL Sbjct: 140 SAIDL 144 >gi|150008625|ref|YP_001303368.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] gi|149937049|gb|ABR43746.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis ATCC 8503] Length = 277 Score = 34.1 bits (78), Expect = 6.6, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I G+G QDI I P+R++ L E ++ ++ Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205 >gi|302389581|ref|YP_003825402.1| Fibronectin-binding A domain protein [Thermosediminibacter oceani DSM 16646] gi|302200209|gb|ADL07779.1| Fibronectin-binding A domain protein [Thermosediminibacter oceani DSM 16646] Length = 584 Score = 34.1 bits (78), Expect = 6.7, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 17/33 (51%) Query: 30 SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 S++I + + + V +L E E +I + + + Sbjct: 214 SKEILFRSGVDANKLVSELTEEEKRKIAETLAK 246 >gi|327310398|ref|YP_004337295.1| DNA topoisomerase VI subunit B [Thermoproteus uzoniensis 768-20] gi|326946877|gb|AEA11983.1| DNA topoisomerase VI, B subunit [Thermoproteus uzoniensis 768-20] Length = 528 Score = 34.1 bits (78), Expect = 6.7, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 18/39 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 G+G ++ A+ P + V L + E++ + + + Sbjct: 260 FDGVGEGLARSFLEWAALDPNKPVGSLTQDEIVLLVEKM 298 >gi|170291097|ref|YP_001737913.1| RNA-binding protein, snRNP-like protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175177|gb|ACB08230.1| RNA-binding protein, snRNP-like protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 624 Score = 34.1 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 I G IP ++V + L + G+G ++ KL I E ++ L ++ ++ I Sbjct: 169 ILG-RIPPEEKVWKVLTGL-GLGPPYLNEVLLKLKIDAEVKISDL---DLEKLADEISD 222 >gi|312089245|ref|XP_003146172.1| hypothetical protein LOAG_10600 [Loa loa] gi|307758665|gb|EFO17899.1| hypothetical protein LOAG_10600 [Loa loa] Length = 403 Score = 34.1 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 1/47 (2%) Query: 32 DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78 ++ I E +L E ++ I IE + + +I Sbjct: 57 EVLEVAGIDIE-NSGELTEEQINTIMSLIEPSGSTQQHDLKQEQADI 102 >gi|255505426|ref|ZP_05346027.3| helicase, RecD/TraA family [Bryantella formatexigens DSM 14469] gi|255267960|gb|EET61165.1| helicase, RecD/TraA family [Bryantella formatexigens DSM 14469] Length = 1010 Score = 34.1 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 6/63 (9%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTVAMNIK 79 I G+G + +Q I K +++E+E+ ++R+ I + ++ IK Sbjct: 344 IKGVGPRFAQRIVRKFGTD----TIEVIENEIGRLREVEGIGEKRILQIKESWERQKEIK 399 Query: 80 RLM 82 +M Sbjct: 400 NVM 402 >gi|239501755|ref|ZP_04661065.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB900] Length = 274 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|169632504|ref|YP_001706240.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii SDF] gi|229464467|sp|B0VRV3|FPG_ACIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|169151296|emb|CAO99994.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii] Length = 274 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|78042786|ref|YP_359485.1| shikimate kinase/3-dehydroquinate synthase [Carboxydothermus hydrogenoformans Z-2901] gi|77994901|gb|ABB13800.1| shikimate kinase/3-dehydroquinate synthase [Carboxydothermus hydrogenoformans Z-2901] Length = 529 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 18/80 (22%) Query: 24 GI--GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY--------------QVE 67 GI G + I + + + + L E E +IR+ IE++Y ++ Sbjct: 432 GILHGEAVALGILWEAKLSKD--LGYLREEEWEKIREFIEKNYAYLKLSLNPDSLLVFMD 489 Query: 68 GDLRRTVAMNIKRLMDLGCY 87 D + + L +G Y Sbjct: 490 KDKKNREDIAFMLLKKIGEY 509 >gi|283833033|ref|ZP_06352774.1| protein UmuC [Citrobacter youngae ATCC 29220] gi|291070650|gb|EFE08759.1| protein UmuC [Citrobacter youngae ATCC 29220] Length = 421 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Query: 8 NIPRAKRVVRALC--YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 NI ++++ AL + G+G + S+ + + I + V +L ++++ IR+ Sbjct: 168 NIDHQRKLMAALSVDKVWGVGRRISKK-LDAMGI---KTVRELADTDIRFIRK 216 >gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22] gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55] Length = 269 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E Q+ + I Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202 >gi|225873334|ref|YP_002754793.