BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13
[Candidatus Liberibacter asiaticus str. psy62]
         (122 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039916|gb|ACT56712.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 122

 Score =  247 bits (630), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI
Sbjct: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR
Sbjct: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120

Query: 121 KR 122
           KR
Sbjct: 121 KR 122


>gi|315122796|ref|YP_004063285.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496198|gb|ADR52797.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 123

 Score =  206 bits (524), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 101/117 (86%), Positives = 104/117 (88%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVVRALCYIHGIGFKSSQDICNKL I PERRVH LVESE+I+IRQAI
Sbjct: 1   MARIAGVNIPSTKRVVRALCYIHGIGFKSSQDICNKLGISPERRVHHLVESEIIKIRQAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           EQ YQVEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNA TRK+ GKGG
Sbjct: 61  EQTYQVEGDLRRMTVMNIKRLMDLGCYRGLRHRRNLPVRGQRTRTNACTRKRSGKGG 117


>gi|241204187|ref|YP_002975283.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858077|gb|ACS55744.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 122

 Score =  186 bits (473), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGSKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|190891377|ref|YP_001977919.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652]
 gi|226712781|sp|B3PWU3|RS13_RHIE6 RecName: Full=30S ribosomal protein S13
 gi|190696656|gb|ACE90741.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652]
          Length = 122

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|209548957|ref|YP_002280874.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|218674113|ref|ZP_03523782.1| 30S ribosomal protein S13 [Rhizobium etli GR56]
 gi|218679851|ref|ZP_03527748.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 894]
 gi|226712782|sp|B5ZZ55|RS13_RHILW RecName: Full=30S ribosomal protein S13
 gi|209534713|gb|ACI54648.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 122

 Score =  185 bits (470), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|116251562|ref|YP_767400.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. viciae 3841]
 gi|158706271|sp|Q1MIB9|RS13_RHIL3 RecName: Full=30S ribosomal protein S13
 gi|115256210|emb|CAK07291.1| putative 30S ribosomal protein S13 (BS14) [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 122

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVAKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159184981|ref|NP_354901.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58]
 gi|32363355|sp|Q8UE39|RS13_AGRT5 RecName: Full=30S ribosomal protein S13
 gi|159140257|gb|AAK87686.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58]
          Length = 122

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 104/122 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ IP E+RVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGIPAEKRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|150396229|ref|YP_001326696.1| 30S ribosomal protein S13 [Sinorhizobium medicae WSM419]
 gi|166231926|sp|A6U881|RS13_SINMW RecName: Full=30S ribosomal protein S13
 gi|150027744|gb|ABR59861.1| ribosomal protein S13 [Sinorhizobium medicae WSM419]
          Length = 122

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86357327|ref|YP_469219.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42]
 gi|123512263|sp|Q2K9J4|RS13_RHIEC RecName: Full=30S ribosomal protein S13
 gi|86281429|gb|ABC90492.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42]
          Length = 122

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/122 (74%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15965131|ref|NP_385484.1| 30S ribosomal protein S13 [Sinorhizobium meliloti 1021]
 gi|307314381|ref|ZP_07593987.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C]
 gi|307322093|ref|ZP_07601469.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83]
 gi|32363377|sp|Q925X7|RS13_RHIME RecName: Full=30S ribosomal protein S13
 gi|15074311|emb|CAC45957.1| Probable 30S ribosomal protein S13 [Sinorhizobium meliloti 1021]
 gi|16588800|gb|AAL26899.1| ribosomal protein S13 [Sinorhizobium meliloti]
 gi|306892275|gb|EFN23085.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83]
 gi|306899079|gb|EFN29721.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C]
          Length = 122

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIIEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325293314|ref|YP_004279178.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3]
 gi|325061167|gb|ADY64858.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3]
          Length = 122

 Score =  182 bits (462), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 104/122 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ +P ++RVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGLPADKRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227821777|ref|YP_002825747.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234]
 gi|254811161|sp|C3MB01|RS13_RHISN RecName: Full=30S ribosomal protein S13
 gi|227340776|gb|ACP24994.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234]
          Length = 122

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K + +I  K+ IP +RRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAHEIVEKVGIPTDRRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319408743|emb|CBI82400.1| 30S ribosomal protein S13 [Bartonella schoenbuchensis R1]
          Length = 122

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I  K+ IP ERRVH+L+++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGRKFAQEIVEKVGIPSERRVHELLDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|13470573|ref|NP_102142.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099]
 gi|260468532|ref|ZP_05813699.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075]
 gi|32363384|sp|Q98N35|RS13_RHILO RecName: Full=30S ribosomal protein S13
 gi|14021315|dbj|BAB47928.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099]
 gi|259028688|gb|EEW29997.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075]
          Length = 122

 Score =  177 bits (450), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I +K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGKKFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222085697|ref|YP_002544227.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84]
 gi|254811120|sp|B9JDV0|RS13_AGRRK RecName: Full=30S ribosomal protein S13
 gi|221723145|gb|ACM26301.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84]
          Length = 122

 Score =  177 bits (448), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+IC K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALRYIHGIGPKFAQEICEKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGSYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222148388|ref|YP_002549345.1| 30S ribosomal protein S13 [Agrobacterium vitis S4]
 gi|254811121|sp|B9JVQ9|RS13_AGRVS RecName: Full=30S ribosomal protein S13
 gi|221735376|gb|ACM36339.1| 30S ribosomal protein S13 [Agrobacterium vitis S4]
          Length = 122

 Score =  176 bits (447), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ +  +RRVHQL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMEKVGLSADRRVHQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154253199|ref|YP_001414023.1| 30S ribosomal protein S13 [Parvibaculum lavamentivorans DS-1]
 gi|171769644|sp|A7HWT3|RS13_PARL1 RecName: Full=30S ribosomal protein S13
 gi|154157149|gb|ABS64366.1| ribosomal protein S13 [Parvibaculum lavamentivorans DS-1]
          Length = 122

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG   +++IC  + IP ERRV++L ++EVIQIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIHGIGNTKAKEICGTVGIPAERRVNELTDAEVIQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319783342|ref|YP_004142818.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169230|gb|ADV12768.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 122

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +Q+I +K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGKRFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154248693|ref|YP_001419651.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2]
 gi|226712806|sp|A7IPP8|RS13_XANP2 RecName: Full=30S ribosomal protein S13
 gi|154162778|gb|ABS69994.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2]
          Length = 122

 Score =  175 bits (444), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++++I  K+ IP ERRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKNAEEIVTKVGIPAERRVNQLTDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170738681|ref|YP_001767336.1| 30S ribosomal protein S13 [Methylobacterium sp. 4-46]
 gi|226712763|sp|B0UHU7|RS13_METS4 RecName: Full=30S ribosomal protein S13
 gi|168192955|gb|ACA14902.1| ribosomal protein S13 [Methylobacterium sp. 4-46]
          Length = 122

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|220921921|ref|YP_002497222.1| 30S ribosomal protein S13 [Methylobacterium nodulans ORS 2060]
 gi|254811155|sp|B8IT33|RS13_METNO RecName: Full=30S ribosomal protein S13
 gi|219946527|gb|ACL56919.1| ribosomal protein S13 [Methylobacterium nodulans ORS 2060]
          Length = 122

 Score =  174 bits (442), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163868628|ref|YP_001609837.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476]
 gi|189040491|sp|A9IVZ8|RS13_BART1 RecName: Full=30S ribosomal protein S13
 gi|161018284|emb|CAK01842.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476]
          Length = 122

 Score =  174 bits (442), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ IP  RRVH+L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITEKVGIPTGRRVHELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|144900906|emb|CAM77770.1| 30S ribosomal protein S13 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 125

 Score =  174 bits (442), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI GIG   + +IC KL+IP ERRV+QL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYITGIGRTKAAEICTKLSIPAERRVNQLTDDEVLKIREMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSDYTVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296445045|ref|ZP_06887006.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b]
 gi|296257466|gb|EFH04532.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b]
          Length = 122

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I  K+ IPPERRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAKKAQEIIEKVNIPPERRVAQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|110634008|ref|YP_674216.1| 30S ribosomal protein S13 [Mesorhizobium sp. BNC1]
 gi|123162300|sp|Q11HS4|RS13_MESSB RecName: Full=30S ribosomal protein S13
 gi|110284992|gb|ABG63051.1| SSU ribosomal protein S13P [Chelativorans sp. BNC1]
          Length = 122

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I +K+ IP +RRVHQL ++EV+ IR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163851602|ref|YP_001639645.1| ribosomal protein S13 [Methylobacterium extorquens PA1]
 gi|218530411|ref|YP_002421227.1| 30S ribosomal protein S13 [Methylobacterium chloromethanicum CM4]
 gi|240138770|ref|YP_002963242.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1]
 gi|254561370|ref|YP_003068465.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4]
 gi|226712759|sp|A9W4R8|RS13_METEP RecName: Full=30S ribosomal protein S13
 gi|254811154|sp|B7L0S8|RS13_METC4 RecName: Full=30S ribosomal protein S13
 gi|163663207|gb|ABY30574.1| ribosomal protein S13 [Methylobacterium extorquens PA1]
 gi|218522714|gb|ACK83299.1| ribosomal protein S13 [Methylobacterium chloromethanicum CM4]
 gi|240008739|gb|ACS39965.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1]
 gi|254268648|emb|CAX24607.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4]
          Length = 122

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319899077|ref|YP_004159170.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73]
 gi|319403041|emb|CBI76596.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73]
          Length = 122

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ + PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGQKFAQEIVEKVGVSPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|328543380|ref|YP_004303489.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1]
 gi|326413125|gb|ADZ70188.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1]
          Length = 122

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I +K+ I PERRV+QL +SEV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKFAQEIIDKVNIAPERRVNQLSDSEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319404403|emb|CBI78006.1| 30S ribosomal protein S13 [Bartonella rochalimae ATCC BAA-1498]
          Length = 122

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  K+ I PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIEKVGISPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|49475772|ref|YP_033813.1| 30S ribosomal protein S13 [Bartonella henselae str. Houston-1]
 gi|81647796|sp|Q6G2Y7|RS13_BARHE RecName: Full=30S ribosomal protein S13
 gi|49238579|emb|CAF27820.1| 30S ribosomal protein s13 [Bartonella henselae str. Houston-1]
          Length = 122

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ IP  RRVH+L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITKKVGIPIGRRVHELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|182679001|ref|YP_001833147.1| 30S ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226712696|sp|B2IF93|RS13_BEII9 RecName: Full=30S ribosomal protein S13
 gi|182634884|gb|ACB95658.1| ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 122

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +++IC K++IPPERRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKKAEEICEKVSIPPERRVVDLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|188581394|ref|YP_001924839.1| 30S ribosomal protein S13 [Methylobacterium populi BJ001]
 gi|226712761|sp|B1Z771|RS13_METPB RecName: Full=30S ribosomal protein S13
 gi|179344892|gb|ACB80304.1| ribosomal protein S13 [Methylobacterium populi BJ001]
          Length = 122

 Score =  173 bits (438), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|298291460|ref|YP_003693399.1| 30S ribosomal protein S13 [Starkeya novella DSM 506]
 gi|296927971|gb|ADH88780.1| 30S ribosomal protein S13 [Starkeya novella DSM 506]
          Length = 122

 Score =  172 bits (437), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKNAADIVEKVGIPLDRRVNQLTDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|323136109|ref|ZP_08071192.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242]
 gi|322399200|gb|EFY01719.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242]
          Length = 122

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++IC K+ IP ERRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEICEKVNIPAERRVAQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319407403|emb|CBI81054.1| 30S ribosomal protein S13 [Bartonella sp. 1-1C]
          Length = 122

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  ++ I PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGISPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163760822|ref|ZP_02167901.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
 gi|162281866|gb|EDQ32158.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
          Length = 126

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 5   MARIAGVNIPTNKRVIIALTYIHGIGNKFAAEIVEKVGIPLDRRVNQLSDAEVLQIRETI 64

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 65  DRDYQVEGDLRRENSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 124

Query: 121 KR 122
           K+
Sbjct: 125 KK 126


>gi|312115709|ref|YP_004013305.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220838|gb|ADP72206.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100]
          Length = 122

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YIHGIG K +++IC+K++IP ERRV++L ++E++QIR+ I
Sbjct: 1   MARIAGVNIPSNKRVEIGLRYIHGIGAKYAKEICDKVSIPVERRVNELSDAEILQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|299135235|ref|ZP_07028426.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2]
 gi|298590212|gb|EFI50416.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2]
          Length = 122

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGQKNAADIMEKVKIPLDRRVSQLSDAEVLQIREMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|240850813|ref|YP_002972213.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup]
 gi|240267936|gb|ACS51524.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup]
          Length = 122

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  ++ IP  RRVH+L ++EV+Q+R+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEIIERVGIPLGRRVHELSDAEVLQVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|121602910|ref|YP_989019.1| 30S ribosomal protein S13 [Bartonella bacilliformis KC583]
 gi|158706337|sp|A1USR6|RS13_BARBK RecName: Full=30S ribosomal protein S13
 gi|120615087|gb|ABM45688.1| ribosomal protein S13 [Bartonella bacilliformis KC583]
          Length = 122

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/111 (74%), Positives = 95/111 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+V AL YIHGIG K +  I  K+ IP ERRVH+L +SE++QIR+ I
Sbjct: 1   MARIAGVNIPTNKRLVIALQYIHGIGEKFAHKIIEKVGIPAERRVHELSDSEILQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++DYQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK
Sbjct: 61  DRDYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRK 111


>gi|319405876|emb|CBI79508.1| 30S ribosomal protein S13 [Bartonella sp. AR 15-3]
          Length = 122

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  ++ IP ERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGIPLERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254294418|ref|YP_003060441.1| ribosomal protein S13 [Hirschia baltica ATCC 49814]
 gi|254042949|gb|ACT59744.1| ribosomal protein S13 [Hirschia baltica ATCC 49814]
          Length = 122

 Score =  171 bits (433), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +Q+IC+K+ I  ERRV  L ++EVIQ+R+AI
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIHGIGPVKAQEICDKVGIAAERRVQDLSDAEVIQVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153009308|ref|YP_001370523.1| 30S ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188]
 gi|239832100|ref|ZP_04680429.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301]
 gi|166231914|sp|A6X0E0|RS13_OCHA4 RecName: Full=30S ribosomal protein S13
 gi|151561196|gb|ABS14694.1| ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188]
 gi|239824367|gb|EEQ95935.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301]
          Length = 122

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|209964062|ref|YP_002296977.1| ribosomal protein S13 [Rhodospirillum centenum SW]
 gi|226712783|sp|B6IRS8|RS13_RHOCS RecName: Full=30S ribosomal protein S13
 gi|209957528|gb|ACI98164.1| ribosomal protein S13 [Rhodospirillum centenum SW]
          Length = 122

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++IC K+ IP ERRVHQL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTQKRVEIALQYIHGIGAAKAKEICGKVGIPVERRVHQLTDDEVLRIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR VAMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSDYKVEGDLRREVAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|46202866|ref|ZP_00052474.2| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 125

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   + +I   L IP ERRV+QL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALTYIHGIGRAKATEITTSLGIPAERRVNQLTDDEVLKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+QVEGDLRR+VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK   K    +
Sbjct: 61  DRDFQVEGDLRRSVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300022563|ref|YP_003755174.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524384|gb|ADJ22853.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 125

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/111 (75%), Positives = 95/111 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K S++IC K +IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRVEIALRYIHGIGPKFSKEICAKCSIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++DY VEGDLRR V  NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DRDYTVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|254470460|ref|ZP_05083864.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062]
 gi|211960771|gb|EEA95967.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062]
          Length = 122

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV AL YIHGIG K +Q+I +K+ I  ERRV++L ++EV++IR+AI
Sbjct: 1   MARIAGVNLPTNKRVVIALQYIHGIGAKFAQEITDKVGIAAERRVNELSDAEVLKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEYTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|91977630|ref|YP_570289.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB5]
 gi|123762626|sp|Q134V1|RS13_RHOPS RecName: Full=30S ribosomal protein S13
 gi|91684086|gb|ABE40388.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB5]
          Length = 122

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAADIIEKVKIPVDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254719269|ref|ZP_05181080.1| 30S ribosomal protein S13 [Brucella sp. 83/13]
 gi|265984269|ref|ZP_06097004.1| ribosomal protein S13 [Brucella sp. 83/13]
 gi|306838020|ref|ZP_07470878.1| 30S ribosomal protein S13 [Brucella sp. NF 2653]
 gi|306840323|ref|ZP_07473095.1| 30S ribosomal protein S13 [Brucella sp. BO2]
 gi|306844114|ref|ZP_07476708.1| 30S ribosomal protein S13 [Brucella sp. BO1]
 gi|264662861|gb|EEZ33122.1| ribosomal protein S13 [Brucella sp. 83/13]
 gi|306275557|gb|EFM57289.1| 30S ribosomal protein S13 [Brucella sp. BO1]
 gi|306289722|gb|EFM60911.1| 30S ribosomal protein S13 [Brucella sp. BO2]
 gi|306406944|gb|EFM63165.1| 30S ribosomal protein S13 [Brucella sp. NF 2653]
          Length = 122

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296116711|ref|ZP_06835321.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769]
 gi|295976923|gb|EFG83691.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769]
          Length = 125

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 82/111 (73%), Positives = 95/111 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   +Q IC+KL+IP ERRV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIYGIGATKAQTICDKLSIPGERRVNELSDDEIVKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK
Sbjct: 61  DNDYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111


>gi|161610771|ref|NP_948567.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009]
 gi|192292014|ref|YP_001992619.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris TIE-1]
 gi|226712784|sp|B3QBV7|RS13_RHOPT RecName: Full=30S ribosomal protein S13
 gi|192285763|gb|ACF02144.1| ribosomal protein S13 [Rhodopseudomonas palustris TIE-1]
          Length = 122

 Score =  170 bits (430), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|158424156|ref|YP_001525448.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571]
 gi|158331045|dbj|BAF88530.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571]
          Length = 157

 Score =  170 bits (430), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRVV AL YIHGIG K +++I  K+ I  ERRV+QL ++EV+QIR+ I
Sbjct: 36  VARIAGVNIPTNKRVVIALQYIHGIGPKKAEEIVEKVGIAAERRVNQLTDAEVLQIRETI 95

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 96  DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 155

Query: 121 KR 122
           K+
Sbjct: 156 KK 157


>gi|161611321|ref|YP_162274.2| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761082|ref|ZP_04759171.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|260752952|ref|YP_003225845.1| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|91207635|sp|Q5NQ42|RS13_ZYMMO RecName: Full=30S ribosomal protein S13
 gi|241374701|gb|EER64162.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|258552315|gb|ACV75261.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|283775271|gb|AAV89163.2| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 122

 Score =  170 bits (430), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  +++ I  KL I PERRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|23012204|ref|ZP_00052348.1| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 136

 Score =  169 bits (429), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 15  LARIAGVNIPTGKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 74

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 75  DRDYVVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 134

Query: 121 KR 122
           K+
Sbjct: 135 KK 136


>gi|217979115|ref|YP_002363262.1| 30S ribosomal protein S13 [Methylocella silvestris BL2]
 gi|254811156|sp|B8EIT3|RS13_METSB RecName: Full=30S ribosomal protein S13
 gi|217504491|gb|ACK51900.1| ribosomal protein S13 [Methylocella silvestris BL2]
          Length = 122

 Score =  169 bits (429), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++IC K+ IP  RRV +L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGSKKAEEICAKVNIPDARRVSELTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|316933549|ref|YP_004108531.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1]
 gi|315601263|gb|ADU43798.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1]
          Length = 122

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|115525563|ref|YP_782474.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisA53]
 gi|122295429|sp|Q07KP0|RS13_RHOP5 RecName: Full=30S ribosomal protein S13
 gi|115519510|gb|ABJ07494.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisA53]
          Length = 122

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + DI  K+ IP +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|304391477|ref|ZP_07373419.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130]
 gi|303295706|gb|EFL90064.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130]
          Length = 122

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR V AL YIHGIG K++ +I  K  IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRTVIALQYIHGIGQKNANEIVTKANIPMERRVNQLTDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|288958719|ref|YP_003449060.1| small subunit ribosomal protein S13 [Azospirillum sp. B510]
 gi|288911027|dbj|BAI72516.1| small subunit ribosomal protein S13 [Azospirillum sp. B510]
          Length = 122

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YIHGIG   +++IC KL IP ERRV++L + EV++IR+ I
Sbjct: 1   MARIAGVNIPAQKRVEIGLTYIHGIGPFKAKEICAKLEIPAERRVNELTDDEVLKIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYRVEGDLRREVAMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170748612|ref|YP_001754872.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831]
 gi|226712762|sp|B1LWQ2|RS13_METRJ RecName: Full=30S ribosomal protein S13
 gi|170655134|gb|ACB24189.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831]
          Length = 122

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAKKAEEITQKVNIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLG YRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGAYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|92117120|ref|YP_576849.1| 30S ribosomal protein S13 [Nitrobacter hamburgensis X14]
 gi|122418085|sp|Q1QN08|RS13_NITHX RecName: Full=30S ribosomal protein S13
 gi|91800014|gb|ABE62389.1| SSU ribosomal protein S13P [Nitrobacter hamburgensis X14]
          Length = 122

 Score =  169 bits (427), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K++ +I +K+ IP +RRV QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIDKVKIPADRRVSQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|75675578|ref|YP_317999.1| 30S ribosomal protein S13 [Nitrobacter winogradskyi Nb-255]
 gi|85715108|ref|ZP_01046092.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A]
 gi|91207710|sp|Q3SSU4|RS13_NITWN RecName: Full=30S ribosomal protein S13
 gi|74420448|gb|ABA04647.1| SSU ribosomal protein S13P [Nitrobacter winogradskyi Nb-255]
 gi|85698023|gb|EAQ35896.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A]
          Length = 122

 Score =  169 bits (427), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K++ +I  K+ IP +RRV QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIEKVKIPADRRVSQLTDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|81562141|sp|Q6N4V5|RS13_RHOPA RecName: Full=30S ribosomal protein S13; AltName: Full=RRP-S13
 gi|39650146|emb|CAE28669.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009]
          Length = 128

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 7   VARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 67  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 126

Query: 121 KR 122
           K+
Sbjct: 127 KK 128


>gi|86749437|ref|YP_485933.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris HaA2]
 gi|123408223|sp|Q2IXN8|RS13_RHOP2 RecName: Full=30S ribosomal protein S13
 gi|86572465|gb|ABD07022.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris HaA2]
          Length = 122

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEIIEKVKIPVDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|17987062|ref|NP_539696.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|23502088|ref|NP_698215.1| 30S ribosomal protein S13 [Brucella suis 1330]
 gi|62290122|ref|YP_221915.1| 30S ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941]
 gi|82700045|ref|YP_414619.1| 30S ribosomal protein S13 [Brucella melitensis biovar Abortus 2308]
 gi|148560452|ref|YP_001259131.1| 30S ribosomal protein S13 [Brucella ovis ATCC 25840]
 gi|161619166|ref|YP_001593053.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365]
 gi|163843476|ref|YP_001627880.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445]
 gi|189024360|ref|YP_001935128.1| Ribosomal protein S13 [Brucella abortus S19]
 gi|225627682|ref|ZP_03785719.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo]
 gi|225852707|ref|YP_002732940.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457]
 gi|254689431|ref|ZP_05152685.1| 30S ribosomal protein S13 [Brucella abortus bv. 6 str. 870]
 gi|254693916|ref|ZP_05155744.1| 30S ribosomal protein S13 [Brucella abortus bv. 3 str. Tulya]
 gi|254697566|ref|ZP_05159394.1| 30S ribosomal protein S13 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701952|ref|ZP_05163780.1| 30S ribosomal protein S13 [Brucella suis bv. 5 str. 513]
 gi|254704496|ref|ZP_05166324.1| 30S ribosomal protein S13 [Brucella suis bv. 3 str. 686]
 gi|254706608|ref|ZP_05168436.1| 30S ribosomal protein S13 [Brucella pinnipedialis M163/99/10]
 gi|254710282|ref|ZP_05172093.1| 30S ribosomal protein S13 [Brucella pinnipedialis B2/94]
 gi|254730460|ref|ZP_05189038.1| 30S ribosomal protein S13 [Brucella abortus bv. 4 str. 292]
 gi|256031776|ref|ZP_05445390.1| 30S ribosomal protein S13 [Brucella pinnipedialis M292/94/1]
 gi|256044861|ref|ZP_05447765.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061291|ref|ZP_05451441.1| 30S ribosomal protein S13 [Brucella neotomae 5K33]
 gi|256113765|ref|ZP_05454569.1| 30S ribosomal protein S13 [Brucella melitensis bv. 3 str. Ether]
 gi|256159946|ref|ZP_05457664.1| 30S ribosomal protein S13 [Brucella ceti M490/95/1]
 gi|256255177|ref|ZP_05460713.1| 30S ribosomal protein S13 [Brucella ceti B1/94]
 gi|256257677|ref|ZP_05463213.1| 30S ribosomal protein S13 [Brucella abortus bv. 9 str. C68]
 gi|256263802|ref|ZP_05466334.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9]
 gi|256369635|ref|YP_003107145.1| 30S ribosomal protein S13 [Brucella microti CCM 4915]
 gi|260168910|ref|ZP_05755721.1| 30S ribosomal protein S13 [Brucella sp. F5/99]
 gi|260546670|ref|ZP_05822409.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038]
 gi|260565537|ref|ZP_05836021.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|260566260|ref|ZP_05836730.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40]
 gi|260754954|ref|ZP_05867302.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870]
 gi|260758170|ref|ZP_05870518.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292]
 gi|260761996|ref|ZP_05874339.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883963|ref|ZP_05895577.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68]
 gi|261214208|ref|ZP_05928489.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya]
 gi|261222373|ref|ZP_05936654.1| SSU ribosomal protein S13P [Brucella ceti B1/94]
 gi|261314067|ref|ZP_05953264.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10]
 gi|261317845|ref|ZP_05957042.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94]
 gi|261325298|ref|ZP_05964495.1| SSU ribosomal protein S13P [Brucella neotomae 5K33]
 gi|261752520|ref|ZP_05996229.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513]
 gi|261755179|ref|ZP_05998888.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686]
 gi|261758403|ref|ZP_06002112.1| SSU ribosomal protein S13P [Brucella sp. F5/99]
 gi|265988874|ref|ZP_06101431.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1]
 gi|265991288|ref|ZP_06103845.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995125|ref|ZP_06107682.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether]
 gi|265998338|ref|ZP_06110895.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1]
 gi|294852546|ref|ZP_06793219.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026]
 gi|297248517|ref|ZP_06932235.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196]
 gi|54039348|sp|P66382|RS13_BRUSU RecName: Full=30S ribosomal protein S13
 gi|54042120|sp|P66381|RS13_BRUME RecName: Full=30S ribosomal protein S13
 gi|75496693|sp|Q57CT0|RS13_BRUAB RecName: Full=30S ribosomal protein S13
 gi|91207690|sp|Q2YRT8|RS13_BRUA2 RecName: Full=30S ribosomal protein S13
 gi|158706216|sp|A5VQY4|RS13_BRUO2 RecName: Full=30S ribosomal protein S13
 gi|189040492|sp|A9M5M7|RS13_BRUC2 RecName: Full=30S ribosomal protein S13
 gi|189040493|sp|B0CH09|RS13_BRUSI RecName: Full=30S ribosomal protein S13
 gi|226712703|sp|B2S657|RS13_BRUA1 RecName: Full=30S ribosomal protein S13
 gi|254811133|sp|C0RJH8|RS13_BRUMB RecName: Full=30S ribosomal protein S13
 gi|17982719|gb|AAL51960.1| ssu ribosomal protein s13p [Brucella melitensis bv. 1 str. 16M]
 gi|23348047|gb|AAN30130.1| ribosomal protein S13 [Brucella suis 1330]
 gi|62196254|gb|AAX74554.1| RpsM, ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941]
 gi|82616146|emb|CAJ11189.1| Ribosomal protein S13 [Brucella melitensis biovar Abortus 2308]
 gi|148371709|gb|ABQ61688.1| ribosomal protein S13 [Brucella ovis ATCC 25840]
 gi|161335977|gb|ABX62282.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365]
 gi|163674199|gb|ABY38310.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445]
 gi|189019932|gb|ACD72654.1| Ribosomal protein S13 [Brucella abortus S19]
 gi|225617687|gb|EEH14732.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo]
 gi|225641072|gb|ACO00986.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457]
 gi|255999797|gb|ACU48196.1| 30S ribosomal protein S13 [Brucella microti CCM 4915]
 gi|260095720|gb|EEW79597.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038]
 gi|260151605|gb|EEW86699.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|260155778|gb|EEW90858.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40]
 gi|260668488|gb|EEX55428.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292]
 gi|260672428|gb|EEX59249.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675062|gb|EEX61883.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870]
 gi|260873491|gb|EEX80560.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68]
 gi|260915815|gb|EEX82676.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya]
 gi|260920957|gb|EEX87610.1| SSU ribosomal protein S13P [Brucella ceti B1/94]
 gi|261297068|gb|EEY00565.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94]
 gi|261301278|gb|EEY04775.1| SSU ribosomal protein S13P [Brucella neotomae 5K33]
 gi|261303093|gb|EEY06590.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10]
 gi|261738387|gb|EEY26383.1| SSU ribosomal protein S13P [Brucella sp. F5/99]
 gi|261742273|gb|EEY30199.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513]
 gi|261744932|gb|EEY32858.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686]
 gi|262552806|gb|EEZ08796.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1]
 gi|262766238|gb|EEZ12027.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether]
 gi|263002072|gb|EEZ14647.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093930|gb|EEZ17864.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9]
 gi|264661071|gb|EEZ31332.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1]
 gi|294821135|gb|EFG38134.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026]
 gi|297175686|gb|EFH35033.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196]
 gi|326409232|gb|ADZ66297.1| Ribosomal protein S13 [Brucella melitensis M28]
 gi|326538940|gb|ADZ87155.1| 30S ribosomal protein S13 [Brucella melitensis M5-90]
          Length = 122

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|209884835|ref|YP_002288692.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5]
 gi|209873031|gb|ACI92827.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5]
          Length = 125

 Score =  168 bits (425), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV QL + EV+QIR+ I
Sbjct: 4   VARIAGVNIPTNKRVIIALQYIHGIGQKNAADIVEKVKIPLDRRVSQLTDQEVLQIREII 63

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 64  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 123

Query: 121 KR 122
           K+
Sbjct: 124 KK 125


>gi|83858544|ref|ZP_00952066.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633]
 gi|83853367|gb|EAP91219.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633]
          Length = 122

 Score =  167 bits (424), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   + +IC K+ IP E+RV QL ++E++QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIHGIGPAMAAEICEKVGIPAEKRVSQLTDAEILQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR VA+N+KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYTVEGDLRREVAVNVKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|237815630|ref|ZP_04594627.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A]
 gi|237788928|gb|EEP63139.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A]
          Length = 175

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 54  VARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 113

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 114 DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 173

Query: 121 KR 122
           K+
Sbjct: 174 KK 175


>gi|162139877|ref|YP_744397.2| 30S ribosomal protein S13 [Granulibacter bethesdensis CGDNIH1]
 gi|158706371|sp|Q0BUM8|RS13_GRABC RecName: Full=30S ribosomal protein S13
          Length = 125

 Score =  167 bits (422), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 81/111 (72%), Positives = 96/111 (86%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  +L YI+GIG   +Q IC +L+IP ERRV+QL + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111


>gi|254714279|ref|ZP_05176090.1| 30S ribosomal protein S13 [Brucella ceti M644/93/1]
 gi|254717716|ref|ZP_05179527.1| 30S ribosomal protein S13 [Brucella ceti M13/05/1]
 gi|261219559|ref|ZP_05933840.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1]
 gi|261322054|ref|ZP_05961251.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1]
 gi|260924648|gb|EEX91216.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1]
 gi|261294744|gb|EEX98240.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1]
          Length = 122

 Score =  166 bits (420), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV++IR+AI
Sbjct: 1   MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254503181|ref|ZP_05115332.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11]
 gi|222439252|gb|EEE45931.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11]
          Length = 126

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRVV AL YIHGIG K +Q+I  K +I   RRV++L ++EV+QIR+ I
Sbjct: 5   VARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIVEKNSIDAARRVNELSDAEVLQIRETI 64

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 65  DRDYMVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 124

Query: 121 KR 122
           K+
Sbjct: 125 KK 126


>gi|27380489|ref|NP_772018.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110]
 gi|32363304|sp|Q89JA6|RS13_BRAJA RecName: Full=30S ribosomal protein S13
 gi|27353653|dbj|BAC50643.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110]
          Length = 122

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ IP +RRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|58038833|ref|YP_190797.1| 30S ribosomal protein S13 [Gluconobacter oxydans 621H]
 gi|81352519|sp|Q5FU05|RS13_GLUOX RecName: Full=30S ribosomal protein S13
 gi|58001247|gb|AAW60141.1| SSU ribosomal protein S13P [Gluconobacter oxydans 621H]
          Length = 125

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 94/111 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL Y++GIG  ++Q ICNKL IP  +RV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALRYVYGIGPSTAQSICNKLEIPDAKRVNELSDDEIVKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + +VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DSELRVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111


>gi|114315414|gb|ABI61474.1| SSU ribosomal protein S13P [Granulibacter bethesdensis CGDNIH1]
          Length = 137

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/111 (72%), Positives = 96/111 (86%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  +L YI+GIG   +Q IC +L+IP ERRV+QL + E+++IR+ I
Sbjct: 13  VARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 72

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 73  DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 123


>gi|162149152|ref|YP_001603613.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545104|ref|YP_002277333.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
 gi|189044278|sp|A9H3J7|RS13_GLUDA RecName: Full=30S ribosomal protein S13
 gi|161787729|emb|CAP57325.1| putative 30S ribosomal protein S13 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532781|gb|ACI52718.1| ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 125

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/111 (71%), Positives = 94/111 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YI+GIG   +++IC +L IP ERRV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIGLRYIYGIGETKAEEICRRLEIPAERRVNELSDDEILKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DSEYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111


>gi|162136028|ref|YP_533285.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB18]
 gi|158706368|sp|Q211H0|RS13_RHOPB RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ I  ++RV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307294933|ref|ZP_07574775.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1]
 gi|306879407|gb|EFN10625.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1]
          Length = 122

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ D+ +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDLADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|90417745|ref|ZP_01225657.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1]
 gi|90337417|gb|EAS51068.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1]
          Length = 122

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG   ++DI  K+ +  ERRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAAHAKDIVKKVNLGDERRVNDLTDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY+VEGDLRR  AMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYRVEGDLRRETAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114570323|ref|YP_757003.1| 30S ribosomal protein S13 [Maricaulis maris MCS10]
 gi|122315803|sp|Q0ANS2|RS13_MARMM RecName: Full=30S ribosomal protein S13
 gi|114340785|gb|ABI66065.1| SSU ribosomal protein S13P [Maricaulis maris MCS10]
          Length = 122

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++IC +++I PERRV +L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVEIALRYIHGIGPAKAKEICEQVSILPERRVSELTDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+QVEGDLRR VA+NIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDHQVEGDLRREVAVNIKRLMDLGNYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|49474382|ref|YP_032424.1| 30S ribosomal protein S13 [Bartonella quintana str. Toulouse]
 gi|81646970|sp|Q6FZE4|RS13_BARQU RecName: Full=30S ribosomal protein S13
 gi|49239886|emb|CAF26284.1| 30s ribosomal protein s13 [Bartonella quintana str. Toulouse]
          Length = 122

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +Q+I  K+ IP  RRV +L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPRFAQEITKKVGIPVGRRVCELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y+VEGDLRR VA+N+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYKVEGDLRREVAVNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294010567|ref|YP_003544027.1| ribosomal protein S13 [Sphingobium japonicum UT26S]
 gi|292673897|dbj|BAI95415.1| ribosomal protein S13 [Sphingobium japonicum UT26S]
          Length = 122

 Score =  164 bits (415), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI +KL I   RRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHSRRVQDLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329889149|ref|ZP_08267492.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568]
 gi|328844450|gb|EGF94014.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568]
          Length = 122

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  ++++I  K+ I P RRV+QL ++E++QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVEIALQYIHGIGAHNAKEITAKIGIEPARRVNQLTDAEILQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|16125519|ref|NP_420083.1| 30S ribosomal protein S13 [Caulobacter crescentus CB15]
 gi|221234265|ref|YP_002516701.1| 30S ribosomal protein S13 [Caulobacter crescentus NA1000]
 gi|32363389|sp|Q9A8T1|RS13_CAUCR RecName: Full=30S ribosomal protein S13
 gi|254811137|sp|B8H4F6|RS13_CAUCN RecName: Full=30S ribosomal protein S13
 gi|13422603|gb|AAK23251.1| ribosomal protein S13 [Caulobacter crescentus CB15]
 gi|220963437|gb|ACL94793.1| SSU ribosomal protein S13P [Caulobacter crescentus NA1000]
          Length = 122

 Score =  164 bits (414), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS+++I  K+ I   RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|162139937|ref|YP_001261831.2| 30S ribosomal protein S13 [Sphingomonas wittichii RW1]
          Length = 122

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++I  KL I P+RRV  L + EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|330993870|ref|ZP_08317802.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1]
 gi|329759138|gb|EGG75650.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1]
          Length = 125

 Score =  163 bits (413), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 80/111 (72%), Positives = 93/111 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   +Q IC++L IP ERRV++L + E+ +IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIYGIGATKAQAICDQLEIPAERRVNELSDDEIGKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK
Sbjct: 61  DSNYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111


>gi|114800366|ref|YP_761507.1| 30S ribosomal protein S13 [Hyphomonas neptunium ATCC 15444]
 gi|123027743|sp|Q0BYD6|RS13_HYPNA RecName: Full=30S ribosomal protein S13
 gi|114740540|gb|ABI78665.1| ribosomal protein S13 [Hyphomonas neptunium ATCC 15444]
          Length = 122

 Score =  163 bits (413), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   S++IC K+ + P RRV+QL ++EVI+IR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALRYIHGIGPSFSKEICEKVGVEPSRRVNQLTDAEVIKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR  +MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRKKLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|103486060|ref|YP_615621.1| 30S ribosomal protein S13 [Sphingopyxis alaskensis RB2256]
 gi|123380095|sp|Q1GVN4|RS13_SPHAL RecName: Full=30S ribosomal protein S13
 gi|98976137|gb|ABF52288.1| SSU ribosomal protein S13P [Sphingopyxis alaskensis RB2256]
          Length = 122

 Score =  163 bits (413), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV+ AL YIHGIG K++ DI +KL I   RRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNLPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHGRRVQDLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRNTAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|90106929|gb|ABD88966.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB18]
          Length = 148

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ I  ++RV+QL + EV+QIR+ I
Sbjct: 27  VARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 86

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 87  DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 146

Query: 121 KR 122
           K+
Sbjct: 147 KK 148


>gi|307946309|ref|ZP_07661644.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
 gi|307769973|gb|EFO29199.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
          Length = 122

 Score =  163 bits (412), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K  I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKFAQEIVEKNNIDAARRVNELSDAEVLSIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163796897|ref|ZP_02190854.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199]
 gi|159177886|gb|EDP62435.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199]
          Length = 122

 Score =  163 bits (412), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 97/122 (79%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVNIP  KRVV AL YIHGIG  ++  IC+ + +P ERRVH+L E E+ ++R++I
Sbjct: 1   MARISGVNIPTQKRVVIALTYIHGIGRTTASRICSSVGVPAERRVHELTEDELSRLRESI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AM+IKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K  +A 
Sbjct: 61  DADLIVEGDLRRQTAMSIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAK-AIAG 119

Query: 121 KR 122
           KR
Sbjct: 120 KR 121


>gi|167645600|ref|YP_001683263.1| 30S ribosomal protein S13 [Caulobacter sp. K31]
 gi|189040494|sp|B0T2E4|RS13_CAUSK RecName: Full=30S ribosomal protein S13
 gi|167348030|gb|ABZ70765.1| ribosomal protein S13 [Caulobacter sp. K31]
          Length = 122

 Score =  163 bits (412), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS++DI  K+ I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSARDIVTKVGIDDARRVNQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DKDFTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|118591159|ref|ZP_01548558.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614]
 gi|118436235|gb|EAV42877.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614]
          Length = 126

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRVV AL YIHGIG K +Q+I  K  I   RRV++L ++EV+ IR+ I
Sbjct: 5   VARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIIEKNNIDAARRVNELSDAEVLSIRETI 64

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 65  DRDYLVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 124

Query: 121 KR 122
           K+
Sbjct: 125 KK 126


>gi|94496223|ref|ZP_01302801.1| ribosomal protein S13 [Sphingomonas sp. SKA58]
 gi|94424402|gb|EAT09425.1| ribosomal protein S13 [Sphingomonas sp. SKA58]
          Length = 122

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRHTAVSIADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148499439|gb|ABQ67693.1| SSU ribosomal protein S13P [Sphingomonas wittichii RW1]
          Length = 137

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  AL YIHGIG   +++I  KL I P+RRV  L + EV+QIR+AI
Sbjct: 16  VARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 75

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 76  DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 135

Query: 121 KR 122
           K+
Sbjct: 136 KK 137


>gi|197104718|ref|YP_002130095.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1]
 gi|196478138|gb|ACG77666.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1]
          Length = 129

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRVV AL YIHGIG   +++I NK+ I   RRV+QL + EV+QIR+ I
Sbjct: 8   VARIAGVNIPTNKRVVIALQYIHGIGAAKAREIVNKVGIEDARRVNQLTDQEVLQIRETI 67

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  A+NIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 68  DRDYMVEGDLRRDTAVNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 127

Query: 121 KR 122
           K+
Sbjct: 128 KK 129


>gi|295688928|ref|YP_003592621.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756]
 gi|295430831|gb|ADG10003.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756]
          Length = 122

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS+++I  K+ I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255262793|ref|ZP_05342135.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62]
 gi|255105128|gb|EET47802.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62]
          Length = 122

 Score =  161 bits (408), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL Y+ GIG  S+Q IC  + I P RRV++L ++EV+++R+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYVTGIGTTSAQKICEAVGIDPTRRVNELSDAEVLKVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENYTVEGDLRREATMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254421006|ref|ZP_05034730.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3]
 gi|196187183|gb|EDX82159.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3]
          Length = 133

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  AL YIHGIG  +++DI  K+ I P RRV+QL ++EV+ IR+ I
Sbjct: 12  VARIAGVNIPTNKRVEIALQYIHGIGPAAAKDITEKVGIEPARRVNQLTDAEVLSIRETI 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 72  DKDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|148256370|ref|YP_001240955.1| 30S ribosomal protein S13 [Bradyrhizobium sp. BTAi1]
 gi|158706214|sp|A5ELK5|RS13_BRASB RecName: Full=30S ribosomal protein S13
 gi|146408543|gb|ABQ37049.1| SSU ribosomal protein S13P [Bradyrhizobium sp. BTAi1]
          Length = 122

 Score =  161 bits (407), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ I  +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGPKIASEIIEKVKIAEDRRVNQLSDQEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|332186879|ref|ZP_08388621.1| 30S ribosomal protein S13 [Sphingomonas sp. S17]
 gi|332013212|gb|EGI55275.1| 30S ribosomal protein S13 [Sphingomonas sp. S17]
          Length = 122

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   +++I  KL I  +RRV  L + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGPAKAKEITAKLNIAADRRVQDLSDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|87200542|ref|YP_497799.1| 30S ribosomal protein S13 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488705|sp|Q2G5A8|RS13_NOVAD RecName: Full=30S ribosomal protein S13
 gi|87136223|gb|ABD26965.1| SSU ribosomal protein S13P [Novosphingobium aromaticivorans DSM
           12444]
          Length = 122

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   ++ I +KL I   RRV  L ++E++QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGSFKAKQIADKLGIDHSRRVQDLSDAEILQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEHTVEGDLRREVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|110678752|ref|YP_681759.1| 30S ribosomal protein S13 [Roseobacter denitrificans OCh 114]
 gi|122972937|sp|Q16AC0|RS13_ROSDO RecName: Full=30S ribosomal protein S13
 gi|109454868|gb|ABG31073.1| ribosomal protein S13 [Roseobacter denitrificans OCh 114]
          Length = 122

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254466762|ref|ZP_05080173.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I]
 gi|206687670|gb|EDZ48152.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I]
          Length = 122

 Score =  160 bits (405), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC+ + I P RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICDAVGIDPTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|146340079|ref|YP_001205127.1| 30S ribosomal protein S13 [Bradyrhizobium sp. ORS278]
 gi|158706215|sp|A4YSL4|RS13_BRASO RecName: Full=30S ribosomal protein S13
 gi|146192885|emb|CAL76890.1| 30S ribosomal subunit protein S13 [Bradyrhizobium sp. ORS278]
          Length = 122

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ I  +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGPKIAGEIIEKVKIAEDRRVNQLSDQEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|315497995|ref|YP_004086799.1| 30S ribosomal protein s13 [Asticcacaulis excentricus CB 48]
 gi|315416007|gb|ADU12648.1| 30S ribosomal protein S13 [Asticcacaulis excentricus CB 48]
          Length = 122

 Score =  160 bits (405), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +++I  K+ I   RRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQQKAKEIVEKVGIEDARRVNSLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148260917|ref|YP_001235044.1| 30S ribosomal protein S13 [Acidiphilium cryptum JF-5]
 gi|326404315|ref|YP_004284397.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301]
 gi|166231896|sp|A5FZU3|RS13_ACICJ RecName: Full=30S ribosomal protein S13
 gi|146402598|gb|ABQ31125.1| SSU ribosomal protein S13P [Acidiphilium cryptum JF-5]
 gi|325051177|dbj|BAJ81515.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301]
          Length = 125

 Score =  159 bits (403), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 77/111 (69%), Positives = 95/111 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ +L YI+GIG   +++IC  L I  ++RV+QL E E+++IR+ I
Sbjct: 1   MARIAGVNIPSNKRVLISLRYIYGIGPAKAREICQSLEIGEDKRVNQLSEDEIMKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++DY+VEGDLRR VAMNIKRL+DLGCYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DRDYRVEGDLRREVAMNIKRLVDLGCYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|304321462|ref|YP_003855105.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503]
 gi|303300364|gb|ADM09963.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503]
          Length = 122

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++I +++ I  ERRV +L ++E+++IR+AI
Sbjct: 1   MARIAGVNIPNNKRVHIALTYIHGIGPSLAKEITDRVGIAEERRVQELSDAEILRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR  A+NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEGYTVEGDLRRETAVNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218508351|ref|ZP_03506229.1| 30S ribosomal protein S13 [Rhizobium etli Brasil 5]
          Length = 111

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 89/107 (83%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           V AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI++DYQVEGDLRR  A
Sbjct: 5   VIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAIDRDYQVEGDLRRETA 64

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K+
Sbjct: 65  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK 111


>gi|326387081|ref|ZP_08208691.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208262|gb|EGD59069.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 122

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   ++ I +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIVALTYIHGIGPFKARQIADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163739471|ref|ZP_02146881.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
 gi|163740264|ref|ZP_02147658.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10]
 gi|161386122|gb|EDQ10497.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10]
 gi|161387224|gb|EDQ11583.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
          Length = 122

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGTTSAEAICEAVGIDATRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302382641|ref|YP_003818464.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264]
 gi|302193269|gb|ADL00841.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264]
          Length = 133

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  AL YIHGIG  +++DI  K+ I   RRV+QL ++EV+QIR+ I
Sbjct: 12  VARIAGVNIPTNKRVEIALQYIHGIGPAAAKDIVGKVGIEASRRVNQLTDAEVLQIRETI 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 72  DKDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|146278546|ref|YP_001168705.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17025]
 gi|166231918|sp|A4WVI6|RS13_RHOS5 RecName: Full=30S ribosomal protein S13
 gi|145556787|gb|ABP71400.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17025]
          Length = 122

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YIHGIG   ++ IC+ + I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYIHGIGNHVAEQICDAVGIDRARRVNQLSDAEVLAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254474763|ref|ZP_05088149.1| ribosomal protein S13p/S18e [Ruegeria sp. R11]
 gi|214029006|gb|EEB69841.1| ribosomal protein S13p/S18e [Ruegeria sp. R11]
          Length = 122

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGSTSAEAICEAVGIDRTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|56695423|ref|YP_165771.1| 30S ribosomal protein S13 [Ruegeria pomeroyi DSS-3]
 gi|81350693|sp|Q5LW34|RS13_SILPO RecName: Full=30S ribosomal protein S13
 gi|56677160|gb|AAV93826.1| ribosomal protein S13 [Ruegeria pomeroyi DSS-3]
          Length = 122

 Score =  157 bits (398), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++E++ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEILAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYSVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329114196|ref|ZP_08242958.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001]
 gi|326696272|gb|EGE47951.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001]
          Length = 125

 Score =  157 bits (398), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 90/111 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV  L YI+GIG   + +IC  L IP  +RV++L + E++++R+ I
Sbjct: 1   MARIAGVNVPTNKRVVIGLQYIYGIGATKAAEICKALEIPEAKRVNELSDDEILKVRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK
Sbjct: 61  DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111


>gi|296534009|ref|ZP_06896525.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957]
 gi|296265675|gb|EFH11784.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957]
          Length = 177

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 95/111 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ +L YI+GIG  +++ IC +L IP +RRV+QL + E+++IR+ I
Sbjct: 53  MARIAGVNIPTNKRVLISLRYIYGIGPANAKVICEQLGIPEDRRVNQLTDEEILKIRELI 112

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR  AMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 113 DREYRVEGDLRRENAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRK 163


>gi|310816988|ref|YP_003964952.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25]
 gi|308755723|gb|ADO43652.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25]
          Length = 122

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGPTSAEAICAAVGIEPTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V+MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVSMNIKRLMDLGAYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126737030|ref|ZP_01752765.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6]
 gi|126721615|gb|EBA18318.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6]
          Length = 122

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPTSAKAICEAVNIDETRRVNELSDAEVLSIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83941473|ref|ZP_00953935.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36]
 gi|83847293|gb|EAP85168.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36]
          Length = 122

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260432470|ref|ZP_05786441.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416298|gb|EEX09557.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 122

 Score =  157 bits (397), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKKICEAVGIDESRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163733785|ref|ZP_02141227.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149]
 gi|161392896|gb|EDQ17223.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149]
          Length = 145

 Score =  157 bits (397), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP AKRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ +R+ I
Sbjct: 24  VARIAGVNIPTAKRVPIALTYITGIGNNSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 83

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 84  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 143

Query: 121 KR 122
           K+
Sbjct: 144 KK 145


>gi|163745566|ref|ZP_02152926.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45]
 gi|161382384|gb|EDQ06793.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45]
          Length = 122

 Score =  157 bits (397), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGTSSAKAICEAVGIDATRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|84499818|ref|ZP_00998106.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597]
 gi|84392962|gb|EAQ05173.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597]
          Length = 122

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+Q IC    I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPSSAQSICEATGIDQTRRVNELSDAEVLTIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|162139378|ref|YP_914590.2| 30S ribosomal protein S13 [Paracoccus denitrificans PD1222]
 gi|158706363|sp|A1B050|RS13_PARDP RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR   MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126724890|ref|ZP_01740733.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150]
 gi|126706054|gb|EBA05144.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150]
          Length = 122

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGTTSAAAICEAVGIESTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYNVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|258542049|ref|YP_003187482.1| 30S ribosomal protein S13 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633127|dbj|BAH99102.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636184|dbj|BAI02153.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639239|dbj|BAI05201.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642293|dbj|BAI08248.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645348|dbj|BAI11296.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648403|dbj|BAI14344.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651456|dbj|BAI17390.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654447|dbj|BAI20374.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-12]
          Length = 125

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 90/111 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV  L YI+GIG   + +IC  L IP  +RV++L + E++++R+ I
Sbjct: 1   MARIAGVNVPTNKRVVIGLQYIYGIGATKAVEICKALEIPEAKRVNELSDDEILKLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK
Sbjct: 61  DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRK 111


>gi|126728201|ref|ZP_01744017.1| 30S ribosomal protein S13 [Sagittula stellata E-37]
 gi|126711166|gb|EBA10216.1| 30S ribosomal protein S13 [Sagittula stellata E-37]
          Length = 122

 Score =  156 bits (395), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGHTSARAICEAVGIDATRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83593998|ref|YP_427750.1| 30S ribosomal protein S13 [Rhodospirillum rubrum ATCC 11170]
 gi|91207722|sp|Q2RQY2|RS13_RHORT RecName: Full=30S ribosomal protein S13
 gi|83576912|gb|ABC23463.1| SSU ribosomal protein S13P [Rhodospirillum rubrum ATCC 11170]
          Length = 122

 Score =  156 bits (395), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   + +IC +  I   RRV+ L + EV++IR+ I
Sbjct: 1   MARIAGVNIPSNKRVCIALTYIYGIGRTKAGEICERTGIAENRRVNDLSDDEVVRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VAMNIKR+MDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSEYKVEGDLRREVAMNIKRIMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254486500|ref|ZP_05099705.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101]
 gi|214043369|gb|EEB84007.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101]
          Length = 122

 Score =  156 bits (395), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNSSAAQICEAVGIDTTRRINELSDAEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENFSVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|99080118|ref|YP_612272.1| 30S ribosomal protein S13 [Ruegeria sp. TM1040]
 gi|123379121|sp|Q1GK06|RS13_SILST RecName: Full=30S ribosomal protein S13
 gi|99036398|gb|ABF63010.1| SSU ribosomal protein S13P [Ruegeria sp. TM1040]
          Length = 122

 Score =  156 bits (394), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260426999|ref|ZP_05780978.1| 30S ribosomal protein S13 [Citreicella sp. SE45]
 gi|260421491|gb|EEX14742.1| 30S ribosomal protein S13 [Citreicella sp. SE45]
          Length = 122

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+Q IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHTSAQAICEAVNIEASRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254511521|ref|ZP_05123588.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11]
 gi|221535232|gb|EEE38220.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11]
          Length = 122

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIEAHRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86135791|ref|ZP_01054370.1| ribosomal protein S13 [Roseobacter sp. MED193]
 gi|85826665|gb|EAQ46861.1| ribosomal protein S13 [Roseobacter sp. MED193]
          Length = 122

 Score =  155 bits (393), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPAAKRVPIALTYITGIGNTSAATICEAVGIDVTRRVNELSDAEVLSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|77462281|ref|YP_351785.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides 2.4.1]
 gi|126461157|ref|YP_001042271.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17029]
 gi|221638135|ref|YP_002524397.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131]
 gi|91207723|sp|Q3J5Q0|RS13_RHOS4 RecName: Full=30S ribosomal protein S13
 gi|158706272|sp|A3PGN3|RS13_RHOS1 RecName: Full=30S ribosomal protein S13
 gi|254811163|sp|B9KLB3|RS13_RHOSK RecName: Full=30S ribosomal protein S13
 gi|77386699|gb|ABA77884.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides 2.4.1]
 gi|126102821|gb|ABN75499.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17029]
 gi|221158916|gb|ACL99895.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131]
          Length = 122

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YIHGIG   +  IC+ + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYIHGIGDFVAGQICDAVGIDRARRVNELSDAEVLSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294085980|ref|YP_003552740.1| 30S ribosomal protein S13 [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665555|gb|ADE40656.1| ribosomal protein S13 [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 122

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  ++++IC +  +P ERRV+ L E E+ ++R  I
Sbjct: 1   MARIAGVNIPTKKRVEIALTYIHGIGTTTAKNICERAGVPDERRVNDLSEEELTKLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  +MNIKR +DLGC RGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADVLVEGDLRRQTSMNIKRYLDLGCLRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83854950|ref|ZP_00948480.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1]
 gi|83842793|gb|EAP81960.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1]
          Length = 133

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I
Sbjct: 12  VARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 72  DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|114704506|ref|ZP_01437414.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506]
 gi|114539291|gb|EAU42411.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506]
          Length = 122

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR V AL YIHGIG   ++ I  K  +  +RRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRAVIALQYIHGIGPSLAKQIMAKANLTEDRRVNDLSDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++QVEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DREHQVEGDLRRETSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89053106|ref|YP_508557.1| 30S ribosomal protein S13 [Jannaschia sp. CCS1]
 gi|122499557|sp|Q28UT0|RS13_JANSC RecName: Full=30S ribosomal protein S13
 gi|88862655|gb|ABD53532.1| SSU ribosomal protein S13P [Jannaschia sp. CCS1]
          Length = 122

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL Y+ GIG  S+  IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYVTGIGHTSAAAICEAVGIDVTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYAVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|119373301|gb|ABL68894.1| SSU ribosomal protein S13P [Paracoccus denitrificans PD1222]
          Length = 128

 Score =  155 bits (391), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP  KRV  AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I
Sbjct: 7   VARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR   MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 67  DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 126

Query: 121 KR 122
           K+
Sbjct: 127 KK 128


>gi|149202866|ref|ZP_01879837.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035]
 gi|149143412|gb|EDM31448.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035]
          Length = 122

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  L+I   RRV++L ++E + +R+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHASAKSICEALSIDVSRRVNELSDAEALALREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114767224|ref|ZP_01446089.1| 30S ribosomal protein S13 [Pelagibaca bermudensis HTCC2601]
 gi|114540634|gb|EAU43705.1| 30S ribosomal protein S13 [Roseovarius sp. HTCC2601]
          Length = 122

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+Q IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHTSAQQICEAVNIDATRRVNELSDTEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114771245|ref|ZP_01448665.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255]
 gi|114548170|gb|EAU51057.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255]
          Length = 122

 Score =  154 bits (389), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV  AL YI GIG  S+  ICN   I   RR+++L ++E++ IR+ I
Sbjct: 1   MARIAGVNLPTHKRVPIALTYITGIGPASADKICNGTKIDAARRINELSDAEILSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  DANFEVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|259416113|ref|ZP_05740033.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B]
 gi|259347552|gb|EEW59329.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B]
          Length = 122

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDVTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DATFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149915867|ref|ZP_01904391.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b]
 gi|149810190|gb|EDM70036.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b]
          Length = 122

 Score =  154 bits (388), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP +KRV  AL YI GIG  S++ IC  + I   RRV++L ++E++ +R+ +
Sbjct: 1   MARIAGVNIPTSKRVPIALTYITGIGHASAKAICEAVGIDQSRRVNELSDAELLAVREHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254452139|ref|ZP_05065576.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238]
 gi|198266545|gb|EDY90815.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238]
          Length = 122

 Score =  154 bits (388), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+Q IC  ++I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAQAICEAVSIDVARRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +YQVEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 61  DANYQVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|85374441|ref|YP_458503.1| 30S ribosomal protein S13 [Erythrobacter litoralis HTCC2594]
 gi|122544188|sp|Q2N9D5|RS13_ERYLH RecName: Full=30S ribosomal protein S13
 gi|84787524|gb|ABC63706.1| ribosomal protein S13 [Erythrobacter litoralis HTCC2594]
          Length = 122

 Score =  153 bits (386), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL I   RRV  L + EV+++R+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTTAVKIADKLGIDHARRVQDLTDEEVLRLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D  VEGDLRR  AMNIKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEDLMVEGDLRRETAMNIKRLMDLKSYRGLRHRNGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|85706697|ref|ZP_01037789.1| 30S ribosomal protein S13 [Roseovarius sp. 217]
 gi|85668755|gb|EAQ23624.1| 30S ribosomal protein S13 [Roseovarius sp. 217]
          Length = 122

 Score =  153 bits (386), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  L I   RRV++L ++E + +R+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHSSAKSICEALNIDTSRRVNELSDAEALALREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRRESQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159042863|ref|YP_001531657.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12]
 gi|157910623|gb|ABV92056.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12]
          Length = 147

 Score =  152 bits (384), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVN+P  KR   AL YI GIG  S+Q IC  + I   RR+++L ++E++ IR+ I
Sbjct: 26  LARIAGVNLPTGKRTPIALTYITGIGLSSAQAICEAVGIEESRRLNELSDAEILAIREHI 85

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 86  DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 145

Query: 121 KR 122
           K+
Sbjct: 146 KK 147


>gi|83949765|ref|ZP_00958498.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM]
 gi|83837664|gb|EAP76960.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM]
          Length = 122

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTHKRVPIALTYITGIGNTSAKAICEAVGIDLTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYMVEGDLRRETQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260577157|ref|ZP_05845134.1| ribosomal protein S13 [Rhodobacter sp. SW2]
 gi|259020631|gb|EEW23950.1| ribosomal protein S13 [Rhodobacter sp. SW2]
          Length = 122

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG   ++ IC  + I   RRV+ L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGPHIAEQICEAVGIDRARRVNDLTDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANLTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89070530|ref|ZP_01157819.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516]
 gi|89043837|gb|EAR50035.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516]
          Length = 122

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPSSAKAICEAVNIDQTRRVNELSDAEVLSIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR   MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRRETQMNIKRLMDLGSYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325294421|ref|YP_004280935.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325064869|gb|ADY72876.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 126

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K+V  +L YI+GIG K+   IC +  I PE+RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPDNKKVPYSLAYIYGIGIKTGFKICEEAGIDPEKRVKDLTEEEIAKIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLR+ +AMNIKRLM++GCYRG+RHR GLPVRGQRT TNARTRK
Sbjct: 61  ETEYKVEGDLRKEIAMNIKRLMEIGCYRGIRHRLGLPVRGQRTRTNARTRK 111


>gi|85709031|ref|ZP_01040097.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1]
 gi|85690565|gb|EAQ30568.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1]
          Length = 122

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL IP   RV  L + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTTAVQIADKLGIPHTARVQDLTDEEVLRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR  AMNIKRLMDL  YRGLRHR  LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEAYTVEGDLRRNTAMNIKRLMDLRSYRGLRHRNQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|262197165|ref|YP_003268374.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
 gi|262080512|gb|ACY16481.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
          Length = 127

 Score =  150 bits (380), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG + S ++ +K  I P++R   L E++V  IR  I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRRRSNELLDKAGITPDKRTDDLDENDVRMIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANYKVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRK 111


>gi|108761573|ref|YP_631522.1| 30S ribosomal protein S13 [Myxococcus xanthus DK 1622]
 gi|123374507|sp|Q1D751|RS13_MYXXD RecName: Full=30S ribosomal protein S13
 gi|108465453|gb|ABF90638.1| ribosomal protein S13 [Myxococcus xanthus DK 1622]
          Length = 127

 Score =  150 bits (380), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/116 (64%), Positives = 87/116 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  KR V +L YI+GIG KS+QDI     I P  R   L E +  +IR+ I
Sbjct: 1   MARIAGIDLPPNKRAVISLQYIYGIGNKSAQDIIAAAGIDPTTRTKDLTEEQARKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           E  Y+VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   +G
Sbjct: 61  EASYKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRG 116


>gi|258512645|ref|YP_003186079.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479371|gb|ACV59690.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 122

 Score =  150 bits (380), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P +RV  L E EV+++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRK 111


>gi|319789263|ref|YP_004150896.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
 gi|317113765|gb|ADU96255.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
          Length = 126

 Score =  150 bits (379), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K+V  +L YI+GIG KS   IC K  + PE+RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPDNKKVPYSLAYIYGIGIKSGFKICEKAGVDPEKRVKDLTEEEIAKIRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLR+ +AMNIKRL+++GCYRG+RHR GLPVRGQRT TNARTRK
Sbjct: 61  ENEYKVEGDLRKEIAMNIKRLIEIGCYRGVRHRLGLPVRGQRTRTNARTRK 111


>gi|159901448|ref|YP_001547695.1| 30S ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779]
 gi|226712747|sp|A9B434|RS13_HERA2 RecName: Full=30S ribosomal protein S13
 gi|159894487|gb|ABX07567.1| ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 127

 Score =  150 bits (379), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 92/119 (77%), Gaps = 2/119 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  +L YI+GIG  +S +I  +  I P  RV  L E EVI++R+ I
Sbjct: 1   MARISGVDIPRNKRVEISLTYIYGIGRTTSTEILARTNINPNVRVKDLTEDEVIRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +QDY VEGDLRR V +NIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTR+  GK G A
Sbjct: 61  DQDYTVEGDLRRAVQLNIKRLMDIGCYRGIRHRKGLPLRGQRTKTNARTRR--GKKGAA 117


>gi|297618358|ref|YP_003703517.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146195|gb|ADI02952.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
          Length = 123

 Score =  150 bits (379), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 90/111 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRVV AL YI GIG  S++ I  +  I P+ RV  L E E+ +IR+AI
Sbjct: 1   MARVAGVDLPRDKRVVVALTYIFGIGRSSAEKIVKETGINPDTRVKDLTEEEIAKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEG+LRR ++MNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DRGYKVEGELRREISMNIKRLIDIGCYRGIRHRRGLPVRGQRTRTNARTRK 111


>gi|167036826|ref|YP_001664404.1| 30S ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039545|ref|YP_001662530.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X514]
 gi|256752657|ref|ZP_05493509.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289579117|ref|YP_003477744.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
 gi|297545304|ref|YP_003677606.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|300915204|ref|ZP_07132519.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
 gi|307266989|ref|ZP_07548505.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|307725128|ref|YP_003904879.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
 gi|320115248|ref|YP_004185407.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|326390636|ref|ZP_08212191.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
 gi|226712796|sp|B0KCM5|RS13_THEP3 RecName: Full=30S ribosomal protein S13
 gi|226712797|sp|B0K5R8|RS13_THEPX RecName: Full=30S ribosomal protein S13
 gi|166853785|gb|ABY92194.1| ribosomal protein S13 [Thermoanaerobacter sp. X514]
 gi|166855660|gb|ABY94068.1| ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748477|gb|EEU61529.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289528830|gb|ADD03182.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
 gi|296843079|gb|ADH61595.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|300888928|gb|EFK84075.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
 gi|306917974|gb|EFN48232.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|307582189|gb|ADN55588.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
 gi|319928339|gb|ADV79024.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|325993314|gb|EGD51751.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
          Length = 122

 Score =  150 bits (379), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 89/111 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S +I  K  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEEEVSRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLR+ VAMNIKRLMD+GCYRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRKEVAMNIKRLMDIGCYRGIRHKRGLPVRGQRTRTNARTRK 111


>gi|77918339|ref|YP_356154.1| 30S ribosomal protein S13 [Pelobacter carbinolicus DSM 2380]
 gi|91207711|sp|Q3A6M3|RS13_PELCD RecName: Full=30S ribosomal protein S13
 gi|77544422|gb|ABA87984.1| SSU ribosomal protein S13P [Pelobacter carbinolicus DSM 2380]
          Length = 122

 Score =  150 bits (378), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  SSQDI  K  + P  R  +L E+E  QIR  I
Sbjct: 1   MARIAGIDLPRNKRIEVALTYIYGIGRSSSQDILQKAGVDPNTRTDELTEAEAGQIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   QVEGDLRR V  NIKRLMDLGCYRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DGQMQVEGDLRRVVTGNIKRLMDLGCYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|218289981|ref|ZP_03494158.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239966|gb|EED07153.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
          Length = 122

 Score =  150 bits (378), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P +RV  L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRK 111


>gi|325288602|ref|YP_004264783.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271]
 gi|324964003|gb|ADY54782.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271]
          Length = 122

 Score =  149 bits (377), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 94/122 (77%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  AL YI+GIG   S+ I  K  + P+ RV  L + EV +IR+ I
Sbjct: 1   MARISGVDIPRDKRVEIALTYIYGIGNSQSKKILEKTQVSPDTRVRDLTDDEVARIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK   +  +AR
Sbjct: 61  DKEYMVEGDLRREVSLNIKRLMEIGCYRGMRHRRGLPVRGQRTKTNARTRKGPAR-AIAR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|237751465|ref|ZP_04581945.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879]
 gi|229372831|gb|EEO23222.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879]
          Length = 120

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS+DI N ++I  ++RVH L E ++ +I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILNAVSISFDKRVHDLSEDDISKISKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|294675881|ref|YP_003576496.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003]
 gi|294474701|gb|ADE84089.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003]
          Length = 122

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   ++ I   + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALQYIHGIGPMFAKQIVEAVGIAEARRVNELTDAEVLAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAHFTVEGDLRREVSMNIKRLMDLGCYRGLRHRKNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269792768|ref|YP_003317672.1| 30S ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100403|gb|ACZ19390.1| ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 125

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +S+ I     + P RR   L + E  +IR  I
Sbjct: 1   MARIAGVDLPREKRIEIALTYIYGIGLTTSRKILASTGVDPNRRTKDLTDEEAQRIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  ENNYKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111


>gi|254461772|ref|ZP_05075188.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium HTCC2083]
 gi|206678361|gb|EDZ42848.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium HTCC2083]
          Length = 122

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTHKRVPIALTYITGIGPASAKAICEAVKIDETRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 61  DATYNVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126736628|ref|ZP_01752368.1| ribosomal protein S13 [Roseobacter sp. CCS2]
 gi|126713941|gb|EBA10812.1| ribosomal protein S13 [Roseobacter sp. CCS2]
          Length = 133

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP AKRV  AL YI GIG   +++IC  + I   RRV+QL ++EV+ IR+ I
Sbjct: 12  VARIAGVNIPTAKRVPIALTYITGIGNAKAEEICEAVKIDRARRVNQLSDAEVLSIREYI 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 72  DANLMVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|220903957|ref|YP_002479269.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254811146|sp|B8IYL4|RS13_DESDA RecName: Full=30S ribosomal protein S13
 gi|219868256|gb|ACL48591.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 122

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTAMKILDTTGVNWERSIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ Y+VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQHYKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|20808635|ref|NP_623806.1| 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
 gi|32363349|sp|Q8R7X9|RS13_THETN RecName: Full=30S ribosomal protein S13
 gi|20517269|gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
          Length = 122

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 89/111 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRSRSKEILAKAGVNPDTRVRDLTEDEVSKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLR+ VAMNIKRL+D+GCYRG+RH+ GLPVRGQRT TNARTRK
Sbjct: 61  EKEYKVEGDLRKEVAMNIKRLIDIGCYRGIRHKLGLPVRGQRTRTNARTRK 111


>gi|147676680|ref|YP_001210895.1| 30S ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
 gi|189044284|sp|A5D5E5|RS13_PELTS RecName: Full=30S ribosomal protein S13
 gi|146272777|dbj|BAF58526.1| ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
          Length = 123

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 89/111 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +SQ I  +  + P+ RV  L E E+ ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGKPTSQKILAQSGVNPDTRVRNLTEEEINKLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKNYKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|149184336|ref|ZP_01862654.1| ribosomal protein S13 [Erythrobacter sp. SD-21]
 gi|148831656|gb|EDL50089.1| ribosomal protein S13 [Erythrobacter sp. SD-21]
          Length = 122

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   + +I +KL I    RV  L + E++++R+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTKAVEIADKLGIDHATRVQDLTDEELLRVRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR  AMNIKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEEHTVEGDLRRETAMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|303328071|ref|ZP_07358510.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3]
 gi|302861897|gb|EFL84832.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3]
          Length = 122

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTALKILDSTGVNWERSIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQNFKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153004797|ref|YP_001379122.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5]
 gi|166231897|sp|A7HBP2|RS13_ANADF RecName: Full=30S ribosomal protein S13
 gi|152028370|gb|ABS26138.1| ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5]
          Length = 127

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 91/118 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  ++Q IC++  +    R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVALQYIYGIGKTTAQAICHRANVDVTTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           EQ  +VEGDLRR +++NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V
Sbjct: 61  EQAVKVEGDLRREISLNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118


>gi|296131861|ref|YP_003639108.1| 30S ribosomal protein S13 [Thermincola sp. JR]
 gi|296030439|gb|ADG81207.1| 30S ribosomal protein S13 [Thermincola potens JR]
          Length = 123

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  ++  I ++  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGRPTANQILSQTGVNPDTRVRDLTEEEVAKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNYKVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPAKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|51894185|ref|YP_076876.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863]
 gi|81387945|sp|Q67JW8|RS13_SYMTH RecName: Full=30S ribosomal protein S13
 gi|51857874|dbj|BAD42032.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863]
          Length = 124

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 89/111 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG+  S++I  K  I P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEAALPYIYGIGWSLSREILKKTGIDPDTRVRDLTEEQVAKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL+R V MNIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DHEYKVEGDLQREVQMNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|225175649|ref|ZP_03729643.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
 gi|225168978|gb|EEG77778.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
          Length = 123

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 90/111 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG K+SQDI ++ A+  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGRKTSQDILSQSAVNMDTRVRDLTEDEVNRLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR VAMNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DKNYKVEGDLRREVAMNIKRLMEIGSYRGIRHRRGLPVRGQTTKNNARTRK 111