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] gi|225793175|gb|ACO33265.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC 51196] Length = 298 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 4 IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53 IA V + ++V I G+G ++C + P RVH+L +V Sbjct: 155 IANVLL--NQQV------IAGLGNVFKSEVCFVCGLSPFARVHELSPDQV 196 >gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] gi|238066645|sp|B5XTG8|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342] Length = 269 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E Q+ + I Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202 >gi|154493758|ref|ZP_02033078.1| hypothetical protein PARMER_03099 [Parabacteroides merdae ATCC 43184] gi|154086508|gb|EDN85553.1| hypothetical protein PARMER_03099 [Parabacteroides merdae ATCC 43184] Length = 197 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 4/31 (12%) Query: 16 VRALCYIHGIGFKSSQDICNKLAIPPERRVH 46 AL + GIG K++Q I + + +V Sbjct: 106 ETALTSVKGIGLKTAQRIL----VDLKNKVK 132 >gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166215630|sp|A6TFM6|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 269 Score = 34.1 bits (78), Expect = 7.0, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E Q+ + I Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202 >gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae NTUH-K2044] gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3] Length = 269 Score = 34.1 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E Q+ + I Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202 >gi|293611034|ref|ZP_06693333.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826686|gb|EFF85052.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 274 Score = 34.1 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|163793016|ref|ZP_02186992.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] gi|159181662|gb|EDP66174.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199] Length = 300 Score = 34.1 bits (78), Expect = 7.1, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%) Query: 11 RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 + RAL GIG S +I + + P +L E E+ ++ Sbjct: 151 ENHTLKRALTDPHLFSGIGNAYSDEILHAAKLSPIALSQRLNEDEITRL 199 >gi|197117207|ref|YP_002137634.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] gi|197086567|gb|ACH37838.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem] Length = 261 Score = 34.1 bits (78), Expect = 7.2, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + +I + I P+ +L V + +AI Sbjct: 160 IGGIGNAYADEILWEARISPKSVAGKLPPEAVSALARAI 198 >gi|301309603|ref|ZP_07215545.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] gi|300832692|gb|EFK63320.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3] Length = 277 Score = 34.1 bits (78), Expect = 7.3, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I G+G QDI I P+R++ L E ++ ++ Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205 >gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 277 Score = 33.7 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + ++ + I P+ + L E ++ +R I Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANI 207 >gi|169794826|ref|YP_001712619.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|215482373|ref|YP_002324555.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] gi|294836836|ref|ZP_06781519.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6013113] gi|294857107|ref|ZP_06794876.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6013150] gi|301510336|ref|ZP_07235573.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB058] gi|169147753|emb|CAM85616.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE] gi|213988590|gb|ACJ58889.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB307-0294] Length = 274 Score = 33.7 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTLQQIEKLVVEIKRILK 205 Query: 66 VEGDL 70 DL Sbjct: 206 SAIDL 210 >gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 277 Score = 33.7 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG + ++ + I P+ + L E ++ +R I Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANI 207 >gi|117621626|ref|YP_853892.1| hypothetical protein BAPKO_2055 [Borrelia afzelii PKo] gi|218964028|ref|YP_002455464.1| P45-13 [Borrelia afzelii ACA-1] gi|110891012|gb|ABH02177.1| hypothetical protein BAPKO_2055 [Borrelia afzelii PKo] gi|216752919|gb|ACJ73533.1| P45-13 [Borrelia afzelii ACA-1] Length = 399 Score = 33.7 bits (77), Expect = 7.4, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%) Query: 32 DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 I + + L E ++ I + I+ Q+E D ++ + NI + Sbjct: 20 IISCNANMNTNDKNKALNEYKLQNISEVIKNSLQIESDFKKELEANINK 68 >gi|256004604|ref|ZP_05429582.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM 2360] gi|255991476|gb|EEU01580.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM 2360] Length = 275 Score = 33.7 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 L I G ++IC++ + P V L E + +++ +++ Sbjct: 197 LNNIKGFSPLLCEEICHRADVDPRLPVSSLSEDTIQNLKKVLKE 240 >gi|296122878|ref|YP_003630656.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] gi|296015218|gb|ADG68457.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM 3776] Length = 301 Score = 33.7 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68 G+G + +I ++ I P QL E ++ RQ +E Q EG Sbjct: 183 GVGNLYASEILHRAGISPLSASSQLHPEEWERLANAARQILELAIQYEG 231 >gi|160939139|ref|ZP_02086490.1| hypothetical protein CLOBOL_04033 [Clostridium bolteae ATCC BAA-613] gi|158438102|gb|EDP15862.1| hypothetical protein CLOBOL_04033 [Clostridium bolteae ATCC BAA-613] Length = 428 Score = 33.7 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 29 SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75 S + L + P++R + E E+ I + +E + R + Sbjct: 154 MSLIVLKVLHVDPDKRNDDITEDELRTIVDVGHEKGVIESEEREMIN 200 >gi|56696863|ref|YP_167225.1| 50S ribosomal protein L21/unknown domain fusion protein [Ruegeria pomeroyi DSS-3] gi|81676250|sp|Q5LRY0|RL21_SILPO RecName: Full=50S ribosomal protein L21 gi|56678600|gb|AAV95266.1| ribosomal protein L21 [Ruegeria pomeroyi DSS-3] Length = 193 Score = 33.7 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67 L I G+G +++ + I + L + ++ I + VE Sbjct: 138 LTKITGVGPAAAKKLVE-AGIGSFAALAALSDEQIAAIDAVKVKPEWVE 185 >gi|224593550|gb|ACN60046.1| recombination activating protein 1 [Trioceros balebicornutus] Length = 273 Score = 33.7 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 49 VESEVIQIRQAIEQD-YQVEGDLRRTVAMNIKRLMDL--GCYRGLRHRRGLPVRG 100 ++E+ +I Q + +D + + N++ L + G ++ H+R PV G Sbjct: 18 TDTELNKIIQTVNKDVFHLSQKEIENHQANLQHLCRICAGSFKSDAHKRSYPVHG 72 >gi|78355589|ref|YP_387038.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217994|gb|ABB37343.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 295 Score = 33.7 bits (77), Expect = 7.6, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 4/49 (8%) Query: 11 RAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55 ++ V+AL I G+G + + + I P+ R E + Sbjct: 171 ERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDEAER 219 >gi|219556809|ref|ZP_03535885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 160 Score = 33.7 bits (77), Expect = 7.7, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 45 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102 Query: 82 MDLGCYRGLRH--RRGLPV 98 GLR R GLP Sbjct: 103 KG-EKRSGLRVYARTGLPC 120 >gi|149186174|ref|ZP_01864488.1| hypothetical protein ED21_30594 [Erythrobacter sp. SD-21] gi|148830205|gb|EDL48642.1| hypothetical protein ED21_30594 [Erythrobacter sp. SD-21] Length = 155 Score = 33.7 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 L I G+G K + L + ++ ++E+ +I + Sbjct: 80 LTRIKGVGPKLAAT-LESLGVTSFAQIAAWDDAEIDRIDSQL 120 >gi|289568914|ref|ZP_06449141.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] gi|289542668|gb|EFD46316.