>gi|114567815|ref|YP_754969.1| 30S ribosomal protein S13 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317307|sp|Q0AUK6|RS13_SYNWW RecName: Full=30S ribosomal protein S13
 gi|114338750|gb|ABI69598.1| SSU ribosomal protein S13P [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 122

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI GIG  SS+ I     I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEVSLTYIFGIGRSSSRKILTDAGINPDTRVKDLTEEEVSKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y VEGDLRR V M+IKRLMDLGCYRG+RHRRGLPVRGQ T TNARTRK
Sbjct: 61  EKEYHVEGDLRRQVNMDIKRLMDLGCYRGIRHRRGLPVRGQNTKTNARTRK 111


>gi|322381103|ref|ZP_08055106.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154679|gb|EFX46950.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 122

 Score =  146 bits (369), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+ AL YI GIG  ++Q I N+  + P+ RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDLPRDKRVIIALTYIFGIGKTTAQKIINETGVNPDTRVRDLTEDEISKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKQLKVEGDLRREIALNIKRLVEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111


>gi|32266899|ref|NP_860931.1| 30S ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
 gi|81665564|sp|Q7VGC2|RS13_HELHP RecName: Full=30S ribosomal protein S13
 gi|32262951|gb|AAP77997.1| ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
          Length = 120

 Score =  146 bits (369), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSSQDI   + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSQDILKAVNISFDKRVSDLSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QESYMVEGDLRKKVTMDIKSLMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|220917145|ref|YP_002492449.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254811122|sp|B8J884|RS13_ANAD2 RecName: Full=30S ribosomal protein S13
 gi|219954999|gb|ACL65383.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 128

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 91/118 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  S++ I  +  + P  R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V
Sbjct: 61  EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118


>gi|15807119|ref|NP_295848.1| 30S ribosomal protein S13 [Deinococcus radiodurans R1]
 gi|32363426|sp|Q9RSJ9|RS13_DEIRA RecName: Full=30S ribosomal protein S13
 gi|6459923|gb|AAF11675.1|AE002047_8 ribosomal protein S13 [Deinococcus radiodurans R1]
          Length = 126

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG   S++I  +  + P+ RV  L E+E   +R+AI
Sbjct: 1   MARIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKTYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|46579737|ref|YP_010545.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602786|ref|YP_967186.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris DP4]
 gi|81566848|sp|Q72CF7|RS13_DESVH RecName: Full=30S ribosomal protein S13
 gi|158706227|sp|A1VE93|RS13_DESVV RecName: Full=30S ribosomal protein S13
 gi|46449152|gb|AAS95804.1| ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563015|gb|ABM28759.1| SSU ribosomal protein S13P [Desulfovibrio vulgaris DP4]
 gi|311233528|gb|ADP86382.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris RCH1]
          Length = 122

 Score =  146 bits (368), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/122 (60%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +   R V  L   EV +IR+ I
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRATALQILDATGVNWTRNVDDLNADEVNEIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPVRGQRTHTNARTRK   +G V +
Sbjct: 61  EQNHKVEGDLRREISANIKRLMDIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRGTVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254440445|ref|ZP_05053939.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307]
 gi|198255891|gb|EDY80205.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307]
          Length = 139

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 18  VARIAGVNIPTAKRVPIALTYITGIGNTSAAAICEAVKIDVTRRVNELSDAEVLAIREHI 77

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 78  DANYMVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 137

Query: 121 KR 122
           K+
Sbjct: 138 KK 139


>gi|86158345|ref|YP_465130.1| 30S ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|197122363|ref|YP_002134314.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. K]
 gi|123497979|sp|Q2IJ63|RS13_ANADE RecName: Full=30S ribosomal protein S13
 gi|226712688|sp|B4UBC3|RS13_ANASK RecName: Full=30S ribosomal protein S13
 gi|85774856|gb|ABC81693.1| SSU ribosomal protein S13P [Anaeromyxobacter dehalogenans 2CP-C]
 gi|196172212|gb|ACG73185.1| ribosomal protein S13 [Anaeromyxobacter sp. K]
          Length = 128

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 91/118 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  S++ I  +  + P  R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V
Sbjct: 61  EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118


>gi|302344332|ref|YP_003808861.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075]
 gi|301640945|gb|ADK86267.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075]
          Length = 123

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  +S+ I +   + P+ +   L   EV +IRQ I
Sbjct: 1   MARIAGIDLPRNKRIEVALTYIYGIGPSTSKRILDAAGVNPDTKSDALNSEEVNRIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   +  V +
Sbjct: 61  DEAYKVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSRAVVGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|152989995|ref|YP_001355717.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2]
 gi|158706256|sp|A6Q1K1|RS13_NITSB RecName: Full=30S ribosomal protein S13
 gi|151421856|dbj|BAF69360.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2]
          Length = 120

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL Y++GIG  +S+ I + + I  ++RV++L E EV  I + I
Sbjct: 1   MARIAGVDLPKNKRIEYALPYVYGIGLTTSRKILDAVGISYDKRVYELTEDEVAAINKHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y VEGDLRR VAM+IK LMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  RENYMVEGDLRRKVAMDIKALMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|312880346|ref|ZP_07740146.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260]
 gi|310783637|gb|EFQ24035.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260]
          Length = 125

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  SS+ I     + P+ R   L + E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLTSSKKILAATGVNPDTRTKDLTDEEAQRIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  ENQFKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111


>gi|162456222|ref|YP_001618589.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56']
 gi|189044298|sp|A9FGC9|RS13_SORC5 RecName: Full=30S ribosomal protein S13
 gi|161166804|emb|CAN98109.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56']
          Length = 126

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K V  AL Y+ GIG   +  IC K  IP  +RV +L ++EV  IR  +
Sbjct: 1   MARIAGVDLPRRKHVAYALPYLFGIGRTLALQICEKTNIPQNKRVEELSDAEVKAIRDLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP  GQRTHTNARTRK   KG + R
Sbjct: 61  DAEYKVEGDLRREVQLNIKRLMDLGCYRGLRHRRGLPANGQRTHTNARTRKGPRKGMLQR 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|258513665|ref|YP_003189887.1| 30S ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777370|gb|ACV61264.1| ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771]
          Length = 123

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 89/111 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG K+SQ I  K  + P+ R+  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGKKTSQKIIEKTGVNPDTRIRNLTEDEINKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++ ++EGDLRR +A+NIKRL+++GCYRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  EKNCKIEGDLRREIALNIKRLIEIGCYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|57242512|ref|ZP_00370450.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195]
 gi|315639082|ref|ZP_07894250.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21]
 gi|57016797|gb|EAL53580.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195]
 gi|315480858|gb|EFU71494.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21]
          Length = 121

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|57238605|ref|YP_179736.1| 30S ribosomal protein S13 [Campylobacter jejuni RM1221]
 gi|86152230|ref|ZP_01070441.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596382|ref|ZP_01099619.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925736|ref|ZP_01809424.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|153951257|ref|YP_001398872.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157415812|ref|YP_001483068.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205355606|ref|ZP_03222376.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563181|ref|YP_002344961.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|283956976|ref|ZP_06374448.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336]
 gi|315125000|ref|YP_004067004.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|32363423|sp|Q9PM83|RS13_CAMJE RecName: Full=30S ribosomal protein S13
 gi|81353183|sp|Q5HSJ9|RS13_CAMJR RecName: Full=30S ribosomal protein S13
 gi|166231908|sp|A7H5U2|RS13_CAMJD RecName: Full=30S ribosomal protein S13
 gi|172047191|sp|A8FNQ4|RS13_CAMJ8 RecName: Full=30S ribosomal protein S13
 gi|57167409|gb|AAW36188.1| ribosomal protein S13/S18 [Campylobacter jejuni RM1221]
 gi|85840719|gb|EAQ57970.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191223|gb|EAQ95195.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360888|emb|CAL35689.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|145845746|gb|EDK22837.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|152938703|gb|ABS43444.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157386776|gb|ABV53091.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205346383|gb|EDZ33016.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283791477|gb|EFC30274.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336]
 gi|284926787|gb|ADC29139.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307748449|gb|ADN91719.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni M1]
 gi|315018722|gb|ADT66815.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315059043|gb|ADT73372.1| SSU ribosomal protein S13p/S18 [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315927662|gb|EFV06993.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929463|gb|EFV08660.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 305]
 gi|315931271|gb|EFV10241.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 327]
          Length = 121

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|89893242|ref|YP_516729.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51]
 gi|219666515|ref|YP_002456950.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense DCB-2]
 gi|122483916|sp|Q250K7|RS13_DESHY RecName: Full=30S ribosomal protein S13
 gi|254811147|sp|B8G1Z1|RS13_DESHD RecName: Full=30S ribosomal protein S13
 gi|89332690|dbj|BAE82285.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51]
 gi|219536775|gb|ACL18514.1| ribosomal protein S13 [Desulfitobacterium hafniense DCB-2]
          Length = 123

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  ++Q I  +  + PE R+  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIYGIGLPTAQKILARTGVNPETRIRDLSEEEVNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKEIKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|269837091|ref|YP_003319319.1| 30S ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745]
 gi|269786354|gb|ACZ38497.1| ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745]
          Length = 124

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +S+ +  +  + P+ RV  L + EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGLSTSKKLLERTGVSPDTRVRDLTDDEVGRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++  VEGDLRR + MNIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKEMVVEGDLRREINMNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|283953796|ref|ZP_06371327.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794837|gb|EFC33575.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414]
          Length = 121

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFASRKILDKVGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|222823136|ref|YP_002574709.1| 30S ribosomal protein S13 [Campylobacter lari RM2100]
 gi|254811136|sp|B9KEH3|RS13_CAMLR RecName: Full=30S ribosomal protein S13
 gi|222538357|gb|ACM63458.1| 30S ribosomal protein S13 [Campylobacter lari RM2100]
          Length = 121

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLHTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|117924177|ref|YP_864794.1| 30S ribosomal protein S13 [Magnetococcus sp. MC-1]
 gi|158706244|sp|A0L5Z5|RS13_MAGSM RecName: Full=30S ribosomal protein S13
 gi|117607933|gb|ABK43388.1| SSU ribosomal protein S13P [Magnetococcus sp. MC-1]
          Length = 122

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GI   S++ I  +  I P+ RV  L ++EV Q+R  I
Sbjct: 1   MARIAGVNIPVNKRVEIALTYIYGICRDSAKRITKEAGIEPQVRVSDLTDAEVAQLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + ++ VEGDLRR +AMN+KRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK
Sbjct: 61  DNNHTVEGDLRRQIAMNVKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRK 111


>gi|57504896|ref|ZP_00370871.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228]
 gi|305432397|ref|ZP_07401559.1| 30S ribosomal protein S13 [Campylobacter coli JV20]
 gi|57019324|gb|EAL56026.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228]
 gi|304444436|gb|EFM37087.1| 30S ribosomal protein S13 [Campylobacter coli JV20]
          Length = 121

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 [Campylobacter fetus subsp. fetus 82-40]
 gi|158706219|sp|A0RM33|RS13_CAMFF RecName: Full=30S ribosomal protein S13
 gi|118414680|gb|ABK83100.1| ribosomal protein S13p/S18e [Campylobacter fetus subsp. fetus
           82-40]
          Length = 122

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I N + I  ++RV++L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILNAVGISYDKRVYELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QEHYMVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|308272956|emb|CBX29560.1| 30S ribosomal protein S13 [uncultured Desulfobacterium sp.]
          Length = 127

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KRV   L YI+GIG   S+ I +KL I P+ +V QL E+E+  IRQ I
Sbjct: 1   MARISGVDLPKHKRVEIGLTYIYGIGRSMSKSILSKLNINPDTKVDQLSETEINSIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEG+LR  ++MNIKRLMDLGCYRGLRHR+ LPVRGQRT TN+RTRK
Sbjct: 61  NTEYKVEGELRTDISMNIKRLMDLGCYRGLRHRKSLPVRGQRTKTNSRTRK 111


>gi|78221870|ref|YP_383617.1| 30S ribosomal protein S13 [Geobacter metallireducens GS-15]
 gi|91207703|sp|Q39XY2|RS13_GEOMG RecName: Full=30S ribosomal protein S13
 gi|78193125|gb|ABB30892.1| SSU ribosomal protein S13P [Geobacter metallireducens GS-15]
          Length = 122

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  ++Q I  +  +  + R   L E+EV +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRTTAQKILAESGVSVDTRTDSLTEAEVAKIREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  DKNIKVEGDLRRDVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|313903126|ref|ZP_07836520.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965]
 gi|317123072|ref|YP_004103075.1| 30S ribosomal protein S13P [Thermaerobacter marianensis DSM 12885]
 gi|313466628|gb|EFR62148.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965]
 gi|315593052|gb|ADU52348.1| SSU ribosomal protein S13P [Thermaerobacter marianensis DSM 12885]
          Length = 126

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  + P+ RV  L E E+ ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEYALPYIYGIGLSRSREILAKAQVNPDTRVRDLTEDEINRLRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+DY+VEG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ERDYKVEGELRSEVQRNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|57239315|ref|YP_180451.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58579281|ref|YP_197493.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58617335|ref|YP_196534.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel]
 gi|75356679|sp|Q5FFR9|RS13_EHRRG RecName: Full=30S ribosomal protein S13
 gi|81352862|sp|Q5HAU3|RS13_EHRRW RecName: Full=30S ribosomal protein S13
 gi|57161394|emb|CAH58318.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416947|emb|CAI28060.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel]
 gi|58417907|emb|CAI27111.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
          Length = 123

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIYGIGISLANKICESCNIDHNIRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   +  VA 
Sbjct: 61  RENYVVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSRLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297623299|ref|YP_003704733.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093]
 gi|297164479|gb|ADI14190.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093]
          Length = 126

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ++  +  + P+ RV  L E+EV ++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEHALPYIYGIGLSRSQEVLAQAGVNPDTRVKDLAEAEVARLREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y+VEGDLRR + +NIKRLMD+G YRGLRHRRGLPVRGQ + TNARTRK
Sbjct: 61  EKTYKVEGDLRREIQLNIKRLMDIGSYRGLRHRRGLPVRGQSSKTNARTRK 111


>gi|86152866|ref|ZP_01071071.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613746|ref|YP_001001235.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006128|ref|ZP_02271886.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|158706220|sp|A1W1J4|RS13_CAMJJ RecName: Full=30S ribosomal protein S13
 gi|85843751|gb|EAQ60961.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249756|gb|EAQ72715.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 121

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I   +RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYNKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|149922190|ref|ZP_01910628.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1]
 gi|149816930|gb|EDM76415.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1]
          Length = 123

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI+G+G  +SQ+I  K  +    R   L E ++  IR+ I
Sbjct: 1   MARISGVDLPRNKRVEIALTYIYGVGRTTSQEILVKAGVGGSIRTDDLNEEQLSAIRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY+VEGDLRR V   IKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  ESDYKVEGDLRREVQTKIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPKRGQVAM 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|73667207|ref|YP_303223.1| 30S ribosomal protein S13 [Ehrlichia canis str. Jake]
 gi|91207702|sp|Q3YRN0|RS13_EHRCJ RecName: Full=30S ribosomal protein S13
 gi|72394348|gb|AAZ68625.1| SSU ribosomal protein S13P [Ehrlichia canis str. Jake]
          Length = 123

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   K  VA 
Sbjct: 61  RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294101654|ref|YP_003553512.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261]
 gi|293616634|gb|ADE56788.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261]
          Length = 125

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +S  I     I P+ RV  L E E  +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLPTSHLILAATGINPDTRVKDLTEEEAQRIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V MNIKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK
Sbjct: 61  QEHYKVEGDLRREVTMNIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRK 111


>gi|222056682|ref|YP_002539044.1| ribosomal protein S13 [Geobacter sp. FRC-32]
 gi|254811149|sp|B9M6F5|RS13_GEOSF RecName: Full=30S ribosomal protein S13
 gi|221565971|gb|ACM21943.1| ribosomal protein S13 [Geobacter sp. FRC-32]
          Length = 122

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  +SQ I  +  +    R   L ESEV +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRSTSQKILAEAGVDANTRSDNLTESEVAKIRENI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK
Sbjct: 61  DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRK 111


>gi|88658171|ref|YP_507248.1| 30S ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas]
 gi|123493519|sp|Q2GH35|RS13_EHRCR RecName: Full=30S ribosomal protein S13
 gi|88599628|gb|ABD45097.1| ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas]
          Length = 123

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/122 (61%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+V AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   K  VA 
Sbjct: 61  RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|94985943|ref|YP_605307.1| 30S ribosomal protein S13 [Deinococcus geothermalis DSM 11300]
 gi|158706226|sp|Q1IX96|RS13_DEIGD RecName: Full=30S ribosomal protein S13
 gi|94556224|gb|ABF46138.1| ribosomal protein S13 [Deinococcus geothermalis DSM 11300]
          Length = 126

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   ++++  +  + P+ RV  L E+E   +R+AI
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLTRAKEVLARTGVNPDTRVKNLSETEQSALREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|251799616|ref|YP_003014347.1| ribosomal protein S13 [Paenibacillus sp. JDR-2]
 gi|247547242|gb|ACT04261.1| ribosomal protein S13 [Paenibacillus sp. JDR-2]
          Length = 122

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI GIG  +SQ I     + P+ RV  L E E+ ++R+AI
Sbjct: 1   MARIAGVDIPRDKRVEIALTYIFGIGKTTSQKILASTGVNPDTRVRDLTEDELAKLREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111


>gi|86149387|ref|ZP_01067618.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85840169|gb|EAQ57427.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 121

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++R H+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRFHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|224373706|ref|YP_002608078.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH]
 gi|254811159|sp|B9L6U0|RS13_NAUPA RecName: Full=30S ribosomal protein S13
 gi|223589832|gb|ACM93568.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH]
          Length = 122

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K++  AL YI+GIG  +S+ I     I PE+RV++L E EV  + + I
Sbjct: 1   MARIAGIDLPKKKKIEYALPYIYGIGLTTSRKILKDTGIDPEKRVYELTEDEVSILNKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  QSNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|118579142|ref|YP_900392.1| 30S ribosomal protein S13 [Pelobacter propionicus DSM 2379]
 gi|158706257|sp|A1ALW4|RS13_PELPD RecName: Full=30S ribosomal protein S13
 gi|118501852|gb|ABK98334.1| SSU ribosomal protein S13P [Pelobacter propionicus DSM 2379]
          Length = 122

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+V AL YI+GIG  +++ I     + P  R   L E++V  +R  I
Sbjct: 1   MARIAGIDLPKNKRIVIALTYIYGIGNSTAEKILEATNVDPNTRTDNLTEADVSHLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  DRNIKVEGDLRREISMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|78043008|ref|YP_361093.1| 30S ribosomal protein S13 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|91207693|sp|Q3A9U1|RS13_CARHZ RecName: Full=30S ribosomal protein S13
 gi|77995123|gb|ABB14022.1| ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 123

 Score =  144 bits (363), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I  K  I P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEG+LRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EKNYKVEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNARTRK 111


>gi|15645909|ref|NP_208088.1| 30S ribosomal protein S13 [Helicobacter pylori 26695]
 gi|108563666|ref|YP_627982.1| 30S ribosomal protein S13 [Helicobacter pylori HPAG1]
 gi|188528084|ref|YP_001910771.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
 gi|207108654|ref|ZP_03242816.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_CA4C1]
 gi|208435194|ref|YP_002266860.1| ribosomal protein S13 [Helicobacter pylori G27]
 gi|210135455|ref|YP_002301894.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
 gi|217032050|ref|ZP_03437550.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
 gi|217033615|ref|ZP_03439043.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
 gi|298735679|ref|YP_003728204.1| 30S ribosomal protein S13 [Helicobacter pylori B8]
 gi|308183406|ref|YP_003927533.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
 gi|308185048|ref|YP_003929181.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
 gi|2500456|sp|P56020|RS13_HELPY RecName: Full=30S ribosomal protein S13
 gi|123373689|sp|Q1CRW4|RS13_HELPH RecName: Full=30S ribosomal protein S13
 gi|226712744|sp|B6JND6|RS13_HELP2 RecName: Full=30S ribosomal protein S13
 gi|226712745|sp|B5Z8U5|RS13_HELPG RecName: Full=30S ribosomal protein S13
 gi|226712746|sp|B2UV59|RS13_HELPS RecName: Full=30S ribosomal protein S13
 gi|2314462|gb|AAD08339.1| ribosomal protein S13 (rps13) [Helicobacter pylori 26695]
 gi|107837439|gb|ABF85308.1| ribosomal protein S13 [Helicobacter pylori HPAG1]
 gi|188144324|gb|ACD48741.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
 gi|208433123|gb|ACI27994.1| ribosomal protein S13 [Helicobacter pylori G27]
 gi|210133423|gb|ACJ08414.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
 gi|216943961|gb|EEC23395.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
 gi|216946198|gb|EEC24806.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
 gi|261838615|gb|ACX98381.1| ribosomal protein S13 [Helicobacter pylori 51]
 gi|261840011|gb|ACX99776.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52]
 gi|297380478|gb|ADI35365.1| 30S ribosomal protein S13 [Helicobacter pylori v225d]
 gi|298354868|emb|CBI65740.1| small subunit ribosomal protein S13 [Helicobacter pylori B8]
 gi|308060968|gb|ADO02864.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
 gi|308062581|gb|ADO04469.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20]
 gi|308064073|gb|ADO05960.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464]
 gi|308065591|gb|ADO07483.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
 gi|317009979|gb|ADU80559.1| 30S ribosomal protein S13 [Helicobacter pylori India7]
 gi|317011496|gb|ADU85243.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7]
 gi|317014687|gb|ADU82123.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24]
 gi|317178035|dbj|BAJ55824.1| 30S ribosomal protein S13 [Helicobacter pylori F16]
 gi|317181018|dbj|BAJ58804.1| 30S ribosomal protein S13 [Helicobacter pylori F32]
          Length = 120

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|218885210|ref|YP_002434531.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226712732|sp|B8DNK6|RS13_DESVM RecName: Full=30S ribosomal protein S13
 gi|218756164|gb|ACL07063.1| ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 122

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +   R +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTALQILDVTGVDWSRNIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQNHKVEGDLRREISSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|289548517|ref|YP_003473505.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484]
 gi|289182134|gb|ADC89378.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484]
          Length = 126

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL Y++GIG+  +++IC K  IP  +R+ +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYLYGIGWSRAREICEKTGIPCTKRLGELTPDELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T TNARTRK
Sbjct: 61  EQNYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRTNARTRK 111


>gi|187933579|ref|YP_001884499.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B]
 gi|188589031|ref|YP_001919698.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251779722|ref|ZP_04822642.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|226712717|sp|B2UYD6|RS13_CLOBA RecName: Full=30S ribosomal protein S13
 gi|226712718|sp|B2TIK1|RS13_CLOBB RecName: Full=30S ribosomal protein S13
 gi|187721732|gb|ACD22953.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B]
 gi|188499312|gb|ACD52448.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243084037|gb|EES49927.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 122

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +SQ I +   I P+ RV  L E EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLSTSQKILSTTGISPDARVKDLSEDEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|224437306|ref|ZP_03658278.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
 gi|313143761|ref|ZP_07805954.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
 gi|313128792|gb|EFR46409.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
          Length = 120

 Score =  144 bits (362), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS+DI   + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILKAVNISFDKRVFDLSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|253577205|ref|ZP_04854525.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843449|gb|EES71477.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 122

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I     I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKTTGINPDTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKTVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111


>gi|46199605|ref|YP_005272.1| 30S ribosomal protein S13 [Thermus thermophilus HB27]
 gi|55981636|ref|YP_144933.1| 30S ribosomal protein S13 [Thermus thermophilus HB8]
 gi|24212669|sp|P80377|RS13_THET8 RecName: Full=30S ribosomal protein S13
 gi|50401368|sp|P62655|RS13_THET2 RecName: Full=30S ribosomal protein S13
 gi|10835597|pdb|1FJG|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotics Streptomycin,
           Spectinomycin, And Paromomycin
 gi|13096406|pdb|1HR0|M Chain M, Crystal Structure Of Initiation Factor If1 Bound To The
           30s Ribosomal Subunit
 gi|13399804|pdb|1HNW|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Tetracycline
 gi|13399826|pdb|1HNX|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Pactamycin
 gi|13399848|pdb|1HNZ|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Hygromycin B
 gi|14278022|pdb|1GIX|P Chain P, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1gix, Contains The 30s Ribosome Subunit,
           Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
           In The File 1giy
 gi|14278068|pdb|1IBK|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotic Paromomycin
 gi|14278089|pdb|1IBL|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site And With The Antibiotic Paromomycin
 gi|14278113|pdb|1IBM|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site
 gi|15826132|pdb|1JGO|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826157|pdb|1JGP|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826182|pdb|1JGQ|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|20663898|pdb|1J5E|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit
 gi|24987759|pdb|1MJ1|P Chain P, Fitting The Ternary Complex Of Ef-TuTRNAGTP AND RIBOSOMAL
           Proteins Into A 13 A Cryo-Em Map Of The Coli 70s
           Ribosome
 gi|27065888|pdb|1N32|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The First Codon
           Position At The A Site With Paromomycin
 gi|27065915|pdb|1N33|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The Second Codon
           Position At The A Site With Paromomycin
 gi|27065942|pdb|1N34|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Codon And
           Crystallographically Disordered Near-Cognate Transfer
           Rna Anticodon Stem-Loop Mismatched At The First Codon
           Position
 gi|27065968|pdb|1N36|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Crystallographically
           Disordered Codon And Near-Cognate Transfer Rna Anticodon
           Stem-Loop Mismatched At The Second Codon Position
 gi|28373711|pdb|1ML5|P Chain P, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|58177412|pdb|1XMO|M Chain M, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
           With Aag-Mrna In The Decoding Center
 gi|58177435|pdb|1XMQ|M Chain M, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
           Decoding Center
 gi|58177476|pdb|1XNQ|M Chain M, Structure Of An Inosine-Adenine Wobble Base Pair Complex
           In The Context Of The Decoding Center
 gi|58177499|pdb|1XNR|M Chain M, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
           In The Context Of The Decoding Center
 gi|66361066|pdb|1YL4|P Chain P, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. 30s Subunit. The Coordinates For The 50s Subunit
           Are In The Pdb Entry 1yl3
 gi|88192248|pdb|2B64|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|88192311|pdb|2B9M|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400.
 gi|88192367|pdb|2B9O|M Chain M, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
           Structure Of The Whole Ribosomal Complex With A Stop
           Codon In The A-Site. This File Contains The 30s Subunit,
           Trnas And Mrna From A Crystal Structure Of The Whole
           Ribosomal Complex With A Stop Codon In The A-Site And Is
           Described In Remark 400.
 gi|110591335|pdb|2F4V|M Chain M, 30s Ribosome + Designer Antibiotic
 gi|116667666|pdb|2HHH|M Chain M, Crystal Structure Of Kasugamycin Bound To The 30s
           Ribosomal Subunit
 gi|116668209|pdb|2J00|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule I.
 gi|116668270|pdb|2J02|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule Ii.
 gi|119389724|pdb|2HGI|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
 gi|119389781|pdb|2HGP|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
 gi|119389837|pdb|2HGR|P Chain P, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
           Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgu.
 gi|149242720|pdb|2OW8|NN Chain n, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File
           1vsa.
 gi|149243630|pdb|2UU9|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gug-Codon In The
           A-Site And Paromomycin.
 gi|149243657|pdb|2UUA|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guc-Codon In The
           A-Site And Paromomycin.
 gi|149243684|pdb|2UUB|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guu-Codon In The
           A-Site And Paromomycin.
 gi|149243711|pdb|2UUC|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gua-Codon In The
           A-Site And Paromomycin.
 gi|149243850|pdb|2UXC|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Ucgu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836420|pdb|2UXB|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Gggu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836497|pdb|2V46|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836553|pdb|2V48|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158430912|pdb|2UXD|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Cggg In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|160285951|pdb|2QNH|NN Chain n, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 2qnh, Contains The 30s
           Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
           Ribosome Subunit Is In The File 1vsp.
 gi|186972861|pdb|2VQE|M Chain M, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|186972884|pdb|2VQF|M Chain M, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|209156508|pdb|3D5A|M Chain M, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156564|pdb|3D5C|M Chain M, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938831|pdb|2JL5|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938889|pdb|2JL7|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|218766785|pdb|3F1E|M Chain M, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766841|pdb|3F1G|M Chain M, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|226887386|pdb|2WDG|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule I.
 gi|226887411|pdb|2WDH|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule Ii.
 gi|226887500|pdb|2WDK|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule I.
 gi|226887557|pdb|2WDM|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule Ii.
 gi|237823541|pdb|2WH1|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823600|pdb|2WH3|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit.
 gi|260099998|pdb|3HUW|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule I.
 gi|260100054|pdb|3HUY|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule Ii.
 gi|261824496|pdb|2WRI|M Chain M, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 1 Of 4).
 gi|261824558|pdb|2WRK|M Chain M, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 3 Of 4).
 gi|261824620|pdb|2WRN|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 1 Of 4).
 gi|261824679|pdb|2WRQ|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 3 Of 4).
 gi|281307179|pdb|3KIQ|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 1 Of 4)
 gi|281307237|pdb|3KIS|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 3 Of 4)
 gi|281307295|pdb|3KIU|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 1 Of 4)
 gi|281307353|pdb|3KIX|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 3 Of 4)
 gi|288965616|pdb|3KNH|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule I
 gi|289526694|pdb|3KNJ|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule Ii'
 gi|289526719|pdb|3KNL|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule I
 gi|289526744|pdb|3KNN|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule Ii
 gi|294979516|pdb|3I8G|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979541|pdb|3I8H|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979600|pdb|3I9B|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
           The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979654|pdb|3I9D|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
           The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982087|pdb|2X9R|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982146|pdb|2X9T|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|307567974|pdb|2XFZ|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 1 Of 4)
 gi|307568032|pdb|2XG1|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 3 Of 4)
 gi|307776624|pdb|3OTO|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
           Mutant Of Thermus Thermophilus (Hb8)
 gi|309320247|pdb|3OGE|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320268|pdb|3OGY|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320349|pdb|3OHC|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320370|pdb|3OHD|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320451|pdb|3OHY|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320502|pdb|3OI0|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320553|pdb|3OI2|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320604|pdb|3OI4|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207685|pdb|2XQD|M Chain M, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754011|pdb|2XSY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754126|pdb|2XUY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533414|pdb|2Y0U|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533473|pdb|2Y0W|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533532|pdb|2Y0Y|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533591|pdb|2Y10|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533650|pdb|2Y12|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533709|pdb|2Y14|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533768|pdb|2Y16|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533827|pdb|2Y18|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|4519420|dbj|BAA75546.1| ribosomal protein S13 [Thermus thermophilus]
 gi|46197231|gb|AAS81645.1| SSU ribosomal protein S13P [Thermus thermophilus HB27]
 gi|55773049|dbj|BAD71490.1| 30S ribosomal protein S13 [Thermus thermophilus HB8]
          Length = 126

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|254779838|ref|YP_003057944.1| 30S ribosomal protein S13 [Helicobacter pylori B38]
 gi|254001750|emb|CAX29981.1| 30S ribosomal subunit protein S13 [Helicobacter pylori B38]
 gi|317178413|dbj|BAJ56201.1| 30S ribosomal protein S13 [Helicobacter pylori F30]
          Length = 120

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + +  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|317182542|dbj|BAJ60326.1| 30S ribosomal protein S13 [Helicobacter pylori F57]
          Length = 120

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQGYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|304315966|ref|YP_003851111.1| 30S ribosomal protein S13 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|323706476|ref|ZP_08118037.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|302777468|gb|ADL68027.1| 30S ribosomal protein S13 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|323534196|gb|EGB23986.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 122

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG   S +I  K  + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEVSRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR V++NIKRL+D+GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTNARTRK 111


>gi|317013083|gb|ADU83691.1| 30S ribosomal protein S13 [Helicobacter pylori Lithuania75]
          Length = 120

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELNEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|39997926|ref|NP_953877.1| 30S ribosomal protein S13 [Geobacter sulfurreducens PCA]
 gi|81701334|sp|Q749B0|RS13_GEOSL RecName: Full=30S ribosomal protein S13
 gi|39984871|gb|AAR36227.1| ribosomal protein S13 [Geobacter sulfurreducens PCA]
 gi|298506864|gb|ADI85587.1| ribosomal protein S13 [Geobacter sulfurreducens KN400]
          Length = 122

 Score =  143 bits (360), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI GIG  ++Q I  +  +  + R   L ESEV +IR  I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR V+M+IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  DKNLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|188584862|ref|YP_001916407.1| SSU ribosomal protein S13P [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226712768|sp|B2A4P7|RS13_NATTJ RecName: Full=30S ribosomal protein S13
 gi|179349549|gb|ACB83819.1| SSU ribosomal protein S13P [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 121

 Score =  143 bits (360), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   +++I  +  +  + RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRNKRVAIGLTYIYGIGHSKAEEIVEQTGVSTDTRVKDLTEDEVNRLRSTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR ++MNIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DNDYTVEGDLRREISMNIKRLMEIGCYRGLRHRRGLPVRGQSTKNNARTRK 111


>gi|260893347|ref|YP_003239444.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
 gi|260865488|gb|ACX52594.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
          Length = 123

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG  S++ I  K  + P+ RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDLPKDKRVEIALTYIYGIGRSSAKKILEKTGVNPDTRVKDLTEDEIARIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR +AMNI+RL+D+ CYRG+RH RGLPVRGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRREIAMNIRRLIDIRCYRGIRHIRGLPVRGQRTRTNARTRK 111


>gi|34558007|ref|NP_907822.1| 30S ribosomal protein S13 [Wolinella succinogenes DSM 1740]
 gi|81653421|sp|Q7M8F4|RS13_WOLSU RecName: Full=30S ribosomal protein S13
 gi|34483725|emb|CAE10722.1| 30S RIBOSOMAL PROTEIN S13 [Wolinella succinogenes]
          Length = 122

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG K+S+DI + + I  ++RV +L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKTSRDILSAVNISLDKRVQELSEDEVSLISKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QESYAVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|268680564|ref|YP_003304995.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946]
 gi|268618595|gb|ACZ12960.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946]
          Length = 122

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KRV   L YI+GIG  SS+ I     I  ++RVH+L E +V  IR+ I
Sbjct: 1   MARIAGVDLPMKKRVEYGLTYIYGIGLTSSRAILTATGISFDKRVHELSEDDVAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  +QVEGDLR+ VAM+IK LMD+G YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QAGFQVEGDLRKKVAMDIKALMDMGSYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|302388737|ref|YP_003824558.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646]
 gi|302199365|gb|ADL06935.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646]
          Length = 123

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG   S  I  +  + P+ RV  L E E+  +R  I
Sbjct: 1   MARIAGVDLPKDKRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKNYKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNARTRK 111


>gi|315453713|ref|YP_004073983.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
 gi|315132765|emb|CBY83393.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
          Length = 120

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI +K+ I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILHKVGISLDKRVHELGEDEVSSITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + ++ VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QANHIVEGDLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|109946780|ref|YP_664008.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba]
 gi|123173598|sp|Q17ZB7|RS13_HELAH RecName: Full=30S ribosomal protein S13
 gi|109714001|emb|CAJ99009.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba]
 gi|307637967|gb|ADN80417.1| SSU ribosomal protein S13p:S18e [Helicobacter pylori 908]
 gi|325996572|gb|ADZ51977.1| 30S ribosomal protein S13 [Helicobacter pylori 2018]
 gi|325998162|gb|ADZ50370.1| 30S ribosomal protein S13 [Helicobacter pylori 2017]
          Length = 120

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E E   I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEASSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|251772515|gb|EES53081.1| ribosomal protein S13 [Leptospirillum ferrodiazotrophum]
          Length = 124

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KR+  AL YI G+G  +SQ I  K  + P+ RVH L + EV ++R+A+
Sbjct: 1   MARIVGIDLPRNKRIEIALTYIFGVGKPTSQLILKKAGVNPDTRVHALTDDEVAKLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E    VEGDLRR ++ NIKR MD+GCY+GLRHR+GLPVRGQRT TNARTRK   KG  A+
Sbjct: 61  ETTCSVEGDLRREISQNIKRKMDIGCYQGLRHRKGLPVRGQRTKTNARTRKGPKKGIGAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218294779|ref|ZP_03495633.1| ribosomal protein S13 [Thermus aquaticus Y51MC23]
 gi|218244687|gb|EED11211.1| ribosomal protein S13 [Thermus aquaticus Y51MC23]
          Length = 126

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGIGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENAWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|315587185|gb|ADU41566.1| 30S ribosomal protein S13 [Helicobacter pylori 35A]
          Length = 120

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG K+S++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKNSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|320451276|ref|YP_004203372.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01]
 gi|320151445|gb|ADW22823.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01]
          Length = 126

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+G+G   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGVGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|317485799|ref|ZP_07944663.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6]
 gi|316922905|gb|EFV44127.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6]
          Length = 122

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR   AL YI+GIG  ++  I +   +   R +  L   E+ ++R+ +
Sbjct: 1   MARIAGVDLPRGKRADIALTYIYGIGRVTALKILDASGVNWTRGIDDLTAEELNEVRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ Y+VEGDLRR ++MNIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQSYKVEGDLRREISMNIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114778800|ref|ZP_01453607.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
 gi|114550931|gb|EAU53495.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
          Length = 122

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG  SS+ I     I    RV  L + EV +IR  I
Sbjct: 1   MARIAGVNIPTQKRVEIALTYIYGIGHTSSKAILASAGIDVNTRVKDLSDGEVDKIRSLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V M+IKRL DLGCYRGLRHR+GLPVRGQR+ TNARTRK
Sbjct: 61  DADYAVEGDLRREVTMSIKRLTDLGCYRGLRHRKGLPVRGQRSKTNARTRK 111


>gi|239787585|emb|CAX84053.1| 30S ribosomal protein S13 [uncultured bacterium]
          Length = 120

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/111 (65%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+  AL YI GIG + S+ I  +  +  E R   L E+E  +IR  I
Sbjct: 1   MARIAGVNIPINKRMEVALTYIFGIGPERSKKILKEAGVSTEVRARDLSEAETARIRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++DY VEGDLRR VAMN KRLMDLG YRGLRHRRGLP RGQRTHTNARTRK
Sbjct: 61  DKDYVVEGDLRRQVAMNTKRLMDLGTYRGLRHRRGLPTRGQRTHTNARTRK 111


>gi|320335499|ref|YP_004172210.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211]
 gi|319756788|gb|ADV68545.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211]
          Length = 126

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   ++++  +  + P+ RV  L E+E  Q+R AI
Sbjct: 1   MARIAGVDLPREKRIEIALTYIYGIGLTRAKEVLAQTGVNPDTRVKNLSEAEQGQLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ ++VEGDLR  +  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKTFKVEGDLRSEIGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|319955879|ref|YP_004167142.1| SSU ribosomal protein s13p [Nitratifractor salsuginis DSM 16511]
 gi|319418283|gb|ADV45393.1| SSU ribosomal protein S13P [Nitratifractor salsuginis DSM 16511]
          Length = 120

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  SS+ I +   I  ++RV++L ++E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMEYALTYIYGIGLTSSRKILDATGISYDKRVYELTDAEAATIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  QEHYMVEGDLRKKVMMDIKTLMDLGNYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|325510514|gb|ADZ22150.1| 30S ribosomal protein S13 [Clostridium acetobutylicum EA 2018]
          Length = 125

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  SS+ I    ++ PE RV  L E EV  +R  I
Sbjct: 3   MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 63  NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 113


>gi|322380606|ref|ZP_08054758.1| 30S ribosomal protein S13 [Helicobacter suis HS5]
 gi|321146928|gb|EFX41676.1| 30S ribosomal protein S13 [Helicobacter suis HS5]
          Length = 120

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI  K+ I  ++RVH L E ++  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|322378757|ref|ZP_08053186.1| 30S ribosomal protein S13 [Helicobacter suis HS1]
 gi|321148787|gb|EFX43258.1| 30S ribosomal protein S13 [Helicobacter suis HS1]
          Length = 122

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI  K+ I  ++RVH L E ++  I + I
Sbjct: 3   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 63  QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 113


>gi|115376113|ref|ZP_01463358.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1]
 gi|310821019|ref|YP_003953377.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1]
 gi|115366928|gb|EAU65918.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1]
 gi|309394091|gb|ADO71550.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1]
          Length = 128

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 86/116 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P AKR V +L YI+GIG K++ +IC    I    R   L + +  +IR  I
Sbjct: 1   MARIAGVDLPPAKRAVISLQYIYGIGNKTAHEICAAAGIDLTTRTKDLTDEQARKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           E + +VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTN+RTRK   +G
Sbjct: 61  EANLKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNSRTRKGPKRG 116


>gi|125975410|ref|YP_001039320.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405]
 gi|256005303|ref|ZP_05430269.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
 gi|281419372|ref|ZP_06250387.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
 gi|158706224|sp|A3DJJ8|RS13_CLOTH RecName: Full=30S ribosomal protein S13
 gi|125715635|gb|ABN54127.1| SSU ribosomal protein S13P [Clostridium thermocellum ATCC 27405]
 gi|255990739|gb|EEU00855.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
 gi|281406992|gb|EFB37255.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
 gi|316939526|gb|ADU73560.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313]
          Length = 123

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S +I  K  I P+ RV  L + E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRTLSNEILRKTGINPDTRVKDLTDEEISKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR +A+NIKRLM++GCYRG RHR GLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKEYKVEGDLRREIALNIKRLMEIGCYRGRRHRAGLPVRGQRTKTNARTRKGPKKTVGVQ 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|148263162|ref|YP_001229868.1| 30S ribosomal protein S13 [Geobacter uraniireducens Rf4]
 gi|189044277|sp|A5GAU3|RS13_GEOUR RecName: Full=30S ribosomal protein S13
 gi|146396662|gb|ABQ25295.1| SSU ribosomal protein S13P [Geobacter uraniireducens Rf4]
          Length = 122

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  ++Q I     +    R   L ESE+ +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRSTAQKILADAGVDSNTRSDNLTESEIARIRENI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK
Sbjct: 61  DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRK 111


>gi|301057490|ref|ZP_07198586.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2]
 gi|300448418|gb|EFK12087.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2]
          Length = 122

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  SSQ +  +  I  + +  +L   ++  IR+ I
Sbjct: 1   MARIAGVDLPKGKRIEIALTYIYGIGRTSSQKMLTEAGINWDTKSDELTSEQIASIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR V+MNIKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DEKYTVEGDLRREVSMNIKRLMDLGLYRGLRHRRGLPVRGQRTSTNARTRK 111


>gi|149195171|ref|ZP_01872262.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2]
 gi|149134723|gb|EDM23208.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2]
          Length = 122

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K++  AL YI+GIG  +S+ I     I P +RV++L E EV  + + I
Sbjct: 1   MARIAGIDLPKNKKIEYALPYIYGIGLTTSRKILKDTGIDPNKRVYELTEDEVSILNKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  QNNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|15896358|ref|NP_349707.1| 30S ribosomal protein S13 [Clostridium acetobutylicum ATCC 824]
 gi|32363381|sp|Q97EK3|RS13_CLOAB RecName: Full=30S ribosomal protein S13
 gi|15026173|gb|AAK81047.1|AE007807_5 Ribosomal protein S13 [Clostridium acetobutylicum ATCC 824]
          Length = 123

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  SS+ I    ++ PE RV  L E EV  +R  I
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|312899069|ref|ZP_07758453.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359]
 gi|310619854|gb|EFQ03430.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359]
          Length = 122

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SSQ+I  K  I P+ RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSSSQEILAKTGINPDTRVRDLTEDEVQKIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK
Sbjct: 61  GEEYKVEGDLRRETALNIKRLIEVNSYRGKRHRSGLPLRGQRTKTNARTRK 111


>gi|288574687|ref|ZP_06393044.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570428|gb|EFC91985.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 122

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI GIG  +S+ I     + P+ RV  L E E  ++R  I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIFGIGLTTSKKILATTGVNPDTRVKDLTEEETQKLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y VEGDLRR V MNIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  QNGYTVEGDLRREVTMNIKRLMDIGCYRGIRHRQGLPLRGQRTKTNARTRK 111


>gi|291277245|ref|YP_003517017.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
 gi|290964439|emb|CBG40289.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
          Length = 120

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL +I+GIG K S+DI N + I  ++RVH L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTHIYGIGLKISRDILNAVNISFDKRVHDLSEDEVSAIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QESYMVEGDLRKKVQMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|226356868|ref|YP_002786608.1| 30S ribosomal protein S13 [Deinococcus deserti VCD115]
 gi|259494671|sp|C1CXD7|RS13_DEIDV RecName: Full=30S ribosomal protein S13
 gi|226318858|gb|ACO46854.1| putative 30S ribosomal protein S13 [Deinococcus deserti VCD115]
          Length = 126

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  +  I  + RV  L E+E   +R AI
Sbjct: 1   MARVAGVDLPREKRIEIALTYIYGIGLTRSKEVLAQTGISADTRVKNLTEAEQSTLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ ++VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKTFKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|317131395|ref|YP_004090709.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
 gi|315469374|gb|ADU25978.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
          Length = 122

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV   L YI GIG KS+ DI     I P+ RV  L E +V  +R  I
Sbjct: 1   MARIAGVNLPNEKRVEIGLTYIFGIGRKSADDIIKATGINPDIRVKDLTEEQVSLLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DKEYTIEGDLRRRVALNIKRLVEVGCYRGVRHRKGLPVRGQRTKTNARTRK 111


>gi|288818041|ref|YP_003432388.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
 gi|288787440|dbj|BAI69187.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
 gi|308751642|gb|ADO45125.1| 30S ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
          Length = 126

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL Y++GIG+  S++IC K  IP  +R+ +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYLYGIGWSRSREICQKTGIPCTKRLGELTPDELNTIRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y+VEGDLRR V MNIKRLMD+G YRG+RH RGLPVRGQ+T TN+RTRK
Sbjct: 61  EQNYKVEGDLRREVQMNIKRLMDMGSYRGIRHSRGLPVRGQQTRTNSRTRK 111


>gi|308070949|ref|YP_003872554.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681]
 gi|310644174|ref|YP_003948933.1| 30S ribosomal protein s13 [Paenibacillus polymyxa SC2]
 gi|305860228|gb|ADM72016.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681]
 gi|309249125|gb|ADO58692.1| 30S ribosomal protein S13 [Paenibacillus polymyxa SC2]
          Length = 122

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I  +  I    RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKETGISANTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKEVKVEGDLRREISLNIKRLTEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111


>gi|169830461|ref|YP_001716443.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C]
 gi|226712730|sp|B1I1M4|RS13_DESAP RecName: Full=30S ribosomal protein S13
 gi|169637305|gb|ACA58811.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C]
          Length = 123

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI+GIG  S++ +  ++ + PE RV  L E E+ ++R  I
Sbjct: 1   MARISGVDLPRDKRVEVALTYIYGIGRSSAKQLLEQVNVNPETRVRDLTEEEISRLRDLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR V++NIKRL+++G YRGLRHRRGLPV GQRT TNARTRK   K  GV 
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLIEIGSYRGLRHRRGLPVWGQRTRTNARTRKGPKKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|146329476|ref|YP_001210130.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A]
 gi|158706228|sp|A5EX97|RS13_DICNV RecName: Full=30S ribosomal protein S13
 gi|146232946|gb|ABQ13924.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A]
          Length = 118

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   +++IC K  + P++++  L +SEV  +RQ +
Sbjct: 1   MARIAGINVPTQKHAVIALTSIYGIGTSRAKEICAKANVAPDKKIRDLSDSEVEALRQVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + YQVEGDLRR V+M+IKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  SE-YQVEGDLRRQVSMDIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|332178478|gb|AEE14167.1| 30S ribosomal protein S13 [Thermodesulfobium narugense DSM 14796]
          Length = 123

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++   K+   AL YI+GIG   +  I N   + PE+R+ +L E E+I++R  +
Sbjct: 1   MARIAGVDLAENKKAWVALTYIYGIGKPLAFKILNATGVDPEKRIKELSEDEIIKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR VA NI+RL+DLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EKNYKVEGDLRREVAQNIRRLIDLGTYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|323703523|ref|ZP_08115169.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574]
 gi|323531514|gb|EGB21407.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574]
          Length = 123

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR   AL YI+GIG  ++Q I  +  + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRTEIALTYIYGIGRPTAQKILAQTGVNPDTRVKDLTEEEVNKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++ +VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNIKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|317054792|ref|YP_004103259.1| 30S ribosomal protein S13 [Ruminococcus albus 7]
 gi|315447061|gb|ADU20625.1| 30S ribosomal protein S13 [Ruminococcus albus 7]
          Length = 122

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL Y++GIG K++  I  +  + P+ RV  + E +V ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +  VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|289523343|ref|ZP_06440197.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503035|gb|EFD24199.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 127

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG  S++ I     I P+ RV  L E E+ ++++ I
Sbjct: 1   MARIAGIDLPRDKRVEIALTYIYGIGLPSAKKILASTGISPDTRVKDLTEDEINKLQREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR V  NIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  ENNHKVEGDLRREVNANIKRLIDIGCYRGLRHRLGLPVRGQRTRTNARTRK 111


>gi|116749014|ref|YP_845701.1| 30S ribosomal protein S13 [Syntrophobacter fumaroxidans MPOB]
 gi|158706289|sp|A0LIL4|RS13_SYNFM RecName: Full=30S ribosomal protein S13
 gi|116698078|gb|ABK17266.1| SSU ribosomal protein S13P [Syntrophobacter fumaroxidans MPOB]
          Length = 124

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  ++Q I  +  I    +   L E+++  IR  I
Sbjct: 1   MARIAGIDLPKNKRIEIALTYIYGIGRPTAQKILEQANIDGNTKSDDLTENQINSIRHVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLR  V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DSHYKVEGDLRTEVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111


>gi|307718228|ref|YP_003873760.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192]
 gi|306531953|gb|ADN01487.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192]
          Length = 121

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  S++ IC K  IP E +V +L   +V ++RQ I
Sbjct: 1   MARIAGVDLPN-KQIQIALTYIYGIGRASARKICEKTGIPYETKVSELTSDQVQKLRQVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 60  ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRK 110


>gi|14278542|pdb|1I94|M Chain M, Crystal Structures Of The Small Ribosomal Subunit With
           Tetracycline, Edeine And If3
 gi|14278563|pdb|1I95|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Edeine
 gi|14278584|pdb|1I96|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With The Translation
           Initiation Factor If3 (C-Terminal Domain)
 gi|14278606|pdb|1I97|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Tetracycline
 gi|34811541|pdb|1PNS|M Chain M, Crystal Structure Of A Streptomycin Dependent Ribosome
           From E. Coli, 30s Subunit Of 70s Ribosome. This File,
           1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
           Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
 gi|34811597|pdb|1PNX|M Chain M, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
           Only Molecules Of The 30s Ribosomal Subunit. The 50s
           Subunit Is In The Pdb File 1pny.
 gi|56966335|pdb|1VOQ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966388|pdb|1VOS|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966441|pdb|1VOV|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966494|pdb|1VOX|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966547|pdb|1VOZ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|149241287|pdb|2E5L|M Chain M, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
           The Shine- Dalgarno Interaction
 gi|170292340|pdb|2R1G|I Chain I, Coordinates Of The Thermus Thermophilus 30s Components
           Neighboring Rbfa As Obtained By Fitting Into The Cryo-Em
           Map Of A 30s-Rbfa Complex
 gi|224510701|pdb|3FIC|M Chain M, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 30s Subunit
           And The Ligands
 gi|226887641|pdb|2ZM6|M Chain M, Crystal Structure Of The Thermus Thermophilus 30s
           Ribosomal Subunit
          Length = 125

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 84/110 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|315186309|gb|EFU20070.1| SSU ribosomal protein S13P [Spirochaeta thermophila DSM 6578]
          Length = 121

 Score =  140 bits (354), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  S++ IC +  IP E +V +L   +V ++RQ I
Sbjct: 1   MARIAGVDLPN-KQIQIALTYIYGIGRSSARKICERTGIPYETKVSELTSDQVQKLRQVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y VEG LR  VA+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 60  ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
 gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
          Length = 119

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV +PR K++  AL YI+GIG   S +I  K  I P++R H+L   E+ +IR  I
Sbjct: 1   MARIAGVELPRNKKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             DY+VEG+LR+ VAMNIK LMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  -ADYKVEGELRKEVAMNIKALMDLGNYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|300508617|pdb|3MR8|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508672|pdb|3MS0|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s)
          Length = 117

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 84/110 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|322812562|pdb|3PYN|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812615|pdb|3PYQ|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome.
 gi|322812668|pdb|3PYS|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812721|pdb|3PYU|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The Second 70s Ribosome
          Length = 116

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 84/110 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|86609043|ref|YP_477805.1| 30S ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123502213|sp|Q2JL76|RS13_SYNJB RecName: Full=30S ribosomal protein S13
 gi|86557585|gb|ABD02542.1| ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 127

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/111 (63%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   S+ I  K  I P+ R   L ++EV  +R  +
Sbjct: 1   MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRK 111


>gi|325678627|ref|ZP_08158237.1| 30S ribosomal protein S13 [Ruminococcus albus 8]
 gi|324109677|gb|EGC03883.1| 30S ribosomal protein S13 [Ruminococcus albus 8]
          Length = 122

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL Y++GIG K++  I  +  + P+ RV  + E +V ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +  VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|326203870|ref|ZP_08193732.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782]
 gi|325985968|gb|EGD46802.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782]
          Length = 122

 Score =  140 bits (353), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S +I  K  + P+ RV  L + E+ +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRPKSNEILVKTGVSPDTRVRDLTDDEINKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR +A+NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRREIALNIKRLIEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111


>gi|255994831|ref|ZP_05427966.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989]
 gi|255993544|gb|EEU03633.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989]
          Length = 132

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P  KR+   L Y++GIG   S++I  K  + P+ RV  L E EV +IR+ I
Sbjct: 11  MARLAGVDLPNDKRIEIGLTYVYGIGNTKSKEILAKAKVDPDTRVKDLTEDEVGEIRKVI 70

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++ VEGDLRR  +MNIKRLM++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 71  ENEHMVEGDLRRENSMNIKRLMEIGCYRGIRHRKGLPVRGQKTKTNARTRK 121


>gi|154148745|ref|YP_001405815.1| 30S ribosomal protein S13 [Campylobacter hominis ATCC BAA-381]
 gi|166231907|sp|A7HZX4|RS13_CAMHC RecName: Full=30S ribosomal protein S13
 gi|153804754|gb|ABS51761.1| ribosomal protein S13p/S18e [Campylobacter hominis ATCC BAA-381]
          Length = 127

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L YI+GIG  +S+ I +   I  ++RV  L E EV  IR+ I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYIYGIGLFTSRKILDATGISYDKRVADLSEDEVAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ V+MNIK LMDLGCYRGLRH +GLPVRGQ+T TNARTRK
Sbjct: 61  QEHYMVEGDLRKEVSMNIKSLMDLGCYRGLRHIKGLPVRGQKTKTNARTRK 111


>gi|84685393|ref|ZP_01013291.1| 30S ribosomal protein S13 [Maritimibacter alkaliphilus HTCC2654]
 gi|84666550|gb|EAQ13022.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2654]
          Length = 116

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 84/116 (72%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           +NIP  KRV  AL YI GIG  S++ IC    I   RRV++L ++EV+ IR+ I+ +Y V
Sbjct: 1   MNIPTHKRVPIALTYITGIGHTSAKSICEATNIDVTRRVNELSDAEVLTIREHIDANYTV 60

Query: 67  EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           EGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K+
Sbjct: 61  EGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGKKK 116


>gi|85858170|ref|YP_460372.1| 30S ribosomal protein S13 [Syntrophus aciditrophicus SB]
 gi|123515694|sp|Q2LQD2|RS13_SYNAS RecName: Full=30S ribosomal protein S13
 gi|85721261|gb|ABC76204.1| SSU ribosomal protein S13P [Syntrophus aciditrophicus SB]
          Length = 122

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG   +++I  K  I  + +  +L +SE+  IR  I
Sbjct: 1   MARIAGVDLPKNKRMEIALTYIYGIGRTKAKEILEKAEISFDTKTDELADSEINAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++D++VEGDLRR ++M+IKRLMD+G YRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DRDHKVEGDLRRDISMSIKRLMDVGAYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|95930499|ref|ZP_01313235.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684]
 gi|95133539|gb|EAT15202.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684]
          Length = 122

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  +SQ I ++  +    R   L E+EV QIR+ I
Sbjct: 1   MARIAGIDLPKNKRIEVALTYIYGIGRSTSQHILSQAGVDFSTRSDDLTEAEVGQIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + +VEGDLRR V+MNIKR+MDLG YRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DDELKVEGDLRREVSMNIKRMMDLGNYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|224370668|ref|YP_002604832.1| 30S ribosomal protein S13 [Desulfobacterium autotrophicum HRM2]
 gi|259494673|sp|C0Q9V0|RS13_DESAH RecName: Full=30S ribosomal protein S13
 gi|223693385|gb|ACN16668.1| RpsM [Desulfobacterium autotrophicum HRM2]
          Length = 122

 Score =  140 bits (352), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K V  AL YI+GIG   SQ I  K+ I P  +   L E +V  IR+ I
Sbjct: 1   MARIAGVDLPRNKHVEIALTYIYGIGRTRSQQILEKVGINPTLKSDALTEEQVNDIRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D++VEG+LR  ++MNIKRLMDLGCYRGLRHR+ LP RGQRT TNARTRK   +  V +
Sbjct: 61  DSDFKVEGELRTQISMNIKRLMDLGCYRGLRHRKSLPCRGQRTSTNARTRKGPKRAAVKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|158520747|ref|YP_001528617.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3]
 gi|226712731|sp|A8ZV79|RS13_DESOH RecName: Full=30S ribosomal protein S13
 gi|158509573|gb|ABW66540.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3]
          Length = 127

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I NKL+I  + +V QL E+E+  IR A+
Sbjct: 1   MARIAGVDLPKRKRVEIGLTYIYGIGRSTSRQILNKLSIDYDTKVDQLTETEINAIRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++VEG+LR  V+MNIKRLMDLGCYRGLRHR+ LP  GQRT TNARTRK
Sbjct: 61  TNEHKVEGELRTEVSMNIKRLMDLGCYRGLRHRKSLPCHGQRTSTNARTRK 111


>gi|15605671|ref|NP_213046.1| 30S ribosomal protein S13 [Aquifex aeolicus VF5]
 gi|6226059|sp|O66486|RS13_AQUAE RecName: Full=30S ribosomal protein S13
 gi|2982822|gb|AAC06445.1| ribosomal protein S13 [Aquifex aeolicus VF5]
          Length = 126

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG+  +++IC K  IP  +RV +L   E+  +R+ I
Sbjct: 1   MARIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDELNTLRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR V +NIK+L D+GCYRG+RH RGLPVRGQ+T TNARTRK
Sbjct: 61  DENYKVEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQQTRTNARTRK 111


>gi|197117347|ref|YP_002137774.1| 30S ribosomal protein S13 [Geobacter bemidjiensis Bem]
 gi|253701898|ref|YP_003023087.1| 30S ribosomal protein S13 [Geobacter sp. M21]
 gi|226712741|sp|B5EFS4|RS13_GEOBB RecName: Full=30S ribosomal protein S13
 gi|259494680|sp|C6E4N3|RS13_GEOSM RecName: Full=30S ribosomal protein S13
 gi|197086707|gb|ACH37978.1| ribosomal protein S13 [Geobacter bemidjiensis Bem]
 gi|251776748|gb|ACT19329.1| ribosomal protein S13 [Geobacter sp. M21]
          Length = 122

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ+I     +    R   L E+EV +IR+ I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTAAGVDMNTRCDNLTEAEVTKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 61  DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111


>gi|325282665|ref|YP_004255206.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP]
 gi|324314474|gb|ADY25589.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP]
          Length = 125

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  I  + R+  L E+E   +R AI
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTRSREILERTGINADTRIKDLSEAEQSTLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|134298118|ref|YP_001111614.1| 30S ribosomal protein S13 [Desulfotomaculum reducens MI-1]
 gi|172044236|sp|A4J136|RS13_DESRM RecName: Full=30S ribosomal protein S13
 gi|134050818|gb|ABO48789.1| SSU ribosomal protein S13P [Desulfotomaculum reducens MI-1]
          Length = 123

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR   AL YI+GIG  ++Q I  +  + P+ R+  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRAEIALTYIYGIGKPTAQKILAQTGVNPDTRIKDLTEEEVNKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKNTKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111


>gi|322418388|ref|YP_004197611.1| 30S ribosomal protein S13 [Geobacter sp. M18]
 gi|320124775|gb|ADW12335.1| 30S ribosomal protein S13 [Geobacter sp. M18]
          Length = 122

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ+I     +    R   L E+EV +IR+ I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTATGVDMNTRCDNLTEAEVAKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 61  DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111


>gi|330814178|ref|YP_004358417.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487273|gb|AEA81678.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 127

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+N+P  K+V  AL YI+GIG   ++ IC +L I   +RV+ L E EV+++R+ I
Sbjct: 1   MARISGINLPLNKQVYIALQYIYGIGDHYAEKICKELNIDRSKRVNNLTEDEVLKVRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRTH+NARTRK
Sbjct: 61  DKNYSVEGDLRRDISLNIKRLRDLGTYRGTRHRKKLPVRGQRTHSNARTRK 111


>gi|167629493|ref|YP_001679992.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1]
 gi|226712743|sp|B0TC82|RS13_HELMI RecName: Full=30S ribosomal protein S13
 gi|167592233|gb|ABZ83981.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1]
          Length = 123

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI GIG  ++  I  +  I P+ R   L + EV ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIAIALTYIFGIGRPTADKILAETGINPDTRTRDLTDEEVARLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKNVEVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|310829559|ref|YP_003961916.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612]
 gi|308741293|gb|ADO38953.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  +L I P+ RV  L E+EV  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIYGIGRPTSNKILKELNINPDTRVKDLTENEVNALRNIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR V +NIKRL+++G YRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DEKYTVEGDLRREVNLNIKRLIEIGSYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|302669988|ref|YP_003829948.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316]
 gi|302394461|gb|ADL33366.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316]
          Length = 157

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I     + P+ RV  L + EV +I + I
Sbjct: 36  MARIAGVDLPRDKRVEIGLTYIYGIGRTSSNKILEAAKVNPDTRVRDLTDDEVKKIAEII 95

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             DY VEGDLRR VAMNIKRL ++GC+RG+RHRRGLP RGQRT TNARTRK
Sbjct: 96  GNDYDVEGDLRREVAMNIKRLTEIGCFRGMRHRRGLPCRGQRTKTNARTRK 146


>gi|290968218|ref|ZP_06559761.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781700|gb|EFD94285.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG  SSQ+I  K  I P+ RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIFGIGLSSSQEILKKTGINPDTRVRDLTEDEVQKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEGDLRR  AMN+KRL+++  YRG RHR GLPVRGQR+ TNARTRK
Sbjct: 61  GSEYKVEGDLRREGAMNVKRLIEINSYRGKRHRAGLPVRGQRSKTNARTRK 111


>gi|183221325|ref|YP_001839321.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911416|ref|YP_001962971.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226712754|sp|B0SA23|RS13_LEPBA RecName: Full=30S ribosomal protein S13
 gi|226712755|sp|B0SSF5|RS13_LEPBP RecName: Full=30S ribosomal protein S13
 gi|167776092|gb|ABZ94393.1| 30S Ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779747|gb|ABZ98045.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 125

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+V  L YI GIG  SSQ+I  K  I    RV  L +     IR+ I
Sbjct: 1   MARIAGVDLPSNKRIVIGLTYIFGIGKTSSQNILKKAGIDESIRVKDLSDEHEAAIRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ YQVEGDLR  V +NIKRLMD+GCYRG RHRRGLPV GQRT TNARTRK
Sbjct: 61  EESYQVEGDLRSEVNLNIKRLMDVGCYRGFRHRRGLPVNGQRTRTNARTRK 111


>gi|302876508|ref|YP_003845141.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
 gi|307687180|ref|ZP_07629626.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
 gi|302579365|gb|ADL53377.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KRV  AL YI+GIG  +SQ I ++  + P+ RV  L E EV  +R  I
Sbjct: 1   MARIAGIDIPKEKRVEIALTYIYGIGLPTSQRILSETGVNPDTRVKNLTEDEVNLLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR +A+NIKRL+++GCYRG+RHRR LPVRGQ+T TNARTRK
Sbjct: 61  NKTVKVEGDLRREIALNIKRLVEIGCYRGIRHRRNLPVRGQKTKTNARTRK 111


>gi|221632954|ref|YP_002522177.1| 30S ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159]
 gi|254811173|sp|B9KZW3|RS13_THERP RecName: Full=30S ribosomal protein S13
 gi|221156457|gb|ACM05584.1| ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159]
          Length = 128

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL  I+GIG+ +++ I  +  I P  +V  L + EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRIEYALTLIYGIGWTTARKILERTGIDPWTKVRDLTDDEVQRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++  VEGDLRR VAMNIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  EKEMVVEGDLRRQVAMNIKRLIDIGCYRGLRHRMGLPVRGQRTRTNARTRK 111


>gi|225016260|ref|ZP_03705452.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum
           DSM 5476]
 gi|224950935|gb|EEG32144.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum
           DSM 5476]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG K+++DI     + P+ RV  L E E  ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVALTYIFGIGQKTAKDIIAATGVNPDTRVRDLTEDEASKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++  VEGDLRR VA+NIKRL+++ CYRG RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DKNLMVEGDLRRDVALNIKRLIEINCYRGTRHRKGLPVRGQKTKTNARTRK 111


>gi|296272959|ref|YP_003655590.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299]
 gi|296097133|gb|ADG93083.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299]
          Length = 120

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI GIG  +S+ I +   I  ++R H+L E E   IR  I
Sbjct: 1   MARIAGVDLPNKKRMEYALTYIFGIGLYNSRLILDATGISYDKRAHELTEDEAAAIRLEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++YQVEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK
Sbjct: 61  QKNYQVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 111


>gi|94987421|ref|YP_595354.1| 30S ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00]
 gi|158706242|sp|Q1MPP4|RS13_LAWIP RecName: Full=30S ribosomal protein S13
 gi|94731670|emb|CAJ55033.1| ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR   AL YI+G+G  ++  + + + I   R +  L   E+ ++R+ +
Sbjct: 1   MARIAGIDLPRGKRSDIALSYIYGVGRVTALKVLDAVGINWSRSIDDLSAEELNEVRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEG+LRR V+ NIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK   KG V +
Sbjct: 61  EKNYKVEGELRREVSANIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|261854971|ref|YP_003262254.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2]
 gi|261835440|gb|ACX95207.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2]
          Length = 118

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K VV AL  I+GIG   +Q IC    + P R+V  L ESEV  +R  +
Sbjct: 1   MARIAGINIPVQKHVVIALTSIYGIGTTRAQAICQASGVEPSRKVRDLSESEVEALRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-FIVEGDLRRDVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|295694863|ref|YP_003588101.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912]
 gi|295410465|gb|ADG04957.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912]
          Length = 122

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S  I  +  + P+ RV  L + EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRPMSNRILRETGVNPDTRVRDLTDEEVARLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR VAMNIKRL ++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DRNLKVEGDLRRDVAMNIKRLTEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|258543841|ref|ZP_05704075.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826]
 gi|258520930|gb|EEV89789.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826]
          Length = 118

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   ++DIC    + P +++  L ++EV  +R A+
Sbjct: 1   MARIAGINVPTQKHTVIALTSIYGIGPTRARDICVAAKVEPSKKIRDLSDAEVDALRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + YQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AE-YQVEGDLRRQVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|195952668|ref|YP_002120958.1| 30S ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1]
 gi|226712748|sp|B4U769|RS13_HYDS0 RecName: Full=30S ribosomal protein S13
 gi|195932280|gb|ACG56980.1| ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1]
          Length = 126

 Score =  139 bits (349), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG+  ++++C +  IP  +++ +L   E+ Q+R+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYIYGIGWSKAREVCEQTGIPSIKKLGELTPEELNQLRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+ +VEGDLRR V +NIKRL+D+G YRGLRH RGLPVRGQ+T TNARTRK   KG VA 
Sbjct: 61  EQNIKVEGDLRREVQLNIKRLVDIGTYRGLRHVRGLPVRGQQTKTNARTRKGRRKGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|189424434|ref|YP_001951611.1| ribosomal protein S13 [Geobacter lovleyi SZ]
 gi|226712742|sp|B3E854|RS13_GEOLS RecName: Full=30S ribosomal protein S13
 gi|189420693|gb|ACD95091.1| ribosomal protein S13 [Geobacter lovleyi SZ]
          Length = 122

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 88/111 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  ++++I    +I    R  +L E+E+ ++R+ I
Sbjct: 1   MARIAGIDLPKNKRIEIALTYIYGIGRTTAKNILVATSIDGSTRTDKLTEAEIGKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 61  DKNVKVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRK 111


>gi|254455733|ref|ZP_05069162.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082735|gb|EDZ60161.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211]
          Length = 127

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP+ K V   L YI+GIG K S  IC+ L IP  +R+++L + E+++IR+ I
Sbjct: 1   MARIAGINIPQNKLVHIGLTYIYGIGDKFSNQICSSLEIPRAKRINELTDDEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+++VEGDLRR  +++IKRL+DL CYRG RHR+ LPVRGQRT  NARTRK
Sbjct: 61  DQNFKVEGDLRRDYSLSIKRLIDLACYRGTRHRKKLPVRGQRTRCNARTRK 111


>gi|223038487|ref|ZP_03608781.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267]
 gi|255321749|ref|ZP_05362904.1| 30S ribosomal protein S13 [Campylobacter showae RM3277]
 gi|222880344|gb|EEF15431.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267]
 gi|255301229|gb|EET80491.1| 30S ribosomal protein S13 [Campylobacter showae RM3277]
          Length = 122

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG   S+ I +   I  ++RV+ L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLHKSRQILDATKISYDKRVNDLTEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++++ VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QENHVVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|167755936|ref|ZP_02428063.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402]
 gi|237733253|ref|ZP_04563734.1| 30S ribosomal protein S13 [Mollicutes bacterium D7]
 gi|167703928|gb|EDS18507.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402]
 gi|229383634|gb|EEO33725.1| 30S ribosomal protein S13 [Coprobacillus sp. D7]
          Length = 121

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q+I  K+ I    RV  L E E+  IR+ I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILKKVGINENTRVKDLTEDEIGTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110


>gi|83591250|ref|YP_431259.1| 30S ribosomal protein S13 [Moorella thermoacetica ATCC 39073]
 gi|123523769|sp|Q2RFS3|RS13_MOOTA RecName: Full=30S ribosomal protein S13
 gi|83574164|gb|ABC20716.1| SSU ribosomal protein S13P [Moorella thermoacetica ATCC 39073]
          Length = 123

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S  I     + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYIYGIGRPKSNMILAATGVNPDTRVRDLTEDEVNRLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++  VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKNVVVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|255283708|ref|ZP_05348263.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469]
 gi|255265773|gb|EET58978.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469]
          Length = 122

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +IR  +
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRTSSNKILEAAGVNPDTRVRDLTDEEVSKIRDVM 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DEHYTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|269925856|ref|YP_003322479.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789516|gb|ACZ41657.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798]
          Length = 124

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 87/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  SS+ I  K  + P+ RV  L E EV +IR  I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYIYGIGPTSSKKILEKTGVNPDTRVKDLTEDEVARIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR VA NI+RL+++GCYRG+RHRR LPV GQRT TNAR R+   K   AR
Sbjct: 61  EHEYVVEGDLRREVAQNIRRLIEIGCYRGIRHRRNLPVHGQRTRTNARQRRGPRKTVGAR 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|319938483|ref|ZP_08012877.1| 30S ribosomal protein [Coprobacillus sp. 29_1]
 gi|319806399|gb|EFW03066.1| 30S ribosomal protein [Coprobacillus sp. 29_1]
          Length = 121

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ IC    I  + RV  L E E  +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGATTAKKICEATGISEDTRVKDLTEEEEGKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ ++VEGDLRR  A+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  EK-FKVEGDLRRDTALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110


>gi|241889158|ref|ZP_04776462.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379]
 gi|241864407|gb|EER68785.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379]
          Length = 121

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L E ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTEDQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110


>gi|291533604|emb|CBL06717.1| SSU ribosomal protein S13P [Megamonas hypermegale ART12/1]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG K+SQDI     I P+ R   L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGLKTSQDILAATGINPDTRARDLTEDEVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++++ VEGDLRR +++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK
Sbjct: 61  DKNHLVEGDLRREISLNIKRLVEIGCYRGRRHRLGLPVRGQNTKNNARTRK 111


>gi|331091642|ref|ZP_08340476.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403399|gb|EGG82958.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+ +I  K  + P+ R   L + EV  I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRVSANNILEKAGVNPDTRCRDLTDEEVKVISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++YQVEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DENYQVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|302390982|ref|YP_003826802.1| 30S ribosomal protein S13P [Acetohalobium arabaticum DSM 5501]
 gi|302203059|gb|ADL11737.1| SSU ribosomal protein S13P [Acetohalobium arabaticum DSM 5501]
          Length = 123

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++QDI  +  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIEGVDLPRDKRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTRVRDLTEEEVAKLRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEG+LRR +  +IKRL D+GCYRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  DEEYTVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQRTRTNARTRK 111


>gi|218779739|ref|YP_002431057.1| 30S ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01]
 gi|226712729|sp|B8FER2|RS13_DESAA RecName: Full=30S ribosomal protein S13
 gi|218761123|gb|ACL03589.1| ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01]
          Length = 127

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI GIG  +S  I  +L I P+ +   L E +V  IR+ I
Sbjct: 1   MARIAGVDLPKRKRIEIGLTYIFGIGRSTSSKILEELGIDPDTKTDDLTEGQVNDIRKLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEG+LR  ++MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DSKYRVEGELRTQISMNIKRLMDLGCYRGLRHRRGLPVHGQRTSTNARTRK 111


>gi|268609567|ref|ZP_06143294.1| 30S ribosomal protein S13 [Ruminococcus flavefaciens FD-1]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG +++ +I     + P+ RV  L E +V ++R  I
Sbjct: 1   MARIAGVDLPKNKRIEIGLTYIYGIGRQTATNILANTGVNPDTRVKDLAEEDVAKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DANYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111


>gi|304310037|ref|YP_003809635.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1]
 gi|301795770|emb|CBL43969.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1]
          Length = 118

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC+ + I PE ++  L E+++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAQSICSAVGIDPEVKIKDLAEAKLDEVRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y  EGDLRR ++M+IKRL DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YTTEGDLRREISMSIKRLTDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|121534657|ref|ZP_01666478.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1]
 gi|121306677|gb|EAX47598.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I     I P+ RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTLSREILAATKINPDTRVRDLTEEEISKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR   +NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  DKNYKVEGDLRREEQLNIKRLIEIGCYRGKRHRAGLPVRGQRTKTNARTRK 111


>gi|220928233|ref|YP_002505142.1| 30S ribosomal protein S13 [Clostridium cellulolyticum H10]
 gi|254811141|sp|B8I805|RS13_CLOCE RecName: Full=30S ribosomal protein S13
 gi|219998561|gb|ACL75162.1| ribosomal protein S13 [Clostridium cellulolyticum H10]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  + P+ RV  L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIYGIGRPKANEILVKTGVNPDTRVRDLTDDEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR +A+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRREIALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111


>gi|114319641|ref|YP_741324.1| 30S ribosomal protein S13 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312437|sp|Q0ABF3|RS13_ALHEH RecName: Full=30S ribosomal protein S13
 gi|114226035|gb|ABI55834.1| SSU ribosomal protein S13P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 119

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G   ++ IC++  +P +R+V +L E E+  IR A+
Sbjct: 1   MARIAGVNIPVHKHAWVALTSIYGVGRTRAKAICDEAGVPRDRKVKELTEQELEAIRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR VAM+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-YEVEGDLRRAVAMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRK 110


>gi|157737263|ref|YP_001489946.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
 gi|315636980|ref|ZP_07892204.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
 gi|166991598|sp|A8ETK3|RS13_ARCB4 RecName: Full=30S ribosomal protein S13
 gi|157699117|gb|ABV67277.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
 gi|315478810|gb|EFU69519.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
          Length = 122

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG  +S+ I N + I   +R  +L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRMEYALTYIYGIGLHNSRLILNAVGIDFNKRAFELTEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK
Sbjct: 61  QENYMVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 111


>gi|182418811|ref|ZP_02950076.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521]
 gi|237666810|ref|ZP_04526795.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377308|gb|EDT74869.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521]
 gi|237658009|gb|EEP55564.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 122

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+G+G  +SQ I     I P+ R+  L E EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGVGLSTSQKILATTGINPDTRIKDLSEEEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  NKNLIVEGDLRRDVALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|291544482|emb|CBL17591.1| SSU ribosomal protein S13P [Ruminococcus sp. 18P13]
          Length = 122

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  ++  I  +  + P+ RV  L ES+V  +R  I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIYGIGRNTAATILKETGVNPDTRVKDLTESDVALLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DKHYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111


>gi|220935470|ref|YP_002514369.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254811174|sp|B8GV36|RS13_THISH RecName: Full=30S ribosomal protein S13
 gi|219996780|gb|ACL73382.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 118

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP  K  V AL  I+GIG   +Q IC    + P+ ++  L E EV ++R A+
Sbjct: 1   MARVAGVNIPDNKHTVIALTAIYGIGRTRAQKICEATGVKPDMKIRDLTEEEVEKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GQ-FPVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|169350819|ref|ZP_02867757.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552]
 gi|169292405|gb|EDS74538.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552]
          Length = 121

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q+I  K+ I    RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILAKVGINENTRVKDLTEDEIGKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110


>gi|307694126|ref|ZP_07636363.1| 30S ribosomal protein S13 [Ruminococcaceae bacterium D16]
          Length = 122

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG  S+  I  K  I P+ RV  L E +  ++R+ I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRTSANKILAKAGINPDTRVKDLTEDDEAKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR VAM+IKRL ++GCYRG+RHR+GLPVRGQR+ TNARTRK
Sbjct: 61  SHEYTVEGDLRRNVAMDIKRLTEIGCYRGIRHRKGLPVRGQRSKTNARTRK 111


>gi|297569398|ref|YP_003690742.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925313|gb|ADH86123.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2]
          Length = 122

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ K +  AL YI+GIG  S++ I +   +P +R   +L ++EV ++R+ I
Sbjct: 1   MARIAGVDIPKNKHMEVALTYIYGIGRPSARRILDLAKLPYDRNSDELTDNEVAEVRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY VEGD RR V M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   +  V  
Sbjct: 61  EEDYVVEGDRRREVGMDIKRLMDLGCYRGLRHRKGLPCRGQRTSTNARTRKGPRRAAVKT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|167771242|ref|ZP_02443295.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM
           17241]
 gi|167666493|gb|EDS10623.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM
           17241]
          Length = 122

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI GIG K++Q I     + P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPKDKRVEIGLTYIFGIGRKTAQQILEATGVNPDTRVKDLTEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +  VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DHNVHVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRK 111


>gi|94266331|ref|ZP_01290033.1| Ribosomal protein S13 [delta proteobacterium MLMS-1]
 gi|93453085|gb|EAT03564.1| Ribosomal protein S13 [delta proteobacterium MLMS-1]
          Length = 122

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP+ K +  AL YIHGIG  S++ I +   +P  R   +L + E+ +IR+ +
Sbjct: 1   MARLAGVDIPKNKHMEVALTYIHGIGRSSARRILDLAGLPYNRNSDELADGEIAEIRKIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGD RR V M+IKRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK   +  V  
Sbjct: 61  EEQFVVEGDRRREVGMDIKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAAVKS 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|320352936|ref|YP_004194275.1| 30S ribosomal protein S13P [Desulfobulbus propionicus DSM 2032]
 gi|320121438|gb|ADW16984.1| SSU ribosomal protein S13P [Desulfobulbus propionicus DSM 2032]
          Length = 122

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K + RAL YI+GIG  S++ I +K  +P +     L   +V +IR  I
Sbjct: 1   MARIAGVDLPRNKHMDRALTYIYGIGLTSARQILDKADLPYQMNSDDLSADDVNRIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y VEGD RR V+M+IKRLMDLGCYRG RHRR LPVRGQRT TNARTRK   +G   R
Sbjct: 61  ENSYVVEGDRRREVSMDIKRLMDLGCYRGRRHRRSLPVRGQRTKTNARTRKGPRRGAAVR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257459217|ref|ZP_05624336.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268]
 gi|257443602|gb|EEV18726.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268]
          Length = 122

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +   I  ++RV  L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDAAGISYDKRVADLSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QEHYMVEGDLRKQVAMDIKALMDLGGYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|312144223|ref|YP_003995669.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus']
 gi|311904874|gb|ADQ15315.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus']
          Length = 128

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  +SQ+I    +I P+ RV  L E+E+  +R+ I
Sbjct: 1   MARIEGVDLPRNKRVEIGLTYIYGIGKTTSQNILENTSIDPDTRVKDLTEAEISSLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEG+LRR    +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|291296966|ref|YP_003508364.1| 30S ribosomal protein S13 [Meiothermus ruber DSM 1279]
 gi|290471925|gb|ADD29344.1| ribosomal protein S13 [Meiothermus ruber DSM 1279]
          Length = 126

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IPR KRV  AL YI+G+G   +++      + P  RV  L E+EV ++R+ +
Sbjct: 1   MARISGVEIPRNKRVDVALTYIYGVGPARAKEALAATNVDPATRVKDLTEAEVARLREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTYKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|150015069|ref|YP_001307323.1| 30S ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052]
 gi|189040496|sp|A6LPT7|RS13_CLOB8 RecName: Full=30S ribosomal protein S13
 gi|149901534|gb|ABR32367.1| ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052]
          Length = 122

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KRV   L YI+GIG  +SQ I     I P+ RV  L E EV +IR  I
Sbjct: 1   MARISGIDLPREKRVEIGLTYIYGIGLSTSQKILAVTGINPDTRVKDLSEEEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|116327248|ref|YP_796968.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116327288|ref|YP_797008.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332098|ref|YP_801816.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280172|sp|Q04PW2|RS13_LEPBJ RecName: Full=30S ribosomal protein S13
 gi|122284905|sp|Q055C0|RS13_LEPBL RecName: Full=30S ribosomal protein S13
 gi|116119992|gb|ABJ78035.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120032|gb|ABJ78075.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125787|gb|ABJ77058.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 125

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+A+
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSRVILKKAGIDESIRVKDLNESQEAAIRKAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK  GK  VA 
Sbjct: 61  EESAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKG-GKKTVAN 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|86606121|ref|YP_474884.1| 30S ribosomal protein S13 [Synechococcus sp. JA-3-3Ab]
 gi|123506458|sp|Q2JUJ3|RS13_SYNJA RecName: Full=30S ribosomal protein S13
 gi|86554663|gb|ABC99621.1| ribosomal protein S13 [Synechococcus sp. JA-3-3Ab]
          Length = 127

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   S+ I  K  I P+ R   L ++EV  +R  +
Sbjct: 1   MARIAGVDIPRDKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR  LPVRGQRT TNARTRK
Sbjct: 61  EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLNLPVRGQRTRTNARTRK 111


>gi|323141379|ref|ZP_08076270.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067]
 gi|322414128|gb|EFY04956.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067]
          Length = 122

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI+GIG   S++I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARISGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEEEVAKIRETL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +QDY+VEGDLRR  ++NIKRL+++G YRG RHR GLPVRGQ T  NARTRK
Sbjct: 61  DQDYKVEGDLRREESLNIKRLIEIGSYRGRRHRMGLPVRGQNTKNNARTRK 111


>gi|302336356|ref|YP_003801563.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084]
 gi|301320196|gb|ADK68683.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084]
          Length = 123

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG  S+  +C +  + P+ RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPREKRVEVGLTYLYGIGQTSATKVCAETGVNPDTRVKDLTEDEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + ++  EGDLRR V  N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK
Sbjct: 61  DANFTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111


>gi|329770016|ref|ZP_08261411.1| 30S ribosomal protein S13 [Gemella sanguinis M325]
 gi|328837327|gb|EGF86957.1| 30S ribosomal protein S13 [Gemella sanguinis M325]
          Length = 121

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L   ++ +IR+A+
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110


>gi|118443662|ref|YP_877224.1| 30S ribosomal protein S13 [Clostridium novyi NT]
 gi|158706223|sp|A0PXX2|RS13_CLONN RecName: Full=30S ribosomal protein S13
 gi|118134118|gb|ABK61162.1| ribosomal protein S13p/S18e [Clostridium novyi NT]
          Length = 123

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S++I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|261409495|ref|YP_003245736.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
 gi|315649673|ref|ZP_07902757.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
 gi|261285958|gb|ACX67929.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
 gi|315274861|gb|EFU38237.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
          Length = 122

 Score =  137 bits (345), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ +  +  I  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKVLKETGINADTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DGMVKVEGDLRREISLNIKRLTEIGCYRGIRHRRGLPVRGQRTKTNARTRK 111


>gi|237753000|ref|ZP_04583480.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430]
 gi|229375267|gb|EEO25358.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430]
          Length = 122

 Score =  137 bits (345), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+G+G K+S+DI N + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGVGLKTSRDILNAVKISYDKRVQDLSEDEVSSIAKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|297567259|ref|YP_003686231.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946]
 gi|296851708|gb|ADH64723.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946]
          Length = 126

 Score =  137 bits (345), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI G+G+  +++      + P  RV  L E+EV ++R+ I
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIFGVGWSRAKEALAATNVDPATRVKDLSEAEVARLREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y++EG+LR  +A NIKRLMD+GCYRGLRHRRGLPVRGQRT TNAR+RK
Sbjct: 61  ENTYKLEGELRAEIAGNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARSRK 111


>gi|78357277|ref|YP_388726.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|91207701|sp|Q30Z65|RS13_DESDG RecName: Full=30S ribosomal protein S13
 gi|78219682|gb|ABB39031.1| SSU ribosomal protein S13P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 122

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+G+G  ++ +I +   +   R +  L   EV +IR+ I
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGVGRATALEILDTTGVDWTRNIDDLSADEVNEIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+++VEGDLRR ++ NIKRLMD+GC+RGLRHRRGLP RGQRT TNARTRK
Sbjct: 61  EQNHKVEGDLRREISSNIKRLMDIGCHRGLRHRRGLPARGQRTKTNARTRK 111


>gi|210611151|ref|ZP_03288765.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787]
 gi|210152138|gb|EEA83145.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787]
          Length = 178

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ R   L + EV QI   I
Sbjct: 57  MARIAGVDLPRDKRVEIGLTYIYGIGRVSATKILEAAGVNPDTRCRDLTDEEVKQISAVI 116

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ YQVEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 117 DESYQVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 167


>gi|295111401|emb|CBL28151.1| SSU ribosomal protein S13P [Synergistetes bacterium SGP1]
          Length = 125

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI GIG  S++ I     + P+ RV  L E +  ++R+ I
Sbjct: 1   MARISGVDLPREKRIEIALTYIFGIGVPSARKILAATGVNPDVRVKDLSEDDAQKLRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y VEGDLRR V+M+IKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK
Sbjct: 61  EEHYVVEGDLRREVSMSIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRK 111


>gi|168187788|ref|ZP_02622423.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund]
 gi|169294364|gb|EDS76497.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund]
          Length = 123

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S++I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  GKSFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|220930990|ref|YP_002507898.1| ribosomal protein S13 [Halothermothrix orenii H 168]
 gi|254811150|sp|B8D0T4|RS13_HALOH RecName: Full=30S ribosomal protein S13
 gi|219992300|gb|ACL68903.1| ribosomal protein S13 [Halothermothrix orenii H 168]
          Length = 122

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRNKRVEIGLTYIYGIGRSTSNKILKVTGIDPDTRVKDLTEAEIAKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ YQVEGDLRR +  NIKRLMD+GCYRG+RHR+ LPVRGQRT TNARTRK
Sbjct: 61  DK-YQVEGDLRREIRANIKRLMDIGCYRGIRHRKNLPVRGQRTRTNARTRK 110


>gi|121997627|ref|YP_001002414.1| 30S ribosomal protein S13 [Halorhodospira halophila SL1]
 gi|158706237|sp|A1WVA0|RS13_HALHL RecName: Full=30S ribosomal protein S13
 gi|121589032|gb|ABM61612.1| SSU ribosomal protein S13P [Halorhodospira halophila SL1]
          Length = 119

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K    AL  I+GIG   +  ICN   +P +RRV  L ++EV  +RQ +
Sbjct: 1   MARIAGINIPTHKHAWVALTSIYGIGRTRALSICNAAGVPHDRRVRDLNDAEVEALRQEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y +EGDLRR+VAM+IKRLMDLGCYRG+RHRRGLPVRGQ+T TNARTRK   +G  +R
Sbjct: 61  -GNYVIEGDLRRSVAMDIKRLMDLGCYRGMRHRRGLPVRGQQTQTNARTRKGPRRGPASR 119


>gi|124514419|gb|EAY55932.1| ribosomal protein S13 [Leptospirillum rubarum]
          Length = 124

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KRV  AL YI+GIG  +S  I     I P RRV  L + EV  +R+ I
Sbjct: 1   MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEVASLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+ Y VEGDLRR V  NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR
Sbjct: 61  EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110


>gi|217967393|ref|YP_002352899.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
 gi|226712734|sp|B8E1F7|RS13_DICTD RecName: Full=30S ribosomal protein S13
 gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
          Length = 124

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V  AL YI+GIG  +S+ I     + P +RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPSNKKVEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT  NARTRK
Sbjct: 61  ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRK 111


>gi|225850760|ref|YP_002730994.1| 30S ribosomal protein S13 [Persephonella marina EX-H1]
 gi|225644837|gb|ACO03023.1| 30S ribosomal protein S13 [Persephonella marina EX-H1]
          Length = 116

 Score =  136 bits (343), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y+VEGDLRR VA+NIKRLMD+GCYRG+RHR GLPVRGQRT TNA+TR+
Sbjct: 61  EQNYKVEGDLRREVAVNIKRLMDMGCYRGIRHRLGLPVRGQRTKTNAKTRR 111


>gi|254495734|ref|ZP_05108649.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12]
 gi|254355047|gb|EET13667.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12]
          Length = 118

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV AL  I+GIG  +S  +C+ + I P  +V QL ++++   R  I
Sbjct: 1   MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCSTVGIDPSTKVSQLTDAQLEAFRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +   VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   KG
Sbjct: 61  AK-ITVEGDLRRVITMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKG 115


>gi|253682110|ref|ZP_04862907.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873]
 gi|331268439|ref|YP_004394931.1| 30S ribosomal protein S13 [Clostridium botulinum BKT015925]
 gi|253561822|gb|EES91274.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873]
 gi|329124989|gb|AEB74934.1| ribosomal protein S13 [Clostridium botulinum BKT015925]
          Length = 123

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S+ I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSRQILKETGVNPDTRVKDLSEEEVNTIRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|282857338|ref|ZP_06266575.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455]
 gi|282584838|gb|EFB90169.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455]
          Length = 126

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  ++++I  K  + P+ RV  L E E   +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSTAREILKKTGVNPDTRVKDLTEEEAQLLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++VEGDLRR V+MNIKRLMD+GCYRG+RHR GLP RGQRT TNART K
Sbjct: 61  VNNHKVEGDLRREVSMNIKRLMDIGCYRGIRHRLGLPCRGQRTKTNARTWK 111


>gi|257792537|ref|YP_003183143.1| 30S ribosomal protein S13 [Eggerthella lenta DSM 2243]
 gi|317490403|ref|ZP_07948887.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA]
 gi|325833513|ref|ZP_08165962.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1]
 gi|257476434|gb|ACV56754.1| ribosomal protein S13 [Eggerthella lenta DSM 2243]
 gi|316910538|gb|EFV32163.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA]
 gi|325485437|gb|EGC87906.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1]
          Length = 122

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+   L YI+GIG  +S+ I  +  + P  RV  L E ++ ++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVGLTYIYGIGLTTSKKILAETGVDPSVRVKDLTEDDLTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + +VEGDL R V+ N+KRLM++GCYRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  QANIKVEGDLHREVSQNVKRLMEIGCYRGLRHRRGLPVRGQRTHTNARTRK 111


>gi|227499171|ref|ZP_03929306.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21]
 gi|226904618|gb|EEH90536.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21]
          Length = 121

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRDKRVEYALPYIYGIGLTLSREILEKTGINPDTRVRDLTEAEIAKLRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR  ++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK
Sbjct: 61  DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRK 111


>gi|291298739|ref|YP_003510017.1| 30S ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728]
 gi|290567959|gb|ADD40924.1| ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728]
          Length = 126

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S + C    I P +RVH+L ++E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRSVETCAATGIDPSKRVHELTDAELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +YQVEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  EGNYQVEGDLRREVAADIRRKVEIGCYQGIRHRRGLPVHGQRTRTNARTRK 111


>gi|24213462|ref|NP_710943.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658679|ref|YP_002765.1| 30S ribosomal protein S13 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|26454666|sp|Q9XD12|RS13_LEPIN RecName: Full=30S ribosomal protein S13
 gi|73917913|sp|Q72NI5|RS13_LEPIC RecName: Full=30S ribosomal protein S13
 gi|24194234|gb|AAN47961.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601923|gb|AAS71402.1| 30S ribosomal protein S13 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 125

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+ +
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK  GK  VA 
Sbjct: 61  EETAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKG-GKKTVAN 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|206602700|gb|EDZ39181.1| Ribosomal protein S13 [Leptospirillum sp. Group II '5-way CG']
          Length = 124

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KRV  AL YI+GIG  +S  I     I P RRV  L + E+  +R+ I
Sbjct: 1   MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEIASLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+ Y VEGDLRR V  NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR
Sbjct: 61  EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110


>gi|303240947|ref|ZP_07327458.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2]
 gi|302591533|gb|EFL61270.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2]
          Length = 123

 Score =  136 bits (342), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S  I  K  + P+ RV  L + E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRTLSNQILEKTGVNPDTRVRDLTDDEISKLRECI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR V++NIKRLM++GCYRG RHR GLP RGQRT TNARTRK
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLMEVGCYRGRRHRMGLPCRGQRTKTNARTRK 111


>gi|226309833|ref|YP_002769727.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599]
 gi|254811132|sp|C0ZIK5|RS13_BREBN RecName: Full=30S ribosomal protein S13
 gi|226092781|dbj|BAH41223.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599]
          Length = 122

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I +   +    RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVALTYIFGIGRPTSQKILSATGVDMNTRVRDLTEDEVNKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRLM++GC+RG+RHRRGLPVRGQR+ TNARTRK
Sbjct: 61  DKTVKVEGDLRREISLNIKRLMEIGCFRGIRHRRGLPVRGQRSKTNARTRK 111


>gi|255659526|ref|ZP_05404935.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544]
 gi|260848079|gb|EEX68086.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544]
          Length = 123

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG K+SQ++     I P+ R   L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLKTSQELLKMTGINPDTRTRDLTEDEVVKLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR   MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNVVVEGDLRRERQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|187930341|ref|YP_001900828.1| 30S ribosomal protein S13 [Ralstonia pickettii 12J]
 gi|241664509|ref|YP_002982869.1| 30S ribosomal protein S13 [Ralstonia pickettii 12D]
 gi|309782857|ref|ZP_07677577.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA]
 gi|226712780|sp|B2UEJ6|RS13_RALPJ RecName: Full=30S ribosomal protein S13
 gi|187727231|gb|ACD28396.1| ribosomal protein S13 [Ralstonia pickettii 12J]
 gi|240866536|gb|ACS64197.1| ribosomal protein S13 [Ralstonia pickettii 12D]
 gi|308918281|gb|EFP63958.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA]
          Length = 121

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    IP +++V  L + +   +R+ I
Sbjct: 1   MARIAGVNIPNHKHTVIGLTAIYGIGRSRAQKICEATGIPTDKKVKDLTDPDQDALRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|224417908|ref|ZP_03655914.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|242309342|ref|ZP_04808497.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489]
 gi|253827247|ref|ZP_04870132.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|313141449|ref|ZP_07803642.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|239523913|gb|EEQ63779.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489]
 gi|253510653|gb|EES89312.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|313130480|gb|EFR48097.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
          Length = 122

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG K+S+DI N + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKASRDILNAVNISYDKRVQDLGEDEVSAIAKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRK 111


>gi|331004146|ref|ZP_08327626.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411556|gb|EGG90966.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 122

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS+ I  +  + P+ RV  L + EV ++ Q I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTSSKRILKEAGVNPDTRVKDLTDDEVKELAQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  SDSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRK 111


>gi|157964784|ref|YP_001499608.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5]
 gi|166991602|sp|A8F2C5|RS13_RICM5 RecName: Full=30S ribosomal protein S13
 gi|157844560|gb|ABV85061.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5]
          Length = 125

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP +KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDSKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|206900392|ref|YP_002250725.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
 gi|226712733|sp|B5YDW7|RS13_DICT6 RecName: Full=30S ribosomal protein S13
 gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
          Length = 124

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  +S+ I     + P +RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPSNKKIEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT  NARTRK
Sbjct: 61  ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRK 111


>gi|291542056|emb|CBL15166.1| SSU ribosomal protein S13P [Ruminococcus bromii L2-63]
          Length = 122

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG K++ DI     + P+ RV  L E ++ ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRKTADDIIAATGVNPDTRVRDLTEEDIAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR +A +IKRL+D+GCYRG+RHR+GLPVRGQR+ TNARTRK
Sbjct: 61  EHHCRVEGDLRRDIAYDIKRLIDIGCYRGVRHRKGLPVRGQRSKTNARTRK 111


>gi|319944773|ref|ZP_08019037.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599]
 gi|319742022|gb|EFV94445.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599]
          Length = 121

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   +Q IC  + I P ++V  L ++E+ +IR  +
Sbjct: 1   MARIAGVNVPDRQHTVIGLTAIYGIGRARAQAICAAVGIEPSKKVRDLSDAEMERIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K GVA 
Sbjct: 61  GR-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|256826597|ref|YP_003150556.1| 30S ribosomal protein S13P [Cryptobacterium curtum DSM 15641]
 gi|256582740|gb|ACU93874.1| SSU ribosomal protein S13P [Cryptobacterium curtum DSM 15641]
          Length = 122

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+   L YI+GIG  +SQ I  +  + P+ RV  + E ++ +IR  +
Sbjct: 1   MARLVGVDLPRDKRIEVGLTYIYGIGLTTSQKILAETGVDPDTRVRDITEEDLTKIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDL R V+ N+KRLM++GCYRGLRHR+GLPV GQRTHTNARTRK
Sbjct: 61  NENLSVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111


>gi|52840596|ref|YP_094395.1| 30S ribosomal protein S13 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54293343|ref|YP_125758.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens]
 gi|54296387|ref|YP_122756.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris]
 gi|148361033|ref|YP_001252240.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby]
 gi|296105899|ref|YP_003617599.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99
           Alcoy]
 gi|81369315|sp|Q5WZJ0|RS13_LEGPL RecName: Full=30S ribosomal protein S13
 gi|81371222|sp|Q5X837|RS13_LEGPA RecName: Full=30S ribosomal protein S13
 gi|81378213|sp|Q5ZYM1|RS13_LEGPH RecName: Full=30S ribosomal protein S13
 gi|158706243|sp|A5IHP4|RS13_LEGPC RecName: Full=30S ribosomal protein S13
 gi|52627707|gb|AAU26448.1| 30S ribosomal protein S13 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750172|emb|CAH11564.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris]
 gi|53753175|emb|CAH14622.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens]
 gi|148282806|gb|ABQ56894.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby]
 gi|295647800|gb|ADG23647.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609159|emb|CBW98615.1| 30S ribosomal protein S13 [Legionella pneumophila 130b]
          Length = 118

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/116 (62%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV AL  I+GIG  +S  +C  + I P  +V QL ++++  +R  I
Sbjct: 1   MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCKTVDIDPSVKVSQLSDAQLESLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +   VEGDLRR V MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   KG
Sbjct: 61  AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKG 115


>gi|5163228|gb|AAD40607.1|AF115283_26 ribosomal protein S13 [Leptospira interrogans]
          Length = 125

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+ +
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTR K GK  VA 
Sbjct: 61  EETAKVEGDLRSEIRLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTR-KGGKKTVAN 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|237747387|ref|ZP_04577867.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS]
 gi|229378738|gb|EEO28829.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS]
          Length = 121

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +V  L  I+GIG   ++DIC    + P ++V  L +SE+ ++R+ I
Sbjct: 1   MARIAGVNIPNHQHIVIGLTAIYGIGRPRAEDICAATGVAPTKKVKDLDDSELEKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|257784938|ref|YP_003180155.1| 30S ribosomal protein S13 [Atopobium parvulum DSM 20469]
 gi|257473445|gb|ACV51564.1| ribosomal protein S13 [Atopobium parvulum DSM 20469]
          Length = 122

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG   +  +CN+  I    RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGIGQTRATKVCNETGIDVNTRVKDLTEEEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR V  N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK
Sbjct: 61  DANYTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111


>gi|88607193|ref|YP_504913.1| 30S ribosomal protein S13 [Anaplasma phagocytophilum HZ]
 gi|123495600|sp|Q2GL38|RS13_ANAPZ RecName: Full=30S ribosomal protein S13
 gi|88598256|gb|ABD43726.1| ribosomal protein S13 [Anaplasma phagocytophilum HZ]
          Length = 123

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/122 (59%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I    RV  L E +V++IR  I
Sbjct: 1   MARIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RAGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGSRLAVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15612281|ref|NP_223934.1| 30S ribosomal protein S13 [Helicobacter pylori J99]
 gi|7388139|sp|Q9ZJT2|RS13_HELPJ RecName: Full=30S ribosomal protein S13
 gi|4155844|gb|AAD06818.1| 30S RIBOSOMAL PROTEIN S13 [Helicobacter pylori J99]
          Length = 120

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL   +GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTCKNGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRK 111


>gi|225026388|ref|ZP_03715580.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353]
 gi|224956277|gb|EEG37486.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353]
          Length = 122

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSADQILKAADVNPDTRVRDLTDDEVRRLSDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             DY VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  NADYTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|255526604|ref|ZP_05393511.1| ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|296187293|ref|ZP_06855689.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|255509712|gb|EET86045.1| ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|296048164|gb|EFG87602.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7]
          Length = 123

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S  I ++  + P+ RV  L E EV  +R  +
Sbjct: 1   MARIAGVDLPKEKRVEIGLTYIYGIGLPTSHKILSETGVNPDIRVKDLSEEEVNALRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  NKNVKVEGDLRREIALNIKRLIEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|157164203|ref|YP_001467698.1| 30S ribosomal protein S13 [Campylobacter concisus 13826]
 gi|166231905|sp|A7ZFZ0|RS13_CAMC1 RecName: Full=30S ribosomal protein S13
 gi|112800821|gb|EAT98165.1| ribosomal protein S13p/S18e [Campylobacter concisus 13826]
          Length = 122

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+   L YI+GIG   S+ I +   I  ++RV++L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVYELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QEHHVVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|71083783|ref|YP_266503.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763181|ref|ZP_01265145.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002]
 gi|91207713|sp|Q4FLN9|RS13_PELUB RecName: Full=30S ribosomal protein S13
 gi|71062896|gb|AAZ21899.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717594|gb|EAS84245.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002]
          Length = 127

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP+ K V   L YI+GIG K S  IC  L IP  +R+++L + ++++IR+ I
Sbjct: 1   MARIAGVNIPQNKLVHIGLTYIYGIGNKFSSQICTSLEIPKAKRINELTDEDILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +++VEGDLRR  ++ IKRL+DL CYRG RHR+ LPVRGQRT  NARTRK
Sbjct: 61  DANFKVEGDLRRDYSLTIKRLIDLACYRGSRHRKKLPVRGQRTRCNARTRK 111


>gi|303233092|ref|ZP_07319765.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4]
 gi|308233882|ref|ZP_07664619.1| SSU ribosomal protein S13P [Atopobium vaginae DSM 15829]
 gi|328943589|ref|ZP_08241054.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829]
 gi|302480677|gb|EFL43764.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4]
 gi|327491558|gb|EGF23332.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829]
          Length = 123

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++G+G   +  +C +  I P+ RV  L E EV ++R  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGVGQTRATKVCAETGINPDTRVKDLTEDEVTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + ++  EGDLRR V  N  RLM++GCYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DANFTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|317126887|ref|YP_004093169.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522]
 gi|315471835|gb|ADU28438.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522]
          Length = 121

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 88/111 (79%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  S++ I ++  +  E RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVYGIGTSSAKAILSEAGVSEETRVRDLTEDELGKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DK-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|284049233|ref|YP_003399572.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731]
 gi|283953454|gb|ADB48257.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731]
          Length = 121

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEAEIAKLREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR  ++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK   K   A+
Sbjct: 61  DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKKVAGAK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|302036690|ref|YP_003797012.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii]
 gi|300604754|emb|CBK41086.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii]
          Length = 129

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L Y++GIG  ++Q I  K  +    RV  + E ++++IR+ I
Sbjct: 1   MARIAGVDLPKDKRIDIGLTYVYGIGRVAAQVILKKAGVDGSIRVKDVSEDKIVKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+DY+VEGDLR+ V+MNIKRL+D G +RGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  ERDYRVEGDLRKEVSMNIKRLVDTGTFRGLRHRKGLPVRGQRTKTNARTRK 111


>gi|309777156|ref|ZP_07672119.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53]
 gi|313897276|ref|ZP_07830820.1| 30S ribosomal protein S13 [Clostridium sp. HGF2]
 gi|308915026|gb|EFP60803.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53]
 gi|312957997|gb|EFR39621.1| 30S ribosomal protein S13 [Clostridium sp. HGF2]
          Length = 121

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  +S+ I  K  I  + RV  L E +V  IR  I
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRSTSEKILAKTGISEDIRVKDLTEDQVNAIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  D-GVKVEGDLRREVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|256371240|ref|YP_003109064.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007824|gb|ACU53391.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 125

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ +     + P+ RV  L + EV+ +R  I
Sbjct: 1   MARIAGVDIPREKRVEVALTYIYGIGPTLARQVLEATGVNPDTRVRNLTDEEVLALRSWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+ +VEGDLRR V  NIKR + +GCY+G+RHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DQNLKVEGDLRREVDQNIKRKIQIGCYQGIRHRRGLPVRGQRTHTNARTRK 111


>gi|210623212|ref|ZP_03293651.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275]
 gi|210153749|gb|EEA84755.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275]
          Length = 149

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I P+ R+  L E EV ++R+ I
Sbjct: 27  MARIAGVDLPREKRAEIGLTYIYGIGKATSNEILAKAGINPDTRIKDLSEDEVNELRKII 86

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP RGQ+T TNARTRK
Sbjct: 87  DEDFLVEGDLRREIALNIKRLRDIKCYRGIRHMKGLPCRGQKTKTNARTRK 137


>gi|315925230|ref|ZP_07921444.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621464|gb|EFV01431.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 122

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S++I  +L I P  R   L E EV  +R  +
Sbjct: 1   MARIAGVDLPRNKRVEVGLTYIYGIGRSTSKEILAELKIDPNTRCKDLTEDEVNSLRNIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR V +NIKRL+++G YRG RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DEKYTVEGDLRREVNLNIKRLIEIGSYRGYRHRRGLPVRGQKTKTNARTRK 111


>gi|328951211|ref|YP_004368546.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884]
 gi|328451535|gb|AEB12436.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884]
          Length = 126

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   ++       I P  RV  L + EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVEIALTYIYGIGRTRAKQALEATGIDPSVRVKDLSDQEVVKLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTWKLEGELRAEVQANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRK 111


>gi|329768297|ref|ZP_08259798.1| 30S ribosomal protein S13 [Gemella haemolysans M341]
 gi|328837496|gb|EGF87125.1| 30S ribosomal protein S13 [Gemella haemolysans M341]
          Length = 121

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L   ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110


>gi|304405591|ref|ZP_07387250.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9]
 gi|304345630|gb|EFM11465.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9]
          Length = 122

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +++ I     +  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALQYIFGIGQTTAKKILATTGVDAQTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRK 111


>gi|257456914|ref|ZP_05622095.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580]
 gi|257445623|gb|EEV20685.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580]
          Length = 125

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P  K V  AL YI+GI   S++ IC K  I P R ++ L + E+  IR  I
Sbjct: 1   MARISGVDLPN-KHVNIALTYIYGISHSSAKAICEKSKIDPMRMINDLNQDELAAIRAVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +QDY+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTRK
Sbjct: 60  DQDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTRK 110


>gi|152988309|ref|YP_001346245.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7]
 gi|166231915|sp|A6UZL0|RS13_PSEA7 RecName: Full=30S ribosomal protein S13
 gi|150963467|gb|ABR85492.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7]
          Length = 118

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q+IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-HTTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|154498910|ref|ZP_02037288.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC
           29799]
 gi|150271750|gb|EDM98976.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC
           29799]
          Length = 122

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+   L YI+GIG  S+  I  +  I P+ RV  L E++   +R+ I
Sbjct: 1   MARIAGIDLPKDKRIEIGLTYIYGIGRTSANKILAETGINPDTRVKDLTEADEAALRECI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR VAM+IKRL ++GCYRGLRHR+GLPVRGQR+ TNARTRK
Sbjct: 61  AHNYTVEGDLRRDVAMDIKRLTEIGCYRGLRHRKGLPVRGQRSKTNARTRK 111


>gi|72163019|ref|YP_290676.1| 30S ribosomal protein S13 [Thermobifida fusca YX]
 gi|91207629|sp|Q47LL9|RS13_THEFY RecName: Full=30S ribosomal protein S13
 gi|71916751|gb|AAZ56653.1| SSU ribosomal protein S13P [Thermobifida fusca YX]
          Length = 126

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 86/110 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   + +      + P+ RV+QL E E++++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYVYGIGRSRAAETLANTGVNPDTRVYQLTEEELVKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  DANYKVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|328953133|ref|YP_004370467.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109]
 gi|328453457|gb|AEB09286.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109]
          Length = 124

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI+GIG  ++Q I     +    +   L ++E+ +IR  I
Sbjct: 1   MARISGVDLPRNKRMEIALTYIYGIGRTTAQKILQVAEVDGSTKSDNLTDAELTRIRNVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  ++VEGDLRR ++MNIKRLMD+GCYRGLRHR+ LPVRGQRTHTNARTRK
Sbjct: 61  DAHHKVEGDLRREISMNIKRLMDIGCYRGLRHRKSLPVRGQRTHTNARTRK 111


>gi|256390170|ref|YP_003111734.1| 30S ribosomal protein S13 [Catenulispora acidiphila DSM 44928]
 gi|256356396|gb|ACU69893.1| ribosomal protein S13 [Catenulispora acidiphila DSM 44928]
          Length = 126

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KR+  AL YI+GIG   SQ  C +  I P  RV  L E +++++RQ I
Sbjct: 1   MARLSGVDIPREKRLEIALTYIYGIGRTRSQKTCAETGINPNTRVKDLTEDDLVKLRQWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR V  +I+R +++GCY+G+RHR+GLPV GQRTHTNARTRK
Sbjct: 61  DTNYRVEGDLRREVQADIRRKIEIGCYQGVRHRKGLPVHGQRTHTNARTRK 111


>gi|315652329|ref|ZP_07905321.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986]
 gi|315485452|gb|EFU75842.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986]
          Length = 122

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS+ I  +  + P+ RV  L + EV ++ Q I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTSSRRILKEANVNPDTRVKDLTDDEVKELAQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  SDTQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRK 111


>gi|302337499|ref|YP_003802705.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
 gi|301634684|gb|ADK80111.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
          Length = 121

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 86/112 (76%), Gaps = 3/112 (2%)

Query: 1   MARIAGVNIP-RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MARIAG+++P +A ++  +L YI+GIG  S+ +IC K  I P+ +++ L   +V ++R  
Sbjct: 1   MARIAGIDLPNKATKI--SLTYIYGIGRSSAMEICKKAGIDPDSKMNDLSAEDVNKLRTL 58

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+ DY VEG LR  +A+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 59  IDSDYTVEGRLRTQIALNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|270157889|ref|ZP_06186546.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968]
 gi|289163852|ref|YP_003453990.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150]
 gi|269989914|gb|EEZ96168.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968]
 gi|288857025|emb|CBJ10839.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150]
          Length = 118

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +V AL  I+GIG  +S  +C+ + I P ++V +L ++++  +R  I
Sbjct: 1   MARIAGVNIPDHKHLVIALTAIYGIGKPTSIKLCSAVGIDPSKKVSELTDAQLESLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +   VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK   KG
Sbjct: 61  AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPVHGQRTKTNARTRKGRRKG 115


>gi|160914537|ref|ZP_02076752.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991]
 gi|158433695|gb|EDP11984.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991]
          Length = 121

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 87/111 (78%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  ++++I  K+ I  + RV  L E +V  IR+ +
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEEILAKVGISEDIRVKDLSEEQVNAIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DT-IKVEGDLRRDVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|23097598|ref|NP_691064.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831]
 gi|32363325|sp|Q8ETW0|RS13_OCEIH RecName: Full=30S ribosomal protein S13
 gi|22775821|dbj|BAC12099.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831]
          Length = 121

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+G+G  ++Q I  +  +  + RV  L E E+ +IRQA+
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGVGKTTAQQILKEAGVSEDTRVRDLTEDELGRIRQAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y  EGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  N+RTRK
Sbjct: 61  DQ-YNTEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNSRTRK 110


>gi|239948297|ref|ZP_04700050.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922573|gb|EER22597.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 125

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|292669834|ref|ZP_06603260.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541]
 gi|292648631|gb|EFF66603.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541]
          Length = 122

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  ++Q I     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEISLTYIYGIGLTTAQKILAIADVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222529705|ref|YP_002573587.1| 30S ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
 gi|302871523|ref|YP_003840159.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
 gi|312127251|ref|YP_003992125.1| 30S ribosomal protein s13 [Caldicellulosiruptor hydrothermalis 108]
 gi|312135471|ref|YP_004002809.1| 30S ribosomal protein s13 [Caldicellulosiruptor owensensis OL]
 gi|312622070|ref|YP_004023683.1| 30S ribosomal protein s13 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254811124|sp|B9MKF6|RS13_ANATD RecName: Full=30S ribosomal protein S13
 gi|222456552|gb|ACM60814.1| ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
 gi|302574382|gb|ADL42173.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
 gi|311775522|gb|ADQ05009.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL]
 gi|311777270|gb|ADQ06756.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108]
 gi|312202537|gb|ADQ45864.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 124

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|218284161|ref|ZP_03489955.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989]
 gi|218215354|gb|EEC88892.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989]
          Length = 121

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L YI+GIG  +S+ +  +  I  + RV  L E ++  IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYIYGIGLTTSKKVLEETGISEDVRVKDLTEEQLNAIRKTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DA-IKVEGDLRREVQLNIKRLMEIGCYRGMRHRKGLPVRGQRTKTNARTRK 110


>gi|67458692|ref|YP_246316.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2]
 gi|75536846|sp|Q4UMQ7|RS13_RICFE RecName: Full=30S ribosomal protein S13
 gi|67004225|gb|AAY61151.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2]
          Length = 125

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|157828838|ref|YP_001495080.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933565|ref|YP_001650354.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. Iowa]
 gi|166231921|sp|A8GT47|RS13_RICRS RecName: Full=30S ribosomal protein S13
 gi|189044290|sp|B0BUN8|RS13_RICRO RecName: Full=30S ribosomal protein S13
 gi|157801319|gb|ABV76572.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908652|gb|ABY72948.1| SSU ribosomal protein S13P [Rickettsia rickettsii str. Iowa]
          Length = 125

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KRVV +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|160881760|ref|YP_001560728.1| ribosomal protein S13 [Clostridium phytofermentans ISDg]
 gi|189040498|sp|A9KJG9|RS13_CLOPH RecName: Full=30S ribosomal protein S13
 gi|160430426|gb|ABX43989.1| ribosomal protein S13 [Clostridium phytofermentans ISDg]
          Length = 122

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG  SS  I  K  + P+ RV  L + EV +IR  I
Sbjct: 1   MARISGVDLPREKRIEIGLTYVYGIGRVSSNRILAKAGVNPDTRVRDLTDEEVAKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETMLVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|108804950|ref|YP_644887.1| 30S ribosomal protein S13 [Rubrobacter xylanophilus DSM 9941]
 gi|123177177|sp|Q1AU53|RS13_RUBXD RecName: Full=30S ribosomal protein S13
 gi|108766193|gb|ABG05075.1| SSU ribosomal protein S13P [Rubrobacter xylanophilus DSM 9941]
          Length = 122

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +++ +  +  + P+ RV  L E E+  +R+ I
Sbjct: 1   MARIAGVDLPREKRIEVALTYIYGIGRSTARRVIRETGVDPDTRVRDLAEGEIAALRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDL+R V  NI+RLMD+GCYRGLRHRRGLPVRGQRT TNAR RK
Sbjct: 61  DENLKVEGDLKREVNQNIRRLMDIGCYRGLRHRRGLPVRGQRTKTNARQRK 111


>gi|226227382|ref|YP_002761488.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27]
 gi|259494679|sp|C1A4J3|RS13_GEMAT RecName: Full=30S ribosomal protein S13
 gi|226090573|dbj|BAH39018.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27]
          Length = 125

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K+V   L YI GIG K++Q I     +   +RV  L ++++ ++RQ I
Sbjct: 1   MARIAGVDLPREKKVEIGLTYIFGIGRKTAQKILEASGVSSAQRVRDLNDNDLNKLRQEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++++VEG LR  VAMNIKRLMD+G YRG RHRRGLPVRGQRTHTNART+K
Sbjct: 61  ERNHRVEGALRTEVAMNIKRLMDIGSYRGTRHRRGLPVRGQRTHTNARTKK 111


>gi|94676656|ref|YP_588798.1| 30S ribosomal protein S13 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|158706338|sp|Q1LTB6|RS13_BAUCH RecName: Full=30S ribosomal protein S13
 gi|94219806|gb|ABF13965.1| ribosomal protein S13p [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 118

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG K SQ ICN   IP   ++  L E+++  +R  I
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGIKRSQYICNATGIPQNTKLSTLSETQIDTLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + +EGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  TQ-FTIEGDLRREVTLNIKRLIDLGTYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|300309479|ref|YP_003773571.1| 30S ribosomal protein S13 [Herbaspirillum seropedicae SmR1]
 gi|300072264|gb|ADJ61663.1| 30S ribosomal subunit S13 protein [Herbaspirillum seropedicae SmR1]
          Length = 121

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I+GIG   +QDIC    +P  ++V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIYGIGRPRAQDICAATGVPTNKKVKDLDDNELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRRELSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|160947675|ref|ZP_02094842.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270]
 gi|158446809|gb|EDP23804.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270]
          Length = 122

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG K+S DI     I P+ RV  L E+EV  IR  I
Sbjct: 1   MARIVGVDLPREKRVEIGLTYIYGIGRKTSNDILRNAGINPDTRVKDLTEAEVALIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR +AMNIKRL ++ CYRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YLVEGDLRREIAMNIKRLREINCYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|313895242|ref|ZP_07828799.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529820|ref|ZP_08030897.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399]
 gi|312976137|gb|EFR41595.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320137838|gb|EFW29743.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399]
          Length = 122

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +S+ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTTSKKLLAIADVNPDARTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254517496|ref|ZP_05129552.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA]
 gi|226911245|gb|EEH96446.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA]
          Length = 121

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  +S  I  +  + P+ RV  L E EV +IR+ +
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLSTSHKILAETGVNPDTRVRDLTEEEVTKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  -KTLTIEGDLRREVALNIKRLVEIGCYRGIRHRKGLPVRGQKTKTNARTRK 110


>gi|312793914|ref|YP_004026837.1| 30S ribosomal protein s13 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312877390|ref|ZP_07737355.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795864|gb|EFR12228.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312181054|gb|ADQ41224.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 124

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVARIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|154173907|ref|YP_001409134.1| 30S ribosomal protein S13 [Campylobacter curvus 525.92]
 gi|166231906|sp|A7H0Z2|RS13_CAMC5 RecName: Full=30S ribosomal protein S13
 gi|112802271|gb|EAT99615.1| ribosomal protein S13p/S18e [Campylobacter curvus 525.92]
          Length = 122

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+   L YI+GIG   S+ I +   I  ++RV +L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVFELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK
Sbjct: 61  QEHHIVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRK 111


>gi|126697666|ref|YP_001086563.1| 30S ribosomal protein S13 [Clostridium difficile 630]
 gi|254973757|ref|ZP_05270229.1| 30S ribosomal protein S13 [Clostridium difficile QCD-66c26]
 gi|255091147|ref|ZP_05320625.1| 30S ribosomal protein S13 [Clostridium difficile CIP 107932]
 gi|255099258|ref|ZP_05328235.1| 30S ribosomal protein S13 [Clostridium difficile QCD-63q42]
 gi|255305041|ref|ZP_05349213.1| 30S ribosomal protein S13 [Clostridium difficile ATCC 43255]
 gi|255312801|ref|ZP_05354384.1| 30S ribosomal protein S13 [Clostridium difficile QCD-76w55]
 gi|255515560|ref|ZP_05383236.1| 30S ribosomal protein S13 [Clostridium difficile QCD-97b34]
 gi|255648655|ref|ZP_05395557.1| 30S ribosomal protein S13 [Clostridium difficile QCD-37x79]
 gi|255654188|ref|ZP_05399597.1| 30S ribosomal protein S13 [Clostridium difficile QCD-23m63]
 gi|260681872|ref|YP_003213157.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
 gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
 gi|296449773|ref|ZP_06891542.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
 gi|296877837|ref|ZP_06901859.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
 gi|306518778|ref|ZP_07405125.1| 30S ribosomal protein S13 [Clostridium difficile QCD-32g58]
 gi|123174671|sp|Q18CI0|RS13_CLOD6 RecName: Full=30S ribosomal protein S13
 gi|115249103|emb|CAJ66914.1| 30S ribosomal protein S13 [Clostridium difficile]
 gi|260208035|emb|CBA60233.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
 gi|260211486|emb|CBE01623.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
 gi|296261371|gb|EFH08197.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
 gi|296431137|gb|EFH16962.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
          Length = 123

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  ++ +I  K  I P+ R+  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQRT TNARTRK
Sbjct: 61  DDDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTNARTRK 111


>gi|258646027|ref|ZP_05733496.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
 gi|260403399|gb|EEW96946.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
          Length = 125

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S++I NK  I P+ RV  L E +V  IR A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIFGIGLTLSREILNKAGISPDVRVRDLTEDDVANIRNAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             DY+VEGDLRR  ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK
Sbjct: 61  -ADYKVEGDLRREESLNIKRLVEIGSYRGRRHRDGLPTRGQRTKTNARTRK 110


>gi|17547715|ref|NP_521117.1| 30S ribosomal protein S13 [Ralstonia solanacearum GMI1000]
 gi|32363369|sp|Q8XV35|RS13_RALSO RecName: Full=30S ribosomal protein S13
 gi|17430020|emb|CAD16705.1| probable 30s ribosomal protein s13 [Ralstonia solanacearum GMI1000]
 gi|299065438|emb|CBJ36607.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CMR15]
          Length = 121

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   ++ IC    IP +++V  L + +   +R+ I
Sbjct: 1   MARIAGVNIPNHKHTVIGLTAIYGIGRSRARKICEATGIPTDKKVKDLTDPDQDALRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|169335654|ref|ZP_02862847.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258392|gb|EDS72358.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM
           17244]
          Length = 122

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S  +  +  I P+ R+  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRVEIGLTYIYGIGQATSNKLLAEAGINPDTRIKDLSEEEVNKLRSLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ++ TNARTRK
Sbjct: 61  DEKVTVEGDLRREVSLNIKRLMEIGTYRGLRHRRGLPVRGQKSKTNARTRK 111


>gi|289449373|ref|YP_003475758.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289183920|gb|ADC90345.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 122

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P  KR+  AL YI+GIG   S +I  K  + P+ RV  L + E+ +IR  +
Sbjct: 1   MARISGVDLPNEKRLEIALTYIYGIGRTLSGEIIAKCGLNPDTRVKDLSDDEIAKIRDVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR VA+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  ENQYKVEGDLRREVALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRK 111


>gi|146297260|ref|YP_001181031.1| 30S ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166231904|sp|A4XLQ5|RS13_CALS8 RecName: Full=30S ribosomal protein S13
 gi|145410836|gb|ABP67840.1| SSU ribosomal protein S13P [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 124

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRIEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|28212157|ref|NP_783101.1| 30S ribosomal protein S13 [Clostridium tetani E88]
 gi|32363299|sp|Q890Q7|RS13_CLOTE RecName: Full=30S ribosomal protein S13
 gi|28204601|gb|AAO37038.1| SSU ribosomal protein S13P [Clostridium tetani E88]
          Length = 123

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG  S++ I  +  + P+ R+  L E EV  +R  I
Sbjct: 1   MARIAGIDLPREKRVEVGLTYIFGIGTSSAKKILKETGVNPDIRIKDLSEEEVNLLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q+ +VEGDLRR VA++IKRL ++G YRG+RHRRGLPVRGQ+T TNARTRK   K  V+R
Sbjct: 61  NQNLKVEGDLRRDVALDIKRLKEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKLVVSR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|203284410|ref|YP_002222150.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
 gi|203287944|ref|YP_002222959.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
 gi|226712699|sp|B5RM58|RS13_BORDL RecName: Full=30S ribosomal protein S13
 gi|226712702|sp|B5RPK4|RS13_BORRA RecName: Full=30S ribosomal protein S13
 gi|201083853|gb|ACH93444.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
 gi|201085164|gb|ACH94738.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
          Length = 125

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  I PE+R   L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRSRALEICKKTGILPEKRAKDLDNEEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111


>gi|212637979|ref|YP_002314499.1| 30S ribosomal protein S13 [Anoxybacillus flavithermus WK1]
 gi|226712689|sp|B7GJ92|RS13_ANOFW RecName: Full=30S ribosomal protein S13
 gi|212559459|gb|ACJ32514.1| Ribosomal protein S13 [Anoxybacillus flavithermus WK1]
          Length = 121

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKATAQKILAEAGVSEDTRVRDLTEEELGKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|299143169|ref|ZP_07036249.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517654|gb|EFI41393.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 120

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG K SQ+I     +  + RV  L ESE+ +IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRKRSQEILTNADVNFDTRVKDLTESELARIRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR +AMNIKRL ++ CYRG+RH++GLPVRGQ+T TNARTRK
Sbjct: 61  DK-YHVEGDLRRDIAMNIKRLKEINCYRGMRHKKGLPVRGQKTKTNARTRK 110


>gi|160932175|ref|ZP_02079566.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753]
 gi|156868777|gb|EDO62149.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753]
          Length = 122

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG K++ +I     + P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEIGLSYIYGIGRKTATEILKATGVNPDTRVRDLTEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + +VEGDLRR VA +IKRL+++GCYRG+RHR+GLPVRGQR+ TNARTRK
Sbjct: 61  DHNCRVEGDLRRDVAFDIKRLIEIGCYRGVRHRKGLPVRGQRSKTNARTRK 111


>gi|18311361|ref|NP_563295.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13]
 gi|110801380|ref|YP_697068.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124]
 gi|110802938|ref|YP_699637.1| 30S ribosomal protein S13 [Clostridium perfringens SM101]
 gi|168205208|ref|ZP_02631213.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987]
 gi|168211879|ref|ZP_02637504.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626]
 gi|168215202|ref|ZP_02640827.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969]
 gi|168216657|ref|ZP_02642282.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239]
 gi|169347160|ref|ZP_02866102.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495]
 gi|182626922|ref|ZP_02954655.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721]
 gi|32363368|sp|Q8XHU8|RS13_CLOPE RecName: Full=30S ribosomal protein S13
 gi|123047165|sp|Q0SQH0|RS13_CLOPS RecName: Full=30S ribosomal protein S13
 gi|123049590|sp|Q0TMS2|RS13_CLOP1 RecName: Full=30S ribosomal protein S13
 gi|18146045|dbj|BAB82085.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13]
 gi|110676027|gb|ABG85014.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124]
 gi|110683439|gb|ABG86809.1| 30S ribosomal protein S13 [Clostridium perfringens SM101]
 gi|169296843|gb|EDS78972.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495]
 gi|170663261|gb|EDT15944.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987]
 gi|170710177|gb|EDT22359.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626]
 gi|170713398|gb|EDT25580.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969]
 gi|177907712|gb|EDT70327.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721]
 gi|182381222|gb|EDT78701.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239]
          Length = 121

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG  +SQ I     + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGLPTSQKILEVTGVNPDTRVKDLTEEEVNSIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D  VEGDLRR VA+NIKRL+++G YRG+RHR+GLP+RGQ+T TNARTRK
Sbjct: 61  -KDLTVEGDLRREVALNIKRLVEIGSYRGIRHRKGLPLRGQKTKTNARTRK 110


>gi|190571567|ref|YP_001975925.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018969|ref|ZP_03334776.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226712803|sp|B3CN47|RS13_WOLPP RecName: Full=30S ribosomal protein S13
 gi|190357839|emb|CAQ55295.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995078|gb|EEB55719.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 122

 Score =  134 bits (336), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K V  AL YIHGIG  ++  IC    I   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINVPVKKCVPFALTYIHGIGITTANIICRSCKIDERKRVLELQDEDIEKISSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q Y +EG+LR+ VAM+IK LM++GCYRGLRHR+GLPVRGQRTHTNA+TRK   K  +A 
Sbjct: 61  RQKYVIEGELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQRTHTNAKTRKGRSKLPIAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|206889222|ref|YP_002249223.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226712799|sp|B5YG25|RS13_THEYD RecName: Full=30S ribosomal protein S13
 gi|206741160|gb|ACI20217.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 121

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ +RV   L  I GIG   S  I  +  + P +RV  L + E+++IR  I
Sbjct: 1   MARIAGVDIPKNERVEIGLTRIFGIGRSLSNKILKETGVEPNKRVKDLTDDEIVKIRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEG+LR+ ++MNIKRLMD+GCYRGLRH   LPVRGQRT TN+RTRK
Sbjct: 61  EKNYKVEGELRKEISMNIKRLMDIGCYRGLRHMANLPVRGQRTRTNSRTRK 111


>gi|303230139|ref|ZP_07316908.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a]
 gi|303231267|ref|ZP_07318005.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514174|gb|EFL56178.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515200|gb|EFL57173.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a]
          Length = 122

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLADEILAKTGINPDTRVRDLSEDEVAKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK
Sbjct: 61  DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111


>gi|332107890|gb|EGJ09114.1| 30S ribosomal protein S13 [Rubrivivax benzoatilyticus JA2]
          Length = 121

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  ++Q IC+ + IP  ++V  L +SE+ +IR+ I
Sbjct: 1   MARIAGINIPPHKHAEIGLTSIYGIGRTTAQKICDSVGIPYSKKVKDLNDSELEKIREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK   KG  A 
Sbjct: 61  GR-LTIEGDLRRELSINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|34581391|ref|ZP_00142871.1| 30S ribosomal protein S13 [Rickettsia sibirica 246]
 gi|229586987|ref|YP_002845488.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5]
 gi|238650950|ref|YP_002916806.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic]
 gi|259494689|sp|C3PP85|RS13_RICAE RecName: Full=30S ribosomal protein S13
 gi|259494690|sp|C4K2F7|RS13_RICPU RecName: Full=30S ribosomal protein S13
 gi|28262776|gb|EAA26280.1| 30S ribosomal protein S13 [Rickettsia sibirica 246]
 gi|228022037|gb|ACP53745.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5]
 gi|238625048|gb|ACR47754.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic]
          Length = 125

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|152993916|ref|YP_001359637.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1]
 gi|158706288|sp|A6QCS1|RS13_SULNB RecName: Full=30S ribosomal protein S13
 gi|151425777|dbj|BAF73280.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1]
          Length = 120

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  +S+ I ++  I    RVH+L +++   IR  I
Sbjct: 1   MARIAGVDLPQKKRIEYALTYIYGIGLTTSRKILDRTGIDYNTRVHELTDAQAATIRNDI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++  VEGDLR+ V ++IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK
Sbjct: 61  QENVMVEGDLRKKVTLDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111


>gi|229542179|ref|ZP_04431239.1| ribosomal protein S13 [Bacillus coagulans 36D1]
 gi|229326599|gb|EEN92274.1| ribosomal protein S13 [Bacillus coagulans 36D1]
          Length = 121

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  I  + RV  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAQKILAEAGISEDTRVRDLTEDEVNKIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|307244743|ref|ZP_07526844.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
 gi|306491841|gb|EFM63893.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
          Length = 122

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I P+ R+ +L E +V ++R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGINPDTRIKELSEDQVNELRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK
Sbjct: 61  DEDHLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRK 111


>gi|323490647|ref|ZP_08095852.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2]
 gi|323395739|gb|EGA88580.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2]
          Length = 121

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI G+G  ++Q + +   I  E RV  L E E+  IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGVGKTTAQKVLSAAGISEETRVRDLTEDELNNIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q Y++EGDLRR V+MNIKRLM++  +RG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DQ-YKIEGDLRREVSMNIKRLMEIASFRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|167749413|ref|ZP_02421540.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702]
 gi|167657585|gb|EDS01715.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702]
 gi|291532115|emb|CBK97700.1| SSU ribosomal protein S13P [Eubacterium siraeum 70/3]
 gi|291558145|emb|CBL35262.1| SSU ribosomal protein S13P [Eubacterium siraeum V10Sc8a]
          Length = 123

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 84/112 (75%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L Y++GIG K++ DI  K  + P+ RV  L + +  +IR AI
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYVYGIGRKTANDILAKAGVNPDTRVKDLTDDDEAKIRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ    VEGDLRR VA+NIKRL+++ C+RG RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EQLGVAVEGDLRREVALNIKRLVEINCFRGTRHRKGLPVRGQRTKTNARTRK 112


>gi|15604483|ref|NP_221001.1| 30S ribosomal protein S13 [Rickettsia prowazekii str. Madrid E]
 gi|6226062|sp|Q9ZCS7|RS13_RICPR RecName: Full=30S ribosomal protein S13
 gi|3861177|emb|CAA15077.1| 30S RIBOSOMAL PROTEIN S13 (rpsM) [Rickettsia prowazekii]
 gi|292572265|gb|ADE30180.1| 30S ribosomal protein S13 [Rickettsia prowazekii Rp22]
          Length = 125

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V  L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKKVKVLTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDL+R V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|225574730|ref|ZP_03783340.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038059|gb|EEG48305.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM
           10507]
          Length = 122

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRPSATRILADAKVNPDTRVRDLTDEEVNRIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|49074668|gb|AAT49419.1| PA4241 [synthetic construct]
          Length = 119

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|15599437|ref|NP_252931.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1]
 gi|107103757|ref|ZP_01367675.1| hypothetical protein PaerPA_01004828 [Pseudomonas aeruginosa PACS2]
 gi|116052276|ref|YP_788878.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889430|ref|YP_002438294.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58]
 gi|254237105|ref|ZP_04930428.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719]
 gi|296387202|ref|ZP_06876701.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAb1]
 gi|313111395|ref|ZP_07797200.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016]
 gi|32363411|sp|Q9HWF7|RS13_PSEAE RecName: Full=30S ribosomal protein S13
 gi|122261425|sp|Q02T58|RS13_PSEAB RecName: Full=30S ribosomal protein S13
 gi|226712778|sp|B7V665|RS13_PSEA8 RecName: Full=30S ribosomal protein S13
 gi|9950458|gb|AAG07629.1|AE004841_7 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1]
 gi|115587497|gb|ABJ13512.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169036|gb|EAZ54547.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719]
 gi|218769653|emb|CAW25413.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58]
 gi|310883702|gb|EFQ42296.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016]
 gi|310941721|dbj|BAJ24214.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa]
          Length = 118

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|328884452|emb|CCA57691.1| SSU ribosomal protein S13p [Streptomyces venezuelae ATCC 10712]
          Length = 126

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRVV AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVVVALTYVFGIGRTRSEEILAATGVNPSTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + Q EGDLRR +A +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DANLQTEGDLRREIAADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|15892907|ref|NP_360621.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7]
 gi|22257033|sp|Q92GY8|RS13_RICCN RecName: Full=30S ribosomal protein S13
 gi|15620098|gb|AAL03522.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7]
          Length = 125

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|320538144|ref|ZP_08038039.1| 30S ribosomal protein S13 [Treponema phagedenis F0421]
 gi|320144961|gb|EFW36682.1| 30S ribosomal protein S13 [Treponema phagedenis F0421]
          Length = 121

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GI   S++ IC K  I P R ++ L + E+  IR  +
Sbjct: 1   MARIAGVDLPN-KHVNIALTYIYGISHSSAKTICEKAKIDPGRMMNDLDQDELAVIRSIL 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+DY+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR
Sbjct: 60  EKDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTR 109


>gi|160871560|ref|ZP_02061692.1| ribosomal protein S13p/S18e [Rickettsiella grylli]
 gi|159120359|gb|EDP45697.1| ribosomal protein S13p/S18e [Rickettsiella grylli]
          Length = 119

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV  L  I+G+G   +  IC  L I PE +V  L+E ++  IRQ I
Sbjct: 1   MARIAGVNIPINKHVVIGLTAIYGVGRSRALKICKGLNISPETKVKDLLEKQLDAIRQKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EGDLRR V+++IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  IT-YKIEGDLRREVSISIKRLMDLGCYRGIRHRRGLPVRGQRTRTNARTRK 110


>gi|325663037|ref|ZP_08151487.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086644|ref|ZP_08335721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470491|gb|EGC73721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409810|gb|EGG89245.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 122

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRVSSNRILEEAGVNPDTRVRDLTDEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DETQLVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|89100323|ref|ZP_01173188.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911]
 gi|89084944|gb|EAR64080.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911]
          Length = 121

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q +  +  +  + RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGKNTAQKVLAEAGVSEDTRVRDLTEDELNKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|127511114|ref|YP_001092311.1| 30S ribosomal protein S13 [Shewanella loihica PV-4]
 gi|158706276|sp|A3Q9A4|RS13_SHELP RecName: Full=30S ribosomal protein S13
 gi|126636409|gb|ABO22052.1| SSU ribosomal protein S13P [Shewanella loihica PV-4]
          Length = 118

 Score =  133 bits (335), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGLTRAQQICAATSIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|15612723|ref|NP_241026.1| 30S ribosomal protein S13 [Bacillus halodurans C-125]
 gi|6094152|sp|O50632|RS13_BACHD RecName: Full=30S ribosomal protein S13
 gi|2760183|dbj|BAA24192.1| ribosomal protein S13 [Bacillus halodurans]
 gi|4512429|dbj|BAA75296.1| rpsM homologue (identity of 84% to B. subtilis ) [Bacillus
           halodurans]
 gi|10172772|dbj|BAB03879.1| 30S ribosomal protein S13 [Bacillus halodurans C-125]
          Length = 121

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+G+G  ++Q+I  K  +    RV  L E E+ +IR A+
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGVGRSTAQEILAKANVSENTRVRDLTEEELGRIRSAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ ++VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  EE-FKVEGDLRREVSLNIKRLIEIGAYRGIRHRRGLPVRGQNTKNNSRTRK 110


>gi|225024810|ref|ZP_03714002.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC
           23834]
 gi|224942413|gb|EEG23622.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC
           23834]
          Length = 121

 Score =  133 bits (334), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP    VV  L  I+GIG   ++ ICN  AI P+ +V  L E ++  +R+ +
Sbjct: 1   MARVAGVNIPNNAHVVIGLQAIYGIGASRAKLICNNAAIAPDTKVKDLTEGQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q Y+VEGDLRR + MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AQ-YEVEGDLRREITMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|317496166|ref|ZP_07954526.1| 30S ribosomal protein S13 [Gemella moribillum M424]
 gi|316913741|gb|EFV35227.1| 30S ribosomal protein S13 [Gemella moribillum M424]
          Length = 121

 Score =  133 bits (334), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 86/111 (77%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K++Q I  +  +  + RV  L   ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTAQKILKEAGVSEDIRVKDLSGEQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRK 110


>gi|238018648|ref|ZP_04599074.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748]
 gi|269798525|ref|YP_003312425.1| ribosomal protein S13 [Veillonella parvula DSM 2008]
 gi|282849889|ref|ZP_06259272.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745]
 gi|294792819|ref|ZP_06757966.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27]
 gi|294794573|ref|ZP_06759709.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44]
 gi|237865119|gb|EEP66409.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748]
 gi|269095154|gb|ACZ25145.1| ribosomal protein S13 [Veillonella parvula DSM 2008]
 gi|282580326|gb|EFB85726.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745]
 gi|294454903|gb|EFG23276.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44]
 gi|294456718|gb|EFG25081.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27]
          Length = 122

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLASEIIAKTGINPDTRVRDLSEDEVAKIRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK
Sbjct: 61  DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111


>gi|150392134|ref|YP_001322183.1| 30S ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
 gi|166991596|sp|A6TWF6|RS13_ALKMQ RecName: Full=30S ribosomal protein S13
 gi|149951996|gb|ABR50524.1| ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
          Length = 123

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG ++S  I     I  + R+  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIFGIGRQTSNKILAATGINVDTRIKDLTEEEVNELRKLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DYQVEGDLRR V++NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK
Sbjct: 61  DADYQVEGDLRREVSLNIKRLKEIRCYRGIRHTKGLPVRGQKTKTNARTRK 111


>gi|229825292|ref|ZP_04451361.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC
           49176]
 gi|229790664|gb|EEP26778.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC
           49176]
          Length = 122

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   S +I  K A+ P+ R   L + +V +IR  I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRAKSNEILTKAAVDPDIRCKDLSDEQVGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+   VEGDLRR VAMNIKRL ++GCYRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  EESVLVEGDLRREVAMNIKRLQEIGCYRGVRHRKGLPVRGQNTKNNARTRK 111


>gi|262277115|ref|ZP_06054908.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114]
 gi|262224218|gb|EEY74677.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114]
          Length = 127

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVN+P  K+V  AL YI+GIG   +  IC +L I   +RV+ L + EV++IR+ I
Sbjct: 1   MARISGVNLPLNKQVHIALQYIYGIGDHYADKICKELNIEKSKRVNNLTDDEVLKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRT +NARTRK
Sbjct: 61  DEKFTVEGDLRREISLNIKRLRDLGTYRGTRHRKKLPVRGQRTSSNARTRK 111


>gi|94968279|ref|YP_590327.1| 30S ribosomal protein S13 [Candidatus Koribacter versatilis
           Ellin345]
 gi|158706207|sp|Q1IS97|RS13_ACIBL RecName: Full=30S ribosomal protein S13
 gi|94550329|gb|ABF40253.1| SSU ribosomal protein S13P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 127

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K +  AL YI GIG   ++ I  +  +   R+V  L E EV +IR AI
Sbjct: 1   MARIAGVDLPRNKYINIALTYIFGIGNSRAKAILAEANVEANRKVSDLNEEEVNRIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E    VEGDLR+ V+M+IKRL+++G YRG RHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  ENGSSVEGDLRKDVSMHIKRLIEIGSYRGYRHRRSLPVRGQRTHTNARTRKGPRKGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|51473817|ref|YP_067574.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington]
 gi|81390000|sp|Q68WA0|RS13_RICTY RecName: Full=30S ribosomal protein S13
 gi|51460129|gb|AAU04092.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington]
          Length = 125

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V  L + E+I++R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISRDKKVKVLTDQELIRLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ENEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|269959710|ref|ZP_06174090.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3]
 gi|269835633|gb|EEZ89712.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3]
          Length = 118

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|260907116|ref|ZP_05915438.1| 30S ribosomal protein S13 [Brevibacterium linens BL2]
          Length = 122

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +     +  I P+ RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGRTRASQTLTETGISPDTRVKDLSDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +QVEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTFQVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|77165766|ref|YP_344291.1| 30S ribosomal protein S13 [Nitrosococcus oceani ATCC 19707]
 gi|254433474|ref|ZP_05046982.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27]
 gi|91207709|sp|Q3J8T5|RS13_NITOC RecName: Full=30S ribosomal protein S13
 gi|76884080|gb|ABA58761.1| SSU ribosomal protein S13P [Nitrosococcus oceani ATCC 19707]
 gi|207089807|gb|EDZ67078.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27]
          Length = 118

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC  + +P ++++  L ++E+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALSSIYGIGLSRARKICGAVGVPSDKKIRDLSDNELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++M+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YPVEGDLRREISMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRK 110


>gi|119953289|ref|YP_945498.1| 30S ribosomal protein S13 [Borrelia turicatae 91E135]
 gi|254811131|sp|A1QZT6|RS13_BORT9 RecName: Full=30S ribosomal protein S13
 gi|119862060|gb|AAX17828.1| SSU ribosomal protein S13P [Borrelia turicatae 91E135]
          Length = 125

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  I PE+R   L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRARALEICRKTDILPEKRAKDLDNDEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111