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis T17] Length = 158 Score = 33.7 bits (77), Expect = 7.9, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81 I GIG S +I + I P +L +++ + +A+ + +RR+V L Sbjct: 43 IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 100 Query: 82 MDLGCYRGLRH--RRGLPV 98 GLR R GLP Sbjct: 101 KGEKR-SGLRVYARTGLPC 118 >gi|300088594|ref|YP_003759116.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528327|gb|ADJ26795.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 306 Score = 33.7 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 11 RAKRVVRALCYIHGIGFKSSQDI--CNKLAIPPERRVHQLVESEVIQIRQA 59 R K++ AL G+G + I + I PERR L E + +R+ Sbjct: 252 RRKQLANALSG--GLGADKANVIQYLKQAGIVPERRAETLSIDEWLALREV 300 >gi|189467099|ref|ZP_03015884.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] gi|189435363|gb|EDV04348.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM 17393] Length = 278 Score = 33.7 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESE 52 I G+G +QDI I P+++V L + + Sbjct: 170 QRIPGVGNGVTQDILFNAGIHPKQKVFDLSDGQ 202 >gi|145541229|ref|XP_001456303.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424114|emb|CAK88906.1| unnamed protein product [Paramecium tetraurelia] Length = 263 Score = 33.7 bits (77), Expect = 8.1, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 10/62 (16%) Query: 8 NIPRAKRVVRALCYIHGIGFKSSQDICNK---LAIPPERRVHQLVESEVIQIRQAIEQDY 64 N+P ++ GIG ++ + ++ + + + EV IR+ IE Y Sbjct: 4 NLPGKVALITGSTS--GIGLSVAKKLASQGVHIGLNGFAK-----PEEVAAIRKEIEGQY 56 Query: 65 QV 66 +V Sbjct: 57 KV 58 >gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 273 Score = 33.7 bits (77), Expect = 8.1, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 GIG + +IC + + PER + L E+ +I Sbjct: 170 GIGNIYADEICFEAKVQPERPANSLSNKEIKRI 202 >gi|297588329|ref|ZP_06946972.1| fibronectin-binding protein [Finegoldia magna ATCC 53516] gi|297573702|gb|EFH92423.1| fibronectin-binding protein [Finegoldia magna ATCC 53516] Length = 578 Score = 33.7 bits (77), Expect = 8.2, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 G S++IC + + RR+ L E+E ++ QA Sbjct: 199 GFSPTISREICLRADLDFNRRLEDLTENEKLRFNQA 234 >gi|19548890|gb|AAL90842.1|AF483983_1 UmuC protein [Escherichia coli] Length = 410 Score = 33.7 bits (77), Expect = 8.2, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 6/53 (11%) Query: 8 NIPRAKRVVRALC--YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58 N+ R ++++ AL + GIG ++S+ + + I + V L ++++ IR+ Sbjct: 168 NLERQRKLMSALSVDKVWGIGRRNSKK-LDAMGI---KTVLDLADTDIRFIRK 216 >gi|301166437|emb|CBW26013.1| formamidopyrimidine-DNA glycosylase [Bacteriovorax marinus SJ] Length = 270 Score = 33.7 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G G +IC + + P RR L + E+I++ Sbjct: 167 GTGNYIVNEICARAGVRPTRRNKSLTKDEIIKM 199 >gi|289422325|ref|ZP_06424175.1| fibronectin-binding protein [Peptostreptococcus anaerobius 653-L] gi|289157270|gb|EFD05885.1| fibronectin-binding protein [Peptostreptococcus anaerobius 653-L] Length = 588 Score = 33.7 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 I G+ +++IC +L I ++ + E+ +I + I Sbjct: 202 ILGLSPTVAREICYRLDIDKSMSSLEIGDGEIDRIIKEIN 241 >gi|260557193|ref|ZP_05829409.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] gi|260409299|gb|EEX02601.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC 19606] Length = 274 Score = 33.7 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 15 VVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70 + AL + G+G + + + I P + L ++ ++ I++ + DL Sbjct: 152 IKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILKSAIDL 210 >gi|269956005|ref|YP_003325794.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] gi|269304686|gb|ACZ30236.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica DSM 15894] Length = 298 Score = 33.7 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 10/83 (12%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80 I GIG S +I + P + +V ++ AI + G + + K Sbjct: 182 AIAGIGNAYSDEILHVARFSPFKLTRSFTPDDVARLHAAIVD--TLTGAVAASSGKPAKE 239 Query: 81 LMDLGCYRGLRHRRGLPVRGQRT 103 L D R G+ V G RT Sbjct: 240 LKDAK-------RAGMRVHG-RT 254 >gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] gi|188023541|gb|EDU61581.