>gi|187918366|ref|YP_001883929.1| 30S ribosomal protein S13 [Borrelia hermsii DAH]
 gi|226712700|sp|B2S0K3|RS13_BORHD RecName: Full=30S ribosomal protein S13
 gi|119861214|gb|AAX17009.1| SSU ribosomal protein S13P [Borrelia hermsii DAH]
          Length = 125

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  + P++R  +L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRARALEICEKTGVLPDKRAKELDNDEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRK 111


>gi|293402525|ref|ZP_06646660.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304039|gb|EFE45293.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 121

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  +++ I  K  I  + RV  L + ++  IR  +
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEQILAKTGISEDIRVKDLTDEQINAIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR VA+NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DS-IKVEGDLRREVALNIKRLMEIGCYRGIRHRKGLPVRGQRTKTNARTRK 110


>gi|323342812|ref|ZP_08083044.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463924|gb|EFY09118.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 121

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  +S++I  K  I  + RV  L E +V  IR+ +
Sbjct: 1   MARIAGIDIPRNKRVVVSLTYIYGIGLTTSKEILTKCEISEDIRVKDLTEEQVNAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V +NIKRLM++G  RG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  ES-IKVEGDLRREVNLNIKRLMEIGSNRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|304438386|ref|ZP_07398327.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368752|gb|EFM22436.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 122

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG  +++ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAADVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|253580645|ref|ZP_04857909.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848016|gb|EES75982.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39BFAA]
 gi|291548008|emb|CBL21116.1| 30S ribosomal protein S13 [Ruminococcus sp. SR1/5]
          Length = 122

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  K  + P+ RV  L + EV ++   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAKAEVNPDTRVRDLTDDEVKRLSAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|28897053|ref|NP_796658.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633]
 gi|149192391|ref|ZP_01870592.1| 30S ribosomal protein S13 [Vibrio shilonii AK1]
 gi|260361371|ref|ZP_05774436.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030]
 gi|260779481|ref|ZP_05888371.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260877971|ref|ZP_05890326.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034]
 gi|260903549|ref|ZP_05911944.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037]
 gi|323492141|ref|ZP_08097303.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546]
 gi|323495526|ref|ZP_08100600.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326]
 gi|32363283|sp|Q87SZ2|RS13_VIBPA RecName: Full=30S ribosomal protein S13
 gi|28805261|dbj|BAC58542.1| ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633]
 gi|148833782|gb|EDL50818.1| 30S ribosomal protein S13 [Vibrio shilonii AK1]
 gi|260604290|gb|EEX30594.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|308089753|gb|EFO39448.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034]
 gi|308109061|gb|EFO46601.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037]
 gi|308114566|gb|EFO52106.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030]
 gi|323313702|gb|EGA66804.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546]
 gi|323319407|gb|EGA72344.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326]
 gi|328471856|gb|EGF42733.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus 10329]
          Length = 118

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|238928131|ref|ZP_04659891.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531]
 gi|238884091|gb|EEQ47729.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531]
          Length = 122

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG  +++ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAANVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|92112576|ref|YP_572504.1| 30S ribosomal protein S13 [Chromohalobacter salexigens DSM 3043]
 gi|122420779|sp|Q1R0F3|RS13_CHRSD RecName: Full=30S ribosomal protein S13
 gi|91795666|gb|ABE57805.1| SSU ribosomal protein S13P [Chromohalobacter salexigens DSM 3043]
          Length = 118

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI GIG   +Q+IC    I P  +V  L   EV  +R  +
Sbjct: 1   MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICAATGIAPTAKVQDLSAEEVDTLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR   +NIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YTVEGDLRRDTTLNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRK 110


>gi|323700829|ref|ZP_08112741.1| 30S ribosomal protein S13 [Desulfovibrio sp. ND132]
 gi|323460761|gb|EGB16626.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans ND132]
          Length = 123

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   +  I     I        L   +V QIR  I
Sbjct: 1   MARIAGVDLPRNKRIDIALTYIYGIGRTMAMQILETTGIDWTMSSDDLTADDVNQIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR +  NIKRLMD+GCYRGLRHRRGLPVRGQ++ TNARTRK
Sbjct: 61  ENNYKVEGDLRREITTNIKRLMDIGCYRGLRHRRGLPVRGQKSKTNARTRK 111


>gi|269958605|ref|YP_003328392.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel]
 gi|269848434|gb|ACZ49078.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel]
          Length = 123

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I  +  V  L + +V++IR  I
Sbjct: 1   MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICKGCGISEDALVSSLGDEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307823463|ref|ZP_07653692.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96]
 gi|307735448|gb|EFO06296.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96]
          Length = 118

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G +++ +IC ++ I P  ++ +L E ++  IR  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGRQTASEICVEVGITPSIKIKELTEEQLEAIRNVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  SK-MTVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRK 110


>gi|157826041|ref|YP_001493761.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford]
 gi|166231919|sp|A8GPC8|RS13_RICAH RecName: Full=30S ribosomal protein S13
 gi|157799999|gb|ABV75253.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford]
          Length = 125

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L Y++G+G   + +ICNK  I  +++  +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYVYGLGPAMAAEICNKAKISKDKKAKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|307543847|ref|YP_003896326.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581]
 gi|307215871|emb|CBV41141.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581]
          Length = 118

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI GIG   +Q+IC    I P  +V +L   EV  +R  +
Sbjct: 1   MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICVAAGIAPTTKVQELSSEEVDTLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP+ GQRT TNARTRK
Sbjct: 61  GK-YTVEGDLRRDVTLNIKRLMDLGCYRGLRHRRGLPLNGQRTKTNARTRK 110


>gi|296268578|ref|YP_003651210.1| 30S ribosomal protein S13 [Thermobispora bispora DSM 43833]
 gi|296091365|gb|ADG87317.1| ribosomal protein S13 [Thermobispora bispora DSM 43833]
          Length = 126

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 86/111 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +++I     I P+ RV+QL ++E++ IR  I
Sbjct: 1   MARLVGVDLPRDKRLEIALTYIYGIGRSRAKEILKATGINPDLRVYQLTDAELVPIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V  +I+R +++GCY+G+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRKGLPVRGQRTQTNARTRK 111


>gi|260589252|ref|ZP_05855165.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
 gi|331082660|ref|ZP_08331783.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540333|gb|EEX20902.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
 gi|330400279|gb|EGG79921.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 123

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 84/112 (75%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  K  + P+ RV  + + EV +IR AI
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILEKAGVNPDTRVRDVTDEEVGKIRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+    VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  EELQIPVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 112


>gi|225873053|ref|YP_002754512.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196]
 gi|254811119|sp|C1F617|RS13_ACIC5 RecName: Full=30S ribosomal protein S13
 gi|225793801|gb|ACO33891.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196]
          Length = 127

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR K+   AL YI+GIG   +  I     + P R++  L E EV +IRQ I
Sbjct: 1   MARVAGVDLPRNKQARIALTYIYGIGNPRALRILTAANVDPFRKIQDLSEDEVNRIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + QVEGDLR+ VAM+IKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  EAEGQVEGDLRKDVAMHIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300690183|ref|YP_003751178.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07]
 gi|299077243|emb|CBJ49869.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07]
          Length = 121

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I+G+G   +Q IC    +P  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAVIGLTAIYGVGRSRAQKICEATGVPTNKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K G+A 
Sbjct: 61  NR-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGIAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261250395|ref|ZP_05942970.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891]
 gi|260938964|gb|EEX94951.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891]
          Length = 118

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELSEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|320160438|ref|YP_004173662.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1]
 gi|319994291|dbj|BAJ63062.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1]
          Length = 128

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI+GIG   +++      + P+ RV  L E+EV  +R  I
Sbjct: 1   MARIEGVDLPRNKRVEVALTYIYGIGPTRARETLAATKVNPDTRVKDLTEAEVNALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y VEGDLRR V M+IKRL+++GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  ARNYTVEGDLRREVQMSIKRLIEIGCYRGLRHRRNLPVRGQRTRTNARTRK 111


>gi|300857222|ref|YP_003782206.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528]
 gi|300437337|gb|ADK17104.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528]
          Length = 125

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  +SQ I  +  + P+ RV  L E EV  +R  +
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLSTSQKILKEAGVNPDTRVKDLTEEEVNSLRNYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  +EGDLRR +A+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  -KNVTIEGDLRREIALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRK 110


>gi|224542263|ref|ZP_03682802.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524805|gb|EEF93910.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM
           15897]
          Length = 121

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  +++ I     +  + RV  L E E  +IR+ +
Sbjct: 1   MARIAGIDIPRDKRVVVSLTYIYGIGPTTAKKILAAAGVSEDVRVKDLTEEEETKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   + EGDLRR   +NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EH-IKTEGDLRRETQLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|86148806|ref|ZP_01067073.1| 30S ribosomal protein S13 [Vibrio sp. MED222]
 gi|148982229|ref|ZP_01816655.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3]
 gi|218710727|ref|YP_002418348.1| 30S ribosomal protein S13 [Vibrio splendidus LGP32]
 gi|85833396|gb|EAQ51587.1| 30S ribosomal protein S13 [Vibrio sp. MED222]
 gi|145960591|gb|EDK25944.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3]
 gi|218323746|emb|CAV20100.1| ribosomal protein S13 [Vibrio splendidus LGP32]
          Length = 118

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|221195396|ref|ZP_03568451.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626]
 gi|221184583|gb|EEE16975.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626]
          Length = 122

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG   +  IC +  +  + RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGIGQTRATKICAETGVNVDTRVKDLTEDEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR V  N  RLM++GCYRGLRHR+GLPV GQRTHTNARTRK
Sbjct: 61  DANYTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRK 111


>gi|154249792|ref|YP_001410617.1| 30S ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1]
 gi|171769363|sp|A7HM27|RS13_FERNB RecName: Full=30S ribosomal protein S13
 gi|154153728|gb|ABS60960.1| ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1]
          Length = 123

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL Y++GIG   + +IC    + P++RV +L E E+ +I   I
Sbjct: 1   MARIVGVEIPSNKKVHIALRYLYGIGPTRAMEICKNTGVDPDKRVKELTEDEISKIASFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+Y+VEG+LR  V  NIKRLMD+GCYRGLRH+ GLPVRGQRT +NARTRK
Sbjct: 61  QQNYKVEGELRTEVMRNIKRLMDIGCYRGLRHKLGLPVRGQRTRSNARTRK 111


>gi|312884681|ref|ZP_07744382.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367594|gb|EFP95145.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 118

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|223983944|ref|ZP_03634104.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM
           12042]
 gi|223964136|gb|EEF68488.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM
           12042]
          Length = 121

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR K VV +L YI+GIG  +++ I  K  I  + RV  L + +V  IRQ +
Sbjct: 1   MARIAGIDIPRDKHVVVSLTYIYGIGSSTAKTILKKCGISEDIRVKDLTDEQVNAIRQEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q  +VEGDLRR   +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  DQ-IKVEGDLRRETQLNIKRLMEIGCYRGVRHRKGLPVRGQRTKTNARTRK 110


>gi|330837633|ref|YP_004412274.1| 30S ribosomal protein S13P [Spirochaeta coccoides DSM 17374]
 gi|329749536|gb|AEC02892.1| SSU ribosomal protein S13P [Spirochaeta coccoides DSM 17374]
          Length = 121

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 84/110 (76%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+  IC + A+ P+ R++ L   ++ ++R+ I
Sbjct: 1   MARIAGVDLPN-KAVKIALTYIYGIGNYSAAKICEQTAVNPDERLNNLSSEDLSKLREII 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +++VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR
Sbjct: 60  ENNFKVEGRLRTEVGLNIKRLMDIGCYRGLRHRKGLPVRGQRTKTNARTR 109


>gi|56416982|ref|YP_154056.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries]
 gi|222475350|ref|YP_002563767.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida]
 gi|254995158|ref|ZP_05277348.1| 30S ribosomal protein S13 [Anaplasma marginale str. Mississippi]
 gi|255003332|ref|ZP_05278296.1| 30S ribosomal protein S13 [Anaplasma marginale str. Puerto Rico]
 gi|255004456|ref|ZP_05279257.1| 30S ribosomal protein S13 [Anaplasma marginale str. Virginia]
 gi|81358978|sp|Q5PA79|RS13_ANAMM RecName: Full=30S ribosomal protein S13
 gi|254811123|sp|B9KJ49|RS13_ANAMF RecName: Full=30S ribosomal protein S13
 gi|56388214|gb|AAV86801.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries]
 gi|222419488|gb|ACM49511.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida]
          Length = 123

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I  +  V  L + +V++IR  I
Sbjct: 1   MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICEGCGIGEDVLVSSLSDEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|313893169|ref|ZP_07826746.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442522|gb|EFR60937.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 122

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV++IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLAAEIIAKTGINPDTRVRDLSEDEVVKIRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK
Sbjct: 61  DAEYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRK 111


>gi|260438191|ref|ZP_05792007.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
 gi|292809381|gb|EFF68586.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
          Length = 122

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I  +  + P  RV  L + EV +I+  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVSSNRILAEAKVDPNTRVKDLTDEEVGRIKDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|269217221|ref|ZP_06161075.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122]
 gi|269129358|gb|EEZ60443.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122]
          Length = 122

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+   L YI+GIG  S++ I     + P+ RV  + E ++ +IR+ I
Sbjct: 1   MPRLFGVDLPREKRIETGLTYIYGIGDTSAKKIIAATGVNPDIRVKDISEDDLQKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+  +EGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DQNMTIEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|119773376|ref|YP_926116.1| 30S ribosomal protein S13 [Shewanella amazonensis SB2B]
 gi|158706275|sp|A1S240|RS13_SHEAM RecName: Full=30S ribosomal protein S13
 gi|119765876|gb|ABL98446.1| SSU ribosomal protein S13P [Shewanella amazonensis SB2B]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC   AI  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGRTRAKAICAATAIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|303247015|ref|ZP_07333291.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ]
 gi|302491722|gb|EFL51605.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ]
          Length = 123

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  ++  I     +   +    L   E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIYGIGRTTALTILEASGVDWTKNSDALTPEETNTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  NIKRLMD+GCYRG RHRRGLP RGQRTHTNARTRK   +G +A+
Sbjct: 61  EANHKVEGDLRRDVTANIKRLMDIGCYRGFRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300088172|ref|YP_003758694.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527905|gb|ADJ26373.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 129

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K+VV +L YI+GIG   S  I ++L+I    RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDIPRNKQVVYSLPYIYGIGPTLSARILDRLSIEKTTRVSDLTEEELNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLR+ + +N+KRL D+G YRG RHRRGLPV GQRT TNARTR+
Sbjct: 61  DKEYRVEGDLRKEITLNVKRLTDIGSYRGQRHRRGLPVHGQRTKTNARTRR 111


>gi|310941931|dbj|BAJ24319.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAVKIKDLSDEQIEQLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|77461279|ref|YP_350786.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1]
 gi|91207719|sp|Q3K609|RS13_PSEPF RecName: Full=30S ribosomal protein S13
 gi|77385282|gb|ABA76795.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1]
 gi|310941781|dbj|BAJ24244.1| 30S ribosomal protein S13 [Pseudomonas chlororaphis subsp.
           chlororaphis]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC +  + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAETGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|58584578|ref|YP_198151.1| 30S ribosomal protein S13 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497932|sp|Q5GSW5|RS13_WOLTR RecName: Full=30S ribosomal protein S13
 gi|58418894|gb|AAW70909.1| Ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 122

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K +   L YI+GIG  ++  IC+   I   +RV +L + ++ +I   I
Sbjct: 1   MTRIAGVNVPVKKCIPFGLTYIYGIGISTANIICHACGIDKSKRVSELRDKDIEKINSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q+Y +EGDLR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK
Sbjct: 61  RQNYSIEGDLRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111


>gi|157960035|ref|YP_001500069.1| 30S ribosomal protein S13 [Shewanella pealeana ATCC 700345]
 gi|167626018|ref|YP_001676312.1| 30S ribosomal protein S13 [Shewanella halifaxensis HAW-EB4]
 gi|212634851|ref|YP_002311376.1| 30S ribosomal protein S13 [Shewanella piezotolerans WP3]
 gi|189044295|sp|B0TLZ1|RS13_SHEHH RecName: Full=30S ribosomal protein S13
 gi|189044296|sp|A8GYZ7|RS13_SHEPA RecName: Full=30S ribosomal protein S13
 gi|226712785|sp|B8CNF5|RS13_SHEPW RecName: Full=30S ribosomal protein S13
 gi|157845035|gb|ABV85534.1| ribosomal protein S13 [Shewanella pealeana ATCC 700345]
 gi|167356040|gb|ABZ78653.1| ribosomal protein S13 [Shewanella halifaxensis HAW-EB4]
 gi|212556335|gb|ACJ28789.1| Ribosomal protein S13 [Shewanella piezotolerans WP3]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGRTRAQAICAATSIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  -ANYIVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|170760916|ref|YP_001788795.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226712720|sp|B1KSJ9|RS13_CLOBM RecName: Full=30S ribosomal protein S13
 gi|169407905|gb|ACA56316.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 123

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KRV   L YI+GIG  +SQ+I     + P+ RV  L E EV  IR  +
Sbjct: 1   MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILEATGVNPDTRVKDLSEEEVNAIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK
Sbjct: 61  NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRK 111


>gi|262392494|ref|YP_003284348.1| 30S ribosomal protein S13p [Vibrio sp. Ex25]
 gi|269964715|ref|ZP_06178953.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B]
 gi|262336088|gb|ACY49883.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. Ex25]
 gi|269830614|gb|EEZ84835.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|238898905|ref|YP_002924587.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259494682|sp|C4K796|RS13_HAMD5 RecName: Full=30S ribosomal protein S13
 gi|229466665|gb|ACQ68439.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 118

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG  ++ DIC K  +    ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDKKHAVIALTSIYGIGRTTALDICAKTGVSAAVKISELSEKQIEELREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVTLNIKRLMDIGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|148381395|ref|YP_001255936.1| ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502]
 gi|153932993|ref|YP_001385770.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397]
 gi|153937296|ref|YP_001389177.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall]
 gi|153939368|ref|YP_001392808.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland]
 gi|168178858|ref|ZP_02613522.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916]
 gi|168181890|ref|ZP_02616554.1| 30S ribosomal protein S13 [Clostridium botulinum Bf]
 gi|170757214|ref|YP_001783095.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra]
 gi|187776601|ref|ZP_02993074.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC
           15579]
 gi|226950907|ref|YP_002805998.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto]
 gi|237796916|ref|YP_002864468.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657]
 gi|166231909|sp|A7FZ47|RS13_CLOB1 RecName: Full=30S ribosomal protein S13
 gi|166231910|sp|A5I7I0|RS13_CLOBH RecName: Full=30S ribosomal protein S13
 gi|166231911|sp|A7GJ48|RS13_CLOBL RecName: Full=30S ribosomal protein S13
 gi|226712719|sp|B1IGC8|RS13_CLOBK RecName: Full=30S ribosomal protein S13
 gi|254811140|sp|C1FMS5|RS13_CLOBJ RecName: Full=30S ribosomal protein S13
 gi|259494669|sp|C3KVM5|RS13_CLOB6 RecName: Full=30S ribosomal protein S13
 gi|148290879|emb|CAL85015.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502]
 gi|152929037|gb|ABS34537.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397]
 gi|152933210|gb|ABS38709.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall]
 gi|152935264|gb|ABS40762.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland]
 gi|169122426|gb|ACA46262.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra]
 gi|182670171|gb|EDT82147.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916]
 gi|182674848|gb|EDT86809.1| 30S ribosomal protein S13 [Clostridium botulinum Bf]
 gi|187775260|gb|EDU39062.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC
           15579]
 gi|226843905|gb|ACO86571.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto]
 gi|229261193|gb|ACQ52226.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657]
 gi|295320788|gb|ADG01166.1| 30S ribosomal protein S13 [Clostridium botulinum F str. 230613]
 gi|322807780|emb|CBZ05355.1| SSU ribosomal protein S13p (S18e) [Clostridium botulinum H04402
           065]
          Length = 123

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KRV   L YI+GIG  +SQ+I     + P+ RV  L E EV  IR  +
Sbjct: 1   MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILKATGVNPDTRVKDLSEEEVNAIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK
Sbjct: 61  NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRK 111


>gi|229829401|ref|ZP_04455470.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM
           14600]
 gi|229791832|gb|EEP27946.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM
           14600]
          Length = 122

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  +     + P+ RV  L + EV +I  AI
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRASSDAVLASANVDPDTRVKDLTDDEVKRISNAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+   VEGDLRR  A++IKRL ++GCYRG RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  EETLTVEGDLRRQTALDIKRLQEIGCYRGKRHRQGLPVRGQKTKTNARTRK 111


>gi|225849520|ref|YP_002729685.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644417|gb|ACN99467.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 116

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPEELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y+VEGDLRR VA+ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+
Sbjct: 61  EQNYKVEGDLRREVAVAIKRLVDMGCYRGVRHRLGLPVRGQRTKTNAKTRR 111


>gi|158319569|ref|YP_001512076.1| 30S ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
 gi|166991597|sp|A8MLG6|RS13_ALKOO RecName: Full=30S ribosomal protein S13
 gi|158139768|gb|ABW18080.1| ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
          Length = 123

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG K+S +I     I P+ R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIFGIGRKTSNNILAAAGINPDTRIKDLTEEEVNNLRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + D+ VEGDLRR +A+NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK
Sbjct: 61  DADHHVEGDLRREIALNIKRLKEIRCYRGIRHIKGLPVRGQKTKTNARTRK 111


>gi|237786337|ref|YP_002907042.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259494670|sp|C4LKZ4|RS13_CORK4 RecName: Full=30S ribosomal protein S13
 gi|237759249|gb|ACR18499.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 122

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG  S++ +  K  I P+ R   L + +V ++R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTSAKQLLEKTEISPDLRTDALTDDQVAKLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EAEYTVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|56418666|ref|YP_145984.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426]
 gi|138893808|ref|YP_001124261.1| 30S ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2]
 gi|196250999|ref|ZP_03149681.1| ribosomal protein S13 [Geobacillus sp. G11MC16]
 gi|297528507|ref|YP_003669782.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3]
 gi|81348360|sp|Q5L3R4|RS13_GEOKA RecName: Full=30S ribosomal protein S13
 gi|158706233|sp|A4IJL2|RS13_GEOTN RecName: Full=30S ribosomal protein S13
 gi|56378508|dbj|BAD74416.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426]
 gi|134265321|gb|ABO65516.1| Ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2]
 gi|196209471|gb|EDY04248.1| ribosomal protein S13 [Geobacillus sp. G11MC16]
 gi|297251759|gb|ADI25205.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3]
          Length = 121

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|289706557|ref|ZP_06502907.1| 30S ribosomal protein S13 [Micrococcus luteus SK58]
 gi|289556692|gb|EFD50033.1| 30S ribosomal protein S13 [Micrococcus luteus SK58]
          Length = 122

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++  +   I P  RV  L + +++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLSATGIDPNIRVKDLSDEQLVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|258406162|ref|YP_003198904.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692]
 gi|257798389|gb|ACV69326.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692]
          Length = 123

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR   AL YI+GIG  ++  I + + +   ++   L   EV  IR  +
Sbjct: 1   MARIAGVDLPRNKRADIALTYIYGIGRTTALAILDSVGVDWTKKTDALSNDEVNSIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y+VEGDLRR V  NIKRLMD+GCYRGLRHRR LP RGQRT TNARTRK
Sbjct: 61  EKTYKVEGDLRREVRANIKRLMDIGCYRGLRHRRSLPARGQRTGTNARTRK 111


>gi|269123122|ref|YP_003305699.1| 30S ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
 gi|268314448|gb|ACZ00822.1| ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
          Length = 121

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   S +I  K  I  + +V  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEVSLTYIYGIGRSISNEILVKAGINRDTKVKDLTEEEVGKIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL D+ CYRGLRHR GLPVRGQ+T TNARTRK   K  VA+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLTDIKCYRGLRHRMGLPVRGQKTKTNARTRKGPAKMAVAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|309389909|gb|ADO77789.1| SSU ribosomal protein S13P [Halanaerobium praevalens DSM 2228]
          Length = 126

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++Q I     I  + R+  L E+E+  +R+ I
Sbjct: 1   MARIEGVDLPRNKRVEIGLTYIYGIGRTTAQSIVANTGINSDTRIKDLTEAEISDLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y VEG+LRR    +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DENYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRK 111


>gi|218961409|ref|YP_001741184.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730066|emb|CAO80978.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 122

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA IAG+ +P+ KR+   L YI+GIG  S+++IC K  I   ++V  L   E   +R  I
Sbjct: 1   MAHIAGIELPKNKRLFIGLTYIYGIGRSSAREICKKANIDEMKKVADLTMEEEKILRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEG LR  VAMNIKRLM++GCYRGLRH+RGLPVRGQRTHTNARTRK
Sbjct: 61  HNEYVVEGALRTQVAMNIKRLMEIGCYRGLRHKRGLPVRGQRTHTNARTRK 111


>gi|260770935|ref|ZP_05879864.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972]
 gi|260614172|gb|EEX39362.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972]
 gi|315178981|gb|ADT85895.1| 30S ribosomal protein S13 [Vibrio furnissii NCTC 11218]
          Length = 118

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEHVKISELTEDQINQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|300114714|ref|YP_003761289.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113]
 gi|299540651|gb|ADJ28968.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113]
          Length = 118

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC  + +P +++V  L ++E+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALSSIYGIGLSRARKICKAVGVPSDKKVRDLSDNELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++M+IKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YPVEGDLRRGISMDIKRLMDLGCYRGHRHRRGLPVRGQRTQTNARTRK 110


>gi|288942050|ref|YP_003444290.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180]
 gi|288897422|gb|ADC63258.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180]
          Length = 118

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/111 (62%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V AL  I+GIG   +  IC+   I    +V  L E EV ++R  +
Sbjct: 1   MARIAGVNIPDKKHAVIALTAIYGIGRTRAGLICDAAGIARTTKVQSLTEEEVDKLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-YSVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRK 110


>gi|225552343|ref|ZP_03773283.1| ribosomal protein S13p/S18e [Borrelia sp. SV1]
 gi|225371341|gb|EEH00771.1| ribosomal protein S13p/S18e [Borrelia sp. SV1]
          Length = 125

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKVAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|255020789|ref|ZP_05292847.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969785|gb|EET27289.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC
           51756]
          Length = 118

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K++  AL YI+GIG   S+ I     +P + RV  + E+E+ +IR  +
Sbjct: 1   MARIAGVNIPNNKQIETALTYIYGIGPSRSKQILAAAEVPFDIRVKDISEAELERIRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK
Sbjct: 61  GK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRK 110


>gi|304413167|ref|ZP_07394640.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola
           LSR1]
 gi|304284010|gb|EFL92403.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola
           LSR1]
          Length = 118

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC    +    ++ +L E E+ ++R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTGAQKICGAAGVAESVKISELSEEEINKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YPIEGDLRRQVTLNIKRLIDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|319654894|ref|ZP_08008969.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2]
 gi|317393457|gb|EFV74220.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2]
          Length = 121

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDVPREKRVVISLTYIFGIGKSTAQKVLAEAGVSEDTRVRDLTEDELNKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|188996214|ref|YP_001930465.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931281|gb|ACD65911.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 116

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRRFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y+VEGDLRR V++ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+
Sbjct: 61  EQNYKVEGDLRREVSLAIKRLVDMGCYRGIRHRLGLPVRGQRTKTNAKTRR 111


>gi|26554442|ref|NP_758376.1| 30S ribosomal protein S13 [Mycoplasma penetrans HF-2]
 gi|32363326|sp|Q8EUD6|RS13_MYCPE RecName: Full=30S ribosomal protein S13
 gi|26454452|dbj|BAC44780.1| ribosomal protein S13 [Mycoplasma penetrans HF-2]
          Length = 124

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KRVV +L YI GIG   SQ+I +K  I   ++V  L E E+  IR+ I
Sbjct: 1   MARILGVDIPNNKRVVISLTYIFGIGKSRSQEILSKAKIDENKKVSALSEEELATIRK-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y +EGDLRR VAMNIKRLM++G YRG+RHRR LPVRGQRT  NARTRK
Sbjct: 60  ASEYVIEGDLRREVAMNIKRLMEIGSYRGIRHRRNLPVRGQRTKCNARTRK 110


>gi|270264351|ref|ZP_06192617.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13]
 gi|270041487|gb|EFA14585.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13]
          Length = 118

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|154483164|ref|ZP_02025612.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC
           27560]
 gi|149735972|gb|EDM51858.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC
           27560]
          Length = 127

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS+ I  +  + P+ R   L + EV +I   I
Sbjct: 6   MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILTEAGVNPDTRCKDLTDDEVKKISDVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 66  DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQNTKNNARTRK 116


>gi|328955888|ref|YP_004373221.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2]
 gi|328456212|gb|AEB07406.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2]
          Length = 124

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++  IC    I P+ RV  L E EV  IR  I
Sbjct: 1   MARINGVDLPREKRVEIGLTYIYGIGRTTATKICVTCNINPDTRVRDLTEDEVNAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++   VEGDLRR    N+KRLMD+G YRGLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DKNRIMVEGDLRRDQNQNVKRLMDIGAYRGLRHRRGLPVRGQRTHTNARTRK 112


>gi|221218102|ref|ZP_03589568.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a]
 gi|224532893|ref|ZP_03673505.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23]
 gi|224533622|ref|ZP_03674211.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a]
 gi|225548633|ref|ZP_03769680.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a]
 gi|225549635|ref|ZP_03770601.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a]
 gi|221192050|gb|EEE18271.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a]
 gi|224512169|gb|EEF82558.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23]
 gi|224513295|gb|EEF83657.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a]
 gi|225369912|gb|EEG99359.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a]
 gi|225370663|gb|EEH00099.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a]
 gi|312148169|gb|ADQ30828.1| ribosomal protein S13p/S18e [Borrelia burgdorferi JD1]
          Length = 125

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|114330595|ref|YP_746817.1| 30S ribosomal protein S13 [Nitrosomonas eutropha C91]
 gi|122314411|sp|Q0AIH4|RS13_NITEC RecName: Full=30S ribosomal protein S13
 gi|114307609|gb|ABI58852.1| SSU ribosomal protein S13P [Nitrosomonas eutropha C91]
          Length = 119

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V  AL  I+GIG  +++ IC  L IPP  ++ +L + ++ ++R +I
Sbjct: 1   MARIAGVNLPSNKHVNIALTAIYGIGNSTARKICTDLDIPPFIKLKELTDGKLEELRNSI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-LLVEGDLRREVSMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|51245001|ref|YP_064885.1| 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54]
 gi|81642539|sp|Q6AP46|RS13_DESPS RecName: Full=30S ribosomal protein S13
 gi|50876038|emb|CAG35878.1| probable 30S ribosomal protein S13 [Desulfotalea psychrophila
           LSv54]
          Length = 121

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 83/121 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K + RAL YIHGIG  S++ I + + +P       L    V +IR+ I
Sbjct: 1   MARIAGIDLPKNKHIDRALTYIHGIGLTSARKILDAVELPYTMNSDDLDGETVNRIRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEGD RR V+M+IKRL DLGCYRG RHR GLP RGQ+T TNARTRK   +G   R
Sbjct: 61  EADYTVEGDRRREVSMDIKRLTDLGCYRGRRHRMGLPCRGQKTKTNARTRKGPRRGAARR 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|15642569|ref|NP_232202.1| 30S ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674839|ref|YP_001218068.1| 30S ribosomal protein S13 [Vibrio cholerae O395]
 gi|153217778|ref|ZP_01951421.1| ribosomal protein S13 [Vibrio cholerae 1587]
 gi|153827709|ref|ZP_01980376.1| ribosomal protein S13 [Vibrio cholerae MZO-2]
 gi|153831169|ref|ZP_01983836.1| ribosomal protein S13 [Vibrio cholerae 623-39]
 gi|227082691|ref|YP_002811242.1| ribosomal protein S13 [Vibrio cholerae M66-2]
 gi|229507374|ref|ZP_04396879.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286]
 gi|229509702|ref|ZP_04399183.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33]
 gi|229513497|ref|ZP_04402961.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21]
 gi|229516827|ref|ZP_04406273.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9]
 gi|229521640|ref|ZP_04411058.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80]
 gi|229527496|ref|ZP_04416888.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)]
 gi|229606880|ref|YP_002877528.1| 30S ribosomal protein S13 [Vibrio cholerae MJ-1236]
 gi|254292239|ref|ZP_04963002.1| ribosomal protein S13 [Vibrio cholerae AM-19226]
 gi|254851114|ref|ZP_05240464.1| ribosomal protein S13 [Vibrio cholerae MO10]
 gi|255744457|ref|ZP_05418409.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101]
 gi|258622734|ref|ZP_05717752.1| 30S ribosomal protein S13 [Vibrio mimicus VM573]
 gi|258625762|ref|ZP_05720641.1| 30S ribosomal protein S13 [Vibrio mimicus VM603]
 gi|261211129|ref|ZP_05925418.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341]
 gi|262166595|ref|ZP_06034332.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223]
 gi|262170489|ref|ZP_06038167.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451]
 gi|262401861|ref|ZP_06078426.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586]
 gi|297581416|ref|ZP_06943339.1| ribosomal protein S13 [Vibrio cholerae RC385]
 gi|298500602|ref|ZP_07010406.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757]
 gi|32363415|sp|Q9KP05|RS13_VIBCH RecName: Full=30S ribosomal protein S13
 gi|9657160|gb|AAF95715.1| ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|124113315|gb|EAY32135.1| ribosomal protein S13 [Vibrio cholerae 1587]
 gi|146316722|gb|ABQ21261.1| ribosomal protein S13 [Vibrio cholerae O395]
 gi|148873356|gb|EDL71491.1| ribosomal protein S13 [Vibrio cholerae 623-39]
 gi|149737818|gb|EDM52723.1| ribosomal protein S13 [Vibrio cholerae MZO-2]
 gi|150421841|gb|EDN13825.1| ribosomal protein S13 [Vibrio cholerae AM-19226]
 gi|227010579|gb|ACP06791.1| ribosomal protein S13 [Vibrio cholerae M66-2]
 gi|227014463|gb|ACP10673.1| ribosomal protein S13 [Vibrio cholerae O395]
 gi|229335128|gb|EEO00613.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)]
 gi|229341234|gb|EEO06238.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80]
 gi|229345890|gb|EEO10862.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9]
 gi|229349374|gb|EEO14330.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21]
 gi|229353176|gb|EEO18115.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33]
 gi|229354879|gb|EEO19800.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286]
 gi|229369535|gb|ACQ59958.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae MJ-1236]
 gi|254846819|gb|EET25233.1| ribosomal protein S13 [Vibrio cholerae MO10]
 gi|255737982|gb|EET93375.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101]
 gi|258582000|gb|EEW06870.1| 30S ribosomal protein S13 [Vibrio mimicus VM603]
 gi|258584922|gb|EEW09653.1| 30S ribosomal protein S13 [Vibrio mimicus VM573]
 gi|260839630|gb|EEX66241.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341]
 gi|261891565|gb|EEY37551.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451]
 gi|262026311|gb|EEY44979.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223]
 gi|262351833|gb|EEZ00964.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586]
 gi|297534254|gb|EFH73092.1| ribosomal protein S13 [Vibrio cholerae RC385]
 gi|297540771|gb|EFH76828.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757]
 gi|327485056|gb|AEA79463.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae LMA3894-4]
          Length = 118

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   L I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|51598755|ref|YP_072943.1| 30S ribosomal protein S13 [Borrelia garinii PBi]
 gi|219684427|ref|ZP_03539371.1| ribosomal protein S13p/S18e [Borrelia garinii PBr]
 gi|219685178|ref|ZP_03539998.1| ribosomal protein S13p/S18e [Borrelia garinii Far04]
 gi|81609962|sp|Q661C0|RS13_BORGA RecName: Full=30S ribosomal protein S13
 gi|51573326|gb|AAU07351.1| ribosomal protein S13 [Borrelia garinii PBi]
 gi|219672416|gb|EED29469.1| ribosomal protein S13p/S18e [Borrelia garinii PBr]
 gi|219673274|gb|EED30293.1| ribosomal protein S13p/S18e [Borrelia garinii Far04]
          Length = 125

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|28867876|ref|NP_790495.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|66047754|ref|YP_237595.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a]
 gi|71733419|ref|YP_276684.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|213969236|ref|ZP_03397374.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1]
 gi|237797454|ref|ZP_04585915.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|257483207|ref|ZP_05637248.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289623827|ref|ZP_06456781.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648920|ref|ZP_06480263.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289675510|ref|ZP_06496400.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae FF5]
 gi|298489074|ref|ZP_07007096.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301381743|ref|ZP_07230161.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato Max13]
 gi|302061057|ref|ZP_07252598.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato K40]
 gi|302130802|ref|ZP_07256792.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|302189299|ref|ZP_07265972.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae 642]
 gi|32363285|sp|Q889U9|RS13_PSESM RecName: Full=30S ribosomal protein S13
 gi|75500421|sp|Q4ZMR5|RS13_PSEU2 RecName: Full=30S ribosomal protein S13
 gi|91207716|sp|Q48D58|RS13_PSE14 RecName: Full=30S ribosomal protein S13
 gi|28851112|gb|AAO54190.1| ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000]
 gi|63258461|gb|AAY39557.1| Ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a]
 gi|71553972|gb|AAZ33183.1| ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|213925914|gb|EEB59471.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1]
 gi|298156386|gb|EFH97484.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322300|gb|EFW78394.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331958|gb|EFW87894.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330869409|gb|EGH04118.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330879397|gb|EGH13546.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879420|gb|EGH13569.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330891910|gb|EGH24571.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330899714|gb|EGH31133.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330940912|gb|EGH43863.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330962503|gb|EGH62763.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. maculicola str.
           ES4326]
 gi|330966889|gb|EGH67149.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|330969799|gb|EGH69865.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330976662|gb|EGH76705.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|330988260|gb|EGH86363.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331012435|gb|EGH92491.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331018182|gb|EGH98238.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
 gi|331020304|gb|EGI00361.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 118

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|74316445|ref|YP_314185.1| 30S ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259]
 gi|91207631|sp|Q3SLM7|RS13_THIDA RecName: Full=30S ribosomal protein S13
 gi|74055940|gb|AAZ96380.1| ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259]
          Length = 118

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V AL  I+GIG  +S  IC    I    ++  L E+E+ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHAVIALTAIYGIGRTTSGKICEAAGIAQTSKIKDLSEAEMERLREGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TNARTRK
Sbjct: 61  SK-FTVEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNARTRK 110


>gi|313680490|ref|YP_004058229.1| SSU ribosomal protein s13p [Oceanithermus profundus DSM 14977]
 gi|313153205|gb|ADR37056.1| SSU ribosomal protein S13P [Oceanithermus profundus DSM 14977]
          Length = 126

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++      I    RV  L E +V+++R  +
Sbjct: 1   MARIAGVEIPRNKRVEIALTYIYGIGRTRAKEALEATGIDGSIRVKDLSEQDVVKLRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  ENKWKLEGELRSEVQSNIKRLMDIGCYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|266620237|ref|ZP_06113172.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479]
 gi|288868141|gb|EFD00440.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479]
          Length = 122

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  ADSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111


>gi|73661996|ref|YP_300777.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82581616|sp|Q49ZE4|RS13_STAS1 RecName: Full=30S ribosomal protein S13
 gi|72494511|dbj|BAE17832.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 121

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  + PE RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTTTANKIAEEANVSPETRVKDLTDDELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  D-NYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|157372755|ref|YP_001480744.1| 30S ribosomal protein S13 [Serratia proteamaculans 568]
 gi|166991603|sp|A8GKH6|RS13_SERP5 RecName: Full=30S ribosomal protein S13
 gi|157324519|gb|ABV43616.1| ribosomal protein S13 [Serratia proteamaculans 568]
          Length = 118

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAEHVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|289423653|ref|ZP_06425452.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
 gi|289155903|gb|EFD04569.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
          Length = 123

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I  + R+  L + EV  +R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGISKDARIKDLSDDEVNVLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++DY VEGDLRR +++NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK
Sbjct: 61  DEDYLVEGDLRREISLNIKRLRDIKCYRGMRHAKGLPLRGQKTKTNARTRK 111


>gi|325981827|ref|YP_004294229.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212]
 gi|325531346|gb|ADZ26067.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212]
          Length = 119

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +  AL  I+GIG  SS D+C  + I  + ++  L E ++  IR  +
Sbjct: 1   MARIAGVNIPNHKHIGIALTSIYGIGRTSSTDLCKAVGIDIDIKLKDLSEDQIELIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +EGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  SK-LTIEGDLRREISMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|27364193|ref|NP_759721.1| 30S ribosomal protein S13 [Vibrio vulnificus CMCP6]
 gi|37678580|ref|NP_933189.1| 30S ribosomal protein S13 [Vibrio vulnificus YJ016]
 gi|320157579|ref|YP_004189958.1| 30S ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O]
 gi|32363317|sp|Q8DE61|RS13_VIBVU RecName: Full=30S ribosomal protein S13
 gi|71153726|sp|Q7MPG7|RS13_VIBVY RecName: Full=30S ribosomal protein S13
 gi|27360311|gb|AAO09248.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus CMCP6]
 gi|37197320|dbj|BAC93160.1| ribosomal protein S13 [Vibrio vulnificus YJ016]
 gi|319932891|gb|ADV87755.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O]
          Length = 118

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   + I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|295109499|emb|CBL23452.1| 30S ribosomal protein S13 [Ruminococcus obeum A2-162]
          Length = 122

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + +V +I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRASADKILAQAGVNPDIRVRDLTDDDVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|86739320|ref|YP_479720.1| 30S ribosomal protein S13 [Frankia sp. CcI3]
 gi|123724242|sp|Q2JFF1|RS13_FRASC RecName: Full=30S ribosomal protein S13
 gi|86566182|gb|ABD09991.1| SSU ribosomal protein S13P [Frankia sp. CcI3]
          Length = 126

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S+D     A+ P+ RV  L E E++++R  I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATAVNPDTRVRDLSEEEIVRLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|50364963|ref|YP_053388.1| 30S ribosomal protein S13 [Mesoplasma florum L1]
 gi|81391972|sp|Q6F1W9|RS13_MESFL RecName: Full=30S ribosomal protein S13
 gi|50363519|gb|AAT75504.1| 30S ribosomal protein S13 [Mesoplasma florum L1]
          Length = 121

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  +SQ + +KL I  + R   L E ++  I   I
Sbjct: 1   MARISGVEIPNEKRVVISLTYIYGIGLSTSQKVLSKLNISEDVRTRDLTEEQIKAISTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++VEG+LRR V++NIKRLM++GCYRGLRHR+GLPVRGQ + TNART K
Sbjct: 61  -SNFKVEGELRREVSLNIKRLMEIGCYRGLRHRKGLPVRGQSSKTNARTVK 110


>gi|205372044|ref|ZP_03224861.1| 30S ribosomal protein S13 [Bacillus coahuilensis m4-4]
          Length = 127

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+G+G  ++Q I  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGVGKNTAQKILAEAGVSEDTRVRDLTEEELGKIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR +++NIKRLM++G +RG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DT-YKVEGDLRREISLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|37912967|gb|AAR05299.1| ribosomal protein S13 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063198|gb|AAR38035.1| ribosomal protein S13 [uncultured marine bacterium 562]
          Length = 119

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V  +L +I GIG K++QDIC +L I   R++  L E EV  +R AI
Sbjct: 1   MARIAGVNIPENKHVEISLTHIFGIGRKTAQDICKELKIDYTRKISDLTEDEVENLRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++ NIKRLMDLG YRG+RHRR LP RGQ T  NARTRK
Sbjct: 61  GK-FVVEGDLRRNISTNIKRLMDLGSYRGIRHRRKLPTRGQNTKNNARTRK 110


>gi|157804013|ref|YP_001492562.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel]
 gi|157785276|gb|ABV73777.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel]
          Length = 145

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIA VN+P  KR+V +L YI+G+G   + +IC+K  I  +++V +L + E+I +R  I
Sbjct: 21  VARIASVNVPDNKRLVVSLTYIYGLGPTMAAEICSKAKISKDKKVKELTDQELISLRNII 80

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK
Sbjct: 81  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRK 131


>gi|206895241|ref|YP_002247310.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM
           5265]
 gi|226712721|sp|B5Y963|RS13_COPPD RecName: Full=30S ribosomal protein S13
 gi|206737858|gb|ACI16936.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM
           5265]
          Length = 124

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  KR+V AL  I+GIG  +++DIC  L I P +++ +L   ++  ++  I
Sbjct: 1   MARIVGVELPDNKRIVFALPRIYGIGKSTAEDICEALGIDPMQKLGELTPEQINTLQDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y+VEGDLRR VAMNIKRLMD+ CYRG+RH+RGLPVRGQRT  NARTRK
Sbjct: 61  TAHYKVEGDLRREVAMNIKRLMDIKCYRGIRHQRGLPVRGQRTRHNARTRK 111


>gi|15594845|ref|NP_212634.1| 30S ribosomal protein S13 [Borrelia burgdorferi B31]
 gi|195941637|ref|ZP_03087019.1| 30S ribosomal protein S13 [Borrelia burgdorferi 80a]
 gi|216264479|ref|ZP_03436471.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a]
 gi|218249265|ref|YP_002375010.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7]
 gi|223888816|ref|ZP_03623407.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b]
 gi|226320981|ref|ZP_03796526.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805]
 gi|226321810|ref|ZP_03797336.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26]
 gi|3914889|sp|O51453|RS13_BORBU RecName: Full=30S ribosomal protein S13
 gi|226712698|sp|B7J265|RS13_BORBZ RecName: Full=30S ribosomal protein S13
 gi|2688391|gb|AAC66842.1| ribosomal protein S13 (rpsM) [Borrelia burgdorferi B31]
 gi|215980952|gb|EEC21759.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a]
 gi|218164453|gb|ACK74514.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7]
 gi|223885632|gb|EEF56731.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b]
 gi|226232999|gb|EEH31752.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26]
 gi|226233582|gb|EEH32318.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805]
 gi|312149489|gb|ADQ29560.1| ribosomal protein S13p/S18e [Borrelia burgdorferi N40]
          Length = 125

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYIVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|253995741|ref|YP_003047805.1| 30S ribosomal protein S13 [Methylotenera mobilis JLW8]
 gi|253982420|gb|ACT47278.1| ribosomal protein S13 [Methylotenera mobilis JLW8]
          Length = 120

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG  ++Q IC    +    ++  L +++V ++R  +
Sbjct: 1   MARIAGVNIPNNKHTEIALTAIYGIGRNTAQKICVAAGVLATAKIKDLNDADVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YKVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|70732862|ref|YP_262629.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf-5]
 gi|330812054|ref|YP_004356516.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|91207717|sp|Q4K554|RS13_PSEF5 RecName: Full=30S ribosomal protein S13
 gi|68347161|gb|AAY94767.1| ribosomal protein S13p/S18e [Pseudomonas fluorescens Pf-5]
 gi|327380162|gb|AEA71512.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 118

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVTGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|227549865|ref|ZP_03979914.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078120|gb|EEI16083.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291]
          Length = 122

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGATRSKELLEKTGISPDLRTDNLTDDQLAALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ESSYTVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|83748172|ref|ZP_00945199.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551]
 gi|207721874|ref|YP_002252312.1| 30S ribosomal protein S13 [Ralstonia solanacearum MolK2]
 gi|207744553|ref|YP_002260945.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609]
 gi|300702803|ref|YP_003744404.1| 30S ribosomal protein S13 [Ralstonia solanacearum CFBP2957]
 gi|83725140|gb|EAP72291.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551]
 gi|206587042|emb|CAQ17626.1| 30s ribosomal protein s13 [Ralstonia solanacearum MolK2]
 gi|206595959|emb|CAQ62886.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609]
 gi|299070465|emb|CBJ41760.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CFBP2957]
          Length = 121

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  ++GIG   ++ IC    +P  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAVYGIGRSRARKICEVTGVPTNKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  NK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|317049818|ref|YP_004117466.1| 30S ribosomal protein S13 [Pantoea sp. At-9b]
 gi|316951435|gb|ADU70910.1| 30S ribosomal protein S13 [Pantoea sp. At-9b]
          Length = 118

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC +  I    ++ +L E ++ Q+R A+
Sbjct: 1   MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|238922854|ref|YP_002936367.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656]
 gi|259494677|sp|C4ZBU3|RS13_EUBR3 RecName: Full=30S ribosomal protein S13
 gi|238874526|gb|ACR74233.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656]
 gi|291523754|emb|CBK89341.1| 30S ribosomal protein S13 [Eubacterium rectale DSM 17629]
 gi|291528780|emb|CBK94366.1| 30S ribosomal protein S13 [Eubacterium rectale M104/1]
          Length = 122

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILEAANVDPSTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|323357348|ref|YP_004223744.1| ribosomal protein S13 [Microbacterium testaceum StLB037]
 gi|323273719|dbj|BAJ73864.1| ribosomal protein S13 [Microbacterium testaceum StLB037]
          Length = 124

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV AL YI+G+G   S +I N   I  + RV  L + +++ +R  I
Sbjct: 1   MARLAGVDIPRDKRVVIALTYIYGVGRTRSVEILNATGISQDVRVKDLTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|290477171|ref|YP_003470086.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004]
 gi|289176519|emb|CBJ83328.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004]
          Length = 118

 Score =  130 bits (327), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQQICEAACIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|164686551|ref|ZP_02210579.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM
           16795]
 gi|164604420|gb|EDQ97885.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM
           16795]
          Length = 123

 Score =  130 bits (327), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR    L YI+GIG  ++ +I  K  I P+ R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPNEKRAEIGLTYIYGIGRATANEILAKAEINPDTRIKDLSEEEVNTLRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK
Sbjct: 61  DNDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRK 111


>gi|157377429|ref|YP_001476029.1| 30S ribosomal protein S13 [Shewanella sediminis HAW-EB3]
 gi|189044297|sp|A8G1C8|RS13_SHESH RecName: Full=30S ribosomal protein S13
 gi|157319803|gb|ABV38901.1| ribosomal protein S13 [Shewanella sediminis HAW-EB3]
          Length = 118

 Score =  130 bits (327), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDQKHTVIALTGIFGIGRTRARAICATTSIAEDAKIKELSEAQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|292492443|ref|YP_003527882.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4]
 gi|291581038|gb|ADE15495.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4]
          Length = 118

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   ++ IC    +  +++V  L +SE+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALTSIYGVGPTRAKKICEAAGVASDKKVKDLSDSELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YPVEGDLRREISMDIKRLMDLGCYRGLRHRRGLPVRGQRTQTNARTRK 110


>gi|42524355|ref|NP_969735.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100]
 gi|81616519|sp|Q6MJ33|RS13_BDEBA RecName: Full=30S ribosomal protein S13
 gi|39576564|emb|CAE80728.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100]
          Length = 124

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI+GIG   +  IC ++ IP E R   L +  + +IR  +
Sbjct: 1   MARILGVDLPRNKRVEIALTYIYGIGRPRAAMICKQVGIPSELRTEGLTDEHIAKIRSIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR +  +IKRLMDL C+RG+RHR+GLPVRGQ T +NARTRK
Sbjct: 61  EANFKVEGDLRREIGQSIKRLMDLNCFRGIRHRKGLPVRGQNTRSNARTRK 111


>gi|325972639|ref|YP_004248830.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy]
 gi|324027877|gb|ADY14636.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy]
          Length = 121

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+ +IC K  I P+  ++ L   ++  +R+ I
Sbjct: 1   MARIAGVDLPN-KAVKIALTYIYGIGRFSAVEICEKTNINPDTNINTLSSEDLAVLRKVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E++Y+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPV GQRT TNARTR
Sbjct: 60  EEEYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVHGQRTKTNARTR 109


>gi|295425629|ref|ZP_06818316.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664]
 gi|295064645|gb|EFG55566.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664]
          Length = 116

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVVALTYIYGIGEPTAKKICKDAGVSEDIRSKDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+GCYRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGCYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|291535453|emb|CBL08565.1| 30S ribosomal protein S13 [Roseburia intestinalis M50/1]
          Length = 122

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|229524555|ref|ZP_04413960.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338136|gb|EEO03153.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis
           VL426]
          Length = 118

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I   L I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|291619153|ref|YP_003521895.1| RpsM [Pantoea ananatis LMG 20103]
 gi|304399268|ref|ZP_07381134.1| 30S ribosomal protein S13 [Pantoea sp. aB]
 gi|308188334|ref|YP_003932465.1| 30S ribosomal protein S13 [Pantoea vagans C9-1]
 gi|291154183|gb|ADD78767.1| RpsM [Pantoea ananatis LMG 20103]
 gi|304353194|gb|EFM17575.1| 30S ribosomal protein S13 [Pantoea sp. aB]
 gi|308058844|gb|ADO11016.1| 30S ribosomal protein S13 [Pantoea vagans C9-1]
 gi|327395482|dbj|BAK12904.1| 30S ribosomal protein S13 RpsM [Pantoea ananatis AJ13355]
          Length = 118

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC    I    ++ +L E ++ Q+R A+
Sbjct: 1   MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICASTGIAENVKISELSEEQIDQLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|260655359|ref|ZP_05860847.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1]
 gi|260629807|gb|EEX48001.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1]
          Length = 123

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 79/109 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S+ I     + P+ RV  L E E  ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGVATSRKILETTGVNPDTRVKDLTEEEEQKLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
             ++ VEGDLRR   MNIKRL+D+GCYRGLRH++GLPVRGQRT TNART
Sbjct: 61  VNNHTVEGDLRRERTMNIKRLVDIGCYRGLRHKQGLPVRGQRTKTNART 109


>gi|325261518|ref|ZP_08128256.1| 30S ribosomal protein S13 [Clostridium sp. D5]
 gi|324032972|gb|EGB94249.1| 30S ribosomal protein S13 [Clostridium sp. D5]
          Length = 127

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 79/109 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ RV  L   EV +I + I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILTEAGVNPDTRVRDLTSEEVKKISEVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           EQ   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 66  EQSQTVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114


>gi|260772118|ref|ZP_05881035.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14]
 gi|260612985|gb|EEX38187.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14]
          Length = 118

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   + I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|73913588|gb|AAZ91709.1| 30S Ribosomal protein S13 [Corynebacterium stationis]
          Length = 122

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EASWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|229074196|ref|ZP_04207242.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18]
 gi|229094857|ref|ZP_04225862.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29]
 gi|229100934|ref|ZP_04231738.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28]
 gi|229113811|ref|ZP_04243246.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3]
 gi|228669682|gb|EEL25089.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3]
 gi|228682513|gb|EEL36586.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28]
 gi|228688600|gb|EEL42473.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29]
 gi|228708966|gb|EEL61093.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18]
          Length = 121

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|58699348|ref|ZP_00374121.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534134|gb|EAL58360.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 122

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K V  AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK
Sbjct: 61  RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111


>gi|226323037|ref|ZP_03798555.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758]
 gi|225208604|gb|EEG90958.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758]
          Length = 135

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + EV +I   I
Sbjct: 14  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAEAGVNPDTRCRDLTDDEVKKISAVI 73

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 74  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 124


>gi|291460742|ref|ZP_06600132.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416701|gb|EFE90420.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 122

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + EV  I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRSSADKILRESKVNPDTRVKDLTDDEVKAIANYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDLRR  A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  AENQMVEGDLRRETALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|218895270|ref|YP_002443681.1| ribosomal protein S13 [Bacillus cereus G9842]
 gi|228898888|ref|ZP_04063170.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222]
 gi|228905932|ref|ZP_04069829.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200]
 gi|228937438|ref|ZP_04100084.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228963235|ref|ZP_04124404.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228970324|ref|ZP_04130983.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976894|ref|ZP_04137306.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407]
 gi|226712692|sp|B7IT44|RS13_BACC2 RecName: Full=30S ribosomal protein S13
 gi|218543072|gb|ACK95466.1| ribosomal protein S13 [Bacillus cereus G9842]
 gi|228782864|gb|EEM31030.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407]
 gi|228789433|gb|EEM37353.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228796493|gb|EEM43932.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228822271|gb|EEM68253.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228853747|gb|EEM98507.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200]
 gi|228860788|gb|EEN05166.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222]
 gi|326937930|gb|AEA13826.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 121

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|239905881|ref|YP_002952620.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1]
 gi|259494674|sp|C4XLK0|RS13_DESMR RecName: Full=30S ribosomal protein S13
 gi|239795745|dbj|BAH74734.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1]
          Length = 123

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI GIG  ++  I     +   +    L   E   IR+ +
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIFGIGRTTALRILESTGVDWTKNSDALTSEETNNIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR +   IKRLMD+GCYRGLRHRRGLP RGQRTHTN+RTRK   +G +A+
Sbjct: 61  EANYKVEGDLRREITAGIKRLMDIGCYRGLRHRRGLPCRGQRTHTNSRTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257413860|ref|ZP_04744453.2| 30S ribosomal protein S13 [Roseburia intestinalis L1-82]
 gi|257202000|gb|EEV00285.1| 30S ribosomal protein S13 [Roseburia intestinalis L1-82]
 gi|291537906|emb|CBL11017.1| 30S ribosomal protein S13 [Roseburia intestinalis XB6B4]
          Length = 128

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +I   I
Sbjct: 7   MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 67  DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 117


>gi|302877824|ref|YP_003846388.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2]
 gi|302580613|gb|ADL54624.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2]
          Length = 121

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V AL  I+GIG   SQ IC    + P  ++  L ++EV ++R+ +
Sbjct: 1   MARIAGVNIPNHQHAVIALTAIYGIGRVRSQGICAAAGVTPSVKMKDLTDAEVEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPCRGQRTRTNARTRK 110


>gi|149926589|ref|ZP_01914849.1| ribosomal protein S13 [Limnobacter sp. MED105]
 gi|149824518|gb|EDM83734.1| ribosomal protein S13 [Limnobacter sp. MED105]
          Length = 121

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +  V  L  I GIG  +++ IC   +IP  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGINIPSHQHTVIGLTAIFGIGRSTAKKICAVTSIPESKKVKDLDDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TN+RTRK   + G+A 
Sbjct: 61  GK-YLTEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNSRTRKGPKRAGIAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|168334326|ref|ZP_02692513.1| 30S ribosomal protein S13 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 122

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  SS+ I   + I  + RV  L + +  +IR  I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIYGIGRPSSRKILEAVGIDFDTRVKDLTDEQADKIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+   VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  EKTMMVEGDLRREVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRK 111


>gi|90020628|ref|YP_526455.1| 30S ribosomal protein S13 [Saccharophagus degradans 2-40]
 gi|122996430|sp|Q21M36|RS13_SACD2 RecName: Full=30S ribosomal protein S13
 gi|89950228|gb|ABD80243.1| SSU ribosomal protein S13P [Saccharophagus degradans 2-40]
          Length = 118

 Score =  130 bits (326), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG   ++ IC+   +    ++  L E +V  IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVYGIGRTKAKQICSAAGVAESTKIGDLSEEQVDTIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRNLPVRGQRSKTNARTRK 110


>gi|283853176|ref|ZP_06370429.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B]
 gi|283571434|gb|EFC19441.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B]
          Length = 123

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  ++  I     +   +    L   E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIYGIGRTTALRILEVTGVDWTKNSDALSPEETNTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  NIKRLMD+GC+RGLRHRRGLP RGQRTHTNARTRK   +G +A+
Sbjct: 61  EANHKVEGDLRRDVTANIKRLMDIGCFRGLRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254458644|ref|ZP_05072068.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1]
 gi|207084410|gb|EDZ61698.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1]
          Length = 120

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KRV   L YI+GIG  +S+ I +   I   +RV +L E++V  I   I
Sbjct: 1   MARISGVDLPKKKRVEYGLTYIYGIGLHASRLILDATGIDYNKRVFELNEADVAAITAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK
Sbjct: 61  RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111


>gi|323483275|ref|ZP_08088665.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum
           WAL-14163]
 gi|323691226|ref|ZP_08105502.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673]
 gi|323403373|gb|EGA95681.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum
           WAL-14163]
 gi|323504745|gb|EGB20531.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673]
          Length = 122

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSTRILAEAGVNPDTRVKDLTDDEVKRIAGVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  AESQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111


>gi|146308901|ref|YP_001189366.1| 30S ribosomal protein S13 [Pseudomonas mendocina ymp]
 gi|330505185|ref|YP_004382054.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01]
 gi|166231916|sp|A4XZ68|RS13_PSEMY RecName: Full=30S ribosomal protein S13
 gi|145577102|gb|ABP86634.1| SSU ribosomal protein S13P [Pseudomonas mendocina ymp]
 gi|310941841|dbj|BAJ24274.1| 30S ribosomal protein S13 [Pseudomonas mendocina]
 gi|328919471|gb|AEB60302.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01]
          Length = 118

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAATGVNPAAKIKDLTDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|225571579|ref|ZP_03780575.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM
           15053]
 gi|225159656|gb|EEG72275.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM
           15053]
          Length = 170

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I ++  + P+ R   L + +V +I   I
Sbjct: 49  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILSEAGVSPDIRCRDLTDEDVKKISAVI 108

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 109 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 159


>gi|292489827|ref|YP_003532717.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430]
 gi|292900869|ref|YP_003540238.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC 49946]
 gi|291200717|emb|CBJ47850.1| 30S ribosomal subunit protein S13 [Erwinia amylovora ATCC 49946]
 gi|291555264|emb|CBA23545.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430]
 gi|312174009|emb|CBX82262.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC BAA-2158]
          Length = 118

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|216263668|ref|ZP_03435663.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1]
 gi|215980512|gb|EEC21333.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1]
          Length = 125

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK  I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|296119327|ref|ZP_06837895.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967719|gb|EFG80976.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306]
          Length = 122

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EASFKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|295401895|ref|ZP_06811858.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109286|ref|YP_003987602.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1]
 gi|294976025|gb|EFG51640.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214387|gb|ADP72991.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1]
          Length = 121

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  SR-LKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|153812442|ref|ZP_01965110.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174]
 gi|149831367|gb|EDM86455.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174]
          Length = 194

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + +V +I   I
Sbjct: 73  MARIAGVDLPRDKRIEIGLTYIYGIGRTSADKILAQAGVNPDIRVRDLTDDDVKKISAVI 132

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 133 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 183


>gi|300721388|ref|YP_003710659.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC
           19061]
 gi|297627876|emb|CBJ88422.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC
           19061]
          Length = 118

 Score =  130 bits (326), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAENVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|310941691|dbj|BAJ24199.1| 30S ribosomal protein S13 [Pseudomonas alcaligenes]
          Length = 118

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-LTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|299820979|ref|ZP_07052868.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601]
 gi|299818000|gb|EFI85235.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601]
          Length = 121

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG  +++ +  +  + PE R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKTTAEKVLAEAGVSPETRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261417632|ref|YP_003251314.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61]
 gi|319765290|ref|YP_004130791.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52]
 gi|261374089|gb|ACX76832.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61]
 gi|317110156|gb|ADU92648.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52]
          Length = 121

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  -GCLKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|226942800|ref|YP_002797873.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ]
 gi|259494667|sp|C1DKN5|RS13_AZOVD RecName: Full=30S ribosomal protein S13
 gi|226717727|gb|ACO76898.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ]
          Length = 118

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQAICAATGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-LTTEGDLRREVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|15925216|ref|NP_372750.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927806|ref|NP_375339.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283874|ref|NP_646962.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2]
 gi|49484442|ref|YP_041666.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487008|ref|YP_044229.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650810|ref|YP_187025.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus COL]
 gi|82751816|ref|YP_417557.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122]
 gi|87159948|ref|YP_494815.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196138|ref|YP_500955.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268666|ref|YP_001247609.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH9]
 gi|150394731|ref|YP_001317406.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1]
 gi|151222340|ref|YP_001333162.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980541|ref|YP_001442800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3]
 gi|161510430|ref|YP_001576089.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140172|ref|ZP_03564665.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253316987|ref|ZP_04840200.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729892|ref|ZP_04864057.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734365|ref|ZP_04868530.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255007006|ref|ZP_05145607.2| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257423711|ref|ZP_05600140.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257426389|ref|ZP_05602791.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429029|ref|ZP_05605416.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257431675|ref|ZP_05608038.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434635|ref|ZP_05610686.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M876]
 gi|257794572|ref|ZP_05643551.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781]
 gi|258408826|ref|ZP_05681110.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763]
 gi|258422425|ref|ZP_05685337.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719]
 gi|258422673|ref|ZP_05685578.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635]
 gi|258439813|ref|ZP_05690559.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299]
 gi|258442631|ref|ZP_05691191.1| ribosomal protein S13 [Staphylococcus aureus A8115]
 gi|258446671|ref|ZP_05694826.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300]
 gi|258450211|ref|ZP_05698303.1| ribosomal protein S13 [Staphylococcus aureus A6224]
 gi|258450778|ref|ZP_05698837.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948]
 gi|258455417|ref|ZP_05703377.1| ribosomal protein S13 [Staphylococcus aureus A5937]
 gi|269203859|ref|YP_003283128.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893665|ref|ZP_06301897.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117]
 gi|282902129|ref|ZP_06310022.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906569|ref|ZP_06314417.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909539|ref|ZP_06317350.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911787|ref|ZP_06319583.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282915075|ref|ZP_06322852.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917571|ref|ZP_06325323.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920801|ref|ZP_06328519.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282922095|ref|ZP_06329791.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765]
 gi|282925706|ref|ZP_06333354.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282926772|ref|ZP_06334399.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102]
 gi|283767318|ref|ZP_06340233.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19]
 gi|283959004|ref|ZP_06376445.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025252|ref|ZP_06379650.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 132]
 gi|293497479|ref|ZP_06665333.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511054|ref|ZP_06669751.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293549660|ref|ZP_06672332.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848759|ref|ZP_06789504.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754]
 gi|295404902|ref|ZP_06814715.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819]
 gi|295428809|ref|ZP_06821433.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275983|ref|ZP_06858490.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MR1]
 gi|297209961|ref|ZP_06926357.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297243960|ref|ZP_06927850.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796]
 gi|297589705|ref|ZP_06948346.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8]
 gi|300910973|ref|ZP_07128423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304379410|ref|ZP_07362145.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039351|sp|P66388|RS13_STAAN RecName: Full=30S ribosomal protein S13
 gi|54039352|sp|P66389|RS13_STAAW RecName: Full=30S ribosomal protein S13
 gi|54042123|sp|P66387|RS13_STAAM RecName: Full=30S ribosomal protein S13
 gi|56749504|sp|Q6G795|RS13_STAAS RecName: Full=30S ribosomal protein S13
 gi|56749551|sp|Q6GEK7|RS13_STAAR RecName: Full=30S ribosomal protein S13
 gi|81693973|sp|Q5HDY2|RS13_STAAC RecName: Full=30S ribosomal protein S13
 gi|91207727|sp|Q2YYM0|RS13_STAAB RecName: Full=30S ribosomal protein S13
 gi|122538866|sp|Q2FW30|RS13_STAA8 RecName: Full=30S ribosomal protein S13
 gi|123484808|sp|Q2FER3|RS13_STAA3 RecName: Full=30S ribosomal protein S13
 gi|166231927|sp|A7X5C7|RS13_STAA1 RecName: Full=30S ribosomal protein S13
 gi|172049007|sp|A6QJ68|RS13_STAAE RecName: Full=30S ribosomal protein S13
 gi|189044299|sp|A6U3V1|RS13_STAA2 RecName: Full=30S ribosomal protein S13
 gi|189044300|sp|A5IV10|RS13_STAA9 RecName: Full=30S ribosomal protein S13
 gi|189044301|sp|A8Z333|RS13_STAAT RecName: Full=30S ribosomal protein S13
 gi|13702026|dbj|BAB43318.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247999|dbj|BAB58388.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205316|dbj|BAB96010.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242571|emb|CAG41292.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245451|emb|CAG43928.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284996|gb|AAW37090.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus COL]
 gi|82657347|emb|CAI81788.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122]
 gi|87125922|gb|ABD20436.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203696|gb|ABD31506.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741735|gb|ABQ50033.1| SSU ribosomal protein S13P [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947183|gb|ABR53119.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1]
 gi|150375140|dbj|BAF68400.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722676|dbj|BAF79093.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369239|gb|ABX30210.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253726339|gb|EES95068.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727682|gb|EES96411.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257272729|gb|EEV04831.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276020|gb|EEV07471.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279510|gb|EEV10097.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282554|gb|EEV12686.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285231|gb|EEV15347.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M876]
 gi|257788544|gb|EEV26884.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781]
 gi|257840509|gb|EEV64969.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763]
 gi|257841856|gb|EEV66293.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719]
 gi|257847084|gb|EEV71093.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635]
 gi|257847589|gb|EEV71591.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299]
 gi|257851752|gb|EEV75686.1| ribosomal protein S13 [Staphylococcus aureus A8115]
 gi|257854739|gb|EEV77687.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300]
 gi|257856303|gb|EEV79212.1| ribosomal protein S13 [Staphylococcus aureus A6224]
 gi|257861561|gb|EEV84363.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948]
 gi|257862628|gb|EEV85396.1| ribosomal protein S13 [Staphylococcus aureus A5937]
 gi|262076149|gb|ACY12122.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941815|emb|CBI50225.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282312535|gb|EFB42939.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282315216|gb|EFB45600.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318533|gb|EFB48891.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320796|gb|EFB51130.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282323483|gb|EFB53799.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326518|gb|EFB56820.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329468|gb|EFB58989.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591223|gb|EFB96296.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102]
 gi|282593563|gb|EFB98556.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765]
 gi|282596588|gb|EFC01547.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282763723|gb|EFC03851.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117]
 gi|283461197|gb|EFC08281.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19]
 gi|283471448|emb|CAQ50659.1| ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283788596|gb|EFC27423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817888|gb|ADC38375.1| 30S ribosomal protein S13 [Staphylococcus aureus 04-02981]
 gi|290918707|gb|EFD95783.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096410|gb|EFE26668.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466041|gb|EFF08570.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M809]
 gi|294824138|gb|EFG40562.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754]
 gi|294969847|gb|EFG45865.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819]
 gi|295127158|gb|EFG56800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296885634|gb|EFH24571.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178738|gb|EFH37983.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796]
 gi|297578216|gb|EFH96929.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8]
 gi|298695483|gb|ADI98705.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887953|gb|EFK83148.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333862|gb|ADL24055.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302752099|gb|ADL66276.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341942|gb|EFM07846.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437363|gb|ADQ76434.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312830575|emb|CBX35417.1| 30S ribosomal protein S13 (BS14) [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129694|gb|EFT85685.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193478|gb|EFU23874.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198244|gb|EFU28575.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140236|gb|EFW32095.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143506|gb|EFW35287.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440094|gb|EGA97809.1| 30S ribosomal protein S13 [Staphylococcus aureus O11]
 gi|323442768|gb|EGB00394.1| 30S ribosomal protein S13 [Staphylococcus aureus O46]
 gi|329314909|gb|AEB89322.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723637|gb|EGG60166.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329730351|gb|EGG66741.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21193]
 gi|329732010|gb|EGG68365.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21189]
          Length = 121

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DG-YKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|326792581|ref|YP_004310402.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
 gi|326543345|gb|ADZ85204.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
          Length = 123

 Score =  129 bits (325), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 84/112 (75%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI GIG  +S+ I  +  I  + R+  L E +V +IR+ I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIFGIGRPTSRQILTEAGIDFDTRIKDLTEEQVSKIRELI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+    VEGDLRR +A+NIKRLM++GCYRG+RHRRGLPVRGQ+T TNARTRK
Sbjct: 61  EKLGIIVEGDLRREIALNIKRLMEIGCYRGIRHRRGLPVRGQKTKTNARTRK 112


>gi|229170986|ref|ZP_04298587.1| 30S ribosomal protein S13 [Bacillus cereus MM3]
 gi|228612526|gb|EEK69747.1| 30S ribosomal protein S13 [Bacillus cereus MM3]
          Length = 121

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|307720210|ref|YP_003891350.1| 30S ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294]
 gi|306978303|gb|ADN08338.1| SSU ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294]
          Length = 120

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L YI+GIG  +++ I +   I   +RV +L E +V  I + I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYIYGIGLHTARQILDATGIDYNKRVFELNEEDVAAITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK
Sbjct: 61  RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111


>gi|295396441|ref|ZP_06806603.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970743|gb|EFG46656.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 122