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827] Length = 269 Score = 33.7 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 K VV G+G + + I PE+ H L + I + Q I++ Q Sbjct: 160 DNKVVV-------GVGNIYANEALFAAGISPEKITHTLTLEQSIDLVQQIKKVLQ 207 >gi|154151277|ref|YP_001404895.1| DNA topoisomerase VI subunit B [Candidatus Methanoregula boonei 6A8] gi|153999829|gb|ABS56252.1| DNA topoisomerase VI, B subunit [Methanoregula boonei 6A8] Length = 600 Score = 33.7 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 21/37 (56%) Query: 25 IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61 +G K++Q++C++ + +V L E+ + A++ Sbjct: 263 VGKKTAQEMCDRAGLKVTAKVAGLSADELKNLLAAMQ 299 >gi|256841344|ref|ZP_05546851.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] gi|256737187|gb|EEU50514.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13] Length = 275 Score = 33.7 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 20 CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 I G+G QDI I P+R++ L E ++ ++ Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205 >gi|218282128|ref|ZP_03488427.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] gi|218216921|gb|EEC90459.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989] Length = 273 Score = 33.7 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 22/87 (25%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLRRTVAMNIK 79 GIG + +IC L + P R +L + + +I R+ ++ G Sbjct: 170 GIGNIYADEICFALGLDPRSRACKLSKKDCDKIVLETRRILQGATHYGGT---------- 219 Query: 80 RLMDLGCYR---GL--RHRRGLPVRGQ 101 + Y G+ R + L V Q Sbjct: 220 ---TIRSYTSSLGVTGRFQLHLKVHDQ 243 >gi|152977704|ref|YP_001343333.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] gi|171472905|sp|A6VKA1|FPG_ACTSZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|150839427|gb|ABR73398.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes 130Z] Length = 270 Score = 33.7 bits (77), Expect = 8.5, Method: Composition-based stats. Identities = 6/42 (14%), Positives = 22/42 (52%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 GIG + ++ + + PE+ ++ +++ + + I+++ Sbjct: 166 GIGNIYANEVLFQCGLHPEKPAGKITKTQAALLTETIKKELT 207 >gi|254574788|pdb|3A45|A Chain A, Crystal Structure Of Mvnei1_2 gi|254574789|pdb|3A45|B Chain B, Crystal Structure Of Mvnei1_2 gi|254574790|pdb|3A46|A Chain A, Crystal Structure Of Mvnei1THF COMPLEX gi|254574791|pdb|3A46|B Chain B, Crystal Structure Of Mvnei1THF COMPLEX Length = 289 Score = 33.7 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G +I + I P + L + E+ + Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202 >gi|254574787|pdb|3A42|A Chain A, Crystal Structure Of Mvnei1 Length = 295 Score = 33.7 bits (77), Expect = 8.6, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G +I + I P + L + E+ + Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202 >gi|301345445|ref|ZP_07226186.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056] gi|301595026|ref|ZP_07240034.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059] Length = 202 Score = 33.7 bits (77), Expect = 8.7, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 11 RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65 + K V AL + G+G + + + I P + L ++ ++ I++ + Sbjct: 74 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTLQQIEKLVVEIKRILK 133 Query: 66 VEGDL 70 DL Sbjct: 134 SAIDL 138 >gi|311977698|ref|YP_003986818.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|76363876|sp|Q5UQ00|FPG_MIMIV RecName: Full=Probable formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; Short=AP lyase gi|55416935|gb|AAV50585.1| formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] gi|308204334|gb|ADO18135.