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G   +     +  + P+ RV  L + E++Q+R  I
Sbjct: 1   MARLAGVDLPREKRVEVALTYIYGVGRTRASQTLTETGVNPDTRVKDLTDDELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTFKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|229015536|ref|ZP_04172533.1| 30S ribosomal protein S13 [Bacillus cereus AH1273]
 gi|229021746|ref|ZP_04178327.1| 30S ribosomal protein S13 [Bacillus cereus AH1272]
 gi|229027983|ref|ZP_04184136.1| 30S ribosomal protein S13 [Bacillus cereus AH1271]
 gi|229159308|ref|ZP_04287332.1| 30S ribosomal protein S13 [Bacillus cereus R309803]
 gi|228624200|gb|EEK81002.1| 30S ribosomal protein S13 [Bacillus cereus R309803]
 gi|228733371|gb|EEL84200.1| 30S ribosomal protein S13 [Bacillus cereus AH1271]
 gi|228739555|gb|EEL89970.1| 30S ribosomal protein S13 [Bacillus cereus AH1272]
 gi|228745759|gb|EEL95764.1| 30S ribosomal protein S13 [Bacillus cereus AH1273]
          Length = 121

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|301168434|emb|CBW28024.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ]
          Length = 127

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 82/121 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IPR K V  AL  I+G+G K ++++  K  I   +  + L E E   IR  +
Sbjct: 1   MARILGVDIPRNKVVTVALRSIYGVGPKVAEEVLTKAGIDLNKNSNDLTEEEANNIRLLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR + +NIKRL DLGCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGEYTVEGDLRRQIGLNIKRLKDLGCYRGIRHRKGLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|150020870|ref|YP_001306224.1| 30S ribosomal protein S13 [Thermosipho melanesiensis BI429]
 gi|166231928|sp|A6LLN8|RS13_THEM4 RecName: Full=30S ribosomal protein S13
 gi|149793391|gb|ABR30839.1| ribosomal protein S13 [Thermosipho melanesiensis BI429]
          Length = 122

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL YI+GIG   ++ IC    I P +RV +L + E+ +I   I
Sbjct: 1   MARIVGVEIPNDKKVEIALTYIYGIGKTRAKQICEATNIDPNKRVRELGDEEISKIATFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+Y+VEG+LR  V  NIKRL+D+GCYRGLRH+ GLPVRGQ+T +NARTRK
Sbjct: 61  QQNYKVEGELRTEVMQNIKRLIDIGCYRGLRHKLGLPVRGQKTKSNARTRK 111


>gi|284006141|emb|CBA71383.1| 30S ribosomal protein S13 [Arsenophonus nasoniae]
          Length = 118

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQSICAASGIAEHVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YIVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|239918175|ref|YP_002957733.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
 gi|259494685|sp|C5CC38|RS13_MICLC RecName: Full=30S ribosomal protein S13
 gi|239839382|gb|ACS31179.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
          Length = 122

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++      I P  RV  L   +++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|320108371|ref|YP_004183961.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4]
 gi|319926892|gb|ADV83967.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4]
          Length = 126

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+   AL YI GIG   +  I  K  I P R++  L E E+ +IRQ I
Sbjct: 1   MARIAGVDLPNNKQAKIALTYIFGIGDPRALSILKKADIDPIRKMQTLDEDELNKIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +  +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EAEGGIEGDLRKDISLNIKRLIEIQSYRGLRHRRNLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260886900|ref|ZP_05898163.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|330839302|ref|YP_004413882.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|260863499|gb|EEX77999.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|329747066|gb|AEC00423.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
          Length = 124

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +SQ +     + P+ R   L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTTSQKLLKLAGVNPDTRTRDLTEDEVVKLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++  VEGDLRR   M IKRL+D+GCYRG RHR GLPVRGQ T  NARTRK
Sbjct: 61  DKEAIVEGDLRRERQMAIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRK 111


>gi|254483422|ref|ZP_05096651.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148]
 gi|214036296|gb|EEB76974.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148]
          Length = 118

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  +++++C    +    R+ +L E+E+  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAKELCAATGVTESTRIGELSETEMDALRGKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +  VEGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  -AEMMVEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRK 110


>gi|167759836|ref|ZP_02431963.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704]
 gi|167662455|gb|EDS06585.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704]
          Length = 122

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDEDVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|291518022|emb|CBK73243.1| 30S ribosomal protein S13 [Butyrivibrio fibrisolvens 16/4]
          Length = 122

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  +     + P  RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGRVSSNKVLEAAGVDPNTRVKDLTDEEVKKISTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEG+LRR VA++IKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DETLTVEGNLRREVALDIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|192360555|ref|YP_001981230.1| 30S ribosomal protein S13 [Cellvibrio japonicus Ueda107]
 gi|226712710|sp|B3PK59|RS13_CELJU RecName: Full=30S ribosomal protein S13
 gi|190686720|gb|ACE84398.1| ribosomal protein S13p/S18e [Cellvibrio japonicus Ueda107]
          Length = 118

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG  +++ IC    I  + ++  L E ++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVYGIGRTTAKQICAATGIAEDTKIGTLSEEQMDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-HTVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRK 110


>gi|254468398|ref|ZP_05081804.1| ribosomal protein S13p/S18e [beta proteobacterium KB13]
 gi|207087208|gb|EDZ64491.1| ribosomal protein S13p/S18e [beta proteobacterium KB13]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K    AL  I+GIG  ++Q+IC  + +    ++  L ++ V ++R  I
Sbjct: 1   MARIAGVNVPDNKHADIALTAIYGIGRTTAQNICKSVGVDAATKIKDLDDAAVEKLRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + YQ+EGDLRR V MNIKRLMDL CYRG RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YQIEGDLRREVTMNIKRLMDLNCYRGQRHRRGLPVRGQRTKTNARTRK 110


>gi|169630852|ref|YP_001704501.1| 30S ribosomal protein S13 [Mycobacterium abscessus ATCC 19977]
 gi|226712765|sp|B1MGA2|RS13_MYCA9 RecName: Full=30S ribosomal protein S13
 gi|169242819|emb|CAM63847.1| 30S ribosomal protein S13 [Mycobacterium abscessus]
          Length = 124

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S++I     I PE+R   L + +V Q+R+ I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSKEILAATGISPEQRSKDLTDDQVTQLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|291521875|emb|CBK80168.1| 30S ribosomal protein S13 [Coprococcus catus GD/7]
          Length = 123

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 84/112 (75%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG  +S  +  +  + P+ RV  L + EV +IR AI
Sbjct: 1   MARISGVDLPRDKRIEIGLTYVYGIGRATSNRLLKEAGVNPDTRVRDLTDEEVGKIRDAI 60

Query: 61  EQDY-QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + D   +EGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  DADSILIEGDLRREIAINIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 112


>gi|269104034|ref|ZP_06156731.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163932|gb|EEZ42428.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|225376435|ref|ZP_03753656.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
           16841]
 gi|225211811|gb|EEG94165.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
           16841]
          Length = 128

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P  R   L + EV +I + I
Sbjct: 7   MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILAEANVDPNTRCRDLTDDEVKRISEVI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 67  DNTQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 117


>gi|302388062|ref|YP_003823884.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1]
 gi|302198690|gb|ADL06261.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1]
          Length = 122

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  GDSQIVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111


>gi|56961957|ref|YP_173679.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16]
 gi|81367460|sp|Q5WLN7|RS13_BACSK RecName: Full=30S ribosomal protein S13
 gi|56908191|dbj|BAD62718.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16]
          Length = 121

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L Y+ GIG  ++  I     +    RV  L E E+ +IR+A+
Sbjct: 1   MARVAGVDIPRDKRVVISLTYVFGIGKSTAAKILETAGVDENTRVRDLTEEELGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  YQVEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  E-GYQVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|257064665|ref|YP_003144337.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476]
 gi|256792318|gb|ACV22988.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476]
          Length = 123

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+   L YI+GIG  +++ I  +  + P+ RV  + E ++ +IR  I
Sbjct: 1   MPRLFGVDLPRDKRIETGLTYIYGIGNTTAKKIIAETGVDPDVRVRDISEEDLQKIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +  VEGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DANLTVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRK 111


>gi|254422356|ref|ZP_05036074.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335]
 gi|196189845|gb|EDX84809.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335]
          Length = 126

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 76/101 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+G+G   SQ+I  K  + P  RV  L +++VI++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGVGLSRSQEILEKTGVDPNIRVKDLADADVIKLRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E DY +EGDLRR V MNIKRLMD+GCYRG RHR GLPVRGQ
Sbjct: 61  EGDYLIEGDLRRQVNMNIKRLMDIGCYRGRRHRMGLPVRGQ 101


>gi|197294606|ref|YP_001799147.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense]
 gi|226712773|sp|B1VAC3|RS13_PHYAS RecName: Full=30S ribosomal protein S13
 gi|171853933|emb|CAM11896.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense]
          Length = 121

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K SQ I N+L I  + RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGKKLSQKILNELNISHDIRVKNLTEQQLSSLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K
Sbjct: 61  TK-YSVEGDLRREVTLNIKRLMEIGVYRGLRHRKGLPVRGQKTRNNAHTVK 110


>gi|242237881|ref|YP_002986062.1| 30S ribosomal protein S13 [Dickeya dadantii Ech703]
 gi|242129938|gb|ACS84240.1| ribosomal protein S13 [Dickeya dadantii Ech703]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ IC    I  + ++ +L E ++  +R+ +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAICAAAGIAEDVKISELSEEQIETLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|229823513|ref|ZP_04449582.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271]
 gi|229786957|gb|EEP23071.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271]
          Length = 120

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG K++Q +  +  +  + RV  L   E+ +IR+ I
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGLKTAQQVLKQANVSEDTRVKDLSNDELDRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR +++NIKRL ++G YRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  D-GLKVEGDLRREISLNIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|298243944|ref|ZP_06967751.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963]
 gi|297556998|gb|EFH90862.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963]
          Length = 126

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 78/101 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +LCYI+GIG  +SQ I  K  I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDIPREKRVEISLCYIYGIGLTTSQKILEKTRINPDTRVKDLTEEEVNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           +++++VEGDLRR +  NIKRL+D+GCYRGLRHRR LPV GQ
Sbjct: 61  DREHKVEGDLRREIQTNIKRLIDIGCYRGLRHRRNLPVHGQ 101


>gi|118595313|ref|ZP_01552660.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181]
 gi|118441091|gb|EAV47718.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K    AL  I GIG  ++Q IC  + +    ++  L ES V +IR  I
Sbjct: 1   MARIAGVNVPDNKHAEIALTAIFGIGKVTAQKICAAVGVSQSTKIKDLDESAVEKIRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  EK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|262203543|ref|YP_003274751.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247]
 gi|262086890|gb|ACY22858.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247]
          Length = 122

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G  +S++I     + P+ R   L +++V ++R+ I
Sbjct: 1   MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILEGTGLSPDLRAKDLTDADVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|237806897|ref|YP_002891337.1| 30S ribosomal protein S13 [Tolumonas auensis DSM 9187]
 gi|259494693|sp|C4L7V2|RS13_TOLAT RecName: Full=30S ribosomal protein S13
 gi|237499158|gb|ACQ91751.1| ribosomal protein S13 [Tolumonas auensis DSM 9187]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   ++ IC    I  + +V  L E+++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGDTRAKSICAAAGIAEDVKVKDLDEAQIEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|42520509|ref|NP_966424.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652512|sp|Q73HA7|RS13_WOLPM RecName: Full=30S ribosomal protein S13
 gi|42410248|gb|AAS14358.1| ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 122

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K V  AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISGFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK
Sbjct: 61  RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 111


>gi|188535256|ref|YP_001909053.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99]
 gi|259909978|ref|YP_002650334.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96]
 gi|226712736|sp|B2VK74|RS13_ERWT9 RecName: Full=30S ribosomal protein S13
 gi|188030298|emb|CAO98187.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99]
 gi|224965600|emb|CAX57132.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96]
 gi|283480076|emb|CAY75992.1| 30S ribosomal protein S13 [Erwinia pyrifoliae DSM 12163]
 gi|310765576|gb|ADP10526.1| 30S ribosomal protein S13 [Erwinia sp. Ejp617]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|126654304|ref|ZP_01726074.1| 30S ribosomal protein S13 [Bacillus sp. B14905]
 gi|169830007|ref|YP_001700165.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41]
 gi|299541956|ref|ZP_07052279.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1]
 gi|226712758|sp|B1HMV7|RS13_LYSSC RecName: Full=30S ribosomal protein S13
 gi|126589233|gb|EAZ83396.1| 30S ribosomal protein S13 [Bacillus sp. B14905]
 gi|168994495|gb|ACA42035.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41]
 gi|298725694|gb|EFI66335.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1]
          Length = 121

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +     I  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKTTAQKVLADAGISEDTRVRDLTEDELNKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y++EGDLRR  ++NIKRLM++G +RG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-YKLEGDLRRETSLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|170723884|ref|YP_001751572.1| 30S ribosomal protein S13 [Pseudomonas putida W619]
 gi|226712779|sp|B1JAJ0|RS13_PSEPW RecName: Full=30S ribosomal protein S13
 gi|169761887|gb|ACA75203.1| ribosomal protein S13 [Pseudomonas putida W619]
 gi|310941010|dbj|BAJ24379.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941040|dbj|BAJ24394.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|296394893|ref|YP_003659777.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
 gi|296182040|gb|ADG98946.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
          Length = 124

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     + P+ R   L ++ V Q+R+ I
Sbjct: 1   MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDANVAQLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|224534712|ref|ZP_03675284.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S]
 gi|224513960|gb|EEF84282.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S]
          Length = 125

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CN+ +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLRIALTSIYGIGRTRALEVCNRASISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|170728987|ref|YP_001763013.1| 30S ribosomal protein S13 [Shewanella woodyi ATCC 51908]
 gi|226712786|sp|B1KMW1|RS13_SHEWM RecName: Full=30S ribosomal protein S13
 gi|169814334|gb|ACA88918.1| ribosomal protein S13 [Shewanella woodyi ATCC 51908]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   ++  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTGIFGIGRTRARAICAATSVAEDAKIKELSEAQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|325267154|ref|ZP_08133822.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394]
 gi|324981392|gb|EGC17036.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394]
          Length = 120

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   +++IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKNICEVAGIAPATKVKDLDESQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V MNIKRL+D+GCYRG+RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMNIKRLIDMGCYRGMRHRRGLPCRGQRTRTNARTRK 110


>gi|152980690|ref|YP_001355078.1| 30S ribosomal protein S13 [Janthinobacterium sp. Marseille]
 gi|158706240|sp|A6T3I1|RS13_JANMA RecName: Full=30S ribosomal protein S13
 gi|151280767|gb|ABR89177.1| small subunit ribosomal protein S13 [Janthinobacterium sp.
           Marseille]
          Length = 121

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   SQ IC+   +P  ++V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNVPNHQHTVIGLTAIYGIGRPRSQKICDTAGVPTTKKVKDLDDNELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK
Sbjct: 61  AK-FIVEGDLRRELSMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRK 110


>gi|294142911|ref|YP_003558889.1| 30S ribosomal protein S13 [Shewanella violacea DSS12]
 gi|22257036|sp|Q9S0R1|RS13_SHEVD RecName: Full=30S ribosomal protein S13
 gi|5913929|dbj|BAA84522.1| ribosomal protein S13 [Shewanella violacea]
 gi|293329380|dbj|BAJ04111.1| ribosomal protein S13 [Shewanella violacea DSS12]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDQKHTVIALTGIFGIGRTRARAICAATSIAEDAKIKELSEAQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|294789216|ref|ZP_06754455.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453]
 gi|294482957|gb|EFG30645.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453]
          Length = 120

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKSICEAAGIAPTTKVKDLNESQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|52426081|ref|YP_089218.1| 30S ribosomal protein S13 [Mannheimia succiniciproducens MBEL55E]
 gi|81386597|sp|Q65QX7|RS13_MANSM RecName: Full=30S ribosomal protein S13
 gi|52308133|gb|AAU38633.1| RpsM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 118

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRSQAICAAAGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|288554751|ref|YP_003426686.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4]
 gi|288545911|gb|ADC49794.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L YI+G+G   S +I  +  +  + RV  L E E+ +IR+A+
Sbjct: 1   MARVAGVDIPRDKRVVVSLTYIYGVGKTKSSEILAEAGVSEDTRVRDLTEEELGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  + VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  EA-HTVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|284042828|ref|YP_003393168.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684]
 gi|283947049|gb|ADB49793.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684]
          Length = 126

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  KRV   L YI+GIG   S ++  K+ I P+  V  L E EV ++R  I
Sbjct: 1   MARIAGINIPLNKRVEIGLTYIYGIGRSRSNELLAKVGISPDTYVRDLTEDEVGKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR  + N+KRLM++GCYRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  DS-LTVEGDLRRERSQNVKRLMEIGCYRGLRHRRGLPVRGQKTKTNARTRK 110


>gi|15603258|ref|NP_246332.1| 30S ribosomal protein S13 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|32363393|sp|Q9CL51|RS13_PASMU RecName: Full=30S ribosomal protein S13
 gi|12721768|gb|AAK03477.1| RpS13 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRAQAICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|222150469|ref|YP_002559622.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402]
 gi|254811153|sp|B9E9L5|RS13_MACCJ RecName: Full=30S ribosomal protein S13
 gi|222119591|dbj|BAH16926.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  S+Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRVVIALTYIYGIGRTSAQKILAEANVSEDTRVRDLTEDELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR V +NIKRLM++  YRG+RHRRGLP RGQ T  NARTRK
Sbjct: 61  D-GYKVEGDLRREVNLNIKRLMEIASYRGIRHRRGLPTRGQNTKNNARTRK 110


>gi|317050552|ref|YP_004111668.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
 gi|316945636|gb|ADU65112.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
          Length = 120

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P+ KRV   L YI+G+G   S+ I   ++I  +++V +L E EV  +R+A+
Sbjct: 1   MARVAGVDLPKNKRVEIGLTYIYGVGRSRSRQILANVSIDMDKKVGELSEDEVNTLRKAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ Y VEGDLR+ V+++IKRL DLGCYRGLRHR GLPVRGQ T  N+RTRK
Sbjct: 61  EE-YDVEGDLRKNVSLDIKRLKDLGCYRGLRHRSGLPVRGQNTKNNSRTRK 110


>gi|229009644|ref|ZP_04166870.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048]
 gi|229131143|ref|ZP_04260055.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196]
 gi|229165123|ref|ZP_04292918.1| 30S ribosomal protein S13 [Bacillus cereus AH621]
 gi|228618386|gb|EEK75416.1| 30S ribosomal protein S13 [Bacillus cereus AH621]
 gi|228652356|gb|EEL08281.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196]
 gi|228751666|gb|EEM01466.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLSEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|300718683|ref|YP_003743486.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661]
 gi|299064519|emb|CAX61639.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICATTGIAENVKISELSEEQIDILRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|153952886|ref|YP_001393651.1| RpsM [Clostridium kluyveri DSM 555]
 gi|219853551|ref|YP_002470673.1| hypothetical protein CKR_0208 [Clostridium kluyveri NBRC 12016]
 gi|189040497|sp|A5N4S2|RS13_CLOK5 RecName: Full=30S ribosomal protein S13
 gi|254811142|sp|B9DYD4|RS13_CLOK1 RecName: Full=30S ribosomal protein S13
 gi|146345767|gb|EDK32303.1| RpsM [Clostridium kluyveri DSM 555]
 gi|219567275|dbj|BAH05259.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 123

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  +SQ I  +  +  + RV  L E EV  +R  I
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLPTSQKILKETGVNSDTRVKDLTEEEVNLLRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ ++EGDLRR VA+NIKRL+++G YRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  -KNLKIEGDLRREVALNIKRLIEIGSYRGIRHRKGLPVRGQKTKTNARTRK 110


>gi|88812735|ref|ZP_01127981.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231]
 gi|88789973|gb|EAR21094.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +  IC    I PE ++ +L E+E+  +R  +
Sbjct: 1   MARIAGVNIPANKHTAIALTSIYGIGRSCAAAICRATGIAPECKIQELTEAELEHLRGEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR VAM+IKRLMDLGCYRG+RHRRGL VRGQRT TNARTRK
Sbjct: 61  GK-YVIEGDLRRQVAMDIKRLMDLGCYRGIRHRRGLSVRGQRTRTNARTRK 110


>gi|163938143|ref|YP_001643027.1| 30S ribosomal protein S13 [Bacillus weihenstephanensis KBAB4]
 gi|229053981|ref|ZP_04195415.1| 30S ribosomal protein S13 [Bacillus cereus AH603]
 gi|226712695|sp|A9VPA2|RS13_BACWK RecName: Full=30S ribosomal protein S13
 gi|163860340|gb|ABY41399.1| ribosomal protein S13 [Bacillus weihenstephanensis KBAB4]
 gi|228721399|gb|EEL72920.1| 30S ribosomal protein S13 [Bacillus cereus AH603]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKIITEAGISSETRVRDLSEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|304438882|ref|ZP_07398805.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372548|gb|EFM26131.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 120

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG   S +I     + P+ RV  L E+EV +IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIFGIGRSRSNEILKNAEVNPDTRVKDLTEAEVARIRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR VAMNIKRL ++ CYRG+RH RGLPVRGQ T  NARTRK
Sbjct: 61  DK-YHVEGDLRRDVAMNIKRLREIKCYRGIRHMRGLPVRGQNTKNNARTRK 110


>gi|52783997|ref|YP_089826.1| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|163119191|ref|YP_077426.2| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|319649090|ref|ZP_08003298.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2]
 gi|81386392|sp|Q65P81|RS13_BACLD RecName: Full=30S ribosomal protein S13
 gi|52346499|gb|AAU39133.1| RpsM [Bacillus licheniformis ATCC 14580]
 gi|145902697|gb|AAU21788.2| ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|317388790|gb|EFV69609.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q I  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQILKEAGVSEDTRVRDLTEEELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|89076302|ref|ZP_01162643.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34]
 gi|90581700|ref|ZP_01237488.1| 30S ribosomal protein S13 [Vibrio angustum S14]
 gi|89048006|gb|EAR53595.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34]
 gi|90437115|gb|EAS62318.1| 30S ribosomal protein S13 [Vibrio angustum S14]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|227494570|ref|ZP_03924886.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
 gi|226832304|gb|EEH64687.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
          Length = 122

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E +++++R+ I
Sbjct: 1   MARIAGVDLPREKRMEIALTYIYGVGRTRAAETLEATGVSPDLRVKDATEEDLVKLREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|291166854|gb|EFE28900.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG  +S  I     I P+ R+  L E EV  +R+AI
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIFGIGRPTSNKILKDTGINPDTRIKDLTEEEVNTLRKAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK
Sbjct: 61  D-NYLVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRK 110


>gi|311029075|ref|ZP_07707165.1| 30S ribosomal protein S13 [Bacillus sp. m3-13]
          Length = 121

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L Y+ GIG  +++ +  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDVPRDKRVVISLTYVFGIGRSTAEKVLAEAGVSEDTRVRDLTEEELGKIRDVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-IKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|91791561|ref|YP_561212.1| 30S ribosomal protein S13 [Shewanella denitrificans OS217]
 gi|122969076|sp|Q12ST7|RS13_SHEDO RecName: Full=30S ribosomal protein S13
 gi|91713563|gb|ABE53489.1| SSU ribosomal protein S13P [Shewanella denitrificans OS217]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTAIAETAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YSVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|91205855|ref|YP_538210.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C]
 gi|157826785|ref|YP_001495849.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389]
 gi|122425381|sp|Q1RHP3|RS13_RICBR RecName: Full=30S ribosomal protein S13
 gi|166231920|sp|A8GVD5|RS13_RICB8 RecName: Full=30S ribosomal protein S13
 gi|91069399|gb|ABE05121.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C]
 gi|157802089|gb|ABV78812.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389]
          Length = 125

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   ++ IC K  I  +++V  L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR V +NIK+  D+  Y+GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRK 111


>gi|325104844|ref|YP_004274498.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145]
 gi|324973692|gb|ADY52676.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145]
          Length = 125

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI+GIG K++Q+I  +  I  +++V +  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIYGIGRKTAQNILTQAGISFDKKVQEWTDEELTAIRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEG LR  V +NIKRLMD+GCYRGLRHR+GLP+RGQRT  N+RTRK
Sbjct: 61  SESIKVEGQLRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111


>gi|160894731|ref|ZP_02075506.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50]
 gi|156863665|gb|EDO57096.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50]
          Length = 122

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG  SSQ I  +  + P+ R + L + EV +I + I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYVYGIGLASSQRILKEANVNPDTRCNDLTDDEVRRISEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR VA+NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  NATQTVEGDLRREVALNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 111


>gi|94500970|ref|ZP_01307495.1| ribosomal protein S13 [Oceanobacter sp. RED65]
 gi|94426910|gb|EAT11893.1| ribosomal protein S13 [Oceanobacter sp. RED65]
          Length = 118

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++G+G  +++ IC  + I    ++  L + ++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVYGVGLPTAKQICKAVGIEESTKISDLSDEKLDELRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVSMNIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 [Oribacterium sinus F0268]
 gi|227842378|gb|EEJ52603.1| ribosomal protein S13 [Oribacterium sinus F0268]
          Length = 122

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + EV  +   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAETGVNPDTRVKDLTDDEVKTLATYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  AEHQMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 111


>gi|229592881|ref|YP_002875000.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25]
 gi|259494687|sp|C3K2V4|RS13_PSEFS RecName: Full=30S ribosomal protein S13
 gi|229364747|emb|CAY52728.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25]
 gi|310941661|dbj|BAJ24184.1| 30S ribosomal protein S13 [Pseudomonas fluorescens]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAAKIKDLSDEQIELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|120597011|ref|YP_961585.1| 30S ribosomal protein S13 [Shewanella sp. W3-18-1]
 gi|146294819|ref|YP_001185243.1| 30S ribosomal protein S13 [Shewanella putrefaciens CN-32]
 gi|158706278|sp|A1RED6|RS13_SHESW RecName: Full=30S ribosomal protein S13
 gi|166231925|sp|A4YBW1|RS13_SHEPC RecName: Full=30S ribosomal protein S13
 gi|120557104|gb|ABM23031.1| SSU ribosomal protein S13P [Shewanella sp. W3-18-1]
 gi|145566509|gb|ABP77444.1| SSU ribosomal protein S13P [Shewanella putrefaciens CN-32]
 gi|319424602|gb|ADV52676.1| 30S ribosomal protein S13 [Shewanella putrefaciens 200]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|26987217|ref|NP_742642.1| 30S ribosomal protein S13 [Pseudomonas putida KT2440]
 gi|104779777|ref|YP_606275.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48]
 gi|148545761|ref|YP_001265863.1| 30S ribosomal protein S13 [Pseudomonas putida F1]
 gi|167031521|ref|YP_001666752.1| 30S ribosomal protein S13 [Pseudomonas putida GB-1]
 gi|32363292|sp|Q88QL3|RS13_PSEPK RecName: Full=30S ribosomal protein S13
 gi|158706264|sp|Q1IFU4|RS13_PSEE4 RecName: Full=30S ribosomal protein S13
 gi|166231917|sp|A5VXR9|RS13_PSEP1 RecName: Full=30S ribosomal protein S13
 gi|189044288|sp|B0KK88|RS13_PSEPG RecName: Full=30S ribosomal protein S13
 gi|24981856|gb|AAN66106.1|AE016239_1 ribosomal protein S13 [Pseudomonas putida KT2440]
 gi|95108764|emb|CAK13458.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48]
 gi|148509819|gb|ABQ76679.1| SSU ribosomal protein S13P [Pseudomonas putida F1]
 gi|166858009|gb|ABY96416.1| ribosomal protein S13 [Pseudomonas putida GB-1]
 gi|310941070|dbj|BAJ24409.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941100|dbj|BAJ24424.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941631|dbj|BAJ24169.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941991|dbj|BAJ24349.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|313496841|gb|ADR58207.1| RpsM [Pseudomonas putida BIRD-1]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|229077435|ref|ZP_04210086.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2]
 gi|228705885|gb|EEL58220.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2]
          Length = 127

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|229083455|ref|ZP_04215803.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44]
 gi|228699888|gb|EEL52525.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44]
          Length = 121

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGVSEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|94312225|ref|YP_585435.1| 30S ribosomal protein S13 [Cupriavidus metallidurans CH34]
 gi|194291000|ref|YP_002006907.1| 30S ribosomal protein s13 [Cupriavidus taiwanensis LMG 19424]
 gi|158706270|sp|Q1LI60|RS13_RALME RecName: Full=30S ribosomal protein S13
 gi|226712725|sp|B3R7E6|RS13_CUPTR RecName: Full=30S ribosomal protein S13
 gi|93356077|gb|ABF10166.1| 30S ribosomal subunit protein S13 [Cupriavidus metallidurans CH34]
 gi|193224835|emb|CAQ70846.1| 30S ribosomal subunit protein S13 [Cupriavidus taiwanensis LMG
           19424]
          Length = 121

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+GIG   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGIGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163840860|ref|YP_001625265.1| 30S ribosomal protein S13 [Renibacterium salmoninarum ATCC 33209]
 gi|189044289|sp|A9WSR3|RS13_RENSM RecName: Full=30S ribosomal protein S13
 gi|162954336|gb|ABY23851.1| SSU ribosomal protein S13P [Renibacterium salmoninarum ATCC 33209]
          Length = 125

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G   +     +  I P+ RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDLPREKRLEVALTYIYGVGKTRAHKTLAETGISPDVRVKDLSDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EVNYKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRK 111


>gi|146281192|ref|YP_001171345.1| 30S ribosomal protein S13 [Pseudomonas stutzeri A1501]
 gi|158706265|sp|A4VHQ2|RS13_PSEU5 RecName: Full=30S ribosomal protein S13
 gi|145569397|gb|ABP78503.1| ribosomal protein S13 [Pseudomonas stutzeri A1501]
 gi|310941901|dbj|BAJ24304.1| 30S ribosomal protein S13 [Pseudomonas stutzeri]
 gi|327479345|gb|AEA82655.1| 30S ribosomal protein S13 [Pseudomonas stutzeri DSM 4166]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   +Q+IC    + P  ++  L + +V  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTRAQEICAATGVNPAAKIKDLSDEQVELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRRDVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|120553674|ref|YP_958025.1| 30S ribosomal protein S13 [Marinobacter aquaeolei VT8]
 gi|158706245|sp|A1TYL9|RS13_MARAV RecName: Full=30S ribosomal protein S13
 gi|120323523|gb|ABM17838.1| SSU ribosomal protein S13P [Marinobacter aquaeolei VT8]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGKTTAQKLCDATGVKPDAKVKDLSDEQLEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVQMNIKRLKDLGCFRGLRHRHGLPVRGQRTKTNARTRK 110


>gi|317153935|ref|YP_004121983.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944186|gb|ADU63237.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2]
          Length = 123

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   +  I + + +  ++    L   EV  IR  I
Sbjct: 1   MARIAGVDLPRNKRMDIALTYIYGIGRTMALQILDTVKVDWQKNSDDLSADEVNVIRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR +  NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK
Sbjct: 61  ENNHKVEGDLRRDITSNIKRLMDIGSYRGLRHRRGLPVRGQKTKTNARTRK 111


>gi|300779799|ref|ZP_07089655.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030]
 gi|300533909|gb|EFK54968.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030]
          Length = 122

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKELLEKTGISPDLRTDNLTDDQVAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENSWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|30018404|ref|NP_830035.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 14579]
 gi|30260326|ref|NP_842703.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames]
 gi|47525391|ref|YP_016740.1| 30S ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183169|ref|YP_026421.1| 30S ribosomal protein S13 [Bacillus anthracis str. Sterne]
 gi|49481683|ref|YP_034486.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145084|ref|YP_081745.1| 30S ribosomal protein S13 [Bacillus cereus E33L]
 gi|118475903|ref|YP_893054.1| 30S ribosomal protein S13 [Bacillus thuringiensis str. Al Hakam]
 gi|206972311|ref|ZP_03233258.1| 30S ribosomal protein S13 [Bacillus cereus AH1134]
 gi|218234072|ref|YP_002364984.1| 30S ribosomal protein S13 [Bacillus cereus B4264]
 gi|218901340|ref|YP_002449174.1| ribosomal protein S13 [Bacillus cereus AH820]
 gi|225862187|ref|YP_002747565.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102]
 gi|227812808|ref|YP_002812817.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684]
 gi|228912874|ref|ZP_04076521.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228919085|ref|ZP_04082464.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228925388|ref|ZP_04088484.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931637|ref|ZP_04094543.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943940|ref|ZP_04106325.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228950683|ref|ZP_04112817.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228956576|ref|ZP_04118372.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228983390|ref|ZP_04143603.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229041040|ref|ZP_04189803.1| 30S ribosomal protein S13 [Bacillus cereus AH676]
 gi|229067900|ref|ZP_04201217.1| 30S ribosomal protein S13 [Bacillus cereus F65185]
 gi|229089266|ref|ZP_04220547.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42]
 gi|229107821|ref|ZP_04237457.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15]
 gi|229119797|ref|ZP_04249058.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201]
 gi|229125652|ref|ZP_04254684.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4]
 gi|229142941|ref|ZP_04271382.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24]
 gi|229148544|ref|ZP_04276800.1| 30S ribosomal protein S13 [Bacillus cereus m1550]
 gi|229153913|ref|ZP_04282043.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342]
 gi|229176735|ref|ZP_04304139.1| 30S ribosomal protein S13 [Bacillus cereus 172560W]
 gi|229182529|ref|ZP_04309780.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1]
 gi|229188420|ref|ZP_04315468.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876]
 gi|229602339|ref|YP_002864786.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248]
 gi|254686634|ref|ZP_05150493.1| 30S ribosomal protein S13 [Bacillus anthracis str. CNEVA-9066]
 gi|254726286|ref|ZP_05188068.1| 30S ribosomal protein S13 [Bacillus anthracis str. A1055]
 gi|254735291|ref|ZP_05192999.1| 30S ribosomal protein S13 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739483|ref|ZP_05197181.1| 30S ribosomal protein S13 [Bacillus anthracis str. Kruger B]
 gi|254751245|ref|ZP_05203283.1| 30S ribosomal protein S13 [Bacillus anthracis str. Vollum]
 gi|254756846|ref|ZP_05208874.1| 30S ribosomal protein S13 [Bacillus anthracis str. Australia 94]
 gi|296500968|ref|YP_003662668.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171]
 gi|300119552|ref|ZP_07057096.1| 30S ribosomal protein S13 [Bacillus cereus SJ1]
 gi|301051872|ref|YP_003790083.1| 30S ribosomal protein S13 [Bacillus anthracis CI]
 gi|49065839|sp|P62175|RS13_BACCR RecName: Full=30S ribosomal protein S13
 gi|49065840|sp|P62176|RS13_BACAN RecName: Full=30S ribosomal protein S13
 gi|81397477|sp|Q6HPN4|RS13_BACHK RecName: Full=30S ribosomal protein S13
 gi|81689825|sp|Q63H66|RS13_BACCZ RecName: Full=30S ribosomal protein S13
 gi|158706335|sp|A0R8K4|RS13_BACAH RecName: Full=30S ribosomal protein S13
 gi|226712691|sp|B7JKE5|RS13_BACC0 RecName: Full=30S ribosomal protein S13
 gi|226712693|sp|B7HJ73|RS13_BACC4 RecName: Full=30S ribosomal protein S13
 gi|254811126|sp|C3P9T0|RS13_BACAA RecName: Full=30S ribosomal protein S13
 gi|254811127|sp|C3LJW9|RS13_BACAC RecName: Full=30S ribosomal protein S13
 gi|254811128|sp|C1ET64|RS13_BACC3 RecName: Full=30S ribosomal protein S13
 gi|29893944|gb|AAP07236.1| SSU ribosomal protein S13P [Bacillus cereus ATCC 14579]
 gi|30253647|gb|AAP24189.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames]
 gi|47500539|gb|AAT29215.1| ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177096|gb|AAT52472.1| ribosomal protein S13 [Bacillus anthracis str. Sterne]
 gi|49333239|gb|AAT63885.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978553|gb|AAU20103.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus cereus
           E33L]
 gi|118415128|gb|ABK83547.1| SSU ribosomal protein S13P [Bacillus thuringiensis str. Al Hakam]
 gi|206732885|gb|EDZ50060.1| 30S ribosomal protein S13 [Bacillus cereus AH1134]
 gi|218162029|gb|ACK62021.1| ribosomal protein S13 [Bacillus cereus B4264]
 gi|218535885|gb|ACK88283.1| ribosomal protein S13 [Bacillus cereus AH820]
 gi|225787084|gb|ACO27301.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102]
 gi|227003895|gb|ACP13638.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684]
 gi|228595094|gb|EEK52865.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876]
 gi|228600984|gb|EEK58553.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1]
 gi|228606778|gb|EEK64195.1| 30S ribosomal protein S13 [Bacillus cereus 172560W]
 gi|228629594|gb|EEK86291.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342]
 gi|228634960|gb|EEK91533.1| 30S ribosomal protein S13 [Bacillus cereus m1550]
 gi|228640562|gb|EEK96951.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24]
 gi|228657844|gb|EEL13650.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4]
 gi|228663698|gb|EEL19277.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201]
 gi|228675670|gb|EEL30878.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15]
 gi|228694105|gb|EEL47787.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42]
 gi|228715259|gb|EEL67118.1| 30S ribosomal protein S13 [Bacillus cereus F65185]
 gi|228727337|gb|EEL78531.1| 30S ribosomal protein S13 [Bacillus cereus AH676]
 gi|228776380|gb|EEM24733.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228803141|gb|EEM49963.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809034|gb|EEM55519.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228815773|gb|EEM62009.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828065|gb|EEM73793.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834310|gb|EEM79851.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228840610|gb|EEM85872.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228846810|gb|EEM91815.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229266747|gb|ACQ48384.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248]
 gi|296322020|gb|ADH04948.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171]
 gi|298723024|gb|EFI63922.1| 30S ribosomal protein S13 [Bacillus cereus SJ1]
 gi|300374041|gb|ADK02945.1| 30S ribosomal protein S13 [Bacillus cereus biovar anthracis str.
           CI]
          Length = 121

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|114561358|ref|YP_748871.1| 30S ribosomal protein S13 [Shewanella frigidimarina NCIMB 400]
 gi|122301096|sp|Q089N2|RS13_SHEFN RecName: Full=30S ribosomal protein S13
 gi|114332651|gb|ABI70033.1| SSU ribosomal protein S13P [Shewanella frigidimarina NCIMB 400]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTSIAEDAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|116624177|ref|YP_826333.1| 30S ribosomal protein S13 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122253107|sp|Q01WB7|RS13_SOLUE RecName: Full=30S ribosomal protein S13
 gi|116227339|gb|ABJ86048.1| SSU ribosomal protein S13P [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 128

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P  KR    L YI+GIG   S+ + ++  I  ++++  L E E+ ++R  +
Sbjct: 1   MARLAGVDLPPGKRAEIGLTYIYGIGRTRSKSLLHRAGIDFDKKIRDLTEDEINKVRTIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  VEGDLR+ ++MNIKR +++G YRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  EEEGAVEGDLRKEISMNIKRHIEMGSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319442998|ref|ZP_07992154.1| 30S ribosomal protein S13 [Corynebacterium variabile DSM 44702]
          Length = 122

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   + ++  K  I P+ R   L + +V  ++  I
Sbjct: 1   MARLAGVDLPRDKRMEVALTYIYGIGPARAAELLEKTGISPDLRSKDLTDEQVSALKDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTWKVEGDLRREVAADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|310940980|dbj|BAJ24364.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|30248440|ref|NP_840510.1| 30S ribosomal protein S13 [Nitrosomonas europaea ATCC 19718]
 gi|32363227|sp|P59755|RS13_NITEU RecName: Full=30S ribosomal protein S13
 gi|30138326|emb|CAD84334.1| Ribosomal protein S13 [Nitrosomonas europaea ATCC 19718]
          Length = 119

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V  AL  I+GIG  +++ IC+ L IPP  ++  L + ++ ++R+++
Sbjct: 1   MARIAGVNLPSNKHVNIALTAIYGIGNTTARKICSDLQIPPFIKLKDLEDIKLDELRESV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR ++MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  SK-LIVEGDLRREISMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|241763532|ref|ZP_04761584.1| ribosomal protein S13 [Acidovorax delafieldii 2AN]
 gi|241367263|gb|EER61603.1| ribosomal protein S13 [Acidovorax delafieldii 2AN]
          Length = 121

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L +S++ +IR+ I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTRARKICEATGIAYSKKIKDLSDSDLEKIREQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|330953175|gb|EGH53435.1| 30S ribosomal protein S13 [Pseudomonas syringae Cit 7]
          Length = 118

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDL R + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLGREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|257054495|ref|YP_003132327.1| 30S ribosomal protein S13P [Saccharomonospora viridis DSM 43017]
 gi|256584367|gb|ACU95500.1| SSU ribosomal protein S13P [Saccharomonospora viridis DSM 43017]
          Length = 126

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+DI     + P+ RV  L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIYGIGRTRSKDIIAATQLNPDVRVKDLGDDDLAKLREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++Y+VEGDLRR V  +I+R +++GCY GLR RRGLPVRGQRT TNARTRK
Sbjct: 61  EENYKVEGDLRREVNADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRK 111


>gi|224477196|ref|YP_002634802.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254811165|sp|B9DM53|RS13_STACT RecName: Full=30S ribosomal protein S13
 gi|222421803|emb|CAL28617.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 121

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+G+G  ++  I  +  + P+ RV  L + E+ +IR+ +
Sbjct: 1   MARIAGIDIPREKRVVISLTYIYGVGKSTAAKILEEANVSPDTRVKDLTDDELGRIRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DA-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|78776525|ref|YP_392840.1| 30S ribosomal protein S13 [Sulfurimonas denitrificans DSM 1251]
 gi|91207632|sp|Q30TS6|RS13_SULDN RecName: Full=30S ribosomal protein S13
 gi|78497065|gb|ABB43605.1| SSU ribosomal protein S13P [Sulfurimonas denitrificans DSM 1251]
          Length = 120

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L Y++GIG  +S+ I +   I   +RV++L E ++  I + I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYVYGIGLHASRKILDATGIDYNKRVYELNEDDIAAITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK
Sbjct: 61  RASHVVEGDLRKQVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRK 111


>gi|332181994|gb|AEE17682.1| 30S ribosomal protein S13 [Treponema brennaborense DSM 12168]
          Length = 121

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+ +IC K  I P+  ++ L + ++  +R  I
Sbjct: 1   MARIAGVDLPN-KHVNIALTYIYGIGRSSADEICKKTKINPDAMINDLSQDDLAALRTVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + +Y+VEG LR  + +NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTR
Sbjct: 60  DGEYKVEGRLRSEIGLNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTR 109


>gi|325272030|ref|ZP_08138473.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51]
 gi|310941811|dbj|BAJ24259.1| 30S ribosomal protein S13 [Pseudomonas fulva]
 gi|324102834|gb|EGC00238.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51]
          Length = 118

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICVDAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|302379821|ref|ZP_07268305.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3]
 gi|302312409|gb|EFK94406.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3]
          Length = 116

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR VAMNIKRL ++ CYRGLRH++GLPVRGQ T  NARTRK
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGLRHKKGLPVRGQHTKNNARTRK 110


>gi|256830516|ref|YP_003159244.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028]
 gi|256579692|gb|ACU90828.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028]
          Length = 123

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG  ++  I +   I   +    L   ++  +R+ +
Sbjct: 1   MARLVGVDLPRNKRLDIALTYIYGIGRATALKILDATGIDWTKNSDDLTSDDINTLRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR +  NIKRLMD+GCYRGLRHRRGLP RGQRTHTNARTRK
Sbjct: 61  EASHKVEGDLRREIVANIKRLMDIGCYRGLRHRRGLPCRGQRTHTNARTRK 111


>gi|238921421|ref|YP_002934936.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146]
 gi|269140551|ref|YP_003297252.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202]
 gi|259494675|sp|C5BF29|RS13_EDWI9 RecName: Full=30S ribosomal protein S13
 gi|238870990|gb|ACR70701.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146]
 gi|267986212|gb|ACY86041.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202]
 gi|304560337|gb|ADM43001.1| SSU ribosomal protein S13p (S18e) [Edwardsiella tarda FL6-60]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICAAAGIAENVKISELSEEQIETLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVTLSIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|297571897|ref|YP_003697671.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595]
 gi|296932244|gb|ADH93052.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595]
          Length = 124

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   +Q+      + P+ RV  L E ++++++  I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGLTRAQESLAATGVNPDTRVKDLTEDDLVKLKNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DENYKVEGDLRREIQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|293390663|ref|ZP_06634997.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951197|gb|EFE01316.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  SK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|224531523|ref|ZP_03672155.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116]
 gi|224510988|gb|EEF81394.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116]
          Length = 125

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CN+  I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNRSNISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|71065081|ref|YP_263808.1| 30S ribosomal protein S13 [Psychrobacter arcticus 273-4]
 gi|91207720|sp|Q4FUD4|RS13_PSYA2 RecName: Full=30S ribosomal protein S13
 gi|71038066|gb|AAZ18374.1| SSU ribosomal protein S13P [Psychrobacter arcticus 273-4]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q I   + I P  +V QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK
Sbjct: 61  SE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110


>gi|310941871|dbj|BAJ24289.1| 30S ribosomal protein S13 [Pseudomonas straminea]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKICAATGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRK 110


>gi|300812373|ref|ZP_07092808.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496678|gb|EFK31765.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 116

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|111023122|ref|YP_706094.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226365621|ref|YP_002783404.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
 gi|123045552|sp|Q0S3F0|RS13_RHOSR RecName: Full=30S ribosomal protein S13
 gi|254811162|sp|C1B038|RS13_RHOOB RecName: Full=30S ribosomal protein S13
 gi|110822652|gb|ABG97936.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226244111|dbj|BAH54459.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
          Length = 124

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I +   + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|73542841|ref|YP_297361.1| 30S ribosomal protein S13 [Ralstonia eutropha JMP134]
 gi|91207721|sp|Q46WG6|RS13_RALEJ RecName: Full=30S ribosomal protein S13
 gi|72120254|gb|AAZ62517.1| SSU ribosomal protein S13P [Ralstonia eutropha JMP134]
          Length = 121

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+G+G   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163847947|ref|YP_001635991.1| 30S ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl]
 gi|222525827|ref|YP_002570298.1| 30S ribosomal protein S13 [Chloroflexus sp. Y-400-fl]
 gi|189040495|sp|A9WH90|RS13_CHLAA RecName: Full=30S ribosomal protein S13
 gi|254811139|sp|B9LJF6|RS13_CHLSY RecName: Full=30S ribosomal protein S13
 gi|163669236|gb|ABY35602.1| ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl]
 gi|222449706|gb|ACM53972.1| ribosomal protein S13 [Chloroflexus sp. Y-400-fl]
          Length = 127

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 79/100 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  A+ YI+GIG  +  +I  K  + PERRV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRG
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRG 100


>gi|289209307|ref|YP_003461373.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix]
 gi|288944938|gb|ADC72637.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AG+NIP  K  V AL  I+GIG   ++ IC    + PE +V  L ++EV  +R  I
Sbjct: 1   MARVAGINIPDQKHTVVALTAIYGIGPTRARQICEAAGVRPEIKVRDLTDAEVDALRAQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR ++MNIKRLMDLGCYRG+RHRRGLP+RGQ+T TNARTRK
Sbjct: 61  DR-IPVEGDLRREISMNIKRLMDLGCYRGVRHRRGLPLRGQQTQTNARTRK 110


>gi|289550167|ref|YP_003471071.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659203|ref|ZP_07912067.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590]
 gi|289179699|gb|ADC86944.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315495628|gb|EFU83959.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590]
          Length = 121

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGTSTAQKIVEQANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  ++VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DS-FKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|330470147|ref|YP_004407890.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
 gi|328813118|gb|AEB47290.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
          Length = 126

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYEGIRHRRGLPVRGQRTRTNARTRK 111


>gi|262038712|ref|ZP_06012072.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
 gi|261747264|gb|EEY34743.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
          Length = 121

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  +S +I  K  +  + +V  L E +V +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEISLTYIFGIGRSTSNEILEKAGVDKDIKVKDLTEEQVGKIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL+D+  YRGLRHR GLPVRGQ+T TNARTRK   K  +A+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKMAIAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|158317767|ref|YP_001510275.1| 30S ribosomal protein S13 [Frankia sp. EAN1pec]
 gi|226712739|sp|A8LB08|RS13_FRASN RecName: Full=30S ribosomal protein S13
 gi|158113172|gb|ABW15369.1| ribosomal protein S13 [Frankia sp. EAN1pec]
          Length = 126

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S+D      + P+ RV  L + EV ++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATGVNPDTRVRDLTDDEVQKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|85057777|ref|YP_456693.1| 30S ribosomal protein S13 [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518126|sp|Q2NIX9|RS13_AYWBP RecName: Full=30S ribosomal protein S13
 gi|84789882|gb|ABC65614.1| SSU ribosomal protein S13P [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 126

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K S  I N+L I    RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELKIDQNIRVKNLTEQQLSALRIEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K   K  +A 
Sbjct: 61  TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAAIAG 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|262273357|ref|ZP_06051171.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886]
 gi|262222335|gb|EEY73646.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I  +  I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAESTKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|113869408|ref|YP_727897.1| 30S ribosomal protein S13 [Ralstonia eutropha H16]
 gi|123328830|sp|Q0K642|RS13_RALEH RecName: Full=30S ribosomal protein S13
 gi|113528184|emb|CAJ94529.1| SSU ribosomal protein S13 [Ralstonia eutropha H16]
          Length = 121

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+G+G   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|298531063|ref|ZP_07018464.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509086|gb|EFI32991.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 122

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ K++  +L YI+GIG  ++  I +   +   R+  +L   EV  IR  +
Sbjct: 1   MARIAGVDLPKRKKIGISLTYIYGIGRTTALKILDASGVDWTRKTEELTSDEVNVIRGEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR  + +IKRLMD+GCYRGLRHRR +PVRGQRTHTNAR RK
Sbjct: 61  ENNYKVEGDLRREKSADIKRLMDIGCYRGLRHRRSMPVRGQRTHTNARIRK 111


>gi|172056165|ref|YP_001812625.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15]
 gi|226712737|sp|B1YGX5|RS13_EXIS2 RecName: Full=30S ribosomal protein S13
 gi|171988686|gb|ACB59608.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15]
          Length = 121

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L YI+G+G  ++Q +  +  I  + R  +L E ++ Q+R  +
Sbjct: 1   MARIAGVDIPREKRIVISLTYIYGVGKTTAQKVLKEAGISEDTRTRELTEEQLNQLRDGL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 61  DK-VKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQNTKNNSRTRK 110


>gi|313888778|ref|ZP_07822439.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845147|gb|EFR32547.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 120

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   SQ+I     +  + RV  L E+E+ +IR+ I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGKPRSQEILTAAGVDFDTRVKDLTEAELAKIREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK
Sbjct: 61  DK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKMGLPVRGQKTKTNARTRK 110


>gi|16272741|ref|NP_438959.1| 30S ribosomal protein S13 [Haemophilus influenzae Rd KW20]
 gi|1173196|sp|P44380|RS13_HAEIN RecName: Full=30S ribosomal protein S13
 gi|1573810|gb|AAC22458.1| ribosomal protein S13 (rpS13) [Haemophilus influenzae Rd KW20]
          Length = 122

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|325684743|gb|EGD26897.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 116

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|219849863|ref|YP_002464296.1| 30S ribosomal protein S13 [Chloroflexus aggregans DSM 9485]
 gi|254811138|sp|B8G6Q1|RS13_CHLAD RecName: Full=30S ribosomal protein S13
 gi|219544122|gb|ACL25860.1| ribosomal protein S13 [Chloroflexus aggregans DSM 9485]
          Length = 126

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 78/100 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  A+ YI+GIG  +  D+  K  + P RRV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKKIEIAITYIYGIGRSNGMDVLRKANVDPNRRVRDLTEEEVGRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRG
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRG 100


>gi|91774658|ref|YP_544414.1| 30S ribosomal protein S13 [Methylobacillus flagellatus KT]
 gi|123380633|sp|Q1H4L4|RS13_METFK RecName: Full=30S ribosomal protein S13
 gi|91708645|gb|ABE48573.1| SSU ribosomal protein S13P [Methylobacillus flagellatus KT]
          Length = 120

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G  +++ IC    +    ++  L ++EV ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIALTSIYGVGRTTAKQICLAAGVSATAKIKDLNDAEVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  QVEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-LQVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|12045028|ref|NP_072838.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|255660324|ref|ZP_05405733.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|1350932|sp|P47421|RS13_MYCGE RecName: Full=30S ribosomal protein S13
 gi|3844771|gb|AAC71394.1| ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|166079035|gb|ABY79653.1| ribosomal protein S13 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 124

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KR+  AL YI GIG  S++ I  K  I P++RV  L E E++ IR A 
Sbjct: 1   MARILGIDIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EGDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK
Sbjct: 60  ASGYKIEGDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRK 110


>gi|331004908|ref|ZP_08328324.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989]
 gi|330421295|gb|EGG95545.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 84/111 (75%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG  +++ I  ++ I    ++ +L E+++ +IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVYGIGSTTAKRILAEVGIAEATKISELSETDMDRIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AKE-TVEGDLRREVSMNIKRLMDLGCYRGIRHRRNLPLRGQRTKTNARTRK 110


>gi|217077307|ref|YP_002335025.1| 30S ribosomal protein S13 [Thermosipho africanus TCF52B]
 gi|226712795|sp|B7IHX0|RS13_THEAB RecName: Full=30S ribosomal protein S13
 gi|217037162|gb|ACJ75684.1| ribosomal protein S13p/S18e [Thermosipho africanus TCF52B]
          Length = 122

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL YI+GIG   ++ IC    I P++RV +L + E+ +I   I
Sbjct: 1   MARIVGVEIPNDKKVEIALTYIYGIGRTRAKQICEATNIDPDKRVRELNDEEISKIATYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+++VEG+LR  V  NIKRL+D+GCYRG RH+ GLPVRGQ+T +NARTRK
Sbjct: 61  QQNFKVEGELRTEVMQNIKRLIDIGCYRGFRHKLGLPVRGQKTKSNARTRK 111


>gi|24371851|ref|NP_715893.1| 30S ribosomal protein S13 [Shewanella oneidensis MR-1]
 gi|113968566|ref|YP_732359.1| 30S ribosomal protein S13 [Shewanella sp. MR-4]
 gi|114045729|ref|YP_736279.1| 30S ribosomal protein S13 [Shewanella sp. MR-7]
 gi|117918679|ref|YP_867871.1| 30S ribosomal protein S13 [Shewanella sp. ANA-3]
 gi|32363324|sp|Q8EK48|RS13_SHEON RecName: Full=30S ribosomal protein S13
 gi|123030062|sp|Q0HNR5|RS13_SHESM RecName: Full=30S ribosomal protein S13
 gi|123131836|sp|Q0I083|RS13_SHESR RecName: Full=30S ribosomal protein S13
 gi|158706277|sp|A0KRP6|RS13_SHESA RecName: Full=30S ribosomal protein S13
 gi|24345668|gb|AAN53338.1|AE015474_1 ribosomal protein S13 [Shewanella oneidensis MR-1]
 gi|113883250|gb|ABI37302.1| SSU ribosomal protein S13P [Shewanella sp. MR-4]
 gi|113887171|gb|ABI41222.1| SSU ribosomal protein S13P [Shewanella sp. MR-7]
 gi|117611011|gb|ABK46465.1| SSU ribosomal protein S13P [Shewanella sp. ANA-3]
          Length = 118

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|317494320|ref|ZP_07952734.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917570|gb|EFV38915.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 118

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|319893176|ref|YP_004150051.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162872|gb|ADV06415.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323463776|gb|ADX75929.1| ribosomal protein S13 [Staphylococcus pseudintermedius ED99]
          Length = 121

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  S+Q I ++  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGIGKTSAQKILSEANVSEDTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPV GQ+T  NARTRK
Sbjct: 61  DG-YKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVNGQKTKNNARTRK 110


>gi|329298512|ref|ZP_08255848.1| 30S ribosomal protein S13 [Plautia stali symbiont]
          Length = 118

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NI   K  V AL  I GIG   S+ IC +  I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINISDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRRKITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|42779216|ref|NP_976463.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10987]
 gi|152973981|ref|YP_001373498.1| 30S ribosomal protein S13 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|217957710|ref|YP_002336254.1| 30S ribosomal protein S13 [Bacillus cereus AH187]
 gi|222093905|ref|YP_002527955.1| 30S ribosomal protein s13 [Bacillus cereus Q1]
 gi|229136981|ref|ZP_04265608.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26]
 gi|229194525|ref|ZP_04321328.1| 30S ribosomal protein S13 [Bacillus cereus m1293]
 gi|81411360|sp|Q73F71|RS13_BACC1 RecName: Full=30S ribosomal protein S13
 gi|189040490|sp|A7GK45|RS13_BACCN RecName: Full=30S ribosomal protein S13
 gi|226712694|sp|B7HQW9|RS13_BACC7 RecName: Full=30S ribosomal protein S13
 gi|254811129|sp|B9IZL9|RS13_BACCQ RecName: Full=30S ribosomal protein S13
 gi|42735131|gb|AAS39071.1| ribosomal protein S13 [Bacillus cereus ATCC 10987]
 gi|152022733|gb|ABS20503.1| ribosomal protein S13 [Bacillus cytotoxicus NVH 391-98]
 gi|217063520|gb|ACJ77770.1| ribosomal protein S13 [Bacillus cereus AH187]
 gi|221237953|gb|ACM10663.1| ribosomal protein S13 [Bacillus cereus Q1]
 gi|228588991|gb|EEK47006.1| 30S ribosomal protein S13 [Bacillus cereus m1293]
 gi|228646519|gb|EEL02726.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26]
 gi|324324126|gb|ADY19386.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 121

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|237749537|ref|ZP_04580017.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13]
 gi|229380899|gb|EEO30990.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13]
          Length = 121

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +V  L  I GIG   +++IC    + P ++V  L ++++ ++R  I
Sbjct: 1   MARIAGVNIPNHQHIVIGLTAIFGIGRPRAEEICAATGVDPTKKVKDLDDNDLEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|153854995|ref|ZP_01996208.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814]
 gi|149752492|gb|EDM62423.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814]
          Length = 127

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDDDVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 66  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 116


>gi|93005336|ref|YP_579773.1| 30S ribosomal protein S13 [Psychrobacter cryohalolentis K5]
 gi|122415888|sp|Q1QDG4|RS13_PSYCK RecName: Full=30S ribosomal protein S13
 gi|92393014|gb|ABE74289.1| SSU ribosomal protein S13P [Psychrobacter cryohalolentis K5]
          Length = 118

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q I   + I P  +V QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK
Sbjct: 61  AE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110


>gi|239825718|ref|YP_002948342.1| 30S ribosomal protein S13 [Geobacillus sp. WCH70]
 gi|259494681|sp|C5D3U2|RS13_GEOSW RecName: Full=30S ribosomal protein S13
 gi|239806011|gb|ACS23076.1| ribosomal protein S13 [Geobacillus sp. WCH70]
          Length = 121

 Score =  127 bits (320), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 85/111 (76%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR V++NIKRL+++GCYRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  GR-LKVEGDLRREVSLNIKRLIEIGCYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|257454068|ref|ZP_05619342.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60]
 gi|257448546|gb|EEV23515.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60]
          Length = 118

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  + +L YI GIG  ++  I   + I P  ++ +L ++++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAIISLTYIFGIGRTTAAKILEAVNIAPTTKISELNDTQLDAVRTQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y  EGDLRR ++MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK
Sbjct: 61  AE-YATEGDLRREISMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRK 110


>gi|300742032|ref|ZP_07072053.1| 30S ribosomal protein S13 [Rothia dentocariosa M567]
 gi|311111946|ref|YP_003983168.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931]
 gi|300381217|gb|EFJ77779.1| 30S ribosomal protein S13 [Rothia dentocariosa M567]
 gi|310943440|gb|ADP39734.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931]
          Length = 153

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   + +      + P+ RV  L + E++ +R  I
Sbjct: 32  MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 91

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 92  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 142


>gi|225709440|gb|ACO10566.1| 30S ribosomal protein S13 [Caligus rogercresseyi]
          Length = 125

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR V  L YI+GIG  SS+ I  +  I    +V +  + ++  IRQ +
Sbjct: 1   MARIAGVDLPKNKRGVIGLTYIYGIGLTSSKKILVEAEIDESVKVREWSDKDIKSIRQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y VEG LR  + +NIKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK
Sbjct: 61  ADSYTVEGQLRTEIQLNIKRLMDIACYRGLRHRKGLPLRGQRTQTNARTRK 111


>gi|148377784|ref|YP_001256660.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2]
 gi|291320471|ref|YP_003515735.1| 30S ribosomal protein S13 [Mycoplasma agalactiae]
 gi|313678390|ref|YP_004056130.1| 30S ribosomal protein S13 [Mycoplasma bovis PG45]
 gi|226712766|sp|A5IYW1|RS13_MYCAP RecName: Full=30S ribosomal protein S13
 gi|148291830|emb|CAL59220.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2]
 gi|290752806|emb|CBH40781.1| 30S ribosomal protein S13 [Mycoplasma agalactiae]
 gi|312950177|gb|ADR24772.1| ribosomal protein S13 [Mycoplasma bovis PG45]
          Length = 123

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG  S+Q+IC K  I    RV  L E+++  IR+ I
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGRTSAQEICAKAKIDENIRVKDLSEAQLSAIRE-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y  EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T +NARTRK
Sbjct: 60  AKEYVTEGDLRREVSLNIKRLMEVKCYRGIRHRKGLPVRGQSTKSNARTRK 110


>gi|85713164|ref|ZP_01044196.1| Ribosomal protein S13 [Idiomarina baltica OS145]
 gi|85693034|gb|EAQ31000.1| Ribosomal protein S13 [Idiomarina baltica OS145]
          Length = 118

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   S  IC    I  + ++  L E ++  +R+A+
Sbjct: 1   MARIAGINVPDNKHAVIALTAIYGIGRTRSSAICEAAGIAEDTQIGTLSEEKLDVLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|104773566|ref|YP_618546.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513563|ref|YP_812469.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275667|sp|Q04BZ1|RS13_LACDB RecName: Full=30S ribosomal protein S13
 gi|123077333|sp|Q1GBJ4|RS13_LACDA RecName: Full=30S ribosomal protein S13
 gi|103422647|emb|CAI97255.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092878|gb|ABJ58031.1| SSU ribosomal protein S13P [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125198|gb|ADY84528.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 116

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|218135256|ref|ZP_03464060.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990641|gb|EEC56652.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC
           43243]
          Length = 123

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  +  + P+ RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILAEAQVNPDTRVRDLTDEEVAKIRDVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           E D   VEGDLRR +AMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART
Sbjct: 61  ENDNILVEGDLRRDIAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNART 110


>gi|85060234|ref|YP_455936.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans']
 gi|123518717|sp|Q2NQP4|RS13_SODGM RecName: Full=30S ribosomal protein S13
 gi|84780754|dbj|BAE75531.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans']
          Length = 118

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQHICAATGIAEHVKISELSEEQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  TK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|312140892|ref|YP_004008228.1| 30S ribosomal protein s13 rpsm [Rhodococcus equi 103S]
 gi|325675470|ref|ZP_08155154.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
 gi|311890231|emb|CBH49549.1| 30S ribosomal protein S13 RpsM [Rhodococcus equi 103S]
 gi|325553441|gb|EGD23119.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
          Length = 122

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG  +S++I     + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTTSKEILAATGVNPDLRSKDLTDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EESVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|239636209|ref|ZP_04677213.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603]
 gi|239598225|gb|EEQ80718.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603]
 gi|330685162|gb|EGG96826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU121]
          Length = 121

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|167973083|ref|ZP_02555360.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|167974840|ref|ZP_02557117.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|167975997|ref|ZP_02558274.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|167988496|ref|ZP_02570167.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|168362009|ref|ZP_02695188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|195867601|ref|ZP_03079603.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273653|ref|ZP_03206188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554322|ref|YP_002284654.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550772|ref|ZP_03771721.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
 gi|225551259|ref|ZP_03772205.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|226712802|sp|B5ZB64|RS13_UREU1 RecName: Full=30S ribosomal protein S13
 gi|171903351|gb|EDT49640.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209077|gb|EDU06120.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018818|gb|EDU56858.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997752|gb|EDU66849.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659696|gb|EDX53076.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660658|gb|EDX53913.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249681|gb|EDY74462.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541823|gb|ACI60052.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379074|gb|EEH01439.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|225379926|gb|EEH02288.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
          Length = 132

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 83/118 (70%), Gaps = 7/118 (5%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57
           MARI GV+IP  KRVV +L YI GIG  +SQ I     I    RV+ L + ++ +IR   
Sbjct: 1   MARILGVDIPNDKRVVISLTYIFGIGKSTSQKILKLANIDENIRVNDLADEQIAEIRRVA 60

Query: 58  ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +A  +  Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRK 118


>gi|313904926|ref|ZP_07838297.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6]
 gi|313470183|gb|EFR65514.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6]
          Length = 123

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  +  +  + P+ RV  L + EV  +  AI
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSTKLLAQAGVNPDTRVRDLTDDEVKSLTNAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+    VEGDLRR +AMNIKRL ++GCYRG RHR GLPVRGQ+T TNARTRK
Sbjct: 61  EELQVTVEGDLRREIAMNIKRLQEIGCYRGKRHRVGLPVRGQKTKTNARTRK 112


>gi|225020481|ref|ZP_03709673.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305679948|ref|ZP_07402758.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266]
 gi|224946870|gb|EEG28079.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660568|gb|EFM50065.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266]
          Length = 122

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLKETGISPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|161897604|ref|YP_948629.2| 30S ribosomal protein S13 [Arthrobacter aurescens TC1]
 gi|158706372|sp|A1R8R7|RS13_ARTAT RecName: Full=30S ribosomal protein S13
          Length = 125

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111


>gi|283796528|ref|ZP_06345681.1| 30S ribosomal protein S13 [Clostridium sp. M62/1]
 gi|291075942|gb|EFE13306.1| 30S ribosomal protein S13 [Clostridium sp. M62/1]
 gi|295092571|emb|CBK78678.1| 30S ribosomal protein S13 [Clostridium cf. saccharolyticum K10]
          Length = 122

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASSNRILAEAGVNPDTRVKDLTDDEVKKLAAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK
Sbjct: 61  ADTQVVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRK 111


>gi|308178108|ref|YP_003917514.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117]
 gi|307745571|emb|CBT76543.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117]
          Length = 124

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++      I P+ RV  L + +++Q+R  +
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETIAATGISPDIRVKDLTDEQLVQLRDFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR V  +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGTYKVEGDLRREVQADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRK 111


>gi|111220571|ref|YP_711365.1| 30S ribosomal protein S13 [Frankia alni ACN14a]
 gi|123143523|sp|Q0RRP6|RS13_FRAAA RecName: Full=30S ribosomal protein S13
 gi|111148103|emb|CAJ59771.1| 30S ribosomal subunit protein S13 [Frankia alni ACN14a]
          Length = 126

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S++      + P+ RV  L E E++++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRTRSRETLAATGVNPDTRVRDLSEDEIVRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|310941751|dbj|BAJ24229.1| 30S ribosomal protein S13 [Pseudomonas azotoformans]
 gi|310941961|dbj|BAJ24334.1| 30S ribosomal protein S13 [Pseudomonas fluorescens]
          Length = 118

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVAGVNPAAKIKDLSDEQIELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|306835267|ref|ZP_07468299.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726]
 gi|304568860|gb|EFM44393.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726]
          Length = 122

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + +V  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGSWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 111


>gi|227509954|ref|ZP_03940003.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227512887|ref|ZP_03942936.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577]
 gi|227523015|ref|ZP_03953064.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290]
 gi|227083887|gb|EEI19199.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577]
 gi|227089833|gb|EEI25145.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290]
 gi|227190560|gb|EEI70627.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 121

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG  +S+ I  +  +  + RV  L   +  +IR AI
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIFGIGTSTSEKILAQAGVSEDVRVRDLTPDQEDKIR-AI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK     GV R
Sbjct: 60  VSDLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKATAGVGR 119

Query: 121 KR 122
           ++
Sbjct: 120 RK 121


>gi|257126745|ref|YP_003164859.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
 gi|260891352|ref|ZP_05902615.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
 gi|257050684|gb|ACV39868.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
 gi|260858735|gb|EEX73235.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
          Length = 121

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  +S  I     I  + RV  L E +V ++R A+
Sbjct: 1   MARIAGVDIPRNKRVEVSLTYIFGIGRSTSNKILGATGIDRDTRVKDLTEEQVAKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL+D+  YRGLRHR GLPVRGQ+T TNARTRK   +  +A+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVRMAIAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|227894544|ref|ZP_04012349.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047]
 gi|227863703|gb|EEJ71124.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047]
          Length = 116

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|259047531|ref|ZP_05737932.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175]
 gi|259035722|gb|EEW36977.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175]
          Length = 121

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +S+ I     +  + RV +L   E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGITTSKQILAAANVNEDTRVRELTNDELDRIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|157690925|ref|YP_001485387.1| 30S ribosomal protein S13 [Bacillus pumilus SAFR-032]
 gi|194017484|ref|ZP_03056095.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061]
 gi|166991599|sp|A8F9B0|RS13_BACP2 RecName: Full=30S ribosomal protein S13
 gi|157679683|gb|ABV60827.1| ribosomal protein S13 [Bacillus pumilus SAFR-032]
 gi|194010756|gb|EDW20327.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061]
          Length = 121

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|296113776|ref|YP_003627714.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4]
 gi|295921470|gb|ADG61821.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4]
 gi|326562121|gb|EGE12449.1| 30S ribosomal protein S13 [Moraxella catarrhalis 7169]
 gi|326564514|gb|EGE14740.1| 30S ribosomal protein S13 [Moraxella catarrhalis 46P47B1]
 gi|326565697|gb|EGE15860.1| 30S ribosomal protein S13 [Moraxella catarrhalis 12P80B1]
 gi|326566266|gb|EGE16418.1| 30S ribosomal protein S13 [Moraxella catarrhalis 103P14B1]
 gi|326567082|gb|EGE17204.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC1]
 gi|326568346|gb|EGE18426.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC7]
 gi|326572247|gb|EGE22242.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC8]
 gi|326574589|gb|EGE24529.1| 30S ribosomal protein S13 [Moraxella catarrhalis O35E]
 gi|326574845|gb|EGE24775.1| 30S ribosomal protein S13 [Moraxella catarrhalis 101P30B1]
 gi|326576169|gb|EGE26084.1| 30S ribosomal protein S13 [Moraxella catarrhalis CO72]
          Length = 118

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +++ I   + I    ++  L +S++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTTAKQILAAVGIEETTKIGSLDDSQLDAVRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR V+MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK
Sbjct: 61  -ANYTVEGDLRREVSMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRK 110


>gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320]
 gi|194684577|emb|CAR46425.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320]
          Length = 118

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|30918554|sp|P15757|RS13_BACST RecName: Full=30S ribosomal protein S13; AltName: Full=BS14
          Length = 120

 Score =  127 bits (319), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 85/111 (76%), Gaps = 2/111 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQ-ILKEAGVSEDTRVRDLTEEELGRIREIV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 60  GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRK 109


>gi|302869945|ref|YP_003838582.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
 gi|302572804|gb|ADL49006.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
          Length = 126

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++RV  L + E++++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTKTNARTRK 111


>gi|296137042|ref|YP_003644284.1| 30S ribosomal protein S13 [Thiomonas intermedia K12]
 gi|294341219|emb|CAZ89620.1| 30S ribosomal subunit protein S13 [Thiomonas sp. 3As]
 gi|295797164|gb|ADG31954.1| 30S ribosomal protein S13 [Thiomonas intermedia K12]
          Length = 121

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG  +++ IC+   +P  +R+  L ++++ ++R+AI
Sbjct: 1   MARIAGINIPPHQHSEIGLTAIYGIGRTTARAICDASGVPYNKRIKDLSDADLEKVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK   KG +  
Sbjct: 61  GK-LTIEGDLRREISVNIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGSITL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|238061097|ref|ZP_04605806.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
 gi|237882908|gb|EEP71736.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
          Length = 126

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRK 111


>gi|170718271|ref|YP_001785289.1| 30S ribosomal protein S13 [Haemophilus somnus 2336]
 gi|168826400|gb|ACA31771.1| ribosomal protein S13 [Haemophilus somnus 2336]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|330447015|ref|ZP_08310665.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491206|dbj|GAA05162.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|251793848|ref|YP_003008580.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700]
 gi|247535247|gb|ACS98493.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICASAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|255326869|ref|ZP_05367945.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296]
 gi|283457574|ref|YP_003362157.1| 30S ribosomal protein S13 [Rothia mucilaginosa DY-18]
 gi|255296086|gb|EET75427.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296]
 gi|283133572|dbj|BAI64337.1| ribosomal protein S13 [Rothia mucilaginosa DY-18]
          Length = 122