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga mimivirus] Length = 287 Score = 33.7 bits (77), Expect = 8.7, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 G+G +I + I P + L + E+ + Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202 >gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 33.7 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Query: 9 IPRAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ-- 62 + + K ++AL YI GIG + ++ I P + L + Q I+Q Sbjct: 164 LSKKKIAIKALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVI 223 Query: 63 DYQVEGDLRRTV 74 Y VE D ++ Sbjct: 224 QYAVEVDAECSL 235 >gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638] gi|166988461|sp|A4W514|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638] Length = 269 Score = 33.7 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E E + + I Sbjct: 160 DNKLVV-------GVGNIYASESLFAAGIHPDRLASSLSEQECEILVKVI 202 >gi|160933337|ref|ZP_02080725.1| hypothetical protein CLOLEP_02182 [Clostridium leptum DSM 753] gi|156867214|gb|EDO60586.1| hypothetical protein CLOLEP_02182 [Clostridium leptum DSM 753] Length = 628 Score = 33.7 bits (77), Expect = 9.0, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 18 ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63 +L I GIG ++ + + + + ++E+ ++ QA + Sbjct: 557 SLTSIPGIGPSRAKALLKSF-----KTIKNIAQAELKELEQAPSMN 597 >gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 276 Score = 33.7 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 I GIG + +IC L + PE +++ L + + ++ Q Sbjct: 169 IAGIGNIYADEICFALGMHPETKIYHLRKKDFERLLQE 206 >gi|315658134|ref|ZP_07911006.1| competence protein comEA [Staphylococcus lugdunensis M23590] gi|315496463|gb|EFU84786.1| competence protein comEA [Staphylococcus lugdunensis M23590] Length = 226 Score = 33.7 bits (77), Expect = 9.2, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 22/51 (43%), Gaps = 7/51 (13%) Query: 16 VRALCYIHGIGFKSSQDICNK-------LAIPPERRVHQLVESEVIQIRQA 59 +L + GIG +++I N ++ +++ + E +++Q Sbjct: 173 EASLTKVPGIGPSKAKEILNYKEQHGQFTSVDELKKIKGIGEKTFEKLKQY 223 >gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1] Length = 269 Score = 33.7 bits (77), Expect = 9.2, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 7/50 (14%) Query: 11 RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 K VV G+G + + I P+R L E ++ +AI Sbjct: 160 DNKLVV-------GVGNIYASESLFAAGIHPDRLASSLSADECERLVRAI 202 >gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum JL354] Length = 260 Score = 33.7 bits (77), Expect = 9.2, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLR 71 G+G S +I + AI P+R+ L +S++ I R + E D Sbjct: 167 GVGNLWSDEILYRTAIDPQRKGTDLSDSQLGDIYDAMRDILHAVVDTEADYS 218 >gi|313678500|ref|YP_004056240.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] gi|312950460|gb|ADR25055.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45] Length = 279 Score = 33.7 bits (77), Expect = 9.6, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 21 YIHGIGFKSSQDICNKLAIPPERRVH 46 YI GIG + +I I P +V+ Sbjct: 166 YILGIGNIYANEILYLSGINPWTKVN 191 >gi|317497366|ref|ZP_07955689.1| fibronectin-binding protein A [Lachnospiraceae bacterium 5_1_63FAA] gi|316895435|gb|EFV17594.1| fibronectin-binding protein A [Lachnospiraceae bacterium 5_1_63FAA] Length = 580 Score = 33.3 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 8/54 (14%) Query: 18 AL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVES-------EVIQIRQAIEQD 63 AL I G+ + ++C + + L + +++++ +E + Sbjct: 194 ALYTSITGMSPLIANELCYRAGLDGNASTDSLTDDSAAGLYGQLVKLNALVEDE 247 >gi|311742361|ref|ZP_07716170.1| integration host factor MihF [Aeromicrobium marinum DSM 15272] gi|311313989|gb|EFQ83897.1| integration host factor MihF [Aeromicrobium marinum DSM 15272] Length = 106 Score = 33.3 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 24/43 (55%) Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56 RV+ L + G+G +++I +++ I RR+ L +++ + Sbjct: 56 RVIDLLQSMPGVGKVRAREIMDRIGIADSRRLRGLGANQIQAL 98 >gi|91205062|ref|YP_537417.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157827633|ref|YP_001496697.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] gi|123388145|sp|Q1RJY6|FPG_RICBR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|166198741|sp|A8GXR0|FPG_RICB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|91068606|gb|ABE04328.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C] gi|157802937|gb|ABV79660.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389] Length = 273 Score = 33.3 bits (76), Expect = 9.6, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 18/39 (46%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62 G+G + + + I P++ L + E+ + A++ Sbjct: 169 GVGNIYASESLHLAKIHPDKFGKDLNDDEIKNLIAAVKN 207 >gi|225442888|ref|XP_002263635.