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   + +      + P+ RV  L + E++ +R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|166031633|ref|ZP_02234462.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC
           27755]
 gi|166028610|gb|EDR47367.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC
           27755]
          Length = 139

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 18  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAQAGVNPDIRCRDLTDDDVKKISAVI 77

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK
Sbjct: 78  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRK 128


>gi|315501406|ref|YP_004080293.1| 30S ribosomal protein s13 [Micromonospora sp. L5]
 gi|315408025|gb|ADU06142.1| 30S ribosomal protein S13 [Micromonospora sp. L5]
          Length = 126

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++RV  L + E++++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRK 111


>gi|313891541|ref|ZP_07825151.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E]
 gi|329121853|ref|ZP_08250468.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965]
 gi|313120000|gb|EFR43182.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E]
 gi|327467791|gb|EGF13283.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965]
          Length = 125

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S+ I  +  + P+ RV  L E +V +IR A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTLSKKILAETGVSPDTRVRDLNEDDVAKIRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR  ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK
Sbjct: 61  GE-YKVEGDLRREESLNIKRLVEIGSYRGRRHRLGLPTRGQRTKTNARTRK 110


>gi|145640898|ref|ZP_01796480.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|145274412|gb|EDK14276.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.4-21]
          Length = 122

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|313884421|ref|ZP_07818182.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620205|gb|EFR31633.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 120

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG K++Q+I  +  +  + RV  L   E+ +IRQ I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKKTAQNILAEANVSEDTRVKDLTNEELDRIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR + M+IKRL ++G YRGLRHRRGLPVRGQ T  NARTRK
Sbjct: 61  DG-IKVEGDLRRDIRMDIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRK 110


>gi|113460230|ref|YP_718288.1| 30S ribosomal protein S13 [Haemophilus somnus 129PT]
 gi|123031100|sp|Q0I140|RS13_HAES1 RecName: Full=30S ribosomal protein S13
 gi|112822273|gb|ABI24362.1| SSU ribosomal protein S13P [Haemophilus somnus 129PT]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|306821594|ref|ZP_07455192.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550339|gb|EFM38332.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 122

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+  L YI GIG ++S  I     I    R+  L E +V  +R+ I
Sbjct: 1   MARIAGVDLPRDKRVIIGLTYIFGIGKQTSAKILATTGIDESIRIKDLSEEQVNLLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDL+R +++NIKRL D+ CYRGLRH +GLPVRGQ+T TNARTRK
Sbjct: 61  DNNYTVEGDLKREISLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNARTRK 111


>gi|228989343|ref|ZP_04149334.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442]
 gi|228995526|ref|ZP_04155194.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17]
 gi|229003151|ref|ZP_04160997.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4]
 gi|228758114|gb|EEM07313.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4]
 gi|228764255|gb|EEM13134.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17]
 gi|228770421|gb|EEM18994.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442]
          Length = 121

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK
Sbjct: 61  DR-VKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRK 110


>gi|152978163|ref|YP_001343792.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z]
 gi|150839886|gb|ABR73857.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQTICAAAGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|68249395|ref|YP_248507.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP]
 gi|145628306|ref|ZP_01784107.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21]
 gi|145630546|ref|ZP_01786326.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|145632158|ref|ZP_01787893.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655]
 gi|145634789|ref|ZP_01790497.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA]
 gi|145638399|ref|ZP_01794009.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII]
 gi|148826556|ref|YP_001291309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE]
 gi|148827988|ref|YP_001292741.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG]
 gi|229844667|ref|ZP_04464806.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1]
 gi|229845850|ref|ZP_04465962.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1]
 gi|260579891|ref|ZP_05847721.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW]
 gi|260581616|ref|ZP_05849413.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127]
 gi|319775266|ref|YP_004137754.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047]
 gi|319897706|ref|YP_004135903.1| 30S ribosomal subunit protein s13 [Haemophilus influenzae F3031]
 gi|81336178|sp|Q4QMA0|RS13_HAEI8 RecName: Full=30S ribosomal protein S13
 gi|158706235|sp|A5UDS5|RS13_HAEIE RecName: Full=30S ribosomal protein S13
 gi|158706236|sp|A5UHV2|RS13_HAEIG RecName: Full=30S ribosomal protein S13
 gi|68057594|gb|AAX87847.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP]
 gi|144980081|gb|EDJ89740.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21]
 gi|144983936|gb|EDJ91378.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|144987065|gb|EDJ93595.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655]
 gi|145267955|gb|EDK07951.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA]
 gi|145272728|gb|EDK12635.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII]
 gi|148716716|gb|ABQ98926.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE]
 gi|148719230|gb|ABR00358.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG]
 gi|229810854|gb|EEP46571.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1]
 gi|229812381|gb|EEP48071.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1]
 gi|260093175|gb|EEW77108.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW]
 gi|260095209|gb|EEW79100.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127]
 gi|301169518|emb|CBW29119.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae 10810]
 gi|309751539|gb|ADO81523.1| 30S ribosomal protein S13 [Haemophilus influenzae R2866]
 gi|309973709|gb|ADO96910.1| 30S ribosomal protein S13 [Haemophilus influenzae R2846]
 gi|317433212|emb|CBY81587.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3031]
 gi|317449857|emb|CBY86068.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047]
          Length = 118

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|126176333|ref|YP_001052482.1| 30S ribosomal protein S13 [Shewanella baltica OS155]
 gi|152998771|ref|YP_001364452.1| 30S ribosomal protein S13 [Shewanella baltica OS185]
 gi|160873347|ref|YP_001552663.1| 30S ribosomal protein S13 [Shewanella baltica OS195]
 gi|217975179|ref|YP_002359930.1| 30S ribosomal protein S13 [Shewanella baltica OS223]
 gi|304412786|ref|ZP_07394388.1| 30S ribosomal protein S13 [Shewanella baltica OS183]
 gi|307307450|ref|ZP_07587185.1| 30S ribosomal protein S13 [Shewanella baltica BA175]
 gi|166231923|sp|A3DA50|RS13_SHEB5 RecName: Full=30S ribosomal protein S13
 gi|166231924|sp|A6WHV0|RS13_SHEB8 RecName: Full=30S ribosomal protein S13
 gi|189044294|sp|A9KWC3|RS13_SHEB9 RecName: Full=30S ribosomal protein S13
 gi|254811164|sp|B8EBI3|RS13_SHEB2 RecName: Full=30S ribosomal protein S13
 gi|125999538|gb|ABN63613.1| SSU ribosomal protein S13P [Shewanella baltica OS155]
 gi|151363389|gb|ABS06389.1| ribosomal protein S13 [Shewanella baltica OS185]
 gi|160858869|gb|ABX47403.1| ribosomal protein S13 [Shewanella baltica OS195]
 gi|217500314|gb|ACK48507.1| ribosomal protein S13 [Shewanella baltica OS223]
 gi|304348866|gb|EFM13282.1| 30S ribosomal protein S13 [Shewanella baltica OS183]
 gi|306910238|gb|EFN40671.1| 30S ribosomal protein S13 [Shewanella baltica BA175]
 gi|315265575|gb|ADT92428.1| 30S ribosomal protein S13 [Shewanella baltica OS678]
          Length = 118

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|327438301|dbj|BAK14666.1| ribosomal protein S13 [Solibacillus silvestris StLB046]
          Length = 121

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +SQ +     I    RV  L E ++ QIR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKTTSQKVLAGAGIDENTRVKDLTEDQLNQIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+ EGDLRR V++NIKRLM++   RG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-YKTEGDLRREVSLNIKRLMEIASNRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|226305367|ref|YP_002765325.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229489477|ref|ZP_04383340.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
 gi|259494688|sp|C0ZW51|RS13_RHOE4 RecName: Full=30S ribosomal protein S13
 gi|226184482|dbj|BAH32586.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229323574|gb|EEN89332.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
          Length = 124

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 84/111 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KR+  AL YI+GIG   S++I +   + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLSGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|330432102|gb|AEC17161.1| 30S ribosomal protein S13 [Gallibacterium anatis UMN179]
          Length = 118

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC+ + I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRAQHICDAVGIAGSVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|111115329|ref|YP_709947.1| 30S ribosomal protein S13 [Borrelia afzelii PKo]
 gi|122956352|sp|Q0SN07|RS13_BORAP RecName: Full=30S ribosomal protein S13
 gi|110890603|gb|ABH01771.1| ribosomal protein S13 [Borrelia afzelii PKo]
          Length = 125

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK  I   +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISSSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRK 111


>gi|78484661|ref|YP_390586.1| 30S ribosomal protein S13 [Thiomicrospira crunogena XCL-2]
 gi|91207630|sp|Q31IW1|RS13_THICR RecName: Full=30S ribosomal protein S13
 gi|78362947|gb|ABB40912.1| SSU ribosomal protein S13P [Thiomicrospira crunogena XCL-2]
          Length = 118

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +V  L  I+G+G  ++Q IC  + I P  +V +L E ++  +R  +
Sbjct: 1   MARIAGVNIPVNKHIVIGLRSIYGVGQTTAQKICADVNIDPTTKVRELTEEQLEALRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +++EGDLRR V MNIKRLMD+GCYRG+RHRR LP+RGQRT  NARTRK
Sbjct: 61  TK-FKIEGDLRRDVTMNIKRLMDMGCYRGIRHRRSLPLRGQRTKNNARTRK 110


>gi|297537553|ref|YP_003673322.1| 30S ribosomal protein S13 [Methylotenera sp. 301]
 gi|297256900|gb|ADI28745.1| 30S ribosomal protein S13 [Methylotenera sp. 301]
          Length = 120

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I GIG  ++Q IC    +    ++  L +++V ++R  +
Sbjct: 1   MARIAGVNIPNNKHADVALTAIFGIGRVTAQKICAAAGVLATTKMKDLNDADVDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AKE-KVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRK 110


>gi|261867276|ref|YP_003255198.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412608|gb|ACX81979.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|301155352|emb|CBW14818.1| 30S ribosomal subunit protein S13 [Haemophilus parainfluenzae T3T1]
          Length = 118

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|260102379|ref|ZP_05752616.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075]
 gi|260083823|gb|EEW67943.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075]
 gi|323465846|gb|ADX69533.1| 30S ribosomal protein S13 [Lactobacillus helveticus H10]
 gi|328463388|gb|EGF35061.1| 30S ribosomal protein S13 [Lactobacillus helveticus MTCC 5463]
          Length = 116

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|70725827|ref|YP_252741.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435]
 gi|82581615|sp|Q4L890|RS13_STAHJ RecName: Full=30S ribosomal protein S13
 gi|68446551|dbj|BAE04135.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435]
          Length = 121

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|269218965|ref|ZP_06162819.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212076|gb|EEZ78416.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 123

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI+GIG   S +      I P+ RV  L E +++ +++ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIYGIGRTRSAETLAATGISPDVRVRDLTEDQLVALKKHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DENYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|315037554|ref|YP_004031122.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112]
 gi|325956027|ref|YP_004286637.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC]
 gi|312275687|gb|ADQ58327.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112]
 gi|325332592|gb|ADZ06500.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC]
 gi|327182850|gb|AEA31297.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1118]
          Length = 116

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDTTAKKICADAGVSEDVRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|167945793|ref|ZP_02532867.1| 30S ribosomal protein S13 [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 118

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  + AL  I+G+G   +  IC    I P  ++ +L E+++  IR  +
Sbjct: 1   MARIAGVNIPDRKHAIIALTSIYGVGRTRAAGICEATGIAPSTKILELSEAQLEAIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGC RG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMNIKRLMDLGCNRGIRHRRGLPLRGQRTKTNARTRK 110


>gi|160941045|ref|ZP_02088383.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435994|gb|EDP13761.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC
           BAA-613]
          Length = 122

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 77/109 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I     + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASSNRILTAAGVNPDTRVKDLTDDEVKKLANTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART
Sbjct: 61  AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109


>gi|161506896|ref|YP_001576850.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571]
 gi|172048386|sp|A8YXM8|RS13_LACH4 RecName: Full=30S ribosomal protein S13
 gi|160347885|gb|ABX26559.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571]
          Length = 116

 Score =  127 bits (318), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGNATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|13507928|ref|NP_109877.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae M129]
 gi|2500457|sp|Q50297|RS13_MYCPN RecName: Full=30S ribosomal protein S13
 gi|1215699|gb|AAC43692.1| RpsM [Mycoplasma pneumoniae]
 gi|1674347|gb|AAB96290.1| ribosomal protein S13 [Mycoplasma pneumoniae M129]
 gi|301633191|gb|ADK86745.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae FH]
          Length = 124

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KR+  AL YI GIG   SQ I  +  I P++RV  L E E + IR  +
Sbjct: 1   MARILGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFVAIRN-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EGDLRR +A+NIK L ++G +RGLRHR+ LPVRGQRT TNARTRK
Sbjct: 60  ASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRTNARTRK 110


>gi|15639203|ref|NP_218650.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025444|ref|YP_001933216.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14]
 gi|6094154|sp|O83240|RS13_TREPA RecName: Full=30S ribosomal protein S13
 gi|226712800|sp|B2S2F8|RS13_TREPS RecName: Full=30S ribosomal protein S13
 gi|3322479|gb|AAC65199.1| ribosomal protein S13 (rpsM) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018019|gb|ACD70637.1| ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14]
 gi|291059615|gb|ADD72350.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 121

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GI   S++ IC K  I     ++ L + E+  +R  I
Sbjct: 1   MARIAGVDLPN-KHVSVALTYIYGISRSSARTICEKARISSACLINDLSQDELAVVRAII 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK
Sbjct: 60  DREYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRK 110


>gi|13357815|ref|NP_078089.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971971|ref|ZP_02554248.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|168282409|ref|ZP_02690076.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|168308562|ref|ZP_02691237.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|170762081|ref|YP_001752338.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|32363424|sp|Q9PQN6|RS13_UREPA RecName: Full=30S ribosomal protein S13
 gi|189044304|sp|B1AIP4|RS13_UREP2 RecName: Full=30S ribosomal protein S13
 gi|11276601|pir||H82917 ribosomal protein S13 UU255 [imported] - Ureaplasma urealyticum
 gi|6899225|gb|AAF30664.1|AE002122_33 ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827658|gb|ACA32920.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902711|gb|EDT49000.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675722|gb|EDT87627.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700675|gb|EDU18957.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 132

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 82/118 (69%), Gaps = 7/118 (5%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57
           MARI GV+IP  KRVV +L YI GIG  +SQ I     I    RV  L + ++ +IR   
Sbjct: 1   MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60

Query: 58  ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +A  +  Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRK 118


>gi|256831851|ref|YP_003160578.1| 30S ribosomal protein S13 [Jonesia denitrificans DSM 20603]
 gi|256685382|gb|ACV08275.1| ribosomal protein S13 [Jonesia denitrificans DSM 20603]
          Length = 124

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+G+G   +Q       I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEVALTYIYGVGRTRAQQTLEATGISPDVRVKDLGDTELVALRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|37528522|ref|NP_931867.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|253991667|ref|YP_003043023.1| 30S ribosomal protein S13 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|81418034|sp|Q7MYH2|RS13_PHOLL RecName: Full=30S ribosomal protein S13
 gi|36787960|emb|CAE17077.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|253783117|emb|CAQ86282.1| 30s ribosomal subunit protein s13 [Photorhabdus asymbiotica]
          Length = 118

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAEHVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|212697277|ref|ZP_03305405.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848813|ref|ZP_08170323.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|212675726|gb|EEB35333.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480457|gb|EGC83519.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 113

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  S+Q+I  K  I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY +EGDLRR V+MNI+ L ++ CYRGLRH++GLPVRGQ T  NARTRK
Sbjct: 61  D-DYTIEGDLRREVSMNIRNLREINCYRGLRHKKGLPVRGQNTKNNARTRK 110


>gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206577841|ref|YP_002236301.1| ribosomal protein S13 [Klebsiella pneumoniae 342]
 gi|238896795|ref|YP_002921540.1| 30S ribosomal protein S13 [Klebsiella pneumoniae NTUH-K2044]
 gi|288933288|ref|YP_003437347.1| 30S ribosomal protein S13 [Klebsiella variicola At-22]
 gi|166231913|sp|A6TEV1|RS13_KLEP7 RecName: Full=30S ribosomal protein S13
 gi|226712749|sp|B5XNB4|RS13_KLEP3 RecName: Full=30S ribosomal protein S13
 gi|150957055|gb|ABR79085.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206566899|gb|ACI08675.1| ribosomal protein S13 [Klebsiella pneumoniae 342]
 gi|238549122|dbj|BAH65473.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|288888017|gb|ADC56335.1| 30S ribosomal protein S13 [Klebsiella variicola At-22]
          Length = 118

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC +  I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|254785101|ref|YP_003072529.1| 30S ribosomal protein S13 [Teredinibacter turnerae T7901]
 gi|259494692|sp|C5BQ83|RS13_TERTT RecName: Full=30S ribosomal protein S13
 gi|237684688|gb|ACR11952.1| ribosomal protein S13 [Teredinibacter turnerae T7901]
          Length = 118

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y+ GIG  +++ IC    +    ++  L ++++ +IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVFGIGKTTAKQICAATGVAESTKISALDDAKMDEIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK
Sbjct: 61  AK-HTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRK 110


>gi|239623372|ref|ZP_04666403.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522338|gb|EEQ62204.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 122

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 78/109 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKKLATII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART
Sbjct: 61  AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109


>gi|121609263|ref|YP_997070.1| 30S ribosomal protein S13 [Verminephrobacter eiseniae EF01-2]
 gi|158706293|sp|A1WK95|RS13_VEREI RecName: Full=30S ribosomal protein S13
 gi|121553903|gb|ABM58052.1| SSU ribosomal protein S13P [Verminephrobacter eiseniae EF01-2]
          Length = 121

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC+   I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRNRARKICDASGIAYSKKIKDLTDGDLEKIRVQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ + +EGDLRR   MNIKRLMD+GCYRG RHRRGLPVRGQRT TNARTRK   KG  A 
Sbjct: 61  EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|29831494|ref|NP_826128.1| 30S ribosomal protein S13 [Streptomyces avermitilis MA-4680]
 gi|32363228|sp|P59756|RS13_STRAW RecName: Full=30S ribosomal protein S13
 gi|29608610|dbj|BAC72663.1| putative ribosomal protein S13 [Streptomyces avermitilis MA-4680]
          Length = 126

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ    +  + P  RV  L E E+++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQKTLAETGVNPNTRVRDLSEEELVRIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +++ EGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNFKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|282898336|ref|ZP_06306327.1| Ribosomal protein S13 [Raphidiopsis brookii D9]
 gi|281196867|gb|EFA71772.1| Ribosomal protein S13 [Raphidiopsis brookii D9]
          Length = 126

 Score =  126 bits (317), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 75/101 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG + SQDI     + P+ RV  L ++++  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 101


>gi|119029440|gb|ABL59937.1| 30S ribosomal protein S13 [uncultured bacterium]
          Length = 119

 Score =  126 bits (317), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 81/116 (69%), Gaps = 3/116 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVNIP  K V   L  I+GIG  S+  IC    + P+ +V  L E E+ +IR  I
Sbjct: 1   MARIVGVNIPVKKHVEIGLTSIYGIGRVSASKICQVAGVNPQTKVGSLTEEELDKIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + Y  EGDLRR VAMN+KRL+++G YRGLRHRRGLPVRGQRT TNARTRK  GKG
Sbjct: 61  NK-YTTEGDLRREVAMNVKRLIEIGAYRGLRHRRGLPVRGQRTKTNARTRK--GKG 113


>gi|33152932|ref|NP_874285.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP]
 gi|71153725|sp|Q7VKF5|RS13_HAEDU RecName: Full=30S ribosomal protein S13
 gi|33149157|gb|AAP96674.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP]
          Length = 118

 Score =  126 bits (317), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICVATGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  SK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|229917333|ref|YP_002885979.1| ribosomal protein S13 [Exiguobacterium sp. AT1b]
 gi|259494678|sp|C4KZM1|RS13_EXISA RecName: Full=30S ribosomal protein S13
 gi|229468762|gb|ACQ70534.1| ribosomal protein S13 [Exiguobacterium sp. AT1b]
          Length = 121

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L YI+GIG   +Q+I     +  E R   L E E+ +IR+AI
Sbjct: 1   MARIAGVDIPREKRIVISLTYIYGIGKTKAQEILKAANVSEETRTRDLTEDELNRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ T  N+RTRK
Sbjct: 61  D-GIKVEGDLRREVSLNIKRLIEIGAYRGIRHRRSLPVRGQNTKNNSRTRK 110


>gi|223042524|ref|ZP_03612573.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14]
 gi|242371873|ref|ZP_04817447.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1]
 gi|314934274|ref|ZP_07841633.1| 30S ribosomal protein S13 [Staphylococcus caprae C87]
 gi|222444187|gb|EEE50283.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14]
 gi|242350380|gb|EES41981.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1]
 gi|313652204|gb|EFS15967.1| 30S ribosomal protein S13 [Staphylococcus caprae C87]
          Length = 121

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|153871950|ref|ZP_02000983.1| Ribosomal protein S13 [Beggiatoa sp. PS]
 gi|152071586|gb|EDN69019.1| Ribosomal protein S13 [Beggiatoa sp. PS]
          Length = 118

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+   K  +  L  I+GIG K ++ IC   +I P  ++  L +  +  +R  +
Sbjct: 1   MARIAGINLSGHKHTIIGLTSIYGIGRKLAEKICEATSIDPSMKIKDLSDKNLETLRHEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR VAMNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-YDVEGDLRREVAMNIKRLMDLGCYRGMRHRRGLPLRGQRTRTNARTRK 110


>gi|300362366|ref|ZP_07058542.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03]
 gi|300353357|gb|EFJ69229.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03]
          Length = 115

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    I  + R + L   +  ++R  +
Sbjct: 1   MARIAGVDLPRNKRVVVALTYIYGIGESTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|288919687|ref|ZP_06414014.1| ribosomal protein S13 [Frankia sp. EUN1f]
 gi|288348876|gb|EFC83126.1| ribosomal protein S13 [Frankia sp. EUN1f]
          Length = 126

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S++      + P+ RV  L + EV ++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSKETLAATGVNPDTRVRDLTDEEVQKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|90416838|ref|ZP_01224767.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207]
 gi|90331185|gb|EAS46429.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207]
          Length = 118

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y+ GIG  +++ IC  + I  + ++  L E+++  +R A+
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVFGIGRPTARKICADVGIAEDTKIAALDEAQLDLLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             + +VEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GTN-EVEGDLRRENSMNIKRLMDLGCYRGLRHRRNLPVRGQRTKTNARTRK 110


>gi|311070789|ref|YP_003975712.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942]
 gi|310871306|gb|ADP34781.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942]
          Length = 121

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|59710866|ref|YP_203642.1| 30S ribosomal protein S13 [Vibrio fischeri ES114]
 gi|197333946|ref|YP_002155018.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11]
 gi|75354725|sp|Q5E892|RS13_VIBF1 RecName: Full=30S ribosomal protein S13
 gi|59478967|gb|AAW84754.1| 30S ribosomal subunit protein S13 [Vibrio fischeri ES114]
 gi|197315436|gb|ACH64883.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11]
          Length = 118

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L + ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELNDEQIDILRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|255324776|ref|ZP_05365890.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum
           SK141]
 gi|311740033|ref|ZP_07713867.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255298251|gb|EET77554.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum
           SK141]
 gi|311305106|gb|EFQ81175.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 122

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 111


>gi|329118618|ref|ZP_08247322.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465353|gb|EGF11634.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200]
          Length = 120

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGNSRAKLICEMTGIIPSTKVKDLDESQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRK 110


>gi|317505826|ref|ZP_07963671.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
 gi|316255908|gb|EFV15133.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
          Length = 124

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     + P+ R   L + +V  +R+ I
Sbjct: 1   MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDGDVAVLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|58336653|ref|YP_193238.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM]
 gi|227903211|ref|ZP_04021016.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796]
 gi|75358065|sp|Q5FM67|RS13_LACAC RecName: Full=30S ribosomal protein S13
 gi|58253970|gb|AAV42207.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM]
 gi|227869016|gb|EEJ76437.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796]
          Length = 116

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|296282605|ref|ZP_06860603.1| 30S ribosomal protein S13 [Citromicrobium bathyomarinum JL354]
          Length = 108

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/105 (60%), Positives = 77/105 (73%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YIHGIG   + +I +KL I  + RV  L + EV++IR+ I++++ VEGDLRR  AMN
Sbjct: 4   ALTYIHGIGRTKAVEIADKLGIDHKTRVQDLTDEEVLRIRETIDEEHTVEGDLRRQTAMN 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           IKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +K+
Sbjct: 64  IKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGKKK 108


>gi|126666791|ref|ZP_01737768.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17]
 gi|126628836|gb|EAZ99456.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17]
          Length = 118

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHVVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLTDEQLESLRTDV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  IKG-SVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110


>gi|145636642|ref|ZP_01792309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH]
 gi|145270168|gb|EDK10104.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH]
          Length = 118

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICVAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|221307954|ref|ZP_03589801.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312275|ref|ZP_03594080.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317209|ref|ZP_03598503.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321472|ref|ZP_03602766.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767034|ref|NP_388022.2| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|321313813|ref|YP_004206100.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5]
 gi|1173195|sp|P20282|RS13_BACSU RecName: Full=30S ribosomal protein S13; AltName: Full=BS14
 gi|1044989|gb|AAB06824.1| ribosomal protein S13 [Bacillus subtilis]
 gi|225184661|emb|CAB11917.2| ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168]
 gi|291482513|dbj|BAI83588.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. natto BEST195]
 gi|320020087|gb|ADV95073.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5]
          Length = 121

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|39938711|ref|NP_950477.1| 30S ribosomal protein S13 [Onion yellows phytoplasma OY-M]
 gi|81402506|sp|Q6YQZ7|RS13_ONYPE RecName: Full=30S ribosomal protein S13
 gi|39721820|dbj|BAD04310.1| ribosomal protein S13 [Onion yellows phytoplasma OY-M]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K S  I N+L I    RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELNIDQNIRVKNLTEQQLSALRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K
Sbjct: 61  TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVK 110


>gi|119358167|ref|YP_912811.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides DSM 266]
 gi|158706222|sp|A1BJ10|RS13_CHLPD RecName: Full=30S ribosomal protein S13
 gi|119355516|gb|ABL66387.1| SSU ribosomal protein S13P [Chlorobium phaeobacteroides DSM 266]
          Length = 125

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S++ I  +  I PER++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTSAKSILQRAGIAPERKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DY+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  DYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110


>gi|228474843|ref|ZP_04059574.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119]
 gi|314935855|ref|ZP_07843207.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271506|gb|EEK12874.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119]
 gi|313656420|gb|EFS20160.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis
           C80]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DG-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|154684659|ref|YP_001419820.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens FZB42]
 gi|296333138|ref|ZP_06875592.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672841|ref|YP_003864512.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|308172032|ref|YP_003918737.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7]
 gi|166231898|sp|A7Z0R3|RS13_BACA2 RecName: Full=30S ribosomal protein S13
 gi|154350510|gb|ABS72589.1| RpsM [Bacillus amyloliquefaciens FZB42]
 gi|296149754|gb|EFG90649.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411084|gb|ADM36202.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|307604896|emb|CBI41267.1| ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7]
 gi|328551842|gb|AEB22334.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens TA208]
 gi|328910099|gb|AEB61695.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens LL3]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|160902231|ref|YP_001567812.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
 gi|189044285|sp|A9BFZ3|RS13_PETMO RecName: Full=30S ribosomal protein S13
 gi|160359875|gb|ABX31489.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K +   L YI+GIG K++ DI N L I P +R  +L + E+ ++   I
Sbjct: 1   MARILGVEVPDNKALFVGLTYIYGIGRKTALDILNNLEIDPNKRAKELTDDEISRLSHHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y+VEG+LR+ +  NIKRL+D+G YRG RH+ GLPVRGQ+TH+NARTRK
Sbjct: 61  NENYKVEGELRQEINKNIKRLIDIGSYRGKRHKAGLPVRGQKTHSNARTRK 111


>gi|199598856|ref|ZP_03212267.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001]
 gi|229552731|ref|ZP_04441456.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1]
 gi|258509458|ref|YP_003172209.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG]
 gi|258540656|ref|YP_003175155.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus Lc 705]
 gi|199590268|gb|EDY98363.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001]
 gi|229313937|gb|EEN79910.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1]
 gi|257149385|emb|CAR88358.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus GG]
 gi|257152332|emb|CAR91304.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus Lc 705]
 gi|259650737|dbj|BAI42899.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|142461|gb|AAA22215.1| ribosomal protein S13 [Bacillus subtilis]
          Length = 121

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGTYRGIRHRRGLPVRGQNSKNNARTRK 110


>gi|189347679|ref|YP_001944208.1| 30S ribosomal protein S13 [Chlorobium limicola DSM 245]
 gi|226712711|sp|B3EGW6|RS13_CHLL2 RecName: Full=30S ribosomal protein S13
 gi|189341826|gb|ACD91229.1| ribosomal protein S13 [Chlorobium limicola DSM 245]
          Length = 125

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I PER++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRTSAENILQRAGIAPERKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DY+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  DYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110


>gi|229821595|ref|YP_002883121.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333]
 gi|259494668|sp|C5C0G3|RS13_BEUC1 RecName: Full=30S ribosomal protein S13
 gi|229567508|gb|ACQ81359.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333]
          Length = 126

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   + D      I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLVGVDLPRDKRLEVALTYIYGVGRTRAADTLKATGISPDLRVKDLGDAEIVALRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYKIEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|119950852|gb|ABM09763.1| ribosomal protein S13p/S18e [Arthrobacter aurescens TC1]
          Length = 164

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L ++E++Q+R  I
Sbjct: 40  MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 99

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK
Sbjct: 100 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 150


>gi|310659477|ref|YP_003937198.1| 30S ribosomal protein S13 [Clostridium sticklandii DSM 519]
 gi|308826255|emb|CBH22293.1| 30S ribosomal subunit protein S13 [Clostridium sticklandii]
          Length = 122

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+  L YI GIG  +S  I +   I    R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPREKRVIIGLTYIFGIGKNTSAQILSATGINESTRIKDLTEEEVNLLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK
Sbjct: 61  D-NYNVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRK 110


>gi|117619798|ref|YP_854864.1| 30S ribosomal protein S13 [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|145300913|ref|YP_001143754.1| 30S ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|330827904|ref|YP_004390856.1| 30S ribosomal protein S13 [Aeromonas veronii B565]
 gi|158706212|sp|A0KF42|RS13_AERHH RecName: Full=30S ribosomal protein S13
 gi|158706213|sp|A4SSY4|RS13_AERS4 RecName: Full=30S ribosomal protein S13
 gi|117561205|gb|ABK38153.1| ribosomal protein S13p/S18e [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|142853685|gb|ABO92006.1| ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|328803040|gb|AEB48239.1| 30S ribosomal protein S13 [Aeromonas veronii B565]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ IC    I    ++  L E+++  +R+ +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGRTRSKAICAAAGIAENVKIKDLDEAQIESLREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRRQISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|42526301|ref|NP_971399.1| 30S ribosomal protein S13 [Treponema denticola ATCC 35405]
 gi|81570369|sp|Q73PL0|RS13_TREDE RecName: Full=30S ribosomal protein S13
 gi|41816413|gb|AAS11280.1| ribosomal protein S13 [Treponema denticola ATCC 35405]
 gi|325473244|gb|EGC76439.1| 30S ribosomal protein S13 [Treponema denticola F0402]
          Length = 121

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  +L YI+GI   S+  IC    + P ++++ L E+E+  IR+ I
Sbjct: 1   MARIAGVDLPN-KHVNVSLTYIYGISTSSANKICEATKVDPMKKMNDLDEAELAAIREVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           +++Y+VEG LR  VA+NIKRL D+GCYRG RHR+GLPVRGQRT TNARTR
Sbjct: 60  DREYKVEGRLRTEVALNIKRLQDIGCYRGQRHRKGLPVRGQRTRTNARTR 109


>gi|262370556|ref|ZP_06063881.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046]
 gi|262314356|gb|EEY95398.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILAAVGIAPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|237653973|ref|YP_002890287.1| 30S ribosomal protein S13 [Thauera sp. MZ1T]
 gi|237625220|gb|ACR01910.1| ribosomal protein S13 [Thauera sp. MZ1T]
          Length = 120

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   I    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGIVRSVKIKDLTESDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110


>gi|123444076|ref|YP_001008046.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238752669|ref|ZP_04614140.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380]
 gi|238754194|ref|ZP_04615552.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473]
 gi|238758782|ref|ZP_04619956.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236]
 gi|238783186|ref|ZP_04627212.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970]
 gi|238788890|ref|ZP_04632680.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641]
 gi|238792957|ref|ZP_04636587.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909]
 gi|238797221|ref|ZP_04640722.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969]
 gi|332163239|ref|YP_004299816.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|158706295|sp|A1JS04|RS13_YERE8 RecName: Full=30S ribosomal protein S13
 gi|122091037|emb|CAL13920.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238703079|gb|EEP95622.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236]
 gi|238707690|gb|EEQ00050.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473]
 gi|238709096|gb|EEQ01343.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380]
 gi|238715982|gb|EEQ07968.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970]
 gi|238718858|gb|EEQ10673.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969]
 gi|238722917|gb|EEQ14567.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641]
 gi|238727811|gb|EEQ19335.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909]
 gi|318607723|emb|CBY29221.1| SSU ribosomal protein S13p (S18e) [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667469|gb|ADZ44113.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861832|emb|CBX72003.1| 30S ribosomal protein S13 [Yersinia enterocolitica W22703]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|290958126|ref|YP_003489308.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22]
 gi|260647652|emb|CBG70757.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22]
          Length = 126

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ+      + P+ RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEVALTYVFGIGRTLSQETLAATGVNPDTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|145596409|ref|YP_001160706.1| 30S ribosomal protein S13 [Salinispora tropica CNB-440]
 gi|189044293|sp|A4XBM1|RS13_SALTO RecName: Full=30S ribosomal protein S13
 gi|145305746|gb|ABP56328.1| SSU ribosomal protein S13P [Salinispora tropica CNB-440]
          Length = 126

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK
Sbjct: 61  ETNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRK 111


>gi|261415796|ref|YP_003249479.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372252|gb|ACX74997.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302328112|gb|ADL27313.1| ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 122

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ K V   L  I+G+G  ++  +C +L I   ++   L E E  +IR  +
Sbjct: 1   MARIAGVDLPKNKTVEYGLTAIYGVGLFTANKVCAQLGIDKNKKCDDLTEEEQGKIRHLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y VEG LR  V +NIKRL D+GCYRG+RHR+GLPVRGQR+ TNARTRK
Sbjct: 61  EDEYSVEGQLRAEVTLNIKRLQDIGCYRGIRHRKGLPVRGQRSRTNARTRK 111


>gi|148652259|ref|YP_001279352.1| 30S ribosomal protein S13 [Psychrobacter sp. PRwf-1]
 gi|172048488|sp|A5WCL1|RS13_PSYWF RecName: Full=30S ribosomal protein S13
 gi|148571343|gb|ABQ93402.1| SSU ribosomal protein S13P [Psychrobacter sp. PRwf-1]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +++ I + + I P  ++ QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTTAKKILDTVGIAPTTKISQLDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK
Sbjct: 61  -GNYMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRK 110


>gi|322831094|ref|YP_004211121.1| 30S ribosomal protein S13 [Rahnella sp. Y9602]
 gi|321166295|gb|ADW71994.1| 30S ribosomal protein S13 [Rahnella sp. Y9602]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQSICAASGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FIVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|289641141|ref|ZP_06473309.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata]
 gi|289509082|gb|EFD30013.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata]
          Length = 126

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S +      + P+ RV  L + E++++R+ I
Sbjct: 1   MARLSGVDLPRDKRVEIALTYIFGIGRSRSLETLAATGVNPDTRVQDLTDEEIVRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDL R V  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DANYRVEGDLHREVRQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|297201754|ref|ZP_06919151.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083]
 gi|197710871|gb|EDY54905.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083]
          Length = 126

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ    +  I P  RV  L E E++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEVALTYVFGIGRTLSQLTLAETGINPNTRVRDLSEEELVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNLKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|119899683|ref|YP_934896.1| 30S ribosomal protein S13 [Azoarcus sp. BH72]
 gi|158706334|sp|A1KB04|RS13_AZOSB RecName: Full=30S ribosomal protein S13
 gi|119672096|emb|CAL96010.1| 30S ribosomal protein S13 [Azoarcus sp. BH72]
          Length = 120

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   +    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGVVRSAKIKDLTESDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  GR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110


>gi|320540704|ref|ZP_08040322.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson]
 gi|320029234|gb|EFW11295.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson]
          Length = 107

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 1/108 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNAR
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNAR 107


>gi|262377290|ref|ZP_06070514.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145]
 gi|262307743|gb|EEY88882.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +S+ I     I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTSKAILAAAGIAPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|171060596|ref|YP_001792945.1| 30S ribosomal protein S13 [Leptothrix cholodnii SP-6]
 gi|226712756|sp|B1Y8B4|RS13_LEPCP RecName: Full=30S ribosomal protein S13
 gi|170778041|gb|ACB36180.1| ribosomal protein S13 [Leptothrix cholodnii SP-6]
          Length = 121

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+G+G  ++Q IC    I   ++V  L +S++ +IR+ +
Sbjct: 1   MARIAGINIPPHKHAEIGLTSIYGVGRTTAQKICEACGIAYNKKVKDLDDSDLEKIREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TN+RTRK   KG  A 
Sbjct: 61  GR-LTIEGDLRREISINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNSRTRKGPKKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|308048013|ref|YP_003911579.1| 30S ribosomal protein S13P [Ferrimonas balearica DSM 9799]
 gi|307630203|gb|ADN74505.1| SSU ribosomal protein S13P [Ferrimonas balearica DSM 9799]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC +  I  + +   L E+ + ++R+ +
Sbjct: 1   MARIAGINIPEHKHAVVALTAIFGIGQTRAKAICVEAGIAEDVKFKDLDEATIDKVREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + VEGDLRR ++MNIKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GQ-FTVEGDLRREISMNIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|256844453|ref|ZP_05549939.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN]
 gi|262047175|ref|ZP_06020133.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US]
 gi|293380400|ref|ZP_06626471.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1]
 gi|295692183|ref|YP_003600793.1| 30S ribosomal protein s13 [Lactobacillus crispatus ST1]
 gi|256613531|gb|EEU18734.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN]
 gi|260572420|gb|EEX28982.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US]
 gi|290923083|gb|EFE00015.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1]
 gi|295030289|emb|CBL49768.1| 30S ribosomal protein S13 [Lactobacillus crispatus ST1]
          Length = 116

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|256544530|ref|ZP_05471903.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170]
 gi|256399855|gb|EEU13459.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170]
          Length = 113

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  S+Q+I  K  I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY +EGDLRR V+MNI+ L ++ CYRG+RH+RGLPVRGQ T  NARTRK
Sbjct: 61  D-DYTIEGDLRREVSMNIRNLREINCYRGIRHKRGLPVRGQNTKNNARTRK 110


>gi|303234802|ref|ZP_07321428.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4]
 gi|302494143|gb|EFL53923.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4]
          Length = 116

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110


>gi|167767779|ref|ZP_02439832.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1]
 gi|317497070|ref|ZP_07955397.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710518|gb|EDS21097.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1]
 gi|291558880|emb|CBL37680.1| 30S ribosomal protein S13 [butyrate-producing bacterium SSC/2]
 gi|316895615|gb|EFV17770.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 122

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S++ I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLSSAKRILAEANVDPDTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                VEGDLRR +A+NIKRL ++GCYRG RHR+GLP RGQ+T TNARTRK
Sbjct: 61  NDTQVVEGDLRREIALNIKRLKEIGCYRGKRHRQGLPCRGQKTKTNARTRK 111


>gi|134096299|ref|YP_001101374.1| 30S ribosomal protein S13 [Herminiimonas arsenicoxydans]
 gi|158706238|sp|A4G9R6|RS13_HERAR RecName: Full=30S ribosomal protein S13
 gi|133740202|emb|CAL63253.1| 30S ribosomal subunit protein S13 [Herminiimonas arsenicoxydans]
          Length = 121

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   +Q IC+   +   ++V  L +SE+ ++R  I
Sbjct: 1   MARIAGVNVPNHQHTVIGLTAIYGIGRPRAQKICDATGVLTTKKVKDLDDSELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK
Sbjct: 61  AK-FIVEGDLRREISMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRK 110


>gi|159039808|ref|YP_001539061.1| 30S ribosomal protein S13 [Salinispora arenicola CNS-205]
 gi|189044292|sp|A8M503|RS13_SALAI RecName: Full=30S ribosomal protein S13
 gi|157918643|gb|ABW00071.1| ribosomal protein S13 [Salinispora arenicola CNS-205]
          Length = 126

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRK 111


>gi|198282661|ref|YP_002218982.1| 30S ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667353|ref|YP_002424854.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226712683|sp|B7J4A1|RS13_ACIF2 RecName: Full=30S ribosomal protein S13
 gi|226712684|sp|B5EM96|RS13_ACIF5 RecName: Full=30S ribosomal protein S13
 gi|198247182|gb|ACH82775.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519566|gb|ACK80152.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 118

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 82/116 (70%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K++  AL YI+GIG   ++ + +   I  + RV  + E E+ +IR  +
Sbjct: 1   MARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRVKDISEPELERIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK   K 
Sbjct: 61  AK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKS 115


>gi|169823876|ref|YP_001691487.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328]
 gi|226712738|sp|B0RZT3|RS13_FINM2 RecName: Full=30S ribosomal protein S13
 gi|167830681|dbj|BAG07597.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328]
          Length = 116

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110


>gi|56460994|ref|YP_156275.1| 30S ribosomal protein S13 [Idiomarina loihiensis L2TR]
 gi|81362955|sp|Q5QXV5|RS13_IDILO RecName: Full=30S ribosomal protein S13
 gi|56180004|gb|AAV82726.1| Ribosomal protein S13 [Idiomarina loihiensis L2TR]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+G+G   SQ I     I  + ++  L E ++  +R A+
Sbjct: 1   MARIAGINVPDNKHAVIALTAIYGVGRTRSQQILAATGIAEDTKIGSLSEDKLDALRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  SK-FAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|209693945|ref|YP_002261873.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238]
 gi|208007896|emb|CAQ78026.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I   + I  + ++ +L + ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKISELNDEQIDILRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|42518453|ref|NP_964383.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533]
 gi|116628986|ref|YP_814158.1| 30S ribosomal protein S13 [Lactobacillus gasseri ATCC 33323]
 gi|227888829|ref|ZP_04006634.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200]
 gi|238853459|ref|ZP_04643837.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4]
 gi|268318875|ref|YP_003292531.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785]
 gi|282852673|ref|ZP_06262015.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1]
 gi|311111216|ref|ZP_07712613.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22]
 gi|81668269|sp|Q74L66|RS13_LACJO RecName: Full=30S ribosomal protein S13
 gi|122274016|sp|Q046A2|RS13_LACGA RecName: Full=30S ribosomal protein S13
 gi|41582738|gb|AAS08349.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533]
 gi|116094568|gb|ABJ59720.1| SSU ribosomal protein S13P [Lactobacillus gasseri ATCC 33323]
 gi|227850666|gb|EEJ60752.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200]
 gi|238833899|gb|EEQ26158.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4]
 gi|262397250|emb|CAX66264.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785]
 gi|282556415|gb|EFB62035.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1]
 gi|311066370|gb|EFQ46710.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22]
 gi|329666716|gb|AEB92664.1| 30S ribosomal protein S13 [Lactobacillus johnsonii DPC 6026]
          Length = 115

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    I  + R + L   +  ++R  +
Sbjct: 1   MARIAGVDLPRNKRVVVALTYIYGIGEPTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|269122556|ref|YP_003310733.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
 gi|268616434|gb|ACZ10802.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
          Length = 121

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  ++  I  K  +    +V  L E +V QIR  +
Sbjct: 1   MARIAGVDIPRNKRVEISLTYIFGIGRSTANKILEKANVDKNIKVKDLSEEQVGQIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ +++EG+LR+ + +NIKRLMD+  YRGLRHR GLPVRGQ+T TNARTRK   K  VA+
Sbjct: 61  DE-FKIEGELRKEIRLNIKRLMDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKAAVAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 [Enterobacter sp. 638]
 gi|145320239|gb|ABP62386.1| SSU ribosomal protein S13P [Enterobacter sp. 638]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|71278025|ref|YP_267373.1| 30S ribosomal protein S13 [Colwellia psychrerythraea 34H]
 gi|91207696|sp|Q488Z1|RS13_COLP3 RecName: Full=30S ribosomal protein S13
 gi|71143765|gb|AAZ24238.1| ribosomal protein S13 [Colwellia psychrerythraea 34H]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I+GIG   ++ IC    I    ++ +L E+++  +R  +
Sbjct: 1   MARIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAESTKISELDEAKIDLLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  DK-FTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|329893621|ref|ZP_08269755.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088]
 gi|328923548|gb|EGG30860.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   ++++C    I  + ++  L E+++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGKTKAKELCAATNIAEDTKIGDLSEAQMDELRGKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK
Sbjct: 61  GE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRK 110


>gi|313123133|ref|YP_004033392.1| 30S ribosomal protein s13 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279696|gb|ADQ60415.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 116

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++++IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|260584440|ref|ZP_05852187.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633]
 gi|260157958|gb|EEW93027.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633]
          Length = 121

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +S+ +     +  + RV  L   E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGVTTSKQVLAAANVSEDTRVRDLSNDELDRIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|227487077|ref|ZP_03917393.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227541759|ref|ZP_03971808.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227093151|gb|EEI28463.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182465|gb|EEI63437.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 122

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAKKLLEETGISPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  EASWKVEGDLRRQVAADIRRKIEIGCYQGMRHRRGLPVHGQRTKTNARTRK 111


>gi|227115250|ref|ZP_03828906.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328927|ref|ZP_03832951.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690161|ref|YP_003019351.1| ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259494686|sp|C6DFS6|RS13_PECCP RecName: Full=30S ribosomal protein S13
 gi|251756739|gb|ACT14815.1| ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 118

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|326803056|ref|YP_004320874.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650287|gb|AEA00470.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 121

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 86/119 (72%), Gaps = 3/119 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  +++ IC    +  + RV  L   E+ ++R+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKATAEKICEACDVDQDTRVRDLTNDELDRLRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++  +VEGDLRR + M+IKRL ++G YRG+RHRRGLPVRGQ T  NARTRK  GK G+A
Sbjct: 61  DK-IKVEGDLRRDINMDIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRK--GKRGLA 116


>gi|161485633|ref|YP_925063.2| 30S ribosomal protein S13 [Nocardioides sp. JS614]
 gi|158706369|sp|A1SNJ1|RS13_NOCSJ RecName: Full=30S ribosomal protein S13
          Length = 124

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +Q +     + P+ RVHQL + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++++EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 111


>gi|269469223|gb|EEZ80754.1| ribosomal protein S13 [uncultured SUP05 cluster bacterium]
          Length = 117

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   ++ IC +L I P  +  +L E ++  IR A+
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAKAICAELKIDPATKTAELSEDQLELIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + ++VEGDLRR VAM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK
Sbjct: 61  AK-FEVEGDLRRQVAMDIKRLKDLGCYRGIRHRKSLPLRGQRTKTNARTRK 110


>gi|297588216|ref|ZP_06946860.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516]
 gi|297574905|gb|EFH93625.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516]
          Length = 116

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRTEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRK 110


>gi|110833280|ref|YP_692139.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2]
 gi|123050727|sp|Q0VSI1|RS13_ALCBS RecName: Full=30S ribosomal protein S13
 gi|110646391|emb|CAL15867.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   ++ IC    I    +V +L   ++  IR  +
Sbjct: 1   MARIAGVNIPENKHTVISLTYIFGIGRTRAESICATTGIEQTAKVRELTGEQLDAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRK 110


>gi|119946249|ref|YP_943929.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37]
 gi|119947104|ref|YP_944784.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37]
 gi|158706266|sp|A1SXW5|RS13_PSYIN RecName: Full=30S ribosomal protein S13
 gi|119864853|gb|ABM04330.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37]
 gi|119865708|gb|ABM05185.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I GIG   SQ IC    I    ++  L E+++  +R  +
Sbjct: 1   MARIAGINVPDHKHAVIALTAIFGIGKTRSQIICAASGIAESTKLKDLDETQIEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK
Sbjct: 61  AT-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRK 110


>gi|213964843|ref|ZP_03393042.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46]
 gi|213952379|gb|EEB63762.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   + ++  K  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARANELLEKTGISPDLRTDALTDEQVAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|325068057|ref|ZP_08126730.1| 30S ribosomal protein S13 [Actinomyces oris K20]
          Length = 124

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I
Sbjct: 1   MARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK
Sbjct: 61  DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 111


>gi|19551796|ref|NP_599798.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|62389451|ref|YP_224853.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|145294732|ref|YP_001137553.1| 30S ribosomal protein S13 [Corynebacterium glutamicum R]
 gi|32363343|sp|Q8NSV6|RS13_CORGL RecName: Full=30S ribosomal protein S13
 gi|158706225|sp|A4QBQ4|RS13_CORGB RecName: Full=30S ribosomal protein S13
 gi|21323326|dbj|BAB97954.1| Ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|41324785|emb|CAF19267.1| RIBOSOMAL PROTEIN S13 [Corynebacterium glutamicum ATCC 13032]
 gi|140844652|dbj|BAF53651.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLEETGISPDLRTDNLTDEQIAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 111


>gi|291549396|emb|CBL25658.1| 30S ribosomal protein S13 [Ruminococcus torques L2-14]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 78/109 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S++ I     + P+ RV  L   EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSAERILKDAGVNPDTRVRDLTSEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 61  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 109


>gi|38233155|ref|NP_938922.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae NCTC 13129]
 gi|81401847|sp|Q6NJ66|RS13_CORDI RecName: Full=30S ribosomal protein S13
 gi|38199414|emb|CAE49057.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLEETGISPDLRTDNLTDEQVSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|313683418|ref|YP_004061156.1| SSU ribosomal protein s13p [Sulfuricurvum kujiense DSM 16994]
 gi|313156278|gb|ADR34956.1| SSU ribosomal protein S13P [Sulfuricurvum kujiense DSM 16994]
          Length = 123

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 79/112 (70%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  +S+ I +   +   +RV +L E E   I + I
Sbjct: 1   MARIAGVDLPKKKRLEYALTYIYGIGLHTSRKILDATGLDYNKRVFELSEDEAATIAKEI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                 VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK
Sbjct: 61  RSSGIAVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPCRGQKTKTNARTRK 112


>gi|238763712|ref|ZP_04624671.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638]
 gi|238698014|gb|EEP90772.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|253998038|ref|YP_003050101.1| 30S ribosomal protein S13 [Methylovorus sp. SIP3-4]
 gi|253984717|gb|ACT49574.1| ribosomal protein S13 [Methylovorus sp. SIP3-4]
          Length = 120

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G  +++ IC    +    ++  L ++EV ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIALTSIYGVGRNTAKQICLAAGVAGTAKIKDLNDAEVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRTKTNARTRK 110


>gi|328478179|gb|EGF48022.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus MTCC 5462]
          Length = 126

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|172040038|ref|YP_001799752.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
 gi|226712722|sp|B1VEX9|RS13_CORU7 RecName: Full=30S ribosomal protein S13
 gi|171851342|emb|CAQ04318.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLSDEQLAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENNWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|227530229|ref|ZP_03960278.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540]
 gi|227349904|gb|EEJ40195.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540]
          Length = 121

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG   +Q I     +  + RV  L   +  QIR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNTRAQKILKDAGVSEDIRVRDLTPEQEEQIRTQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q YQVEGDLRR V +NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DQ-YQVEGDLRREVTLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|297582475|ref|YP_003698255.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10]
 gi|297140932|gb|ADH97689.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10]
          Length = 121

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L Y+ GIG   +  I  +  +    RV  L E E+ +IR+ +
Sbjct: 1   MARVAGVDIPRDKRVVVSLTYVFGIGRSKAAQILTEAGVSENTRVRDLTEDELAKIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  D-GVKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|302205541|gb|ADL09883.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis C231]
 gi|308275777|gb|ADO25676.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis I19]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|300932969|ref|ZP_07148225.1| 30S ribosomal protein S13 [Corynebacterium resistens DSM 45100]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|11467401|ref|NP_043258.1| ribosomal protein S13 [Cyanophora paradoxa]
 gi|1350871|sp|P48137|RR13_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S13
 gi|1016202|gb|AAA81289.1| ribosomal protein S13 [Cyanophora paradoxa]
          Length = 126

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 76/101 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I +K+ + P+ RV  L ++ + Q+R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSKEILSKIELDPDTRVRDLPDNAIAQLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E DYQVEGDLRR  +MNIKRL D+GCYRG RHR  LPVRGQ
Sbjct: 61  ETDYQVEGDLRRFESMNIKRLADIGCYRGRRHRLNLPVRGQ 101


>gi|27468717|ref|NP_765354.1| 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228]
 gi|57867677|ref|YP_189370.1| 30S ribosomal protein S13 [Staphylococcus epidermidis RP62A]
 gi|242243971|ref|ZP_04798414.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144]
 gi|251812071|ref|ZP_04826544.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875366|ref|ZP_06284239.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135]
 gi|293368457|ref|ZP_06615081.1| ribosomal protein S13/S18 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32363310|sp|Q8CRI3|RS13_STAES RecName: Full=30S ribosomal protein S13
 gi|81673639|sp|Q5HM23|RS13_STAEQ RecName: Full=30S ribosomal protein S13
 gi|27316265|gb|AAO05440.1|AE016750_45 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228]
 gi|57638335|gb|AAW55123.1| ribosomal protein S13/S18 [Staphylococcus epidermidis RP62A]
 gi|242232604|gb|EES34916.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144]
 gi|251804405|gb|EES57062.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296131|gb|EFA88652.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135]
 gi|291317415|gb|EFE57837.1| ribosomal protein S13/S18 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|319400601|gb|EFV88826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis FRI909]
 gi|329731229|gb|EGG67599.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU144]
 gi|329736494|gb|EGG72762.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU028]
 gi|329737063|gb|EGG73318.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU045]
          Length = 121

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK
Sbjct: 61  DG-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRK 110


>gi|242278681|ref|YP_002990810.1| 30S ribosomal protein S13 [Desulfovibrio salexigens DSM 2638]
 gi|259494672|sp|C6C1A8|RS13_DESAD RecName: Full=30S ribosomal protein S13
 gi|242121575|gb|ACS79271.1| ribosomal protein S13 [Desulfovibrio salexigens DSM 2638]
          Length = 123

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+G+G  ++  I + + I    +   L   +V  IR+ +
Sbjct: 1   MARIAGVDLPKNKRLDIALTYIYGVGRTTALKILDTVGIDWTLKTDDLSGEQVNTIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR    +IKRLMD+GCYRGLRHRRGLPVRGQ + TNARTRK   +  ++R
Sbjct: 61  EDNYKVEGDLRRDQIADIKRLMDIGCYRGLRHRRGLPVRGQSSKTNARTRKGPRRSVMSR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83648830|ref|YP_437265.1| 30S ribosomal protein S13 [Hahella chejuensis KCTC 2396]
 gi|123530605|sp|Q2S934|RS13_HAHCH RecName: Full=30S ribosomal protein S13
 gi|83636873|gb|ABC32840.1| Ribosomal protein S13 [Hahella chejuensis KCTC 2396]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI+GIG  +S+ +C +  I P+ +V  L E ++  +R  I
Sbjct: 1   MARIAGVNIPDNKHTEVSLTYIYGIGRTTSRGLCERTGISPQAKVKDLSEEQLDVLRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V MNIKRL DLGCYRGLRHR  LPVRGQRT TNARTRK
Sbjct: 61  AK-MVVEGDLRREVQMNIKRLKDLGCYRGLRHRHSLPVRGQRTKTNARTRK 110


>gi|255319793|ref|ZP_05360998.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82]
 gi|262380326|ref|ZP_06073480.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164]
 gi|255303112|gb|EET82324.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82]
 gi|262297772|gb|EEY85687.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I     I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAAGITPTVKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|120402444|ref|YP_952273.1| 30S ribosomal protein S13 [Mycobacterium vanbaalenii PYR-1]
 gi|158706254|sp|A1T517|RS13_MYCVP RecName: Full=30S ribosomal protein S13
 gi|119955262|gb|ABM12267.1| SSU ribosomal protein S13P [Mycobacterium vanbaalenii PYR-1]
          Length = 124

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   SQ+I     I  + R   L + +V Q+R  I
Sbjct: 1   MARLMGVDLPRDKRMEIALTYIYGIGRTRSQEILEATGISRDMRTKDLTDDQVTQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|251787993|ref|YP_003002714.1| 30S ribosomal protein S13 [Dickeya zeae Ech1591]
 gi|271502224|ref|YP_003335250.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586]
 gi|307132817|ref|YP_003884833.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937]
 gi|247536614|gb|ACT05235.1| ribosomal protein S13 [Dickeya zeae Ech1591]
 gi|270345779|gb|ACZ78544.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586]
 gi|306530346|gb|ADN00277.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRSKSICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|269128488|ref|YP_003301858.1| 30S ribosomal protein S13 [Thermomonospora curvata DSM 43183]
 gi|268313446|gb|ACY99820.1| ribosomal protein S13 [Thermomonospora curvata DSM 43183]
          Length = 126

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 83/110 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +   +  +  + RVHQL + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVALTYIYGIGRTRALETLRQTGVNGDLRVHQLGDEELVKLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y+VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|325135171|gb|EGC57797.1| ribosomal protein S13p/S18e [Neisseria meningitidis M13399]
          Length = 120

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P+ +   L E+++  +R  I
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|311693292|gb|ADP96165.1| ribosomal protein S13, bacterial-type [marine bacterium HP15]
          Length = 118

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHAVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLSDEQLEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  GK-VSVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110


>gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183874|ref|ZP_06043295.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
 gi|254811143|sp|C3PL35|RS13_CORA7 RecName: Full=30S ribosomal protein S13
 gi|227453286|gb|ACP32039.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
          Length = 122

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAKELLEKTGISPDLRTDNLDDDQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 111


>gi|21674974|ref|NP_663039.1| 30S ribosomal protein S13 [Chlorobium tepidum TLS]
 gi|32363337|sp|Q8KAJ5|RS13_CHLTE RecName: Full=30S ribosomal protein S13
 gi|21648206|gb|AAM73381.1| ribosomal protein S13 [Chlorobium tepidum TLS]
          Length = 125

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 79/109 (72%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL Y++GIG  S+++I  K  + P++++ +L + E   IR+ I  
Sbjct: 2   RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y VEG+ R    ++IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110


>gi|156932258|ref|YP_001436174.1| 30S ribosomal protein S13 [Cronobacter sakazakii ATCC BAA-894]
 gi|260599618|ref|YP_003212189.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032]
 gi|156530512|gb|ABU75338.1| hypothetical protein ESA_00029 [Cronobacter sakazakii ATCC BAA-894]
 gi|260218795|emb|CBA34143.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032]
          Length = 118

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   +    + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAVGFAEDVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|300857806|ref|YP_003782789.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685260|gb|ADK28182.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 142

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 21  MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 80

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 81  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 131


>gi|182436602|ref|YP_001824321.1| 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326777224|ref|ZP_08236489.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1]
 gi|226712788|sp|B1W3Y2|RS13_STRGG RecName: Full=30S ribosomal protein S13
 gi|178465118|dbj|BAG19638.1| putative 30S ribosomal protein S13 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657557|gb|EGE42403.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1]
          Length = 126

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR V  NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|167957549|ref|ZP_02544623.1| 30S ribosomal protein S13 [candidate division TM7 single-cell
           isolate TM7c]
          Length = 128

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  K+V  +L YI+GIG K ++DI     I P  RV  L E+E  +IR  I
Sbjct: 1   MARISGVVIPSEKQVQISLTYIYGIGPKYARDILAAAKIEPTTRVKDLTEAEEQKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y  EGDL+R V  NIKRL D+  YRGLRH+ GLPVRGQRT TNARTRK
Sbjct: 61  DNNYTTEGDLQRLVTNNIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRK 111


>gi|302330096|gb|ADL20290.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis 1002]
          Length = 143

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 22  MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 81

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 82  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 132


>gi|238855092|ref|ZP_04645420.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3]
 gi|256852060|ref|ZP_05557447.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN]
 gi|260661371|ref|ZP_05862284.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN]
 gi|260664877|ref|ZP_05865728.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US]
 gi|297205065|ref|ZP_06922461.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16]
 gi|313472573|ref|ZP_07813062.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153]
 gi|238832336|gb|EEQ24645.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3]
 gi|239530013|gb|EEQ69014.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153]
 gi|256615472|gb|EEU20662.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN]
 gi|260547826|gb|EEX23803.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN]
 gi|260561360|gb|EEX27333.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US]
 gi|297149643|gb|EFH29940.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16]
          Length = 116

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPREKRIVVALTYIYGIGEPTAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR ++MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREISMNIKRLVDIGSYRGVRHRRGLPVRGQNTKNNARTRK 110


>gi|170769485|ref|ZP_02903938.1| ribosomal protein S13p [Escherichia albertii TW07627]
 gi|331674804|ref|ZP_08375561.1| 30S ribosomal protein S13 [Escherichia coli TA280]
 gi|170121542|gb|EDS90473.1| ribosomal protein S13p [Escherichia albertii TW07627]
 gi|331067713|gb|EGI39111.1| 30S ribosomal protein S13 [Escherichia coli TA280]
          Length = 118

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|282899973|ref|ZP_06307934.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505]
 gi|281195243|gb|EFA70179.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505]
          Length = 145

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 75/101 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAGV++PR KRV   L YI+GIG + SQDI     + P+ RV  L ++++  +R  I
Sbjct: 20  VARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 79

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQ
Sbjct: 80  ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 120


>gi|116266144|gb|ABJ91310.1| 30S ribosomal protein S13 [Porphyra yezoensis]
          Length = 126

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + +   L + +V+ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT  NARTR+  GK  VA 
Sbjct: 61  ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRINARTRRG-GKKTVAG 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|109897336|ref|YP_660591.1| 30S ribosomal protein S13 [Pseudoalteromonas atlantica T6c]
 gi|122972199|sp|Q15X51|RS13_PSEA6 RecName: Full=30S ribosomal protein S13
 gi|109699617|gb|ABG39537.1| SSU ribosomal protein S13P [Pseudoalteromonas atlantica T6c]
 gi|332175077|gb|AEE24331.1| 30S ribosomal protein S13 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 118

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I G+G   +Q IC    +    ++  L E+++ ++R  +
Sbjct: 1   MARIAGINIPEHKHTVIALTAIFGVGSTRAQSICEAAGVAETTKIKDLDEAQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|309789646|ref|ZP_07684227.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6]
 gi|308228382|gb|EFO82029.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6]
          Length = 126

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 78/101 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  ++ YI GIG  +  D+  K  + PE RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKKIEISIRYIFGIGPSNGLDVLRKANVNPETRVRDLTEEEVGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQ
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQ 101


>gi|121592835|ref|YP_984731.1| 30S ribosomal protein S13 [Acidovorax sp. JS42]
 gi|222109615|ref|YP_002551879.1| 30S ribosomal protein s13 [Acidovorax ebreus TPSY]
 gi|319764617|ref|YP_004128554.1| 30S ribosomal protein s13 [Alicycliphilus denitrificans BC]
 gi|330826874|ref|YP_004390177.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601]
 gi|158706210|sp|A1W330|RS13_ACISJ RecName: Full=30S ribosomal protein S13
 gi|254811148|sp|B9MBV9|RS13_DIAST RecName: Full=30S ribosomal protein S13
 gi|120604915|gb|ABM40655.1| SSU ribosomal protein S13P [Acidovorax sp. JS42]
 gi|221729059|gb|ACM31879.1| ribosomal protein S13 [Acidovorax ebreus TPSY]
 gi|317119178|gb|ADV01667.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans BC]
 gi|329312246|gb|AEB86661.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601]
          Length = 121

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   ++ IC    I   ++V +L ++++ +IR  I
Sbjct: 1   MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|82701922|ref|YP_411488.1| 30S ribosomal protein S13 [Nitrosospira multiformis ATCC 25196]
 gi|91207708|sp|Q2YAX5|RS13_NITMU RecName: Full=30S ribosomal protein S13
 gi|82409987|gb|ABB74096.1| SSU ribosomal protein S13P [Nitrosospira multiformis ATCC 25196]
          Length = 125

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I+GIG   +++IC    I    ++  + ++E+ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIYGIGRARAREICEAAGINVSTKMKDVTDAEMDKLRDNV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRK 110


>gi|291613259|ref|YP_003523416.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1]
 gi|291583371|gb|ADE11029.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1]
          Length = 121

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I+GIG   +Q IC    I    +V  + +S++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIYGIGRTRAQQICAAAGIVTSTKVKDISDSDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREISMNIKRLMDLGCYRGLRHRRGLPCRGQRTRTNARTRK 110


>gi|227879266|ref|ZP_03997136.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01]
 gi|256849159|ref|ZP_05554592.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US]
 gi|227861160|gb|EEJ68809.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01]
 gi|256713935|gb|EEU28923.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US]
          Length = 116

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICAYAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|322436521|ref|YP_004218733.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9]
 gi|321164248|gb|ADW69953.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9]
          Length = 126

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V   L YI+GIG   +  I     I P  +V  L E ++  IRQ I
Sbjct: 1   MARIAGVDVPNNKQVRIGLTYIYGIGDSRAAKILTAADIDPIAKVGTLDEDQLNAIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+   +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EKQGMIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|331703692|ref|YP_004400379.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384359|gb|ACU78929.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256385191|gb|ACU79760.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455858|gb|ADH22093.1| 30S ribosomal protein S13 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802247|emb|CBW54401.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 121

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K
Sbjct: 61  SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110


>gi|50086193|ref|YP_047703.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1]
 gi|81392282|sp|Q6F7T4|RS13_ACIAD RecName: Full=30S ribosomal protein S13
 gi|49532169|emb|CAG69881.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1]
          Length = 118

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  +++ I   + I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKSILAAVGIGPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|294630918|ref|ZP_06709478.1| 30S ribosomal protein S13 [Streptomyces sp. e14]
 gi|292834251|gb|EFF92600.1| 30S ribosomal protein S13 [Streptomyces sp. e14]
          Length = 126

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLAATGVDPNTRVRDLTEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|295398312|ref|ZP_06808354.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563]
 gi|294973451|gb|EFG49236.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563]
          Length = 121

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V AL YI+GIG  +SQ I  +  I  + RV  L   E+ ++R A+
Sbjct: 1   MARIAGVDIPREKRIVIALTYIYGIGKTTSQKILAQAEISEDTRVRDLTNDELDRLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR  A++IKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DT-IKVEGDLRRERALDIKRLQEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|145225549|ref|YP_001136227.1| 30S ribosomal protein S13 [Mycobacterium gilvum PYR-GCK]
 gi|315445901|ref|YP_004078780.1| 30S ribosomal protein S13P [Mycobacterium sp. Spyr1]
 gi|189044282|sp|A4TEI2|RS13_MYCGI RecName: Full=30S ribosomal protein S13
 gi|145218035|gb|ABP47439.1| SSU ribosomal protein S13P [Mycobacterium gilvum PYR-GCK]
 gi|315264204|gb|ADU00946.1| SSU ribosomal protein S13P [Mycobacterium sp. Spyr1]
          Length = 124

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   SQ+I     I  ++R   L + +V Q+R  I
Sbjct: 1   MARLMGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGISRDQRTKDLTDDQVSQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|68536851|ref|YP_251556.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411]
 gi|260579209|ref|ZP_05847099.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734]
 gi|91207697|sp|Q4JTB9|RS13_CORJK RecName: Full=30S ribosomal protein S13
 gi|68264450|emb|CAI37938.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411]
 gi|258602695|gb|EEW15982.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734]
          Length = 122

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ENTWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|22127882|ref|NP_671305.1| 30S ribosomal protein S13 [Yersinia pestis KIM 10]
 gi|45440089|ref|NP_991628.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597966|ref|YP_072157.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953]
 gi|108809233|ref|YP_653149.1| 30S ribosomal protein S13 [Yersinia pestis Antiqua]
 gi|108813998|ref|YP_649765.1| 30S ribosomal protein S13 [Yersinia pestis Nepal516]
 gi|145597472|ref|YP_001161547.1| 30S ribosomal protein S13 [Yersinia pestis Pestoides F]
 gi|150260721|ref|ZP_01917449.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125]
 gi|153948869|ref|YP_001402841.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758]
 gi|162419404|ref|YP_001605194.1| 30S ribosomal protein S13 [Yersinia pestis Angola]
 gi|165927875|ref|ZP_02223707.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165940335|ref|ZP_02228856.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010483|ref|ZP_02231381.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213241|ref|ZP_02239276.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398509|ref|ZP_02304033.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418694|ref|ZP_02310447.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425710|ref|ZP_02317463.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170022566|ref|YP_001719071.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis YPIII]
 gi|186897162|ref|YP_001874274.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+]
 gi|218927437|ref|YP_002345312.1| 30S ribosomal protein S13 [Yersinia pestis CO92]
 gi|229836287|ref|ZP_04456454.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A]
 gi|229840089|ref|ZP_04460248.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842171|ref|ZP_04462326.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904529|ref|ZP_04519640.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516]
 gi|270488253|ref|ZP_06205327.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27]
 gi|294502306|ref|YP_003566368.1| 30S ribosomal protein S13 [Yersinia pestis Z176003]
 gi|32363373|sp|Q8ZJ90|RS13_YERPE RecName: Full=30S ribosomal protein S13
 gi|81638250|sp|Q664U3|RS13_YERPS RecName: Full=30S ribosomal protein S13
 gi|123072596|sp|Q1C2W8|RS13_YERPA RecName: Full=30S ribosomal protein S13
 gi|123246110|sp|Q1CCW5|RS13_YERPN RecName: Full=30S ribosomal protein S13
 gi|158706296|sp|A4TH12|RS13_YERPP RecName: Full=30S ribosomal protein S13
 gi|166991605|sp|A7FNL3|RS13_YERP3 RecName: Full=30S ribosomal protein S13
 gi|226712809|sp|B2K515|RS13_YERPB RecName: Full=30S ribosomal protein S13
 gi|226712810|sp|A9R915|RS13_YERPG RecName: Full=30S ribosomal protein S13
 gi|226712811|sp|B1JIY3|RS13_YERPY RecName: Full=30S ribosomal protein S13
 gi|21961018|gb|AAM87556.1|AE014003_14 30S ribosomal subunit protein S13 [Yersinia pestis KIM 10]
 gi|45434944|gb|AAS60505.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591248|emb|CAH22914.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953]
 gi|108777646|gb|ABG20165.1| SSU ribosomal protein S13P [Yersinia pestis Nepal516]
 gi|108781146|gb|ABG15204.1| SSU ribosomal protein S13P [Yersinia pestis Antiqua]
 gi|115346048|emb|CAL18914.1| 30S ribosomal protein S13 [Yersinia pestis CO92]
 gi|145209168|gb|ABP38575.1| SSU ribosomal protein S13P [Yersinia pestis Pestoides F]
 gi|149290129|gb|EDM40206.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125]
 gi|152960364|gb|ABS47825.1| ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758]
 gi|162352219|gb|ABX86167.1| ribosomal protein S13 [Yersinia pestis Angola]
 gi|165911725|gb|EDR30381.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920151|gb|EDR37452.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990573|gb|EDR42874.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205539|gb|EDR50019.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962688|gb|EDR58709.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051013|gb|EDR62421.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055400|gb|EDR65194.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749100|gb|ACA66618.1| ribosomal protein S13 [Yersinia pseudotuberculosis YPIII]
 gi|186700188|gb|ACC90817.1| ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+]
 gi|229678647|gb|EEO74752.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516]
 gi|229690481|gb|EEO82535.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696455|gb|EEO86502.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706355|gb|EEO92362.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A]
 gi|262360386|gb|ACY57107.1| 30S ribosomal protein S13 [Yersinia pestis D106004]
 gi|262364337|gb|ACY60894.1| 30S ribosomal protein S13 [Yersinia pestis D182038]
 gi|270336757|gb|EFA47534.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27]
 gi|294352765|gb|ADE63106.1| 30S ribosomal protein S13 [Yersinia pestis Z176003]
 gi|320013364|gb|ADV96935.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 118