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 403 Score = 33.3 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 9 IPRAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAI 60 + + K ++AL YI GIG + ++ I P + L I+Q I Sbjct: 164 LSKKKIAIKALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVI 223 Query: 61 EQDYQVEGD 69 E+ +V D Sbjct: 224 EKAMEVGAD 232 >gi|81300132|ref|YP_400340.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] gi|60416387|sp|Q08079|FPG_SYNP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gi|81169013|gb|ABB57353.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC 7942] Length = 282 Score = 33.3 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 18/37 (48%) Query: 24 GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 GIG + + + I P +L + + ++R+AI Sbjct: 177 GIGNIYADESLFRTGIHPTTPSDRLTKIQAEKLREAI 213 >gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4] gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue; AFUA_4G11930) [Aspergillus nidulans FGSC A4] Length = 363 Score = 33.3 bits (76), Expect = 9.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 19/39 (48%) Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60 I GIG +I I PE+ + L + +V ++ +I Sbjct: 190 ISGIGNWMGDEILYHAKIHPEQYSNTLTDDQVKELHSSI 228 >gi|312195550|ref|YP_004015611.1| integration host factor-like protein [Frankia sp. EuI1c] gi|311226886|gb|ADP79741.1| integration host factor-like protein [Frankia sp. EuI1c] Length = 106 Score = 33.3 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%) Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59 L + G+G +Q I +L I P RR+ L + + + Sbjct: 61 LEALPGVGRVRAQRIRERLGISPTRRLRGLGAKQRAALLEE 101 >gi|260548865|ref|ZP_05823087.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] gi|260408033|gb|EEX01504.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624] Length = 274 Score = 33.3 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 15 VVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70 + AL + G+G + + + I P + L ++ ++ I++ + DL Sbjct: 152 IKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVIEIKRILKSAIDL 210 >gi|167767305|ref|ZP_02439358.1| hypothetical protein CLOSS21_01824 [Clostridium sp. SS2/1] gi|167711280|gb|EDS21859.1| hypothetical protein CLOSS21_01824 [Clostridium sp. SS2/1] gi|291559387|emb|CBL38187.1| Predicted RNA-binding protein homologous to eukaryotic snRNP [butyrate-producing bacterium SSC/2] Length = 580 Score = 33.3 bits (76), Expect = 9.9, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 8/54 (14%) Query: 18 AL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVES-------EVIQIRQAIEQD 63 AL I G+ + ++C + + L + +++++ +E + Sbjct: 194 ALYTSITGMSPLIANELCYRAGLDGNASTDSLTDDSAAGLYGQLVKLNALVEDE 247 >gi|317129208|ref|YP_004095490.1| flagellar motor switch protein FliG [Bacillus cellulosilyticus DSM 2522] gi|315474156|gb|ADU30759.1| flagellar motor switch protein FliG [Bacillus cellulosilyticus DSM 2522] Length = 336 Score = 33.3 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 26 GFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDL 84 G + + + L +V L E E+ ++ I +V+ D + + +L Sbjct: 9 GREKAAILLISLGPDVSAKVYKHLSEEEIEKLTLEIAGVRKVDNDTKEDIVDQFHQLAMA 68 Query: 85 GCY 87 Y Sbjct: 69 QEY 71 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.317 0.198 0.718 Lambda K H 0.267 0.0606 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,079,298,525 Number of Sequences: 13984884 Number of extensions: 162189625 Number of successful extensions: 580011 Number of sequences better than 10.0: 3215 Number of HSP's better than 10.0 without gapping: 5233 Number of HSP's successfully gapped in prelim test: 399 Number of HSP's that attempted gapping in prelim test: 572028 Number of HSP's gapped (non-prelim): 5741 length of query: 122 length of database: 4,792,584,752 effective HSP length: 89 effective length of query: 33 effective length of database: 3,547,930,076 effective search space: 117081692508 effective search space used: 117081692508 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 77 (33.7 bits)