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAEHVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|108798082|ref|YP_638279.1| 30S ribosomal protein S13 [Mycobacterium sp. MCS]
 gi|119867178|ref|YP_937130.1| 30S ribosomal protein S13 [Mycobacterium sp. KMS]
 gi|126433742|ref|YP_001069433.1| 30S ribosomal protein S13 [Mycobacterium sp. JLS]
 gi|123179360|sp|Q1BD11|RS13_MYCSS RecName: Full=30S ribosomal protein S13
 gi|158706250|sp|A3PVL5|RS13_MYCSJ RecName: Full=30S ribosomal protein S13
 gi|158706251|sp|A1UBY2|RS13_MYCSK RecName: Full=30S ribosomal protein S13
 gi|108768501|gb|ABG07223.1| SSU ribosomal protein S13P [Mycobacterium sp. MCS]
 gi|119693267|gb|ABL90340.1| SSU ribosomal protein S13P [Mycobacterium sp. KMS]
 gi|126233542|gb|ABN96942.1| SSU ribosomal protein S13P [Mycobacterium sp. JLS]
          Length = 124

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   SQ+I     I  + R   L + +V Q+R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGIDRDLRTKDLTDDQVTQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|149376662|ref|ZP_01894421.1| 30S ribosomal protein S13 [Marinobacter algicola DG893]
 gi|149359035|gb|EDM47500.1| 30S ribosomal protein S13 [Marinobacter algicola DG893]
          Length = 118

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYIFGVGKTAAQKLCDATGVKPDVKVKDLSDEQLESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK
Sbjct: 61  GK-LAVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRK 110


>gi|116671488|ref|YP_832421.1| 30S ribosomal protein S13 [Arthrobacter sp. FB24]
 gi|158706333|sp|A0JZ51|RS13_ARTS2 RecName: Full=30S ribosomal protein S13
 gi|116611597|gb|ABK04321.1| SSU ribosomal protein S13P [Arthrobacter sp. FB24]
          Length = 125

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L +++++++R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111


>gi|119538759|gb|ABL83376.1| SSU ribosomal protein S13P [Nocardioides sp. JS614]
          Length = 140

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +Q +     + P+ RVHQL + E++++R  I
Sbjct: 17  MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++++EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK
Sbjct: 77  EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 127


>gi|220913402|ref|YP_002488711.1| 30S ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|325964134|ref|YP_004242040.1| 30S ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
 gi|254811125|sp|B8HCX6|RS13_ARTCA RecName: Full=30S ribosomal protein S13
 gi|219860280|gb|ACL40622.1| ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|323470221|gb|ADX73906.1| SSU ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
          Length = 124

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L +++++++R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRK 111


>gi|239943602|ref|ZP_04695539.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
 gi|239990055|ref|ZP_04710719.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 11379]
 gi|291447069|ref|ZP_06586459.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
 gi|291350016|gb|EFE76920.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
          Length = 126

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAATGVNPNTRVRDLAEEDLVKIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR V  NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|54307563|ref|YP_128583.1| 30S ribosomal protein S13 [Photobacterium profundum SS9]
 gi|81615623|sp|Q6LV94|RS13_PHOPR RecName: Full=30S ribosomal protein S13
 gi|46911983|emb|CAG18781.1| putative ribosomal protein S13 [Photobacterium profundum SS9]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ +  +  I    ++ +L E ++  +R+ +
Sbjct: 1   MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLREGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|189183973|ref|YP_001937758.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda]
 gi|226712771|sp|B3CT27|RS13_ORITI RecName: Full=30S ribosomal protein S13
 gi|189180744|dbj|BAG40524.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda]
          Length = 125

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+ VN+P  KRV+  L YI+GIG  ++Q IC ++ +   ++V  L   E++ +R  I
Sbjct: 1   MARISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR + +NIK+  D+ CY GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRK 111


>gi|53803438|ref|YP_114766.1| 30S ribosomal protein S13 [Methylococcus capsulatus str. Bath]
 gi|81681371|sp|Q605D4|RS13_METCA RecName: Full=30S ribosomal protein S13
 gi|53757199|gb|AAU91490.1| ribosomal protein S13 [Methylococcus capsulatus str. Bath]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V+ +L  I+GIG   +  IC    I  +++V +L + +V ++R  +
Sbjct: 1   MARIAGVNIPDHKHVLISLTAIYGIGRTRAGLICKNAGIETDKKVRELSDEQVERLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR VAMNIKRLMDLG YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVAMNIKRLMDLGSYRGMRHRRGLPVRGQRTRTNARTRK 110


>gi|261823210|ref|YP_003261316.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163]
 gi|261607223|gb|ACX89709.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|15676092|ref|NP_273223.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58]
 gi|59802138|ref|YP_208850.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090]
 gi|121634039|ref|YP_974284.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18]
 gi|161870897|ref|YP_001600072.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442]
 gi|218767145|ref|YP_002341657.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491]
 gi|239997948|ref|ZP_04717872.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|240015074|ref|ZP_04721987.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI18]
 gi|240017523|ref|ZP_04724063.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA6140]
 gi|240081666|ref|ZP_04726209.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|240113944|ref|ZP_04728434.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|240116678|ref|ZP_04730740.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|240118900|ref|ZP_04732962.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|240122146|ref|ZP_04735108.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID24-1]
 gi|240124438|ref|ZP_04737394.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|240124693|ref|ZP_04737579.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|240129114|ref|ZP_04741775.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494699|ref|ZP_05107870.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291]
 gi|254805791|ref|YP_003084012.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14]
 gi|260439563|ref|ZP_05793379.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|268593798|ref|ZP_06127965.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|268597763|ref|ZP_06131930.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|268600008|ref|ZP_06134175.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|268602345|ref|ZP_06136512.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|268604609|ref|ZP_06138776.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|268683066|ref|ZP_06149928.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|268683267|ref|ZP_06150129.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|268687496|ref|ZP_06154358.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|291042799|ref|ZP_06568540.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|293398180|ref|ZP_06642385.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62]
 gi|296313387|ref|ZP_06863328.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768]
 gi|304388965|ref|ZP_07371012.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091]
 gi|54039350|sp|P66386|RS13_NEIMB RecName: Full=30S ribosomal protein S13
 gi|54042122|sp|P66385|RS13_NEIMA RecName: Full=30S ribosomal protein S13
 gi|75355451|sp|Q5F5U9|RS13_NEIG1 RecName: Full=30S ribosomal protein S13
 gi|158706255|sp|A1KRJ6|RS13_NEIMF RecName: Full=30S ribosomal protein S13
 gi|189044283|sp|A9M3U3|RS13_NEIM0 RecName: Full=30S ribosomal protein S13
 gi|7225383|gb|AAF40622.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58]
 gi|59719033|gb|AAW90438.1| putative 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090]
 gi|120865745|emb|CAM09474.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18]
 gi|121051153|emb|CAM07424.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491]
 gi|161596450|gb|ABX74110.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442]
 gi|226513739|gb|EEH63084.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291]
 gi|254669333|emb|CBA08378.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14]
 gi|254670760|emb|CBA07029.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha153]
 gi|254672690|emb|CBA06582.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha275]
 gi|261391701|emb|CAX49150.1| 30S ribosomal protein S13 [Neisseria meningitidis 8013]
 gi|268547187|gb|EEZ42605.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|268551551|gb|EEZ46570.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|268584139|gb|EEZ48815.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|268586476|gb|EEZ51152.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|268588740|gb|EEZ53416.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|268623350|gb|EEZ55750.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|268623551|gb|EEZ55951.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|268627780|gb|EEZ60180.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|291013233|gb|EFE05199.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|291611443|gb|EFF40513.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62]
 gi|296840097|gb|EFH24035.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768]
 gi|304337099|gb|EFM03286.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091]
 gi|308388381|gb|ADO30701.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha710]
 gi|319411351|emb|CBY91762.1| 30S ribosomal protein S13 [Neisseria meningitidis WUE 2594]
 gi|325129084|gb|EGC51933.1| ribosomal protein S13p/S18e [Neisseria meningitidis N1568]
 gi|325131055|gb|EGC53779.1| ribosomal protein S13p/S18e [Neisseria meningitidis OX99.30304]
 gi|325133077|gb|EGC55749.1| ribosomal protein S13p/S18e [Neisseria meningitidis M6190]
 gi|325137223|gb|EGC59818.1| ribosomal protein S13p/S18e [Neisseria meningitidis M0579]
 gi|325139055|gb|EGC61601.1| ribosomal protein S13p/S18e [Neisseria meningitidis ES14902]
 gi|325141178|gb|EGC63678.1| ribosomal protein S13p/S18e [Neisseria meningitidis CU385]
 gi|325143255|gb|EGC65594.1| ribosomal protein S13p/S18e [Neisseria meningitidis 961-5945]
 gi|325145362|gb|EGC67639.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240013]
 gi|325197452|gb|ADY92908.1| ribosomal protein S13p/S18e [Neisseria meningitidis G2136]
 gi|325199378|gb|ADY94833.1| ribosomal protein S13p/S18e [Neisseria meningitidis H44/76]
 gi|325203000|gb|ADY98454.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240149]
 gi|325203285|gb|ADY98738.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240355]
 gi|325205258|gb|ADZ00711.1| ribosomal protein S13p/S18e [Neisseria meningitidis M04-240196]
 gi|325207202|gb|ADZ02654.1| hypothetical protein NMBNZ0533_0169 [Neisseria meningitidis
           NZ-05/33]
          Length = 120

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P+ +   L E+++  +R  +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|89093593|ref|ZP_01166541.1| ribosomal protein S13 [Oceanospirillum sp. MED92]
 gi|89082283|gb|EAR61507.1| ribosomal protein S13 [Oceanospirillum sp. MED92]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+GIG  ++ DI     I P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGIGRTTASDILEACGIAPSTKIADLSDEQLDIVRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGC+RG+RHRR LPVRGQR+ TNARTRK
Sbjct: 61  AK-FTVEGDLRREISMSIKRLMDLGCFRGIRHRRNLPVRGQRSKTNARTRK 110


>gi|315640138|ref|ZP_07895260.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952]
 gi|315484115|gb|EFU74589.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952]
          Length = 121

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  I
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNDQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR + +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREINLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|16801818|ref|NP_472086.1| 30S ribosomal protein S13 [Listeria innocua Clip11262]
 gi|16804646|ref|NP_466131.1| 30S ribosomal protein S13 [Listeria monocytogenes EGD-e]
 gi|46908780|ref|YP_015169.1| 30S ribosomal protein S13 [Listeria monocytogenes str. 4b F2365]
 gi|47093974|ref|ZP_00231708.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858]
 gi|47097179|ref|ZP_00234744.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854]
 gi|217966193|ref|YP_002351871.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23]
 gi|224499281|ref|ZP_03667630.1| 30S ribosomal protein S13 [Listeria monocytogenes Finland 1988]
 gi|224503598|ref|ZP_03671905.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL R2-561]
 gi|226225154|ref|YP_002759261.1| ribosomal protein S13 [Listeria monocytogenes Clip81459]
 gi|254825031|ref|ZP_05230032.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194]
 gi|254829057|ref|ZP_05233744.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165]
 gi|254830961|ref|ZP_05235616.1| 30S ribosomal protein S13 [Listeria monocytogenes 10403S]
 gi|254854187|ref|ZP_05243535.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503]
 gi|254899941|ref|ZP_05259865.1| 30S ribosomal protein S13 [Listeria monocytogenes J0161]
 gi|254912853|ref|ZP_05262865.1| ribosomal protein S13 [Listeria monocytogenes J2818]
 gi|254931122|ref|ZP_05264481.1| ribosomal protein S13 [Listeria monocytogenes HPB2262]
 gi|254937233|ref|ZP_05268930.1| ribosomal protein S13 [Listeria monocytogenes F6900]
 gi|254992728|ref|ZP_05274918.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-064]
 gi|255027533|ref|ZP_05299519.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-003]
 gi|255028409|ref|ZP_05300360.1| 30S ribosomal protein S13 [Listeria monocytogenes LO28]
 gi|255520567|ref|ZP_05387804.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-175]
 gi|284800506|ref|YP_003412371.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578]
 gi|284993692|ref|YP_003415460.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923]
 gi|290891793|ref|ZP_06554790.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071]
 gi|300763641|ref|ZP_07073639.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017]
 gi|315283815|ref|ZP_07871884.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120]
 gi|54039349|sp|P66384|RS13_LISIN RecName: Full=30S ribosomal protein S13
 gi|54042121|sp|P66383|RS13_LISMO RecName: Full=30S ribosomal protein S13
 gi|67461446|sp|Q71WH0|RS13_LISMF RecName: Full=30S ribosomal protein S13
 gi|254811152|sp|B8DB32|RS13_LISMH RecName: Full=30S ribosomal protein S13
 gi|259494684|sp|C1KZF7|RS13_LISMC RecName: Full=30S ribosomal protein S13
 gi|16412096|emb|CAD00686.1| ribosomal protein S13 [Listeria monocytogenes EGD-e]
 gi|16415293|emb|CAC97983.1| ribosomal protein S13 [Listeria innocua Clip11262]
 gi|46882053|gb|AAT05346.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47014438|gb|EAL05406.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854]
 gi|47017635|gb|EAL08434.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858]
 gi|217335463|gb|ACK41257.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23]
 gi|225877616|emb|CAS06330.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258601466|gb|EEW14791.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165]
 gi|258607579|gb|EEW20187.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503]
 gi|258609838|gb|EEW22446.1| ribosomal protein S13 [Listeria monocytogenes F6900]
 gi|284056068|gb|ADB67009.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578]
 gi|284059159|gb|ADB70098.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923]
 gi|290558387|gb|EFD91904.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071]
 gi|293582670|gb|EFF94702.1| ribosomal protein S13 [Listeria monocytogenes HPB2262]
 gi|293590851|gb|EFF99185.1| ribosomal protein S13 [Listeria monocytogenes J2818]
 gi|293594273|gb|EFG02034.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194]
 gi|300515918|gb|EFK42967.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017]
 gi|307572197|emb|CAR85376.1| rpsM [Listeria monocytogenes L99]
 gi|313606575|gb|EFR83376.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-208]
 gi|313612542|gb|EFR86615.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120]
 gi|313616944|gb|EFR89579.1| 30S ribosomal protein S13 [Listeria innocua FSL S4-378]
 gi|313622248|gb|EFR92761.1| 30S ribosomal protein S13 [Listeria innocua FSL J1-023]
 gi|328468092|gb|EGF39098.1| 30S ribosomal protein S13 [Listeria monocytogenes 1816]
 gi|328469780|gb|EGF40697.1| 30S ribosomal protein S13 [Listeria monocytogenes 220]
          Length = 121

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG ++++++  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|283788066|ref|YP_003367931.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168]
 gi|282951520|emb|CBG91219.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|313673443|ref|YP_004051554.1| SSU ribosomal protein s13p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940199|gb|ADR19391.1| SSU ribosomal protein S13P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 122

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  K++   L YI+GIG  ++  I ++L +   +++  L E E+  IR+ I
Sbjct: 1   MARVAGVDIPNNKKLEIGLTYIYGIGRSTANRIIDELNLDRNKKIGDLTEQEISSIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119
           +++ +VEGDLR+ +A+NIKRL+++ CYRG RH+ G+PVRGQ+T +NARTR+   GK G+ 
Sbjct: 61  DENLKVEGDLRKDIALNIKRLIEINCYRGYRHKNGMPVRGQKTRSNARTRRGLAGKRGIK 120

Query: 120 RK 121
           RK
Sbjct: 121 RK 122


>gi|197303836|ref|ZP_03168872.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC
           29176]
 gi|197297129|gb|EDY31693.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC
           29176]
          Length = 127

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 77/109 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L   EV +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSADRILKDAGVNPDTRVRDLTSEEVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 66  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114


>gi|257870541|ref|ZP_05650194.1| ribosomal protein S13 [Enterococcus gallinarum EG2]
 gi|257804705|gb|EEV33527.1| ribosomal protein S13 [Enterococcus gallinarum EG2]
          Length = 121

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114]
 gi|241320007|gb|EER56388.1| 30S ribosomal protein S13 [Neisseria flavescens SK114]
          Length = 120

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPSTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|119478110|ref|ZP_01618189.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143]
 gi|119448816|gb|EAW30059.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+GIG  S++ +C    +  + ++  L E ++  +R  I
Sbjct: 1   MARIAGVNIPDHKHAVISLTYIYGIGRPSAKQLCAATGVAEDIKIGALNEEQLDSLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRL+DLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-MSVEGDLRRQVSMNIKRLLDLGCYRGLRHRRNLPLRGQRTKTNARTRK 110


>gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933]
 gi|15833417|ref|NP_312190.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. Sakai]
 gi|16131177|ref|NP_417757.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24114576|ref|NP_709086.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 301]
 gi|26249884|ref|NP_755924.1| 30S ribosomal protein S13 [Escherichia coli CFT073]
 gi|30065401|ref|NP_839572.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 2457T]
 gi|74313817|ref|YP_312236.1| 30S ribosomal protein S13 [Shigella sonnei Ss046]
 gi|82545661|ref|YP_409608.1| 30S ribosomal protein S13 [Shigella boydii Sb227]
 gi|82778594|ref|YP_404943.1| 30S ribosomal protein S13 [Shigella dysenteriae Sd197]
 gi|89110712|ref|AP_004492.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. W3110]
 gi|91212726|ref|YP_542712.1| 30S ribosomal protein S13 [Escherichia coli UTI89]
 gi|110643537|ref|YP_671267.1| 30S ribosomal protein S13 [Escherichia coli 536]
 gi|110807146|ref|YP_690666.1| 30S ribosomal protein S13 [Shigella flexneri 5 str. 8401]
 gi|117625580|ref|YP_858903.1| 30S ribosomal protein S13 [Escherichia coli APEC O1]
 gi|157156782|ref|YP_001464766.1| 30S ribosomal protein S13 [Escherichia coli E24377A]
 gi|157162772|ref|YP_001460090.1| 30S ribosomal protein S13 [Escherichia coli HS]
 gi|168752252|ref|ZP_02777274.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113]
 gi|168758526|ref|ZP_02783533.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401]
 gi|168764981|ref|ZP_02789988.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501]
 gi|168769160|ref|ZP_02794167.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486]
 gi|168777843|ref|ZP_02802850.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196]
 gi|168783866|ref|ZP_02808873.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076]
 gi|168786188|ref|ZP_02811195.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869]
 gi|168802727|ref|ZP_02827734.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508]
 gi|170018466|ref|YP_001723420.1| 30S ribosomal protein S13 [Escherichia coli ATCC 8739]
 gi|170082818|ref|YP_001732138.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683249|ref|YP_001745560.1| 30S ribosomal protein S13 [Escherichia coli SMS-3-5]
 gi|187730609|ref|YP_001881983.1| 30S ribosomal protein S13 [Shigella boydii CDC 3083-94]
 gi|188496196|ref|ZP_03003466.1| ribosomal protein S13p [Escherichia coli 53638]
 gi|191169310|ref|ZP_03031059.1| ribosomal protein S13p [Escherichia coli B7A]
 gi|191174461|ref|ZP_03035962.1| ribosomal protein S13p [Escherichia coli F11]
 gi|193066496|ref|ZP_03047540.1| ribosomal protein S13p [Escherichia coli E22]
 gi|193071552|ref|ZP_03052461.1| ribosomal protein S13p [Escherichia coli E110019]
 gi|194430277|ref|ZP_03062772.1| ribosomal protein S13p [Escherichia coli B171]
 gi|194435062|ref|ZP_03067300.1| ribosomal protein S13p [Shigella dysenteriae 1012]
 gi|194440008|ref|ZP_03072066.1| ribosomal protein S13p [Escherichia coli 101-1]
 gi|195939846|ref|ZP_03085228.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC4024]
 gi|208809664|ref|ZP_03252001.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206]
 gi|208814033|ref|ZP_03255362.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045]
 gi|208818664|ref|ZP_03258984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042]
 gi|209398653|ref|YP_002272754.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115]
 gi|209920764|ref|YP_002294848.1| 30S ribosomal protein S13 [Escherichia coli SE11]
 gi|215488598|ref|YP_002331029.1| 30S ribosomal protein S13 [Escherichia coli O127:H6 str. E2348/69]
 gi|217325692|ref|ZP_03441776.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588]
 gi|218550574|ref|YP_002384365.1| 30S ribosomal protein S13 [Escherichia fergusonii ATCC 35469]
 gi|218555856|ref|YP_002388769.1| 30S ribosomal protein S13 [Escherichia coli IAI1]
 gi|218560360|ref|YP_002393273.1| 30S ribosomal protein S13 [Escherichia coli S88]
 gi|218691585|ref|YP_002399797.1| 30S ribosomal protein S13 [Escherichia coli ED1a]
 gi|218696991|ref|YP_002404658.1| 30S ribosomal protein S13 [Escherichia coli 55989]
 gi|218702061|ref|YP_002409690.1| 30S ribosomal protein S13 [Escherichia coli IAI39]
 gi|218706906|ref|YP_002414425.1| 30S ribosomal protein S13 [Escherichia coli UMN026]
 gi|237703028|ref|ZP_04533509.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA]
 gi|238902389|ref|YP_002928185.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952]
 gi|253771878|ref|YP_003034709.1| 30S ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254038459|ref|ZP_04872515.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43]
 gi|254163226|ref|YP_003046334.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606]
 gi|254795235|ref|YP_003080072.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. TW14359]
 gi|256020657|ref|ZP_05434522.1| 30S ribosomal protein S13 [Shigella sp. D9]
 gi|256025974|ref|ZP_05439839.1| 30S ribosomal protein S13 [Escherichia sp. 4_1_40B]
 gi|260846096|ref|YP_003223874.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str.
           12009]
 gi|260857419|ref|YP_003231310.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str.
           11368]
 gi|260870041|ref|YP_003236443.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str.
           11128]
 gi|261224603|ref|ZP_05938884.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254503|ref|ZP_05947036.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284656|ref|YP_003501474.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615]
 gi|293406895|ref|ZP_06650819.1| rps13 [Escherichia coli FVEC1412]
 gi|293412717|ref|ZP_06655385.1| 30S ribosomal protein S13 [Escherichia coli B354]
 gi|297516786|ref|ZP_06935172.1| 30S ribosomal protein S13 [Escherichia coli OP50]
 gi|298382636|ref|ZP_06992231.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302]
 gi|306816359|ref|ZP_07450497.1| 30S ribosomal protein S13 [Escherichia coli NC101]
 gi|307139981|ref|ZP_07499337.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|307315123|ref|ZP_07594706.1| 30S ribosomal protein S13 [Escherichia coli W]
 gi|309785620|ref|ZP_07680251.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617]
 gi|312968377|ref|ZP_07782587.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75]
 gi|312972441|ref|ZP_07786615.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70]
 gi|331643994|ref|ZP_08345123.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|331649095|ref|ZP_08350181.1| 30S ribosomal protein S13 [Escherichia coli M605]
 gi|331654891|ref|ZP_08355890.1| 30S ribosomal protein S13 [Escherichia coli M718]
 gi|331659588|ref|ZP_08360526.1| 30S ribosomal protein S13 [Escherichia coli TA206]
 gi|331664911|ref|ZP_08365812.1| 30S ribosomal protein S13 [Escherichia coli TA143]
 gi|331670127|ref|ZP_08370966.1| 30S ribosomal protein S13 [Escherichia coli TA271]
 gi|331679367|ref|ZP_08380037.1| 30S ribosomal protein S13 [Escherichia coli H591]
 gi|331684940|ref|ZP_08385526.1| 30S ribosomal protein S13 [Escherichia coli H299]
 gi|67472364|sp|P0A7S9|RS13_ECOLI RecName: Full=30S ribosomal protein S13
 gi|67472365|sp|P0A7T0|RS13_ECOL6 RecName: Full=30S ribosomal protein S13
 gi|67472366|sp|P0A7T1|RS13_ECO57 RecName: Full=30S ribosomal protein S13
 gi|67472367|sp|P0A7T2|RS13_SHIFL RecName: Full=30S ribosomal protein S13
 gi|91207724|sp|Q31VX8|RS13_SHIBS RecName: Full=30S ribosomal protein S13
 gi|91207725|sp|Q32B53|RS13_SHIDS RecName: Full=30S ribosomal protein S13
 gi|91207726|sp|Q3YWW1|RS13_SHISS RecName: Full=30S ribosomal protein S13
 gi|122422201|sp|Q1R633|RS13_ECOUT RecName: Full=30S ribosomal protein S13
 gi|122957162|sp|Q0T004|RS13_SHIF8 RecName: Full=30S ribosomal protein S13
 gi|123343548|sp|Q0TCG3|RS13_ECOL5 RecName: Full=30S ribosomal protein S13
 gi|158706229|sp|A1AGI9|RS13_ECOK1 RecName: Full=30S ribosomal protein S13
 gi|116666560|pdb|1VS5|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116666612|pdb|1VS7|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|256032356|pdb|3E1A|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Pre-Accommodation State
 gi|256032413|pdb|3E1C|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Post-Accommodation State
 gi|257097334|pdb|3I1M|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097386|pdb|3I1O|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097438|pdb|3I1Q|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097492|pdb|3I1S|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097546|pdb|3I1Z|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097601|pdb|3I21|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|290560319|pdb|3KC4|M Chain M, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
           Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
           In Pdb Entry 3kcr
 gi|305677712|pdb|3IYX|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures
           Fitted Into The Cryo-Em Map Of E.Coli 70s Ribosome
           (Emd-1056)
 gi|305677717|pdb|3IYY|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures
           Fitted Into The Cryo-Em Map Of Efg.Gdpnp-Bound E.Coli
           70s Ribosome(Emd-1363)
 gi|308198699|pdb|3OR9|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The First
           70s Ribosome.
 gi|308198720|pdb|3ORA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|326634291|pdb|3IZV|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A
           Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
           Ef-Tu
 gi|326634316|pdb|3IZW|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding.This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A Cognate
           Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
 gi|12517927|gb|AAG58419.1|AE005556_12 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110312|gb|AAN82498.1|AE016767_258 30S ribosomal protein S13 [Escherichia coli CFT073]
 gi|581217|emb|CAA26392.1| unnamed protein product [Escherichia coli]
 gi|606230|gb|AAA58093.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789693|gb|AAC76323.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363636|dbj|BAB37586.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24053772|gb|AAN44793.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 301]
 gi|30043663|gb|AAP19383.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 2457T]
 gi|73857294|gb|AAZ90001.1| 30S ribosomal subunit protein S13 [Shigella sonnei Ss046]
 gi|81242742|gb|ABB63452.1| 30S ribosomal subunit protein S13 [Shigella dysenteriae Sd197]
 gi|81247072|gb|ABB67780.1| 30S ribosomal subunit protein S13 [Shigella boydii Sb227]
 gi|85676743|dbj|BAE77993.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K12
           substr. W3110]
 gi|91074300|gb|ABE09181.1| 30S ribosomal subunit protein S13 [Escherichia coli UTI89]
 gi|110345129|gb|ABG71366.1| 30S ribosomal protein S13 [Escherichia coli 536]
 gi|110616694|gb|ABF05361.1| 30S ribosomal subunit protein S13 [Shigella flexneri 5 str. 8401]
 gi|115514704|gb|ABJ02779.1| 30S ribosomal subunit protein S13 [Escherichia coli APEC O1]
 gi|157068452|gb|ABV07707.1| ribosomal protein S13p [Escherichia coli HS]
 gi|157078812|gb|ABV18520.1| ribosomal protein S13p [Escherichia coli E24377A]
 gi|169753394|gb|ACA76093.1| ribosomal protein S13 [Escherichia coli ATCC 8739]
 gi|169890653|gb|ACB04360.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520967|gb|ACB19145.1| ribosomal protein S13p [Escherichia coli SMS-3-5]
 gi|187427601|gb|ACD06875.1| ribosomal protein S13p [Shigella boydii CDC 3083-94]
 gi|187767000|gb|EDU30844.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196]
 gi|188013862|gb|EDU51984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113]
 gi|188491395|gb|EDU66498.1| ribosomal protein S13p [Escherichia coli 53638]
 gi|188998874|gb|EDU67860.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076]
 gi|189354683|gb|EDU73102.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401]
 gi|189361860|gb|EDU80279.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486]
 gi|189365118|gb|EDU83534.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501]
 gi|189373930|gb|EDU92346.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869]
 gi|189375354|gb|EDU93770.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508]
 gi|190900665|gb|EDV60465.1| ribosomal protein S13p [Escherichia coli B7A]
 gi|190905269|gb|EDV64907.1| ribosomal protein S13p [Escherichia coli F11]
 gi|192925877|gb|EDV80527.1| ribosomal protein S13p [Escherichia coli E22]
 gi|192955140|gb|EDV85634.1| ribosomal protein S13p [Escherichia coli E110019]
 gi|194411666|gb|EDX27993.1| ribosomal protein S13p [Escherichia coli B171]
 gi|194416669|gb|EDX32800.1| ribosomal protein S13p [Shigella dysenteriae 1012]
 gi|194421060|gb|EDX37089.1| ribosomal protein S13p [Escherichia coli 101-1]
 gi|208729465|gb|EDZ79066.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206]
 gi|208735310|gb|EDZ83997.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045]
 gi|208738787|gb|EDZ86469.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042]
 gi|209160053|gb|ACI37486.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115]
 gi|209757258|gb|ACI76941.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757260|gb|ACI76942.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757262|gb|ACI76943.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757264|gb|ACI76944.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757266|gb|ACI76945.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209914023|dbj|BAG79097.1| 30S ribosomal protein S13 [Escherichia coli SE11]
 gi|215266670|emb|CAS11109.1| 30S ribosomal subunit protein S13 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321913|gb|EEC30337.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588]
 gi|218353723|emb|CAV00002.1| 30S ribosomal subunit protein S13 [Escherichia coli 55989]
 gi|218358115|emb|CAQ90762.1| 30S ribosomal subunit protein S13 [Escherichia fergusonii ATCC
           35469]
 gi|218362624|emb|CAR00250.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI1]
 gi|218367129|emb|CAR04903.1| 30S ribosomal subunit protein S13 [Escherichia coli S88]
 gi|218372047|emb|CAR19907.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI39]
 gi|218429149|emb|CAR10101.2| 30S ribosomal subunit protein S13 [Escherichia coli ED1a]
 gi|218434003|emb|CAR14920.1| 30S ribosomal subunit protein S13 [Escherichia coli UMN026]
 gi|222035007|emb|CAP77750.1| 30S ribosomal protein S13 [Escherichia coli LF82]
 gi|226838965|gb|EEH70988.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43]
 gi|226902292|gb|EEH88551.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA]
 gi|238859787|gb|ACR61785.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952]
 gi|242378825|emb|CAQ33617.1| 30S ribosomal subunit protein S13, subunit of 30S ribosomal subunit
           and ribosome [Escherichia coli BL21(DE3)]
 gi|253322922|gb|ACT27524.1| ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975127|gb|ACT40798.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606]
 gi|253979283|gb|ACT44953.1| 30S ribosomal protein S13 [Escherichia coli BL21(DE3)]
 gi|254594635|gb|ACT73996.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756068|dbj|BAI27570.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str.
           11368]
 gi|257761243|dbj|BAI32740.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str.
           12009]
 gi|257766397|dbj|BAI37892.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str.
           11128]
 gi|260447683|gb|ACX38105.1| short-chain dehydrogenase/reductase SDR [Escherichia coli DH1]
 gi|281180333|dbj|BAI56663.1| 30S ribosomal protein S13 [Escherichia coli SE15]
 gi|281602663|gb|ADA75647.1| 30S ribosomal protein S13 [Shigella flexneri 2002017]
 gi|284923304|emb|CBG36398.1| 30S ribosomal subunit protein S13 [Escherichia coli 042]
 gi|290764529|gb|ADD58490.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615]
 gi|291425706|gb|EFE98740.1| rps13 [Escherichia coli FVEC1412]
 gi|291468364|gb|EFF10857.1| 30S ribosomal protein S13 [Escherichia coli B354]
 gi|294492834|gb|ADE91590.1| ribosomal protein S13p [Escherichia coli IHE3034]
 gi|298276472|gb|EFI17990.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302]
 gi|305850755|gb|EFM51212.1| 30S ribosomal protein S13 [Escherichia coli NC101]
 gi|306905472|gb|EFN36007.1| 30S ribosomal protein S13 [Escherichia coli W]
 gi|307555386|gb|ADN48161.1| 30S ribosomal subunit protein S13 [Escherichia coli ABU 83972]
 gi|307628333|gb|ADN72637.1| 30S ribosomal protein S13 [Escherichia coli UM146]
 gi|308926740|gb|EFP72216.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617]
 gi|309703710|emb|CBJ03051.1| 30S ribosomal subunit protein S13 [Escherichia coli ETEC H10407]
 gi|310334818|gb|EFQ01023.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70]
 gi|312287202|gb|EFR15112.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75]
 gi|312947849|gb|ADR28676.1| 30S ribosomal protein S13 [Escherichia coli O83:H1 str. NRG 857C]
 gi|313647392|gb|EFS11844.1| ribosomal S13/S18 family protein [Shigella flexneri 2a str. 2457T]
 gi|315062590|gb|ADT76917.1| 30S ribosomal subunit protein S13 [Escherichia coli W]
 gi|315137873|dbj|BAJ45032.1| 30S ribosomal protein S13 [Escherichia coli DH1]
 gi|315617100|gb|EFU97710.1| ribosomal S13/S18 family protein [Escherichia coli 3431]
 gi|320173942|gb|EFW49118.1| 30S ribosomal protein S13 [Shigella dysenteriae CDC 74-1112]
 gi|320182704|gb|EFW57590.1| 30S ribosomal protein S13 [Shigella boydii ATCC 9905]
 gi|320187019|gb|EFW61731.1| 30S ribosomal protein S13 [Shigella flexneri CDC 796-83]
 gi|320191668|gb|EFW66318.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC1212]
 gi|320195390|gb|EFW70017.1| 30S ribosomal protein S13 [Escherichia coli WV_060327]
 gi|320199485|gb|EFW74075.1| 30S ribosomal protein S13 [Escherichia coli EC4100B]
 gi|320639603|gb|EFX09197.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. G5101]
 gi|320645101|gb|EFX14117.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. 493-89]
 gi|320650412|gb|EFX18878.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. H 2687]
 gi|320655937|gb|EFX23857.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661389|gb|EFX28804.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666411|gb|EFX33394.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. LSU-61]
 gi|323154136|gb|EFZ40339.1| ribosomal S13/S18 family protein [Escherichia coli EPECa14]
 gi|323162977|gb|EFZ48812.1| ribosomal protein S13/S18 family protein [Escherichia coli E128010]
 gi|323164862|gb|EFZ50653.1| ribosomal S13/S18 family protein [Shigella sonnei 53G]
 gi|323173934|gb|EFZ59562.1| ribosomal protein S13/S18 family protein [Escherichia coli LT-68]
 gi|323179166|gb|EFZ64740.1| ribosomal protein S13/S18 family protein [Escherichia coli 1180]
 gi|323182776|gb|EFZ68177.1| ribosomal protein S13/S18 family protein [Escherichia coli 1357]
 gi|323189097|gb|EFZ74381.1| ribosomal protein S13/S18 family protein [Escherichia coli RN587/1]
 gi|323376823|gb|ADX49091.1| 30S ribosomal protein S13 [Escherichia coli KO11]
 gi|323934503|gb|EGB30911.1| 30S ribosomal protein S13 [Escherichia coli E1520]
 gi|323939280|gb|EGB35492.1| 30S ribosomal protein S13 [Escherichia coli E482]
 gi|323944281|gb|EGB40357.1| 30S ribosomal protein S13 [Escherichia coli H120]
 gi|323950212|gb|EGB46094.1| 30S ribosomal protein S13 [Escherichia coli H252]
 gi|323954579|gb|EGB50362.1| 30S ribosomal protein S13 [Escherichia coli H263]
 gi|323959551|gb|EGB55204.1| 30S ribosomal protein S13 [Escherichia coli H489]
 gi|323966260|gb|EGB61695.1| 30S ribosomal protein S13 [Escherichia coli M863]
 gi|323970102|gb|EGB65376.1| 30S ribosomal protein S13 [Escherichia coli TA007]
 gi|323974749|gb|EGB69862.1| 30S ribosomal protein S13 [Escherichia coli TW10509]
 gi|324111977|gb|EGC05956.1| 30S ribosomal protein S13 [Escherichia fergusonii B253]
 gi|324116312|gb|EGC10232.1| 30S ribosomal protein S13 [Escherichia coli E1167]
 gi|325498867|gb|EGC96726.1| 30S ribosomal protein S13 [Escherichia fergusonii ECD227]
 gi|326342546|gb|EGD66320.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1044]
 gi|326344533|gb|EGD68282.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1125]
 gi|327250946|gb|EGE62639.1| ribosomal protein S13/S18 family protein [Escherichia coli STEC_7v]
 gi|330909342|gb|EGH37856.1| SSU ribosomal protein S13p (S18e) [Escherichia coli AA86]
 gi|331036288|gb|EGI08514.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|331041593|gb|EGI13737.1| 30S ribosomal protein S13 [Escherichia coli M605]
 gi|331046906|gb|EGI18984.1| 30S ribosomal protein S13 [Escherichia coli M718]
 gi|331052803|gb|EGI24836.1| 30S ribosomal protein S13 [Escherichia coli TA206]
 gi|331057421|gb|EGI29407.1| 30S ribosomal protein S13 [Escherichia coli TA143]
 gi|331062189|gb|EGI34109.1| 30S ribosomal protein S13 [Escherichia coli TA271]
 gi|331072539|gb|EGI43864.1| 30S ribosomal protein S13 [Escherichia coli H591]
 gi|331077311|gb|EGI48523.1| 30S ribosomal protein S13 [Escherichia coli H299]
 gi|332085447|gb|EGI90613.1| ribosomal protein S13/S18 family protein [Shigella boydii 5216-82]
 gi|332086267|gb|EGI91423.1| ribosomal protein S13/S18 family protein [Shigella dysenteriae
           155-74]
 gi|332090433|gb|EGI95531.1| ribosomal protein S13/S18 family protein [Shigella boydii 3594-74]
 gi|332104205|gb|EGJ07551.1| ribosomal protein S13p [Shigella sp. D9]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|50122929|ref|YP_052096.1| 30S ribosomal protein S13 [Pectobacterium atrosepticum SCRI1043]
 gi|81643772|sp|Q6CZZ2|RS13_ERWCT RecName: Full=30S ribosomal protein S13
 gi|49613455|emb|CAG76906.1| 30S ribosomal subunit protein S13 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 118

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATEIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|256380570|ref|YP_003104230.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827]
 gi|255924873|gb|ACU40384.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827]
          Length = 126

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++     I P+ RV  L + ++ ++R  I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIFGIGRTRSKELLKATEISPDLRVKDLGDDDLAKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+ +++EGDLRR +  +I+R M++GCY GLRHRR LPVRGQRT TNARTRK
Sbjct: 61  EEHFKLEGDLRREIQADIRRKMEIGCYEGLRHRRNLPVRGQRTKTNARTRK 111


>gi|254281884|ref|ZP_04956852.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B]
 gi|219678087|gb|EED34436.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B]
          Length = 118

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   ++ +C    +    +V  L E ++ Q+R  +
Sbjct: 1   MARIAGVNIPDHKHAVVSLTYIYGVGRTQAKKLCAVTGVDEATKVADLNEGQLDQLRSLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +EGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  SE-MTIEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRK 110


>gi|270291110|ref|ZP_06197333.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4]
 gi|304385390|ref|ZP_07367735.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284]
 gi|270280506|gb|EFA26341.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4]
 gi|304328597|gb|EFL95818.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284]
          Length = 121

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNTTAQKILKDADVSEDVRVRDLTADQEDKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|257866552|ref|ZP_05646205.1| ribosomal protein S13 [Enterococcus casseliflavus EC30]
 gi|257872932|ref|ZP_05652585.1| ribosomal protein S13 [Enterococcus casseliflavus EC10]
 gi|257876156|ref|ZP_05655809.1| ribosomal protein S13 [Enterococcus casseliflavus EC20]
 gi|325567353|ref|ZP_08144020.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755]
 gi|257800510|gb|EEV29538.1| ribosomal protein S13 [Enterococcus casseliflavus EC30]
 gi|257807096|gb|EEV35918.1| ribosomal protein S13 [Enterococcus casseliflavus EC10]
 gi|257810322|gb|EEV39142.1| ribosomal protein S13 [Enterococcus casseliflavus EC20]
 gi|325158786|gb|EGC70932.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755]
          Length = 121

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILADAGVSEEVRVRDLTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116873974|ref|YP_850755.1| 30S ribosomal protein S13 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123464194|sp|A0ALU4|RS13_LISW6 RecName: Full=30S ribosomal protein S13
 gi|116742852|emb|CAK21976.1| ribosomal protein S13 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 121

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++ ++  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASEVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|282882509|ref|ZP_06291130.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B]
 gi|300814677|ref|ZP_07094928.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281297651|gb|EFA90126.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B]
 gi|300511296|gb|EFK38545.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 120

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   SQ I     +  + RV  L E+E+ +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRSRSQKILKDADVNFDTRVKDLTEAELGRIRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK
Sbjct: 61  -QKYHVEGDLRRDVAMNIKRLREINCYRGRRHKAGLPVRGQKTKTNARTRK 110


>gi|156743924|ref|YP_001434053.1| 30S ribosomal protein S13 [Roseiflexus castenholzii DSM 13941]
 gi|189044291|sp|A7NR39|RS13_ROSCS RecName: Full=30S ribosomal protein S13
 gi|156235252|gb|ABU60035.1| ribosomal protein S13 [Roseiflexus castenholzii DSM 13941]
          Length = 127

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 75/100 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K +  A+ YI GIG  +  D+  K  + P  RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRNKTIEIAITYIFGIGRSNGADVLRKANVNPATRVRDLTEEEVSRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+GLPVRG
Sbjct: 61  EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGLPVRG 100


>gi|16766707|ref|NP_462322.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56415337|ref|YP_152412.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|157148873|ref|YP_001456192.1| 30S ribosomal protein S13 [Citrobacter koseri ATCC BAA-895]
 gi|168264700|ref|ZP_02686673.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168468024|ref|ZP_02701861.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194445617|ref|YP_002042669.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194449228|ref|YP_002047442.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471891|ref|ZP_03077875.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194738391|ref|YP_002116361.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251517|ref|YP_002148338.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197265972|ref|ZP_03166046.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364267|ref|YP_002143904.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198245668|ref|YP_002217381.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200386749|ref|ZP_03213361.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205354954|ref|YP_002228755.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858660|ref|YP_002245311.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238913867|ref|ZP_04657704.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|25009167|sp|Q8ZLM1|RS13_SALTY RecName: Full=30S ribosomal protein S13
 gi|81361068|sp|Q5PK07|RS13_SALPA RecName: Full=30S ribosomal protein S13
 gi|16421974|gb|AAL22281.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129594|gb|AAV79100.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|157086078|gb|ABV15756.1| hypothetical protein CKO_04711 [Citrobacter koseri ATCC BAA-895]
 gi|194404280|gb|ACF64502.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194407532|gb|ACF67751.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194458255|gb|EDX47094.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194713893|gb|ACF93114.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195628910|gb|EDX48320.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095744|emb|CAR61314.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197215220|gb|ACH52617.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197244227|gb|EDY26847.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197940184|gb|ACH77517.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199603847|gb|EDZ02392.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274735|emb|CAR39791.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205346873|gb|EDZ33504.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206710463|emb|CAR34821.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248575|emb|CBG26413.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995627|gb|ACY90512.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159961|emb|CBW19480.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914441|dbj|BAJ38415.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087863|emb|CBY97626.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322615041|gb|EFY11965.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617328|gb|EFY14229.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625550|gb|EFY22375.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626392|gb|EFY23201.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632096|gb|EFY28849.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635025|gb|EFY31748.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643274|gb|EFY39841.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646642|gb|EFY43149.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649988|gb|EFY46407.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652705|gb|EFY49045.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659538|gb|EFY55782.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665520|gb|EFY61707.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670414|gb|EFY66553.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670487|gb|EFY66621.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675063|gb|EFY71146.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681600|gb|EFY77629.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685944|gb|EFY81933.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716409|gb|EFZ07980.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323131776|gb|ADX19206.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195814|gb|EFZ80987.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196430|gb|EFZ81581.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202331|gb|EFZ87376.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207320|gb|EFZ92270.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211244|gb|EFZ96089.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216047|gb|EGA00778.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223462|gb|EGA07790.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226808|gb|EGA10998.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231830|gb|EGA15940.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233217|gb|EGA17312.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237284|gb|EGA21349.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245519|gb|EGA29518.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249025|gb|EGA32947.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250648|gb|EGA34529.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256877|gb|EGA40591.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263026|gb|EGA46573.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266026|gb|EGA49521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272783|gb|EGA56186.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326630103|gb|EGE36446.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 118

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|332040530|gb|EGI76906.1| 30S ribosomal protein S13 [Hylemonella gracilis ATCC 19624]
          Length = 121

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    IP  ++V  L +++  +IR  I
Sbjct: 1   MARIAGINIPPHQHTEIGLTAIFGIGRTRARKICVACGIPFSKKVKDLTDADQEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG+RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGMRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|212704606|ref|ZP_03312734.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098]
 gi|212672005|gb|EEB32488.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098]
          Length = 108

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 78/105 (74%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +EQ+Y+VEGDLRR ++ N
Sbjct: 4   ALTYIYGIGRATALQILSTTGVNWERNIDDLSADEVNEIRKELEQNYKVEGDLRREISTN 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           IKRLMD+GC+RGLRHRRGLPV GQRTHTNARTRK   +G V +K+
Sbjct: 64  IKRLMDIGCFRGLRHRRGLPVHGQRTHTNARTRKGPRRGVVGKKK 108


>gi|268316432|ref|YP_003290151.1| 30S ribosomal protein S13 [Rhodothermus marinus DSM 4252]
 gi|262333966|gb|ACY47763.1| ribosomal protein S13 [Rhodothermus marinus DSM 4252]
          Length = 126

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+IP  KR   AL  I+GIG   +++I +++ + P  R     E +  +IR+ I
Sbjct: 1   MPRIAGVDIPLHKRGEIALTAIYGIGKSRAKEILSRVGLDPNTRPKDWTEEQTREIRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EQ+Y VEG LR  + MNIKRLMD+GCYRG+RHR GLPVRGQRT TNARTRK
Sbjct: 61  EQEYVVEGQLRAEIQMNIKRLMDIGCYRGIRHRLGLPVRGQRTRTNARTRK 111


>gi|269796229|ref|YP_003315684.1| 30S ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
 gi|269098414|gb|ACZ22850.1| SSU ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
          Length = 124

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +Q       I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIFGVGRTRAQQTLAATGISPDVRVKDLGDAELVSLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|193214823|ref|YP_001996022.1| 30S ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
 gi|226712715|sp|B3QYE7|RS13_CHLT3 RecName: Full=30S ribosomal protein S13
 gi|193088300|gb|ACF13575.1| ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
          Length = 125

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGV++PR K VV  L Y++GIG  +++ I  K  +P +++V ++ + E  +IR  +  
Sbjct: 2   RIAGVDLPRNKHVVIGLTYVYGIGRTTAKKILAKAGVPEDKKVSEVTDDEANEIRTIVTN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEG  R    + IKRLMD+GCYRGLRHRRGLP RGQRT TNARTRK
Sbjct: 62  EYKVEGQARSEQQLAIKRLMDIGCYRGLRHRRGLPARGQRTRTNARTRK 110


>gi|165977218|ref|YP_001652811.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|167855328|ref|ZP_02478096.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755]
 gi|190151136|ref|YP_001969661.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|219871574|ref|YP_002475949.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165]
 gi|223042025|ref|ZP_03612206.1| 30S ribosomal protein S13 [Actinobacillus minor 202]
 gi|240948153|ref|ZP_04752556.1| 30S ribosomal protein S13 [Actinobacillus minor NM305]
 gi|254362775|ref|ZP_04978857.1| ribosomal protein S13 [Mannheimia haemolytica PHL213]
 gi|261492714|ref|ZP_05989262.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495671|ref|ZP_05992117.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|303250034|ref|ZP_07336236.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303253208|ref|ZP_07339357.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307246711|ref|ZP_07528781.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307248852|ref|ZP_07530865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307251080|ref|ZP_07533004.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307253466|ref|ZP_07535337.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307255696|ref|ZP_07537500.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307257880|ref|ZP_07539636.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260148|ref|ZP_07541858.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262276|ref|ZP_07543925.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307264485|ref|ZP_07546070.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|153094404|gb|EDN75253.1| ribosomal protein S13 [Mannheimia haemolytica PHL213]
 gi|165877319|gb|ABY70367.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|167853586|gb|EDS24832.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755]
 gi|189916267|gb|ACE62519.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|219691778|gb|ACL33001.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165]
 gi|223017187|gb|EEF15618.1| 30S ribosomal protein S13 [Actinobacillus minor 202]
 gi|240297506|gb|EER48013.1| 30S ribosomal protein S13 [Actinobacillus minor NM305]
 gi|261308778|gb|EEY10035.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311567|gb|EEY12722.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|302647890|gb|EFL78097.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302651097|gb|EFL81251.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306852411|gb|EFM84646.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306854779|gb|EFM86969.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306856910|gb|EFM89042.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306859145|gb|EFM91187.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306861373|gb|EFM93363.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306863610|gb|EFM95537.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865794|gb|EFM97672.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868039|gb|EFM99866.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870182|gb|EFN01941.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 118

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|312199995|ref|YP_004020056.1| 30S ribosomal protein S13 [Frankia sp. EuI1c]
 gi|311231331|gb|ADP84186.1| 30S ribosomal protein S13 [Frankia sp. EuI1c]
          Length = 126

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV   L YI GIG   +++      + P+ RV  L E EVI++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIGLTYIFGIGRTRAKETLVATGVNPDTRVRDLSEDEVIRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDL+R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK
Sbjct: 61  DGHYRVEGDLQREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRK 111


>gi|313889578|ref|ZP_07823223.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122087|gb|EFR45181.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026]
          Length = 121

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +SQ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|255067436|ref|ZP_05319291.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256]
 gi|261380581|ref|ZP_05985154.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703]
 gi|319639571|ref|ZP_07994318.1| 30S ribosomal protein S13 [Neisseria mucosa C102]
 gi|255048231|gb|EET43695.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256]
 gi|284796549|gb|EFC51896.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703]
 gi|317399142|gb|EFV79816.1| 30S ribosomal protein S13 [Neisseria mucosa C102]
          Length = 120

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|311277747|ref|YP_003939978.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1]
 gi|308746942|gb|ADO46694.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1]
          Length = 118

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|90414978|ref|ZP_01222940.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK]
 gi|90323917|gb|EAS40517.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK]
          Length = 118

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ +  +  I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|320533219|ref|ZP_08033933.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|326773988|ref|ZP_08233270.1| 30S ribosomal protein S13 [Actinomyces viscosus C505]
 gi|320134569|gb|EFW26803.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|326636127|gb|EGE37031.1| 30S ribosomal protein S13 [Actinomyces viscosus C505]
          Length = 136

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I
Sbjct: 13  VARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 72

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK
Sbjct: 73  DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 123


>gi|167748454|ref|ZP_02420581.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662]
 gi|317472013|ref|ZP_07931345.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA]
 gi|167652446|gb|EDR96575.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662]
 gi|316900417|gb|EFV22399.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA]
          Length = 122

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 79/109 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS+ I ++  + P+ RV  L + EV +I + I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILSEANVNPDTRVRDLTDDEVRRISEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            +   VEGDLRR +A+NIKRL ++G YRG RHR+GLP RGQ+T TNART
Sbjct: 61  SESQTVEGDLRREIALNIKRLKEIGSYRGKRHRQGLPCRGQKTKTNART 109


>gi|254302863|ref|ZP_04970221.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323055|gb|EDK88305.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 118

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|42561248|ref|NP_975699.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400483|sp|Q6MSP7|RS13_MYCMS RecName: Full=30S ribosomal protein S13
 gi|42492746|emb|CAE77341.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301321045|gb|ADK69688.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 121

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+ EG LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K
Sbjct: 61  SK-YKTEGKLRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110


>gi|145588264|ref|YP_001154861.1| 30S ribosomal protein S13 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189044286|sp|A4SUY3|RS13_POLSQ RecName: Full=30S ribosomal protein S13
 gi|145046670|gb|ABP33297.1| SSU ribosomal protein S13P [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 121

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I GIG   +  IC    +  +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIFGIGTTRANKICQTTGVAIDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V M+IKRLMDLGCYRG+RHR+GLPVRGQRT TNARTRK   K GV  
Sbjct: 61  GK-FITEGDLRREVTMSIKRLMDLGCYRGVRHRKGLPVRGQRTKTNARTRKGPRKSGVQL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|149371652|ref|ZP_01891068.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49]
 gi|149355279|gb|EDM43839.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49]
          Length = 124

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   S+ I  K  +  +++V++  + E+  IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGNSRSKAILEKAGVSEDKKVNEWNDEEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  -GSFTIEGELRSEVQLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110


>gi|148284193|ref|YP_001248283.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong]
 gi|158706339|sp|A5CCJ1|RS13_ORITB RecName: Full=30S ribosomal protein S13
 gi|146739632|emb|CAM79421.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong]
          Length = 125

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+RI+ VN+P  KRV+  L YI+GIG  ++Q IC ++ +   ++V  L   E++ +R  I
Sbjct: 1   MSRISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  Y+VEGDLRR + +NIK+  D+ CY GLRH R LPVRGQ TH+NARTRK
Sbjct: 61  ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRK 111


>gi|16762865|ref|NP_458482.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144352|ref|NP_807694.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052886|ref|ZP_03345764.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425773|ref|ZP_03358523.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213580695|ref|ZP_03362521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213856917|ref|ZP_03384157.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824203|ref|ZP_06543798.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25009165|sp|Q8Z1X6|RS13_SALTI RecName: Full=30S ribosomal protein S13
 gi|25294720|pir||AG1008 30S ribosomal chain protein S13 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16505172|emb|CAD09168.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139990|gb|AAO71554.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 118

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|311896538|dbj|BAJ28946.1| putative ribosomal protein S13 [Kitasatospora setae KM-6054]
          Length = 126

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KR+  AL Y++GIG   +Q    +  +  + RV  + E +++++++ +
Sbjct: 1   MARLSGVDLPREKRIEIALTYVYGIGKTRAQLALAETGVSGDIRVRDISEDDLVKLQKFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +++VEGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRTHTNARTRK
Sbjct: 61  DANFEVEGDLRRQVAADIRRKVEIGCYEGLRHRRGLPVRGQRTHTNARTRK 111


>gi|148655313|ref|YP_001275518.1| 30S ribosomal protein S13 [Roseiflexus sp. RS-1]
 gi|166231922|sp|A5USG5|RS13_ROSS1 RecName: Full=30S ribosomal protein S13
 gi|148567423|gb|ABQ89568.1| SSU ribosomal protein S13P [Roseiflexus sp. RS-1]
          Length = 127

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 76/100 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  A+ YI GIG  +  ++  K  + P  RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIAITYIFGIGRSNGAEVLRKANVNPATRVRDLTEEEVSRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+G+PVRG
Sbjct: 61  EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGMPVRG 100


>gi|83319525|ref|YP_424636.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|313665553|ref|YP_004047424.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50]
 gi|91207706|sp|Q2SRH7|RS13_MYCCT RecName: Full=30S ribosomal protein S13
 gi|83283411|gb|ABC01343.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|312950018|gb|ADR24614.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50]
          Length = 121

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISIEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K
Sbjct: 61  SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVK 110


>gi|34499618|ref|NP_903833.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472]
 gi|81654192|sp|Q7NQH4|RS13_CHRVO RecName: Full=30S ribosomal protein S13
 gi|34105469|gb|AAQ61824.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472]
          Length = 120

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP     V  L  I G+G   +Q IC   ++ P  +V  L E+E+  +R  +
Sbjct: 1   MARIAGVNIPNHAHAVIGLQAIFGVGQTRAQQICAAASVNPSTKVKDLTEAEMEALRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|298370569|ref|ZP_06981884.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281179|gb|EFI22669.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 120

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVNIP    VV  L  I+GIG   ++ IC    I P  +V  L E+++  +R+ +
Sbjct: 1   MARISGVNIPNNAHVVIGLQAIYGIGTTRAKLICEAAKIAPSIKVKDLDENQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|294497009|ref|YP_003560709.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551]
 gi|295702374|ref|YP_003595449.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319]
 gi|294346946|gb|ADE67275.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551]
 gi|294800033|gb|ADF37099.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319]
          Length = 121

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  +++ +  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRPTAEKVLAEAGVSEDTRVRDLTEEELGKIRDIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ +  NARTRK
Sbjct: 61  DS-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRSLPVRGQNSKNNARTRK 110


>gi|227497206|ref|ZP_03927454.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
 gi|226833337|gb|EEH65720.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
          Length = 124

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++ +R  I
Sbjct: 1   MARISGVDLPREKRVEVALTYIFGIGRTRAHETLAATGVNPDTRVKDLSEDELVLLRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK
Sbjct: 61  DANYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 111


>gi|193211875|ref|YP_001997828.1| 30S ribosomal protein S13 [Chlorobaculum parvum NCIB 8327]
 gi|226712712|sp|B3QR95|RS13_CHLP8 RecName: Full=30S ribosomal protein S13
 gi|193085352|gb|ACF10628.1| ribosomal protein S13 [Chlorobaculum parvum NCIB 8327]
          Length = 125

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL Y++GIG  S+++I  K  + P++++ +L + E   IR+ I  
Sbjct: 2   RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y VEG+ R    ++IKRLMD+GCYRGLRHRR LP RGQRT TNARTRK
Sbjct: 62  EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPARGQRTRTNARTRK 110


>gi|224585213|ref|YP_002639012.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469741|gb|ACN47571.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 118

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKIRELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 110


>gi|331088681|ref|ZP_08337591.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330407204|gb|EGG86707.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 122

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 76/109 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L   EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 61  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 109


>gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31]
 gi|262066973|ref|ZP_06026585.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
 gi|294782960|ref|ZP_06748286.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
 gi|229421965|gb|EEO37012.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31]
 gi|291379321|gb|EFE86839.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
 gi|294481601|gb|EFG29376.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
          Length = 118

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|225076417|ref|ZP_03719616.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens
           NRL30031/H210]
 gi|224952265|gb|EEG33474.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens
           NRL30031/H210]
          Length = 120

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E ++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEDQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|320094555|ref|ZP_08026321.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978470|gb|EFW10047.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 124

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E E++++R  I
Sbjct: 1   MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR V  +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|22297647|ref|NP_680894.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1]
 gi|32363319|sp|Q8DML1|RS13_THEEB RecName: Full=30S ribosomal protein S13
 gi|22293824|dbj|BAC07656.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1]
          Length = 126

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  + P+ R   L ++++  +R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTRSKEILAKTGVNPDTRTRDLTDADIAALRAAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           ++ YQVEGDLRR  AMNIKRLMD+GCYRG RHR GLPVRGQ
Sbjct: 61  DE-YQVEGDLRRLEAMNIKRLMDIGCYRGRRHRLGLPVRGQ 100


>gi|154507839|ref|ZP_02043481.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC
           17982]
 gi|293190234|ref|ZP_06608730.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315605924|ref|ZP_07880955.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|153797473|gb|EDN79893.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821050|gb|EFF80003.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315312206|gb|EFU60292.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 132

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E E++++R  I
Sbjct: 9   MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 68

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR V  +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 69  EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRK 119


>gi|326332224|ref|ZP_08198504.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1]
 gi|325949930|gb|EGD41990.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1]
          Length = 125

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+GIG  +SQ +     + P  RVH L E E++++R  I
Sbjct: 1   MARLQGVDLPRDKRVEIALTYIYGIGRTTSQKLLEATGVNPNTRVHALAEDELVKLRDEI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E Q  Q EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EAQGIQTEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRK 112


>gi|229815746|ref|ZP_04446071.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM
           13280]
 gi|229808662|gb|EEP44439.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM
           13280]
          Length = 124

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR    L YI+GIG  ++  +C  L I    R+  L E ++  IR  I
Sbjct: 1   MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q+   VEGDLRR  + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DQNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 112


>gi|295093658|emb|CBK82749.1| 30S ribosomal protein S13 [Coprococcus sp. ART55/1]
          Length = 122

 Score =  123 bits (309), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SSQ I  +  + P+ R   L + EV ++ + I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR +  NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK
Sbjct: 61  KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 111


>gi|254429054|ref|ZP_05042761.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881]
 gi|196195223|gb|EDX90182.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881]
          Length = 118

 Score =  123 bits (309), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   +  IC    I    +V +L   ++  IR  +
Sbjct: 1   MARIAGVNIPENKHTVISLTYIFGIGRTRAASICVATGIEQTAKVRELTGEQLDAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRK 110


>gi|328675429|gb|AEB28104.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida 3523]
          Length = 118

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E +V  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEDQVESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110


>gi|260549818|ref|ZP_05824034.1| ribosomal protein S13 [Acinetobacter sp. RUH2624]
 gi|293610846|ref|ZP_06693146.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024]
 gi|260407068|gb|EEX00545.1| ribosomal protein S13 [Acinetobacter sp. RUH2624]
 gi|292827190|gb|EFF85555.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024]
          Length = 118

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|153816226|ref|ZP_01968894.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756]
 gi|317501798|ref|ZP_07959984.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145846409|gb|EDK23327.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756]
 gi|316896831|gb|EFV18916.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 127

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 76/109 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L   EV +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 66  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 114


>gi|262280203|ref|ZP_06057987.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202]
 gi|262257981|gb|EEY76715.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202]
          Length = 118

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILTAVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|56707500|ref|YP_169396.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89255692|ref|YP_513053.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110669971|ref|YP_666528.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|115314192|ref|YP_762915.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496874|ref|YP_897924.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida
           U112]
 gi|134302564|ref|YP_001122534.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501640|ref|YP_001427705.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010991|ref|ZP_02275922.1| ribosomal protein S13p/S18e [Francisella tularensis subsp.
           holarctica FSC200]
 gi|187932121|ref|YP_001892106.1| 30S ribosomal protein S13 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194324096|ref|ZP_03057870.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida
           FTE]
 gi|208780322|ref|ZP_03247663.1| ribosomal protein S13p/S18e [Francisella novicida FTG]
 gi|224456563|ref|ZP_03665036.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254367073|ref|ZP_04983108.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           257]
 gi|254368643|ref|ZP_04984658.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254370811|ref|ZP_04986816.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254372231|ref|ZP_04987722.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373713|ref|ZP_04989196.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548]
 gi|254874320|ref|ZP_05247030.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290953191|ref|ZP_06557812.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313559|ref|ZP_06804148.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|81597922|sp|Q5NHU6|RS13_FRATT RecName: Full=30S ribosomal protein S13
 gi|122325770|sp|Q0BNQ6|RS13_FRATO RecName: Full=30S ribosomal protein S13
 gi|122501252|sp|Q2A5E8|RS13_FRATH RecName: Full=30S ribosomal protein S13
 gi|123169579|sp|Q14J98|RS13_FRAT1 RecName: Full=30S ribosomal protein S13
 gi|158706231|sp|A0Q4K5|RS13_FRATN RecName: Full=30S ribosomal protein S13
 gi|158706232|sp|A4IZR2|RS13_FRATW RecName: Full=30S ribosomal protein S13
 gi|166231912|sp|A7N9U6|RS13_FRATF RecName: Full=30S ribosomal protein S13
 gi|226712740|sp|B2SDW3|RS13_FRATM RecName: Full=30S ribosomal protein S13
 gi|56603992|emb|CAG44980.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89143523|emb|CAJ78699.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110320304|emb|CAL08363.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|115129091|gb|ABI82278.1| ribosomal protein S13 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118422780|gb|ABK89170.1| 30S ribosomal protein S13 [Francisella novicida U112]
 gi|134050341|gb|ABO47412.1| ribosomal protein S13 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134252898|gb|EBA51992.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           257]
 gi|151569054|gb|EDN34708.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|151569960|gb|EDN35614.1| 30S ribosomal protein S13 [Francisella novicida GA99-3549]
 gi|151571434|gb|EDN37088.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548]
 gi|156252243|gb|ABU60749.1| ribosomal protein S13p/S18e [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121551|gb|EDO65736.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|187713030|gb|ACD31327.1| 30S ribosomal protein S13 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194321543|gb|EDX19027.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida
           FTE]
 gi|208743690|gb|EDZ89993.1| ribosomal protein S13p/S18e [Francisella novicida FTG]
 gi|254840319|gb|EET18755.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158644|gb|ADA78035.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           NE061598]
 gi|328676343|gb|AEB27213.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida Fx1]
          Length = 118

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E +V  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEEQVESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110


>gi|56477616|ref|YP_159205.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1]
 gi|81357336|sp|Q5P310|RS13_AZOSE RecName: Full=30S ribosomal protein S13
 gi|56313659|emb|CAI08304.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1]
          Length = 120

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   +    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAANVVRSVKMKDLTESDMERLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRK 110


>gi|163816002|ref|ZP_02207372.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759]
 gi|158448812|gb|EDP25807.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759]
          Length = 140

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SSQ I  +  + P+ R   L + EV ++ + I
Sbjct: 19  MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 78

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +    VEGDLRR +  NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK
Sbjct: 79  KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRK 129


>gi|189485109|ref|YP_001956050.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226712801|sp|B1GZA7|RS13_UNCTG RecName: Full=30S ribosomal protein S13
 gi|170287068|dbj|BAG13589.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 130

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AG+++P  KR+  AL YI+GIG   S +I  +L++ P +RV  L E EV +I   I
Sbjct: 1   MARVAGIDLPNNKRLDIALRYIYGIGPAISDEIIKELSLNPAKRVKDLTEEEVGRINNLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEGDLRR V  NIKRL+++  YRGLRHRR LPVRGQRT TNARTR+
Sbjct: 61  TKNLKVEGDLRREVQSNIKRLIEIRSYRGLRHRRNLPVRGQRTKTNARTRR 111


>gi|69247193|ref|ZP_00604255.1| Ribosomal protein S13 [Enterococcus faecium DO]
 gi|227550743|ref|ZP_03980792.1| ribosomal protein S13 [Enterococcus faecium TX1330]
 gi|257878748|ref|ZP_05658401.1| ribosomal protein S13 [Enterococcus faecium 1,230,933]
 gi|257881390|ref|ZP_05661043.1| ribosomal protein S13 [Enterococcus faecium 1,231,502]
 gi|257885657|ref|ZP_05665310.1| ribosomal protein S13 [Enterococcus faecium 1,231,501]
 gi|257887998|ref|ZP_05667651.1| ribosomal protein S13 [Enterococcus faecium 1,141,733]
 gi|257890607|ref|ZP_05670260.1| ribosomal protein S13 [Enterococcus faecium 1,231,410]
 gi|257893198|ref|ZP_05672851.1| ribosomal protein S13 [Enterococcus faecium 1,231,408]
 gi|257896383|ref|ZP_05676036.1| ribosomal protein S13 [Enterococcus faecium Com12]
 gi|257899358|ref|ZP_05679011.1| ribosomal protein S13 [Enterococcus faecium Com15]
 gi|258615187|ref|ZP_05712957.1| 30S ribosomal protein S13 [Enterococcus faecium DO]
 gi|260558311|ref|ZP_05830507.1| ribosomal protein S13 [Enterococcus faecium C68]
 gi|261207016|ref|ZP_05921705.1| ribosomal protein S13 [Enterococcus faecium TC 6]
 gi|289565349|ref|ZP_06445799.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF]
 gi|293379469|ref|ZP_06625613.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1]
 gi|293553902|ref|ZP_06674508.1| 30S ribosomal protein S13 [Enterococcus faecium E1039]
 gi|293562970|ref|ZP_06677437.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162]
 gi|293567908|ref|ZP_06679249.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071]
 gi|293570707|ref|ZP_06681757.1| ribosomal protein S13p/S18e [Enterococcus faecium E980]
 gi|294615370|ref|ZP_06695243.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636]
 gi|294618296|ref|ZP_06697877.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679]
 gi|294621102|ref|ZP_06700293.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317]
 gi|314937632|ref|ZP_07844958.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04]
 gi|314942869|ref|ZP_07849682.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C]
 gi|314947995|ref|ZP_07851399.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082]
 gi|314950912|ref|ZP_07853981.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A]
 gi|314991440|ref|ZP_07856917.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B]
 gi|314995039|ref|ZP_07860159.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01]
 gi|68194958|gb|EAN09426.1| Ribosomal protein S13 [Enterococcus faecium DO]
 gi|227180204|gb|EEI61176.1| ribosomal protein S13 [Enterococcus faecium TX1330]
 gi|257812976|gb|EEV41734.1| ribosomal protein S13 [Enterococcus faecium 1,230,933]
 gi|257817048|gb|EEV44376.1| ribosomal protein S13 [Enterococcus faecium 1,231,502]
 gi|257821513|gb|EEV48643.1| ribosomal protein S13 [Enterococcus faecium 1,231,501]
 gi|257824052|gb|EEV50984.1| ribosomal protein S13 [Enterococcus faecium 1,141,733]
 gi|257826967|gb|EEV53593.1| ribosomal protein S13 [Enterococcus faecium 1,231,410]
 gi|257829577|gb|EEV56184.1| ribosomal protein S13 [Enterococcus faecium 1,231,408]
 gi|257832948|gb|EEV59369.1| ribosomal protein S13 [Enterococcus faecium Com12]
 gi|257837270|gb|EEV62344.1| ribosomal protein S13 [Enterococcus faecium Com15]
 gi|260075485|gb|EEW63791.1| ribosomal protein S13 [Enterococcus faecium C68]
 gi|260078644|gb|EEW66346.1| ribosomal protein S13 [Enterococcus faecium TC 6]
 gi|289162839|gb|EFD10689.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF]
 gi|291589493|gb|EFF21300.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071]
 gi|291591744|gb|EFF23380.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636]
 gi|291595390|gb|EFF26702.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679]
 gi|291599338|gb|EFF30364.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317]
 gi|291601954|gb|EFF32200.1| 30S ribosomal protein S13 [Enterococcus faecium E1039]
 gi|291605096|gb|EFF34563.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162]
 gi|291609179|gb|EFF38451.1| ribosomal protein S13p/S18e [Enterococcus faecium E980]
 gi|292641992|gb|EFF60158.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1]
 gi|313590765|gb|EFR69610.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01]
 gi|313593920|gb|EFR72765.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B]
 gi|313596921|gb|EFR75766.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A]
 gi|313598341|gb|EFR77186.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C]
 gi|313643009|gb|EFS07589.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04]
 gi|313645593|gb|EFS10173.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082]
          Length = 121

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  + RV +L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKILADAGVSEDVRVRELTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|171778399|ref|ZP_02919578.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282930|gb|EDT48354.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 121

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|32034697|ref|ZP_00134835.1| COG0099: Ribosomal protein S13 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209245|ref|YP_001054470.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae L20]
 gi|158706211|sp|A3N379|RS13_ACTP2 RecName: Full=30S ribosomal protein S13
 gi|126098037|gb|ABN74865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 118

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAVTGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|239980031|ref|ZP_04702555.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
 gi|291451888|ref|ZP_06591278.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
 gi|291354837|gb|EFE81739.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
          Length = 126

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLEATGVDPNARVRDLSEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|289435874|ref|YP_003465746.1| hypothetical protein lse_2513 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172118|emb|CBH28664.1| rpsM [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313631792|gb|EFR98972.1| 30S ribosomal protein S13 [Listeria seeligeri FSL N1-067]
 gi|313636144|gb|EFS02007.1| 30S ribosomal protein S13 [Listeria seeligeri FSL S4-171]
          Length = 121

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++  +  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRK 110


>gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978]
 gi|169632372|ref|YP_001706108.1| 30S ribosomal protein S13 [Acinetobacter baumannii SDF]
 gi|169794616|ref|YP_001712409.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE]
 gi|184159576|ref|YP_001847915.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU]
 gi|213158813|ref|YP_002320811.1| ribosomal protein S13 [Acinetobacter baumannii AB0057]
 gi|215482205|ref|YP_002324387.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii
           AB307-0294]
 gi|239503212|ref|ZP_04662522.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB900]
 gi|260557049|ref|ZP_05829266.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606]
 gi|262373499|ref|ZP_06066777.1| 30S ribosomal protein S13 [Acinetobacter junii SH205]
 gi|294839725|ref|ZP_06784408.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013113]
 gi|294842675|ref|ZP_06787358.1| 30S ribosomal protein S13 [Acinetobacter sp. 6014059]
 gi|294860403|ref|ZP_06798172.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013150]
 gi|301345032|ref|ZP_07225773.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB056]
 gi|301512037|ref|ZP_07237274.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB058]
 gi|301595206|ref|ZP_07240214.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB059]
 gi|158706208|sp|A3M962|RS13_ACIBT RecName: Full=30S ribosomal protein S13
 gi|226712678|sp|B7GW24|RS13_ACIB3 RecName: Full=30S ribosomal protein S13
 gi|226712679|sp|B7IA17|RS13_ACIB5 RecName: Full=30S ribosomal protein S13
 gi|226712680|sp|B2HZ86|RS13_ACIBC RecName: Full=30S ribosomal protein S13
 gi|226712681|sp|B0VQU0|RS13_ACIBS RecName: Full=30S ribosomal protein S13
 gi|226712682|sp|B0V6U4|RS13_ACIBY RecName: Full=30S ribosomal protein S13
 gi|126388958|gb|ABO13456.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978]
 gi|169147543|emb|CAM85404.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE]
 gi|169151164|emb|CAO99836.1| 30S ribosomal protein S13 [Acinetobacter baumannii]
 gi|183211170|gb|ACC58568.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU]
 gi|213057973|gb|ACJ42875.1| ribosomal protein S13 [Acinetobacter baumannii AB0057]
 gi|213988532|gb|ACJ58831.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii
           AB307-0294]
 gi|260409655|gb|EEX02956.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606]
 gi|262311252|gb|EEY92338.1| 30S ribosomal protein S13 [Acinetobacter junii SH205]
 gi|322509486|gb|ADX04940.1| 30S ribosomal protein S13 [Acinetobacter baumannii 1656-2]
 gi|323519507|gb|ADX93888.1| 30S ribosomal protein S13 [Acinetobacter baumannii TCDC-AB0715]
 gi|325123582|gb|ADY83105.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus PHEA-2]
          Length = 118

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|167626785|ref|YP_001677285.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667365|ref|ZP_04754943.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875915|ref|ZP_05248625.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189044265|sp|B0U0W8|RS13_FRAP2 RecName: Full=30S ribosomal protein S13
 gi|158523429|gb|ABW70827.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596786|gb|ABZ86784.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841936|gb|EET20350.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 118

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E ++  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQSCKVDPTVKIKDLSEEQIETLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRK 110


>gi|15674311|ref|NP_268484.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS]
 gi|19745265|ref|NP_606401.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232]
 gi|21909600|ref|NP_663868.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315]
 gi|28894978|ref|NP_801328.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1]
 gi|50913463|ref|YP_059435.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10394]
 gi|71902733|ref|YP_279536.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS6180]
 gi|71909882|ref|YP_281432.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS5005]
 gi|94987699|ref|YP_595800.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS9429]
 gi|94989580|ref|YP_597680.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10270]
 gi|94991568|ref|YP_599667.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS2096]
 gi|94993468|ref|YP_601566.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10750]
 gi|139472951|ref|YP_001127666.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo]
 gi|209558651|ref|YP_002285123.1| 30S ribosomal protein S13 [Streptococcus pyogenes NZ131]
 gi|306828237|ref|ZP_07461497.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782]
 gi|54039355|sp|P66395|RS13_STRP3 RecName: Full=30S ribosomal protein S13
 gi|54039356|sp|P66396|RS13_STRP8 RecName: Full=30S ribosomal protein S13
 gi|54042126|sp|P66394|RS13_STRP1 RecName: Full=30S ribosomal protein S13
 gi|73917915|sp|Q5XEB1|RS13_STRP6 RecName: Full=30S ribosomal protein S13
 gi|91207628|sp|Q48VS5|RS13_STRPM RecName: Full=30S ribosomal protein S13
 gi|158706280|sp|Q1JE35|RS13_STRPB RecName: Full=30S ribosomal protein S13
 gi|158706281|sp|Q1JNZ3|RS13_STRPC RecName: Full=30S ribosomal protein S13
 gi|158706282|sp|Q1JJ37|RS13_STRPD RecName: Full=30S ribosomal protein S13
 gi|158706283|sp|Q1J8Y9|RS13_STRPF RecName: Full=30S ribosomal protein S13
 gi|158706284|sp|A2RC38|RS13_STRPG RecName: Full=30S ribosomal protein S13
 gi|226712793|sp|B5XJ60|RS13_STRPZ RecName: Full=30S ribosomal protein S13
 gi|13621392|gb|AAK33206.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS]
 gi|19747360|gb|AAL96900.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232]
 gi|21903781|gb|AAM78671.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315]
 gi|28810223|dbj|BAC63161.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1]
 gi|50902537|gb|AAT86252.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10394]
 gi|71801828|gb|AAX71181.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS6180]
 gi|71852664|gb|AAZ50687.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS5005]
 gi|94541207|gb|ABF31256.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS9429]
 gi|94543088|gb|ABF33136.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10270]
 gi|94545076|gb|ABF35123.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS2096]
 gi|94546976|gb|ABF37022.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10750]
 gi|134271197|emb|CAM29410.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo]
 gi|209539852|gb|ACI60428.1| SSU ribosomal protein S13p (S18e) [Streptococcus pyogenes NZ131]
 gi|304429548|gb|EFM32597.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782]
          Length = 121

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|329945755|ref|ZP_08293442.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528203|gb|EGF55181.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 136

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I
Sbjct: 13  VARISGVDLPREKRVEVALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVRLRTHI 72

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK
Sbjct: 73  DGSYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 123


>gi|124268604|ref|YP_001022608.1| 30S ribosomal protein S13 [Methylibium petroleiphilum PM1]
 gi|158706441|sp|A2SLD4|RS13_METPP RecName: Full=30S ribosomal protein S13
 gi|124261379|gb|ABM96373.1| SSU ribosomal protein S13P [Methylibium petroleiphilum PM1]
          Length = 121

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  ++Q IC+   I  ++++  L + ++ +IR+ +
Sbjct: 1   MARIAGINIPPQKHAEIGLTAIYGIGRTTAQKICDSCGIARDKKIKDLTDGDLEKIREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR   +NIKRLMDLGCYRG RHRRGLP+RGQRT TNARTRK   K   A 
Sbjct: 61  GR-MTIEGDLRRETTINIKRLMDLGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKSAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|326383229|ref|ZP_08204917.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395]
 gi|326197979|gb|EGD55165.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395]
          Length = 122

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G  +S++I     +  + R   L +++V ++R+ I
Sbjct: 1   MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILAATGLSADLRAKDLTDADVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|225387213|ref|ZP_03756977.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme
           DSM 15981]
 gi|225046692|gb|EEG56938.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme
           DSM 15981]
          Length = 122

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSANRILTEAGVNPDTRVKDLTDDEVKKLATII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
                VEGDLRR +A+NIKRL ++GCYRG+RHR+ LPVRGQ+T TNART
Sbjct: 61  ADTQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNART 109


>gi|315304919|ref|ZP_07875023.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596]
 gi|313626710|gb|EFR95739.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596]
          Length = 121

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++  +  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|222152289|ref|YP_002561464.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J]
 gi|254811169|sp|B9DSX4|RS13_STRU0 RecName: Full=30S ribosomal protein S13
 gi|222113100|emb|CAR40482.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J]
          Length = 121

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|31544834|ref|NP_853412.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)]
 gi|26399325|sp|Q9RDV8|RS13_MYCGA RecName: Full=30S ribosomal protein S13
 gi|6601580|gb|AAF19041.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum]
 gi|31541680|gb|AAP56980.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)]
 gi|284930908|gb|ADC30847.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(high)]
 gi|284931664|gb|ADC31602.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. F]
          Length = 124

 Score =  123 bits (308), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KRV  +L YI+GIG   +Q+I  K  I   +RV  L + E+  IR ++
Sbjct: 1   MARILGIDIPNNKRVEISLTYIYGIGKPRAQEILRKAKIDFNKRVKDLSDEELALIR-SV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y +EGDLRR VA+NIKRLM++G Y GLRHRRGLPVRGQRT +NARTRK
Sbjct: 60  ASTYVLEGDLRRDVALNIKRLMEVGSYAGLRHRRGLPVRGQRTKSNARTRK 110


>gi|329116762|ref|ZP_08245479.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020]
 gi|326907167|gb|EGE54081.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020]
          Length = 121

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y+ GIG  +SQ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVFGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|319948698|ref|ZP_08022819.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
 gi|319437600|gb|EFV92599.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
          Length = 122

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S +I  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILERTGISPDLRTKDLTDEQLTVLRDDI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREIQGDIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|154505144|ref|ZP_02041882.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149]
 gi|153794623|gb|EDN77043.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149]
          Length = 159

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 79/109 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + +V +I + I
Sbjct: 38  MARIAGVDLPRDKRVEIGLTYIYGIGKTSAIRILADAGVDPDTRVRDLTQDDVKKISEVI 97

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART
Sbjct: 98  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNART 146


>gi|116493139|ref|YP_804874.1| 30S ribosomal protein S13 [Pediococcus pentosaceus ATCC 25745]
 gi|122265397|sp|Q03EE0|RS13_PEDPA RecName: Full=30S ribosomal protein S13
 gi|116103289|gb|ABJ68432.1| SSU ribosomal protein S13P [Pediococcus pentosaceus ATCC 25745]
          Length = 121

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILKDAEVSEDIRVRDLTADQEDKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  D-NYLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|88854652|ref|ZP_01129318.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1]
 gi|88815813|gb|EAR25669.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1]
          Length = 124

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +        I  E RVH L + ++I +R  I
Sbjct: 1   MARLAGVDIPRDKRVEVALTYIYGVGRTRALKTLADTQISGEIRVHDLTDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++QVEGDLRR VA +I+R +++G Y+G+RHR+GLPV GQRT TNARTRK
Sbjct: 61  EGNFQVEGDLRREVAADIRRKVEIGSYQGIRHRKGLPVHGQRTKTNARTRK 111


>gi|261364877|ref|ZP_05977760.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996]
 gi|288566925|gb|EFC88485.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996]
          Length = 120

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPITKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|90962382|ref|YP_536298.1| 30S ribosomal protein S13 [Lactobacillus salivarius UCC118]
 gi|227891568|ref|ZP_04009373.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741]
 gi|301300217|ref|ZP_07206429.1| 30S ribosomal protein S13 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|122448614|sp|Q1WSB4|RS13_LACS1 RecName: Full=30S ribosomal protein S13
 gi|90821576|gb|ABE00215.1| SSU ribosomal protein S13P [Lactobacillus salivarius UCC118]
 gi|227866715|gb|EEJ74136.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741]
 gi|300852158|gb|EFK79830.1| 30S ribosomal protein S13 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 121

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV  L YI+GIG  ++Q I ++  +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRNKRVVIGLTYIYGIGNSTAQKILSEAGVSEDVRVRDLTADQEDKIRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V++NIKRL ++G YRGLRHRR LPVRGQ T  NARTRK
Sbjct: 61  DK-YKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPVRGQNTKNNARTRK 110


>gi|19704621|ref|NP_604183.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296329032|ref|ZP_06871538.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|32363351|sp|Q8RE41|RS13_FUSNN RecName: Full=30S ribosomal protein S13
 gi|19714921|gb|AAL95482.1| SSU ribosomal protein S13P [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296153836|gb|EFG94648.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 118

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEINKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|299768688|ref|YP_003730714.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1]
 gi|298698776|gb|ADI89341.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1]
          Length = 118

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|226953893|ref|ZP_03824357.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244]
 gi|294651612|ref|ZP_06728916.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194]
 gi|226835376|gb|EEH67759.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244]
 gi|292822461|gb|EFF81360.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194]
          Length = 118

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGIAGTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|161485990|ref|NP_737179.2| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
 gi|32363329|sp|Q8FS35|RS13_COREF RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|312866513|ref|ZP_07726730.1| 30S ribosomal protein S13 [Streptococcus downei F0415]
 gi|311097944|gb|EFQ56171.1| 30S ribosomal protein S13 [Streptococcus downei F0415]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K VV +L YI+GIG  +SQ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKHVVISLTYIYGIGLATSQKILAAAGVAEDIRVKDLTTDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  D-NIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|119502945|ref|ZP_01625030.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080]
 gi|119461291|gb|EAW42381.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080]
          Length = 118

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP  K  + +L YI+G+G   ++ + +   I  + +V +L E E+ Q+R  +
Sbjct: 1   MARLAGVNIPDNKHALVSLTYIYGVGRTQARRLLDATGISYQTKVGELSEGELDQLR-GL 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +  VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK
Sbjct: 60  LNELTVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRK 110


>gi|320548031|ref|ZP_08042311.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812]
 gi|320447273|gb|EFW88036.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|227876169|ref|ZP_03994285.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243]
 gi|269976924|ref|ZP_06183898.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1]
 gi|306819444|ref|ZP_07453151.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239]
 gi|307701694|ref|ZP_07638710.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16]
 gi|227843130|gb|EEJ53323.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243]
 gi|269934755|gb|EEZ91315.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1]
 gi|304647736|gb|EFM45054.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239]
 gi|307613197|gb|EFN92450.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16]
          Length = 124

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +++      + P+ RV  L E E+I++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIYGIGRTRAKETLESTGVSPDTRVKDLTEDELIKLRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNARTRK
Sbjct: 61  QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARTRK 111


>gi|226939209|ref|YP_002794280.1| RpsM [Laribacter hongkongensis HLHK9]
 gi|254811151|sp|C1DAU0|RS13_LARHH RecName: Full=30S ribosomal protein S13
 gi|226714133|gb|ACO73271.1| RpsM [Laribacter hongkongensis HLHK9]
          Length = 120

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +   L  I+GIG   ++ IC+   I    +V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNIPNHQHIWVGLQAIYGIGATRAKVICSAAGIEISTKVKDLTDAEMEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EGDLRR V MNIKRLMDLGCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-FTIEGDLRREVTMNIKRLMDLGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|328958705|ref|YP_004376091.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4]
 gi|328675029|gb|AEB31075.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  ++Q +     +  E RV  L   ++  IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    R
Sbjct: 61  DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSIAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|293375414|ref|ZP_06621695.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909]
 gi|325844404|ref|ZP_08168131.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1]
 gi|292645967|gb|EFF63996.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909]
 gi|325489078|gb|EGC91462.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  ++Q I     +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGIGKPTAQQILAAAGVSEDTRVRDLTEDELNRIRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR +++NIKRLM++  +RG+RHRR LPVRGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREISLNIKRLMEIASFRGVRHRRSLPVRGQNTKNNARTRK 110


>gi|288925691|ref|ZP_06419623.1| 30S ribosomal protein S13 [Prevotella buccae D17]
 gi|315606480|ref|ZP_07881495.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574]
 gi|288337629|gb|EFC75983.1| 30S ribosomal protein S13 [Prevotella buccae D17]
 gi|315251886|gb|EFU31860.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574]
          Length = 126

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|282858351|ref|ZP_06267531.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010]
 gi|282588799|gb|EFB93924.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010]
          Length = 126

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|261338255|ref|ZP_05966139.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
 gi|270276909|gb|EFA22763.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
          Length = 125

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNDKRIEIALTYIFGVGRTRAKETLAATGINPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  ESNYKIEGDLRREIDADIRRKIQINCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|218245118|ref|YP_002370489.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8801]
 gi|257058143|ref|YP_003136031.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8802]
 gi|226712727|sp|B7K226|RS13_CYAP8 RecName: Full=30S ribosomal protein S13
 gi|218165596|gb|ACK64333.1| ribosomal protein S13 [Cyanothece sp. PCC 8801]
 gi|256588309|gb|ACU99195.1| ribosomal protein S13 [Cyanothece sp. PCC 8802]
          Length = 127

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 72/101 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y+ GIG   SQ+I  +  + P+ RV  L + EV  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYLFGIGLSRSQEILAETGVNPDTRVRDLTDEEVANLRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 [Enterococcus faecalis V583]
 gi|227520016|ref|ZP_03950065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104]
 gi|227555877|ref|ZP_03985924.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22]
 gi|229546940|ref|ZP_04435665.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322]
 gi|229550529|ref|ZP_04439254.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200]
 gi|255971733|ref|ZP_05422319.1| ribosomal protein S13 [Enterococcus faecalis T1]
 gi|255974733|ref|ZP_05425319.1| ribosomal protein S13 [Enterococcus faecalis T2]
 gi|256618356|ref|ZP_05475202.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200]
 gi|256762028|ref|ZP_05502608.1| ribosomal protein S13 [Enterococcus faecalis T3]
 gi|256855187|ref|ZP_05560548.1| ribosomal protein S13 [Enterococcus faecalis T8]
 gi|256956838|ref|ZP_05561009.1| ribosomal protein S13 [Enterococcus faecalis DS5]
 gi|256960645|ref|ZP_05564816.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96]
 gi|256964156|ref|ZP_05568327.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704]
 gi|257078508|ref|ZP_05572869.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1]
 gi|257081521|ref|ZP_05575882.1| ribosomal protein S13 [Enterococcus faecalis E1Sol]
 gi|257084169|ref|ZP_05578530.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1]
 gi|257087996|ref|ZP_05582357.1| ribosomal protein S13 [Enterococcus faecalis D6]
 gi|257088673|ref|ZP_05583034.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188]
 gi|257417599|ref|ZP_05594593.1| ribosomal protein S13 [Enterococcus faecalis AR01/DG]
 gi|257418675|ref|ZP_05595669.1| 30S ribosomal protein S13 [Enterococcus faecalis T11]
 gi|257421523|ref|ZP_05598513.1| 30S ribosomal protein S13 [Enterococcus faecalis X98]
 gi|293382734|ref|ZP_06628659.1| 30S ribosomal protein S13 [Enterococcus faecalis R712]
 gi|293388083|ref|ZP_06632611.1| 30S ribosomal protein S13 [Enterococcus faecalis S613]
 gi|294781075|ref|ZP_06746426.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1]
 gi|300862068|ref|ZP_07108148.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11]
 gi|307269111|ref|ZP_07550472.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248]
 gi|307274195|ref|ZP_07555403.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855]
 gi|307276420|ref|ZP_07557543.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134]
 gi|307278630|ref|ZP_07559700.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860]
 gi|307286990|ref|ZP_07567065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109]
 gi|307291669|ref|ZP_07571544.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411]
 gi|312901098|ref|ZP_07760386.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470]
 gi|312904660|ref|ZP_07763815.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635]
 gi|312908629|ref|ZP_07767571.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512]
 gi|312909223|ref|ZP_07768080.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516]
 gi|312952631|ref|ZP_07771495.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102]
 gi|32363226|sp|P59754|RS13_ENTFA RecName: Full=30S ribosomal protein S13
 gi|29342333|gb|AAO80099.1| ribosomal protein S13 [Enterococcus faecalis V583]
 gi|227072564|gb|EEI10527.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104]
 gi|227175044|gb|EEI56016.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22]
 gi|229304248|gb|EEN70244.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200]
 gi|229307868|gb|EEN73855.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322]
 gi|255962751|gb|EET95227.1| ribosomal protein S13 [Enterococcus faecalis T1]
 gi|255967605|gb|EET98227.1| ribosomal protein S13 [Enterococcus faecalis T2]
 gi|256597883|gb|EEU17059.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200]
 gi|256683279|gb|EEU22974.1| ribosomal protein S13 [Enterococcus faecalis T3]
 gi|256709700|gb|EEU24747.1| ribosomal protein S13 [Enterococcus faecalis T8]
 gi|256947334|gb|EEU63966.1| ribosomal protein S13 [Enterococcus faecalis DS5]
 gi|256951141|gb|EEU67773.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96]
 gi|256954652|gb|EEU71284.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704]
 gi|256986538|gb|EEU73840.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1]
 gi|256989551|gb|EEU76853.1| ribosomal protein S13 [Enterococcus faecalis E1Sol]
 gi|256992199|gb|EEU79501.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1]
 gi|256996026|gb|EEU83328.1| ribosomal protein S13 [Enterococcus faecalis D6]
 gi|256997485|gb|EEU84005.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188]
 gi|257159427|gb|EEU89387.1| ribosomal protein S13 [Enterococcus faecalis ARO1/DG]
 gi|257160503|gb|EEU90463.1| 30S ribosomal protein S13 [Enterococcus faecalis T11]
 gi|257163347|gb|EEU93307.1| 30S ribosomal protein S13 [Enterococcus faecalis X98]
 gi|291079894|gb|EFE17258.1| 30S ribosomal protein S13 [Enterococcus faecalis R712]
 gi|291082534|gb|EFE19497.1| 30S ribosomal protein S13 [Enterococcus faecalis S613]
 gi|294451878|gb|EFG20329.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1]
 gi|295112522|emb|CBL31159.1| SSU ribosomal protein S13P [Enterococcus sp. 7L76]
 gi|300848593|gb|EFK76350.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11]
 gi|306497288|gb|EFM66830.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411]
 gi|306501936|gb|EFM71225.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109]
 gi|306504690|gb|EFM73890.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860]
 gi|306506900|gb|EFM76047.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134]
 gi|306509157|gb|EFM78219.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855]
 gi|306514591|gb|EFM83145.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248]
 gi|310625416|gb|EFQ08699.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512]
 gi|310629419|gb|EFQ12702.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102]
 gi|310632012|gb|EFQ15295.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635]
 gi|311290465|gb|EFQ69021.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516]
 gi|311291770|gb|EFQ70326.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470]
 gi|315026811|gb|EFT38743.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2137]
 gi|315028852|gb|EFT40784.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4000]
 gi|315031163|gb|EFT43095.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0017]
 gi|315035991|gb|EFT47923.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0027]
 gi|315147147|gb|EFT91163.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4244]
 gi|315151095|gb|EFT95111.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0012]
 gi|315153585|gb|EFT97601.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0031]
 gi|315156235|gb|EFU00252.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0043]
 gi|315158620|gb|EFU02637.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0312]
 gi|315160751|gb|EFU04768.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0645]
 gi|315165878|gb|EFU09895.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1302]
 gi|315168124|gb|EFU12141.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1341]
 gi|315171436|gb|EFU15453.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1342]
 gi|315172670|gb|EFU16687.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1346]
 gi|315573538|gb|EFU85729.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309B]
 gi|315579350|gb|EFU91541.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0630]
 gi|315582114|gb|EFU94305.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309A]
 gi|323479446|gb|ADX78885.1| 30S ribosomal protein S13 [Enterococcus faecalis 62]
 gi|327534028|gb|AEA92862.1| 30S ribosomal protein S13 [Enterococcus faecalis OG1RF]
 gi|329577725|gb|EGG59151.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1467]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ +   + +  + RV  L   +   IR  I
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRK 110


>gi|152964682|ref|YP_001360466.1| 30S ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
 gi|189044279|sp|A6W5W3|RS13_KINRD RecName: Full=30S ribosomal protein S13
 gi|151359199|gb|ABS02202.1| ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
          Length = 126

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +++      + P+ RV  L + +++ +R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRAKETLAATGVSPDLRVRDLSDDDLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYRVEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|254391368|ref|ZP_05006571.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|294814492|ref|ZP_06773135.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|326442881|ref|ZP_08217615.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|197705058|gb|EDY50870.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|294327091|gb|EFG08734.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
          Length = 126

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   +Q+      + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLAQETLAATGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|302543336|ref|ZP_07295678.1| 30S ribosomal protein S13 [Streptomyces hygroscopicus ATCC 53653]
 gi|302460954|gb|EFL24047.1| 30S ribosomal protein S13 [Streptomyces himastatinicus ATCC 53653]
          Length = 126

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|322388378|ref|ZP_08061981.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779]
 gi|322391222|ref|ZP_08064694.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780]
 gi|321140691|gb|EFX36193.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779]
 gi|321145975|gb|EFX41364.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780]
          Length = 121

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +SQ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGVSEDIRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|323344660|ref|ZP_08084884.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269]
 gi|323093930|gb|EFZ36507.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269]
          Length = 126

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWNDDQAAKIREIISA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|237742281|ref|ZP_04572762.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
 gi|256845560|ref|ZP_05551018.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
 gi|294785151|ref|ZP_06750439.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
 gi|229429929|gb|EEO40141.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
 gi|256719119|gb|EEU32674.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
 gi|294486865|gb|EFG34227.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
          Length = 118

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  +  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVK 110


>gi|257095018|ref|YP_003168659.1| 30S ribosomal protein S13 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047542|gb|ACV36730.1| ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 120

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +    AL  I+GIG   +Q IC+   +    ++  L E+E+ ++R  I
Sbjct: 1   MARIAGVNLPNHQHAEIALTAIYGIGRPRAQKICDAAGVTRSTKMKDLTEAELERLRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 61  GK-LSVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPSRGQRTRTNARTRK 110


>gi|116495923|ref|YP_807657.1| 30S ribosomal protein S13 [Lactobacillus casei ATCC 334]
 gi|191639405|ref|YP_001988571.1| 30S ribosomal protein S13 [Lactobacillus casei BL23]
 gi|227533983|ref|ZP_03964032.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239630328|ref|ZP_04673359.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067480|ref|YP_003789503.1| 30S ribosomal protein L13 [Lactobacillus casei str. Zhang]
 gi|122262677|sp|Q035A7|RS13_LACC3 RecName: Full=30S ribosomal protein S13
 gi|226712751|sp|B3WAJ4|RS13_LACCB RecName: Full=30S ribosomal protein S13
 gi|116106073|gb|ABJ71215.1| SSU ribosomal protein S13P [Lactobacillus casei ATCC 334]
 gi|190713707|emb|CAQ67713.1| 30S ribosomal protein S13 [Lactobacillus casei BL23]
 gi|227188360|gb|EEI68427.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239527940|gb|EEQ66941.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439887|gb|ADK19653.1| Ribosomal protein S13 [Lactobacillus casei str. Zhang]
 gi|327383493|gb|AEA54969.1| hypothetical protein LC2W_2639 [Lactobacillus casei LC2W]
 gi|327386686|gb|AEA58160.1| hypothetical protein LCBD_2666 [Lactobacillus casei BD-II]
          Length = 121

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P   R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKNAGVPENVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DS-VKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|295135679|ref|YP_003586355.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87]
 gi|294983694|gb|ADF54159.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87]
          Length = 124

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q+I  +  +   ++V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAQEILAEAKVDESKKVSDWNDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y +EG+LR  V M+IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  -GNYTIEGELRTEVQMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|305665114|ref|YP_003861401.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170]
 gi|88709866|gb|EAR02098.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170]
          Length = 124

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   S++I +K  +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRSKEILDKAQVSEDTKVSDWNDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  AL-YTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|297159622|gb|ADI09334.1| 30S ribosomal protein S13 [Streptomyces bingchenggensis BCW-1]
          Length = 126

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPRDKRVEVALTYVFGIGRTLAQQTLATTGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|224510714|pdb|3FIH|M Chain M, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
           Consists Of The 30s Subunit, Trnas And The Ternary
           Complex.
 gi|294662229|pdb|2WWL|M Chain M, E.Coli 70s Ribosome Stalled During Translation Of Tnac
           Leader Peptide. This File Contains The 30s, The P-Site
           Trna And The Tnac Leader Peptide (Part 1 Of 2).
 gi|308387998|pdb|3OFP|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|309320056|pdb|3OFB|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The Second 70s Ribosome.
 gi|309320160|pdb|3OFY|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome
 gi|315113645|pdb|3OAR|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome
          Length = 113

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109


>gi|171462902|ref|YP_001797015.1| ribosomal protein S13 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226712774|sp|B1XSS4|RS13_POLNS RecName: Full=30S ribosomal protein S13
 gi|171192440|gb|ACB43401.1| ribosomal protein S13 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 121

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I GIG   +  IC    +  +++V  L+++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIFGIGTTRAHQICKTTGVAIDKKVKDLIDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V M+IKRLMDLGCYRG+RHR+ LPVRGQRT TNARTRK   K GV  
Sbjct: 61  GK-FVTEGDLRREVTMSIKRLMDLGCYRGVRHRKDLPVRGQRTKTNARTRKGPRKSGVQL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|238916289|ref|YP_002929806.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC
           27750]
 gi|259494676|sp|C4Z2V4|RS13_EUBE2 RecName: Full=30S ribosomal protein S13
 gi|238871649|gb|ACR71359.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC
           27750]
          Length = 124

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 2/111 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG   +  I  +  + P+ RV  L + EV +I + I
Sbjct: 1   MARISGVDLPREKRIEIGLTYVYGIGRVRASKILEEAGVNPDTRVKDLTDEEVAKIAKVI 60

Query: 61  EQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           + D +  VEGDLRR VAMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART
Sbjct: 61  DADPEHLVEGDLRREVAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNART 111


>gi|237736195|ref|ZP_04566676.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817]
 gi|229421748|gb|EEO36795.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817]
          Length = 118

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR AI
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILTEAGINFDTRVKDLTEEEVNKIR-AI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 60  VETIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|298491420|ref|YP_003721597.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708]
 gi|298233338|gb|ADI64474.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708]
          Length = 126

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L YI+GIG   SQ+I     + P+ RV  L ++++  +R  I
Sbjct: 1   MARISGVDLPRDKRIEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLNDADIAALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQ 101


>gi|326799152|ref|YP_004316971.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21]
 gi|326549916|gb|ADZ78301.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21]
          Length = 125

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR V  L YI+GIG  +++ I  +  I  + +V +  + ++  IR  I
Sbjct: 1   MARIAGIDLPRNKRGVIGLTYIYGIGPSTAKSILAEAGIDEDTKVQEWTDDQLTAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLP+RGQRT  N+RTRK
Sbjct: 61  NDRVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111


>gi|194246757|ref|YP_002004396.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali]
 gi|254811160|sp|B3R015|RS13_PHYMT RecName: Full=30S ribosomal protein S13
 gi|193807114|emb|CAP18552.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali]
          Length = 127

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/113 (59%), Positives = 78/113 (69%), Gaps = 2/113 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL-AIPPERRVHQLVESEVIQIRQA 59
           MARIAGV IP  KRVV AL YI GIG K +Q+I + L  I    +V  L E  +I IR  
Sbjct: 1   MARIAGVEIPSNKRVVIALTYIRGIGIKKAQNILSDLKEIDINTKVEDLKEQHLIAIRNK 60

Query: 60  IEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+  +Y VEGDL+R VA+NIKRLM+ G YRGLRHR+GLP RGQ T  NART K
Sbjct: 61  IQNGNYLVEGDLKREVALNIKRLMENGSYRGLRHRKGLPSRGQNTRNNARTIK 113


>gi|215432431|ref|ZP_03430350.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
 gi|289755593|ref|ZP_06514971.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
 gi|289696180|gb|EFD63609.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
          Length = 124

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E D +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK
Sbjct: 61  EADLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111


>gi|294669846|ref|ZP_06734905.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308239|gb|EFE49482.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 120

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I    +V  L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKLICAATGIEGSTKVKDLDENQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q Y+VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  LQ-YEVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRK 110


>gi|282860836|ref|ZP_06269902.1| ribosomal protein S13 [Streptomyces sp. ACTE]
 gi|282564572|gb|EFB70108.1| ribosomal protein S13 [Streptomyces sp. ACTE]
          Length = 126

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILATTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|45644718|gb|AAS73106.1| predicted ribosomal protein S13 [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 118

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V  +L +I GIG K++Q+IC  L I   +++  L E E+  IR AI
Sbjct: 1   MARIAGVNIPENKHVEISLTHIFGIGRKTAQNICIDLKIDYTKKISDLSEEEIESIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR ++ NIKRL DL  YRG+RHRR LP RGQ T  NARTRK
Sbjct: 61  -GNYVVEGDLRRNISTNIKRLQDLASYRGIRHRRKLPTRGQNTKNNARTRK 110


>gi|317125843|ref|YP_004099955.1| 30S ribosomal protein S13P [Intrasporangium calvum DSM 43043]
 gi|315589931|gb|ADU49228.1| SSU ribosomal protein S13P [Intrasporangium calvum DSM 43043]
          Length = 124

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G   S++      + P+ RV  L ++E++ +R  +
Sbjct: 1   MARLVGVDLPRDKRVEVALTYIFGVGRTRSKEALAATGVSPDTRVKDLGDAELVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNYRLEGDLRREVQSDIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|326793580|ref|YP_004311400.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1]
 gi|326544344|gb|ADZ89564.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1]
          Length = 118

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRSICAATGVAETAKIGSLSDEVLDQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  -ANYTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRK 110


>gi|288803957|ref|ZP_06409380.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18]
 gi|302345098|ref|YP_003813451.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845]
 gi|288333590|gb|EFC72042.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18]
 gi|302149822|gb|ADK96084.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845]
          Length = 126

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|210631177|ref|ZP_03296788.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279]
 gi|210160144|gb|EEA91115.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279]
          Length = 124

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR    L YI+GIG  ++  +C  L I    R+  L E ++  IR  I
Sbjct: 1   MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++   VEGDLRR  + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 61  DKNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 112


>gi|261378063|ref|ZP_05982636.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685]
 gi|269145513|gb|EEZ71931.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685]
          Length = 120

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|33357890|pdb|1P6G|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
           State Of E. Coli 70s Ribosome
 gi|33357967|pdb|1P87|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The
           Initiation-Like State Of E. Coli 70s Ribosome
 gi|83754051|pdb|2AVY|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|83754107|pdb|2AW7|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes And Is
           Described In Remark 400.
 gi|118138065|pdb|2I2P|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|118138136|pdb|2I2U|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|157836035|pdb|2QOU|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The First 70s Ribosome,
           With Spectinomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|157836092|pdb|2QOW|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome, With Spectinomycin Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|157836139|pdb|2QOY|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|157836196|pdb|2QP0|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|158429710|pdb|2QAL|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Neomycin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429762|pdb|2QAN|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Neomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429820|pdb|2QB9|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Gentamicin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429872|pdb|2QBB|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Gentamicin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429924|pdb|2QBD|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           First 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429976|pdb|2QBF|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158430030|pdb|2QBH|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The First 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430083|pdb|2QBJ|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The Second 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431383|pdb|2Z4K|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The First 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431436|pdb|2Z4M|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The Second 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|168988800|pdb|2VHO|M Chain M, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 3 Of 4)
 gi|168988821|pdb|2VHP|M Chain M, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 4 Of 4)
 gi|197107290|pdb|3DF1|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|197107342|pdb|3DF3|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|329666004|pdb|3J00|M Chain M, Structure Of The Ribosome-Secye Complex In The Membrane
           Environment
          Length = 117

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109


>gi|332076678|gb|EGI87140.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17545]
          Length = 129

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|119484811|ref|ZP_01619293.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106]
 gi|119457629|gb|EAW38753.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106]
          Length = 127

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L ++EV  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILKETGVNPDTRVKDLSDAEVAALRTLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           +  YQVEGDLRR  AMNIKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QGQYQVEGDLRRWEAMNIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|313206372|ref|YP_004045549.1| SSU ribosomal protein s13p [Riemerella anatipestifer DSM 15868]
 gi|312445688|gb|ADQ82043.1| SSU ribosomal protein S13P [Riemerella anatipestifer DSM 15868]
 gi|315023687|gb|EFT36691.1| SSU ribosomal protein S13p (S18e) [Riemerella anatipestifer RA-YM]
 gi|325336182|gb|ADZ12456.1| Ribosomal protein S13 [Riemerella anatipestifer RA-GD]
          Length = 125

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI+GIG  ++ +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIYGIGKSTASEILKNAGISEDKKVNEWNDDELAAIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SENIKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111


>gi|308387977|pdb|3OFO|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|309320035|pdb|3OFA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The First 70s Ribosome.
 gi|309320139|pdb|3OFX|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|315113624|pdb|3OAQ|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome
          Length = 114

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109


>gi|282878781|ref|ZP_06287549.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310]
 gi|317503957|ref|ZP_07961965.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606]
 gi|281299172|gb|EFA91573.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310]
 gi|315664983|gb|EFV04642.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606]
          Length = 126

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|297564063|ref|YP_003683036.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848512|gb|ADH70530.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 126

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI GIG   + +      +    RV++L E +++++R+ I
Sbjct: 1   MARIEGVDLPRDKRVEIALTYIFGIGRTRALETLKSTGVDGNTRVYELTEEDLVKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
             +YQVEGDLRR V  +I+R M++G Y+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  GSNYQVEGDLRREVQGDIRRKMEIGSYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 [Streptococcus suis 05ZYH33]
 gi|146319944|ref|YP_001199655.1| 30S ribosomal protein S13 [Streptococcus suis 98HAH33]
 gi|223933082|ref|ZP_03625075.1| ribosomal protein S13 [Streptococcus suis 89/1591]
 gi|253751013|ref|YP_003024154.1| 30S ribosomal protein S13 [Streptococcus suis SC84]
 gi|253752913|ref|YP_003026053.1| 30S ribosomal protein S13 [Streptococcus suis P1/7]
 gi|253754738|ref|YP_003027878.1| 30S ribosomal protein S13 [Streptococcus suis BM407]
 gi|330831944|ref|YP_004400769.1| 30S ribosomal protein S13 [Streptococcus suis ST3]
 gi|158706285|sp|A4VYR6|RS13_STRS2 RecName: Full=30S ribosomal protein S13
 gi|158706287|sp|A4VSH6|RS13_STRSY RecName: Full=30S ribosomal protein S13
 gi|145688559|gb|ABP89065.1| Ribosomal protein S13 [Streptococcus suis 05ZYH33]
 gi|145690750|gb|ABP91255.1| Ribosomal protein S13 [Streptococcus suis 98HAH33]
 gi|223898269|gb|EEF64637.1| ribosomal protein S13 [Streptococcus suis 89/1591]
 gi|251815302|emb|CAZ50870.1| 30S ribosomal protein S13 [Streptococcus suis SC84]
 gi|251817202|emb|CAZ54925.1| 30S ribosomal protein S13 [Streptococcus suis BM407]
 gi|251819158|emb|CAR44290.1| 30S ribosomal protein S13 [Streptococcus suis P1/7]
 gi|292557555|gb|ADE30556.1| ribosomal protein S13 [Streptococcus suis GZ1]
 gi|319757264|gb|ADV69206.1| 30S ribosomal protein S13 [Streptococcus suis JS14]
 gi|329306167|gb|AEB80583.1| 30S ribosomal protein S13 [Streptococcus suis ST3]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|54022801|ref|YP_117043.1| 30S ribosomal protein S13 [Nocardia farcinica IFM 10152]
 gi|81375955|sp|Q5Z1L2|RS13_NOCFA RecName: Full=30S ribosomal protein S13
 gi|54014309|dbj|BAD55679.1| putative ribosomal protein S13 [Nocardia farcinica IFM 10152]
          Length = 123

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 82/112 (73%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S++I     + P+ R   L + ++ ++R  I
Sbjct: 1   MARLMGVDLPREKRMEIALTYIYGIGRTRSKEILEATGVSPDLRSKDLSDDDLTKLRDYI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EASEFKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 112


>gi|282880977|ref|ZP_06289668.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1]
 gi|281305200|gb|EFA97269.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +   IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRDLKVSEWTDDQAASIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|299138170|ref|ZP_07031350.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8]
 gi|298600100|gb|EFI56258.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+   AL YI+GIG   +  I     I P  ++  L E ++  IRQ I
Sbjct: 1   MARIAGVDLPGNKQARIALTYIYGIGDPRALRILTAAGIDPLAKMGTLDEDQLNAIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EKEGGIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|186477564|ref|YP_001859034.1| 30S ribosomal protein S13 [Burkholderia phymatum STM815]
 gi|209521363|ref|ZP_03270076.1| ribosomal protein S13 [Burkholderia sp. H160]
 gi|295677909|ref|YP_003606433.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002]
 gi|226712708|sp|B2JI42|RS13_BURP8 RecName: Full=30S ribosomal protein S13
 gi|184194023|gb|ACC71988.1| ribosomal protein S13 [Burkholderia phymatum STM815]
 gi|209498183|gb|EDZ98325.1| ribosomal protein S13 [Burkholderia sp. H160]
 gi|295437752|gb|ADG16922.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+GIG   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|146298138|ref|YP_001192729.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101]
 gi|189040502|sp|A5FN18|RS13_FLAJO RecName: Full=30S ribosomal protein S13
 gi|146152556|gb|ABQ03410.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101]
          Length = 124

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + +I  K  +  +++V    + E+  IR A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGLGKSRAIEILEKAQVSQDKKVQDWNDDEIGAIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SF-YKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|307565118|ref|ZP_07627626.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A]
 gi|307346149|gb|EFN91478.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDEQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|54778766|gb|AAV39600.1| ribosomal protein S13 [synthetic construct]
          Length = 145

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 26  ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 85

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 86  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 134


>gi|284040597|ref|YP_003390527.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
 gi|283819890|gb|ADB41728.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
          Length = 125

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR   AL YI GIG   ++ I     I  +++  +  + E   +R AI
Sbjct: 1   MARIAGVDIPDKKRGEIALTYIFGIGRSRAKKILTDAGISVDKKASEWSDEEASAVRNAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEG LR  V ++IKRLMD+GCYRGLRHR+GLPVRGQ T  N+RTRK
Sbjct: 61  SNEYKVEGQLRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQHTKNNSRTRK 111


>gi|259502554|ref|ZP_05745456.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041]
 gi|259169506|gb|EEW54001.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVVGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|251781542|ref|YP_002995843.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390170|dbj|BAH80629.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|322410882|gb|EFY01790.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
 gi|323126335|gb|ADX23632.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|120609323|ref|YP_969001.1| 30S ribosomal protein S13 [Acidovorax citrulli AAC00-1]
 gi|326315412|ref|YP_004233084.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|158706206|sp|A1TJT9|RS13_ACIAC RecName: Full=30S ribosomal protein S13
 gi|120587787|gb|ABM31227.1| SSU ribosomal protein S13P [Acidovorax citrulli AAC00-1]
 gi|323372248|gb|ADX44517.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEACGIAYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163790170|ref|ZP_02184604.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7]
 gi|159874661|gb|EDP68731.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV+ +L YI+GIG  ++Q +     +  E RV  L   ++  IR  I
Sbjct: 1   MARIAGVDIPRDKRVIISLTYIYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSITGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116667422|pdb|2GY9|M Chain M, Structure Of The 30s Subunit Of A Pre-Translocational E.
           Coli Ribosome Obtained By Fitting Atomic Models For Rna
           And Protein Components Into Cryo-Em Map Emd-1056
 gi|116667474|pdb|2GYB|M Chain M, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
           Ribosome Complex Obtained By Fitting Atomic Models For
           Rna And Protein Components Into Cryo-Em Map Emd-1143
          Length = 115

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 109


>gi|298207750|ref|YP_003715929.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559]
 gi|83850388|gb|EAP88256.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559]
          Length = 124

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q++     +  +++V    + E+ +IRQ +
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEVLKNANVSEDKKVSDWNDEEISRIRQQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + +EG+LR  V+++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GQ-FTIEGELRTEVSLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|227543599|ref|ZP_03973648.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A]
 gi|300909372|ref|ZP_07126833.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112]
 gi|154705526|gb|ABS84189.1| ribosomal protein S13p [Lactobacillus reuteri]
 gi|227186439|gb|EEI66510.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A]
 gi|300893237|gb|EFK86596.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVVGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|300775036|ref|ZP_07084899.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910]
 gi|300506851|gb|EFK37986.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910]
          Length = 125

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI+G+G  +S +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIYGVGRSTSSEILKAAGISEDKKVNEWNDDELAAIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SENVKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111


>gi|75906936|ref|YP_321232.1| 30S ribosomal protein S13 [Anabaena variabilis ATCC 29413]
 gi|91207688|sp|Q3MF99|RS13_ANAVT RecName: Full=30S ribosomal protein S13
 gi|75700661|gb|ABA20337.1| SSU ribosomal protein S13P [Anabaena variabilis ATCC 29413]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ+I     + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLSDADVAALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQ 101


>gi|302558969|ref|ZP_07311311.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000]
 gi|302476587|gb|EFL39680.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       I P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGIDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|166367997|ref|YP_001660270.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843]
 gi|189044281|sp|B0JY40|RS13_MICAN RecName: Full=30S ribosomal protein S13
 gi|159027083|emb|CAO89268.1| rpsM [Microcystis aeruginosa PCC 7806]
 gi|166090370|dbj|BAG05078.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843]
          Length = 127

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++G+G   SQ++ +   + P+ RV  L + +V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR GLPVRGQ
Sbjct: 61  ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQ 101


>gi|331702056|ref|YP_004399015.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929]
 gi|329129399|gb|AEB73952.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929]
          Length = 120

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG  ++Q +  K  +  + RV  L   +  +IR+ +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIFGIGNTTAQKVLAKAGVSEDVRVRDLTPDQEDKIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  -GDLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|320009077|gb|ADW03927.1| 30S ribosomal protein S13 [Streptomyces flavogriseus ATCC 33331]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAAAGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|237744172|ref|ZP_04574653.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
 gi|256027713|ref|ZP_05441547.1| 30S ribosomal protein S13 [Fusobacterium sp. D11]
 gi|260494242|ref|ZP_05814373.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
 gi|289765672|ref|ZP_06525050.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
 gi|229431401|gb|EEO41613.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
 gi|260198388|gb|EEW95904.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
 gi|289717227|gb|EFD81239.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
          Length = 118

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  +  + RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVK 110


>gi|56751895|ref|YP_172596.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|81301020|ref|YP_401228.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 7942]
 gi|3122786|sp|O24708|RS13_SYNP6 RecName: Full=30S ribosomal protein S13
 gi|123556372|sp|Q31L28|RS13_SYNE7 RecName: Full=30S ribosomal protein S13
 gi|2446911|dbj|BAA22470.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|56686854|dbj|BAD80076.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|81169901|gb|ABB58241.1| SSU ribosomal protein S13P [Synechococcus elongatus PCC 7942]
          Length = 125

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG   +++I  K  + P+ R+  L +SEV  +RQ +
Sbjct: 1   MARIAGVDLPRDKRAEIGLTYIYGIGPTRAKEILAKTGVSPDTRIKDLNDSEVAALRQVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E DYQVEGDLRR  AM+IKRLMD+G  RG RHR GLPVRGQ
Sbjct: 61  ENDYQVEGDLRRLEAMSIKRLMDIGTVRGRRHRAGLPVRGQ 101


>gi|288801122|ref|ZP_06406578.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332056|gb|EFC70538.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRK 112


>gi|21223106|ref|NP_628885.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)]
 gi|256785798|ref|ZP_05524229.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
 gi|289769690|ref|ZP_06529068.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
 gi|6226063|sp|O86773|RS13_STRCO RecName: Full=30S ribosomal protein S13
 gi|3449239|emb|CAA20383.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)]
 gi|289699889|gb|EFD67318.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
          Length = 126

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|23492405|dbj|BAC17379.1| putative 30S ribosomal protein S13 [Corynebacterium efficiens
           YS-314]
          Length = 142

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  I
Sbjct: 21  MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 80

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 81  EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 131


>gi|15900170|ref|NP_344774.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TIGR4]
 gi|15902257|ref|NP_357807.1| 30S ribosomal protein S13 [Streptococcus pneumoniae R6]
 gi|111658778|ref|ZP_01409409.1| hypothetical protein SpneT_02000075 [Streptococcus pneumoniae
           TIGR4]
 gi|116516047|ref|YP_815735.1| 30S ribosomal protein S13 [Streptococcus pneumoniae D39]
 gi|148983633|ref|ZP_01816952.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
 gi|148987971|ref|ZP_01819434.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
 gi|148992811|ref|ZP_01822454.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
 gi|148996656|ref|ZP_01824374.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
 gi|149005985|ref|ZP_01829714.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
 gi|149011104|ref|ZP_01832409.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
 gi|149017924|ref|ZP_01834383.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
 gi|168483871|ref|ZP_02708823.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00]
 gi|168485999|ref|ZP_02710507.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00]
 gi|168489711|ref|ZP_02713910.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195]
 gi|168492188|ref|ZP_02716331.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04]
 gi|168493928|ref|ZP_02718071.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06]
 gi|168576339|ref|ZP_02722222.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016]
 gi|169833118|ref|YP_001693765.1| 30S ribosomal protein S13 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683211|ref|YP_001834958.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14]
 gi|221231136|ref|YP_002510288.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669]
 gi|225853839|ref|YP_002735351.1| 30S ribosomal protein S13 [Streptococcus pneumoniae JJA]
 gi|225855998|ref|YP_002737509.1| 30S ribosomal protein S13 [Streptococcus pneumoniae P1031]
 gi|225858087|ref|YP_002739597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae 70585]
 gi|237649699|ref|ZP_04523951.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974]
 gi|237821397|ref|ZP_04597242.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974M2]
 gi|270292024|ref|ZP_06198239.1| ribosomal protein S13 [Streptococcus sp. M143]
 gi|289168708|ref|YP_003446977.1| 30S ribosomal protein S13 [Streptococcus mitis B6]
 gi|293364324|ref|ZP_06611050.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|298230390|ref|ZP_06964071.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256011|ref|ZP_06979597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502047|ref|YP_003723987.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A]
 gi|303255071|ref|ZP_07341147.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455]
 gi|303259285|ref|ZP_07345263.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293]
 gi|303261040|ref|ZP_07346989.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292]
 gi|303263368|ref|ZP_07349291.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397]
 gi|303265533|ref|ZP_07351433.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457]
 gi|303267909|ref|ZP_07353711.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458]
 gi|306825963|ref|ZP_07459299.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306828806|ref|ZP_07461998.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249]
 gi|307066911|ref|YP_003875877.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200]
 gi|307126452|ref|YP_003878483.1| 30S ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B]
 gi|307702709|ref|ZP_07639661.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|307704088|ref|ZP_07641017.1| 30S ribosomal protein S13 [Streptococcus mitis SK597]
 gi|307708083|ref|ZP_07644551.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261]
 gi|307709934|ref|ZP_07646381.1| 30S ribosomal protein S13 [Streptococcus mitis SK564]
 gi|307711032|ref|ZP_07647454.1| 30S ribosomal protein S13 [Streptococcus mitis SK321]
 gi|315612355|ref|ZP_07887268.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296]
 gi|322375016|ref|ZP_08049530.1| 30S ribosomal protein S13 [Streptococcus sp. C300]
 gi|322377207|ref|ZP_08051699.1| 30S ribosomal protein S13 [Streptococcus sp. M334]
 gi|331267111|ref|YP_004326741.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5]
 gi|54039354|sp|P66393|RS13_STRR6 RecName: Full=30S ribosomal protein S13
 gi|54042125|sp|P66392|RS13_STRPN RecName: Full=30S ribosomal protein S13
 gi|122279379|sp|Q04ML3|RS13_STRP2 RecName: Full=30S ribosomal protein S13
 gi|226712791|sp|B1I8M2|RS13_STRPI RecName: Full=30S ribosomal protein S13
 gi|226712792|sp|B2IS65|RS13_STRPS RecName: Full=30S ribosomal protein S13
 gi|254811167|sp|C1CAN6|RS13_STRP7 RecName: Full=30S ribosomal protein S13
 gi|254811168|sp|B8ZKQ3|RS13_STRPJ RecName: Full=30S ribosomal protein S13
 gi|254811170|sp|C1CC30|RS13_STRZJ RecName: Full=30S ribosomal protein S13
 gi|254811171|sp|C1CIC1|RS13_STRZP RecName: Full=30S ribosomal protein S13
 gi|14971703|gb|AAK74414.1| ribosomal protein S13 [Streptococcus pneumoniae TIGR4]
 gi|15457758|gb|AAK99017.1| 30S Ribosomal protein S13 [Streptococcus pneumoniae R6]
 gi|116076623|gb|ABJ54343.1| ribosomal protein S13 [Streptococcus pneumoniae D39]
 gi|147757231|gb|EDK64270.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
 gi|147762341|gb|EDK69302.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
 gi|147764740|gb|EDK71670.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
 gi|147923780|gb|EDK74892.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
 gi|147926435|gb|EDK77508.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
 gi|147928537|gb|EDK79552.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
 gi|147931488|gb|EDK82466.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
 gi|168995620|gb|ACA36232.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae Hungary19A-6]
 gi|172042881|gb|EDT50927.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00]
 gi|182628545|gb|ACB89493.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14]
 gi|183570892|gb|EDT91420.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00]
 gi|183571844|gb|EDT92372.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195]
 gi|183573602|gb|EDT94130.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04]
 gi|183576250|gb|EDT96778.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06]
 gi|183577820|gb|EDT98348.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016]
 gi|220673596|emb|CAR68082.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669]
 gi|225720993|gb|ACO16847.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 70585]
 gi|225723327|gb|ACO19180.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae JJA]
 gi|225725374|gb|ACO21226.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae P1031]
 gi|270279552|gb|EFA25394.1| ribosomal protein S13 [Streptococcus sp. M143]
 gi|288908275|emb|CBJ23117.1| 30S ribosomal protein S13 [Streptococcus mitis B6]
 gi|291317170|gb|EFE57597.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|298237642|gb|ADI68773.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A]
 gi|301793505|emb|CBW35878.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV104]
 gi|301799381|emb|CBW31916.1| 30S ribosomal protein S13 [Streptococcus pneumoniae OXC141]
 gi|301801176|emb|CBW33849.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV200]
 gi|302597901|gb|EFL64971.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455]
 gi|302637877|gb|EFL68363.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292]
 gi|302639703|gb|EFL70160.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293]
 gi|302642605|gb|EFL72950.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458]
 gi|302644973|gb|EFL75220.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457]
 gi|302647141|gb|EFL77365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397]
 gi|304428984|gb|EFM32072.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249]
 gi|304431679|gb|EFM34659.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306408448|gb|ADM83875.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200]
 gi|306483514|gb|ADM90383.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B]
 gi|307615868|gb|EFN95073.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261]
 gi|307616994|gb|EFN96172.1| 30S ribosomal protein S13 [Streptococcus mitis SK321]
 gi|307619305|gb|EFN98434.1| 30S ribosomal protein S13 [Streptococcus mitis SK564]
 gi|307622378|gb|EFO01386.1| 30S ribosomal protein S13 [Streptococcus mitis SK597]
 gi|307623825|gb|EFO02810.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|315315336|gb|EFU63375.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296]
 gi|321280516|gb|EFX57555.1| 30S ribosomal protein S13 [Streptococcus sp. C300]
 gi|321281920|gb|EFX58928.1| 30S ribosomal protein S13 [Streptococcus sp. M334]
 gi|326683783|emb|CBZ01401.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5]
 gi|327390651|gb|EGE88991.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA04375]
 gi|332075898|gb|EGI86365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17570]
 gi|332077534|gb|EGI87995.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA41301]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|148544672|ref|YP_001272042.1| 30S ribosomal protein S13 [Lactobacillus reuteri DSM 20016]
 gi|184154025|ref|YP_001842366.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112]
 gi|227363795|ref|ZP_03847902.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3]
 gi|325683006|ref|ZP_08162522.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A]
 gi|166991600|sp|A5VLI1|RS13_LACRD RecName: Full=30S ribosomal protein S13
 gi|226712753|sp|B2G8V4|RS13_LACRJ RecName: Full=30S ribosomal protein S13
 gi|148531706|gb|ABQ83705.1| SSU ribosomal protein S13P [Lactobacillus reuteri DSM 20016]
 gi|183225369|dbj|BAG25886.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112]
 gi|227071152|gb|EEI09468.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3]
 gi|324977356|gb|EGC14307.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A]
          Length = 121

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|312870485|ref|ZP_07730604.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3]
 gi|311093947|gb|EFQ52272.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3]
          Length = 121

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|300867113|ref|ZP_07111779.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506]
 gi|300334868|emb|CBN56945.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506]
          Length = 127

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S +I +   + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSHEILSATGVNPDTRVKDLSDADVTALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  +MNIKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  ETNYQVEGDLRRLESMNIKRLMDIGTYRGRRHRLGLPVRGQ 101


>gi|17231685|ref|NP_488233.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120]
 gi|32363371|sp|Q8YPK1|RS13_ANASP RecName: Full=30S ribosomal protein S13
 gi|17133328|dbj|BAB75892.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120]
          Length = 126

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ+I     + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEIIAATGVNPDTRVKDLSDADVAALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQ 101


>gi|121603257|ref|YP_980586.1| 30S ribosomal protein S13 [Polaromonas naphthalenivorans CJ2]
 gi|158706258|sp|A1VJ37|RS13_POLNA RecName: Full=30S ribosomal protein S13
 gi|120592226|gb|ABM35665.1| SSU ribosomal protein S13P [Polaromonas naphthalenivorans CJ2]
          Length = 121

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L +S++ +IR  I
Sbjct: 1   MARIAGINIPPQKHAEIGLTAIFGIGRTRARKICEACEIDYAKKIKDLTDSDLEKIRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   + 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|322386330|ref|ZP_08059960.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100]
 gi|321269554|gb|EFX52484.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100]
          Length = 121

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|260592741|ref|ZP_05858199.1| 30S ribosomal protein S13 [Prevotella veroralis F0319]
 gi|260535272|gb|EEX17889.1| 30S ribosomal protein S13 [Prevotella veroralis F0319]
          Length = 146

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 24  RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREIIGA 83

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 84  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 132


>gi|84515658|ref|ZP_01003019.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53]
 gi|84510100|gb|EAQ06556.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53]
          Length = 104

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 73/104 (70%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           + YI GIG   ++ IC    I   RRV+ L ++E++ IR+ I+ +  VEGDLRR   MNI
Sbjct: 1   MTYITGIGPAIAEQICEATNIDRARRVNDLSDAEILTIREFIDANLTVEGDLRRETQMNI 60

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K+
Sbjct: 61  KRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKKK 104


>gi|323527579|ref|YP_004229732.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001]
 gi|323384581|gb|ADX56672.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+G+G   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|150025384|ref|YP_001296210.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86]
 gi|158706230|sp|A6GZ76|RS13_FLAPJ RecName: Full=30S ribosomal protein S13
 gi|149771925|emb|CAL43399.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86]
          Length = 124

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + ++  K  +  +++V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGVGRSRAIEVLEKAQVSQDKKVQDWNDDEIGGIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SF-YKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|194466929|ref|ZP_03072916.1| ribosomal protein S13 [Lactobacillus reuteri 100-23]
 gi|194453965|gb|EDX42862.1| ribosomal protein S13 [Lactobacillus reuteri 100-23]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|189501187|ref|YP_001960657.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides BS1]
 gi|226712713|sp|B3EP37|RS13_CHLPB RecName: Full=30S ribosomal protein S13
 gi|189496628|gb|ACE05176.1| ribosomal protein S13 [Chlorobium phaeobacteroides BS1]
          Length = 125

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +I+GIG  S+++I  ++ I P R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHIYGIGKTSAKNILERVGIDPARKISELNDEEAHSIREVIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DY VEG  R    +++KRLMD+GCYRGLRHRR LP RGQ T TNARTRK
Sbjct: 62  DYIVEGQARGEQQLSVKRLMDIGCYRGLRHRRSLPARGQNTQTNARTRK 110


>gi|264680563|ref|YP_003280473.1| ribosomal protein S13 [Comamonas testosteroni CNB-2]
 gi|299532873|ref|ZP_07046260.1| 30S ribosomal protein S13 [Comamonas testosteroni S44]
 gi|262211079|gb|ACY35177.1| ribosomal protein S13 [Comamonas testosteroni CNB-2]
 gi|298719097|gb|EFI60067.1| 30S ribosomal protein S13 [Comamonas testosteroni S44]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  +++ IC    I   ++V  L ++++ +IR  +
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIYGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  NP-MTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|308190156|ref|YP_003923087.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER]
 gi|319777460|ref|YP_004137111.1| 30S ribosomal protein s13 [Mycoplasma fermentans M64]
 gi|238810273|dbj|BAH70063.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624898|gb|ADN69203.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER]
 gi|318038535|gb|ADV34734.1| 30S ribosomal protein S13 [Mycoplasma fermentans M64]
          Length = 123

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG   +Q+IC K  I    RV  L E ++  IR+ +
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGRTRAQEICAKAKIDENLRVKDLSEEQLSAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y  EGDLRR  ++NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  AKEYTTEGDLRRETSLNIKRLMEIKCYRGIRHRKGLPVRGQCTQKNARTRK 110


>gi|115350345|ref|YP_772184.1| 30S ribosomal protein S13 [Burkholderia ambifaria AMMD]
 gi|134294466|ref|YP_001118201.1| 30S ribosomal protein S13 [Burkholderia vietnamiensis G4]
 gi|170700717|ref|ZP_02891712.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10]
 gi|171318371|ref|ZP_02907529.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5]
 gi|172059364|ref|YP_001807016.1| 30S ribosomal protein S13 [Burkholderia ambifaria MC40-6]
 gi|122324243|sp|Q0BJ23|RS13_BURCM RecName: Full=30S ribosomal protein S13
 gi|166231903|sp|A4JAR3|RS13_BURVG RecName: Full=30S ribosomal protein S13
 gi|226712704|sp|B1YRQ2|RS13_BURA4 RecName: Full=30S ribosomal protein S13
 gi|115280333|gb|ABI85850.1| SSU ribosomal protein S13P [Burkholderia ambifaria AMMD]
 gi|134137623|gb|ABO53366.1| SSU ribosomal protein S13P [Burkholderia vietnamiensis G4]
 gi|170134387|gb|EDT02720.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10]
 gi|171096449|gb|EDT41348.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5]
 gi|171991881|gb|ACB62800.1| ribosomal protein S13 [Burkholderia ambifaria MC40-6]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   S+ IC+   +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICSAAGVEFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|195977232|ref|YP_002122476.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225867689|ref|YP_002743637.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus]
 gi|225869560|ref|YP_002745507.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047]
 gi|226712787|sp|B4U524|RS13_STREM RecName: Full=30S ribosomal protein S13
 gi|254811166|sp|C0M7C5|RS13_STRE4 RecName: Full=30S ribosomal protein S13
 gi|259494691|sp|C0ME29|RS13_STRS7 RecName: Full=30S ribosomal protein S13
 gi|195973937|gb|ACG61463.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225698964|emb|CAW92011.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047]
 gi|225700965|emb|CAW97686.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|307154820|ref|YP_003890204.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822]
 gi|306985048|gb|ADN16929.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822]
          Length = 127

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   SQ+I  +  + P+ RV  L + +   +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSQEILAETGVNPDTRVKDLSDEDTAALRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  +MNIKRL+D+G YRG RHR+GLPVRGQ
Sbjct: 61  ETNYQIEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQ 101


>gi|288904297|ref|YP_003429518.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34]
 gi|306830326|ref|ZP_07463497.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306832571|ref|ZP_07465711.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338]
 gi|325977276|ref|YP_004286992.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731022|emb|CBI12566.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34]
 gi|304425329|gb|EFM28455.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338]
 gi|304427573|gb|EFM30674.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177204|emb|CBZ47248.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|281423815|ref|ZP_06254728.1| 30S ribosomal protein S13 [Prevotella oris F0302]
 gi|299141171|ref|ZP_07034308.1| 30S ribosomal protein S13 [Prevotella oris C735]
 gi|281402042|gb|EFB32873.1| 30S ribosomal protein S13 [Prevotella oris F0302]
 gi|298577131|gb|EFI49000.1| 30S ribosomal protein S13 [Prevotella oris C735]
          Length = 126

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|110598110|ref|ZP_01386388.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031]
 gi|110340242|gb|EAT58739.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031]
          Length = 125

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I P+R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRVSAENILQRAGIAPDRKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  SYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTSTNARTRK 110


>gi|329938207|ref|ZP_08287658.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045]
 gi|329302696|gb|EGG46586.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045]
          Length = 126

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|307328055|ref|ZP_07607236.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113]
 gi|306886360|gb|EFN17365.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113]
          Length = 126

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLGEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|145219085|ref|YP_001129794.1| 30S ribosomal protein S13 [Prosthecochloris vibrioformis DSM 265]
 gi|189044287|sp|A4SCT3|RS13_PROVI RecName: Full=30S ribosomal protein S13
 gi|145205249|gb|ABP36292.1| SSU ribosomal protein S13P [Chlorobium phaeovibrioides DSM 265]
          Length = 125

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  +++ I  +  I P+R++  L ++E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTTAKTILQRTGIAPDRKISDLNDAEAHSIRELIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEG  R    ++IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK
Sbjct: 62  EYKVEGQARGEQQLSIKRLMDVGCYRGLRHRRSLPVRGQNTQTNARTRK 110


>gi|322374069|ref|ZP_08048603.1| 30S ribosomal protein S13 [Streptococcus sp. C150]
 gi|321277035|gb|EFX54106.1| 30S ribosomal protein S13 [Streptococcus sp. C150]
          Length = 121

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLTTSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|126658011|ref|ZP_01729163.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110]
 gi|126620649|gb|EAZ91366.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110]
          Length = 127

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   SQ+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILEETGVNPDTRVRDLSDEDVAKLRACI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|304384299|ref|ZP_07366710.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973]
 gi|304334615|gb|EFM00897.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973]
          Length = 126

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V +  + +  +IR  I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIRGIISA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRTEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311]
 gi|55823797|ref|YP_142238.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066]
 gi|116628574|ref|YP_821193.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMD-9]
 gi|228478087|ref|ZP_04062698.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126]
 gi|312862416|ref|ZP_07722659.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396]
 gi|322515891|ref|ZP_08068833.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124]
 gi|81558873|sp|Q5LXT5|RS13_STRT1 RecName: Full=30S ribosomal protein S13
 gi|81560060|sp|Q5M2D7|RS13_STRT2 RecName: Full=30S ribosomal protein S13
 gi|122266832|sp|Q03IH5|RS13_STRTD RecName: Full=30S ribosomal protein S13
 gi|55737866|gb|AAV61508.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311]
 gi|55739782|gb|AAV63423.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066]
 gi|116101851|gb|ABJ66997.1| SSU ribosomal protein S13P [Streptococcus thermophilus LMD-9]
 gi|228250267|gb|EEK09520.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126]
 gi|311102059|gb|EFQ60259.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396]
 gi|312279235|gb|ADQ63892.1| 30S ribosomal protein S13 [Streptococcus thermophilus ND03]
 gi|322125678|gb|EFX97005.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124]
          Length = 121

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|239929489|ref|ZP_04686442.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
 gi|291437814|ref|ZP_06577204.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
 gi|291340709|gb|EFE67665.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
          Length = 126

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|329956726|ref|ZP_08297299.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056]
 gi|328524098|gb|EGF51174.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056]
          Length = 126

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
 gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1]
 gi|170289158|ref|YP_001739396.1| ribosomal protein S13 [Thermotoga sp. RQ2]
 gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
 gi|6831659|sp|Q9X1I5|RS13_THEMA RecName: Full=30S ribosomal protein S13
 gi|166231929|sp|A5IMA8|RS13_THEP1 RecName: Full=30S ribosomal protein S13
 gi|226712798|sp|B1LBL5|RS13_THESQ RecName: Full=30S ribosomal protein S13
 gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8]
 gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1]
 gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2]
 gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
          Length = 125

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+V  AL YI+GIG   S +I     I PE+RV  L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  ++VEG+LR  V  NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK
Sbjct: 61  QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRK 111


>gi|22536267|ref|NP_687118.1| 30S ribosomal protein S13 [Streptococcus agalactiae 2603V/R]
 gi|25010157|ref|NP_734552.1| 30S ribosomal protein S13 [Streptococcus agalactiae NEM316]
 gi|76788115|ref|YP_328807.1| 30S ribosomal protein S13 [Streptococcus agalactiae A909]
 gi|76798217|ref|ZP_00780467.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21]
 gi|77406112|ref|ZP_00783186.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B]
 gi|77412629|ref|ZP_00788908.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111]
 gi|54039353|sp|P66391|RS13_STRA5 RecName: Full=30S ribosomal protein S13
 gi|54042124|sp|P66390|RS13_STRA3 RecName: Full=30S ribosomal protein S13
 gi|91207627|sp|Q3K3U6|RS13_STRA1 RecName: Full=30S ribosomal protein S13
 gi|22533088|gb|AAM98990.1|AE014195_9 ribosomal protein S13 [Streptococcus agalactiae 2603V/R]
 gi|23094508|emb|CAD45727.1| ribosomal protein S13 [Streptococcus agalactiae NEM316]
 gi|76563172|gb|ABA45756.1| ribosomal protein S13 [Streptococcus agalactiae A909]
 gi|76586426|gb|EAO62934.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21]
 gi|77161321|gb|EAO72353.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111]
 gi|77175293|gb|EAO78088.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B]
 gi|319743971|gb|EFV96351.1| 30S ribosomal protein S13 [Streptococcus agalactiae ATCC 13813]
          Length = 121

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|50955542|ref|YP_062830.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81390583|sp|Q6AD19|RS13_LEIXX RecName: Full=30S ribosomal protein S13
 gi|50952024|gb|AAT89725.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 124

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +     +  I  E RV  L + +++ +R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGRTRALQTLRETEISGEIRVKDLTDEQLVSLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR VA +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRK 111


>gi|209527120|ref|ZP_03275634.1| ribosomal protein S13 [Arthrospira maxima CS-328]
 gi|209492460|gb|EDZ92801.1| ribosomal protein S13 [Arthrospira maxima CS-328]
          Length = 127

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLTDADVAALRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +YQVEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|260061920|ref|YP_003195000.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501]
 gi|88786053|gb|EAR17222.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501]
          Length = 124

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +++I  K  +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAKEILEKAKVDEDTKVSDWSDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GE-FTIEGELRSETQINIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|254412272|ref|ZP_05026047.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420]
 gi|196181238|gb|EDX76227.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420]
          Length = 127

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA V++PR KR+   L YI+GIG   S++I  K  + P+ RV  L +++V  +R  +
Sbjct: 1   MARIASVDLPRDKRIEIGLTYIYGIGLSRSKEILAKTGVNPDIRVKDLSDADVATLRSVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E DYQVEGDLRR  AMNIKRL+D+G YRG RHR+GLPVRGQ
Sbjct: 61  EGDYQVEGDLRRWEAMNIKRLVDIGTYRGRRHRQGLPVRGQ 101


>gi|71905984|ref|YP_283571.1| 30S ribosomal protein S13 [Dechloromonas aromatica RCB]
 gi|91207698|sp|Q47J80|RS13_DECAR RecName: Full=30S ribosomal protein S13
 gi|71845605|gb|AAZ45101.1| SSU ribosomal protein S13P [Dechloromonas aromatica RCB]
          Length = 120

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I GIG   +Q IC+   +    ++  L +S++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIFGIGRTRAQKICDAAGVGRNVKMKDLSDSDMDRLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRK 110


>gi|148244351|ref|YP_001219045.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA]
 gi|158706294|sp|A5CXI6|RS13_VESOH RecName: Full=30S ribosomal protein S13
 gi|146326178|dbj|BAF61321.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA]
          Length = 117

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   +++IC  L + P  +V  + E+++  IR  I
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAREICITLKLDPVTKVANITENQLELIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR +AM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRRQLAMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRK 110


>gi|87122793|ref|ZP_01078666.1| 30S ribosomal protein S13 [Marinomonas sp. MED121]
 gi|86161958|gb|EAQ63250.1| 30S ribosomal protein S13 [Marinomonas sp. MED121]
          Length = 118

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICASTGVAESAKIGSLSDEVLDQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++M+IKRLMD+GC+RG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRRELSMSIKRLMDMGCHRGIRHRRSLPVRGQRTKTNARTRK 110


>gi|294674747|ref|YP_003575363.1| 30S ribosomal protein S13 [Prevotella ruminicola 23]
 gi|294473837|gb|ADE83226.1| ribosomal protein S13 [Prevotella ruminicola 23]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V++  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|24380345|ref|NP_722300.1| 30S ribosomal protein S13 [Streptococcus mutans UA159]
 gi|290581266|ref|YP_003485658.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025]
 gi|315222795|ref|ZP_07864681.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211]
 gi|319940037|ref|ZP_08014391.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV]
 gi|32363320|sp|Q8DS35|RS13_STRMU RecName: Full=30S ribosomal protein S13
 gi|24378363|gb|AAN59606.1|AE015023_7 30S ribosomal protein S13 [Streptococcus mutans UA159]
 gi|254998165|dbj|BAH88766.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025]
 gi|315188098|gb|EFU21827.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211]
 gi|319810751|gb|EFW07078.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV]
          Length = 121

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|256847787|ref|ZP_05553232.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715476|gb|EEU30452.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN]
          Length = 121

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNSTAQKILADAGVSEDVRVRDLTPDQEEKIRSQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  E-NIKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|302553567|ref|ZP_07305909.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471185|gb|EFL34278.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM
           40736]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRK 111


>gi|291562747|emb|CBL41563.1| 30S ribosomal protein S13 [butyrate-producing bacterium SS3/4]
          Length = 122

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV  I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASADRILAAAGVNPDTRVKDLTDDEVKNIAAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR +A+NIKRL ++GCYRG+RHR+ LP RGQ+T TNART K
Sbjct: 61  AETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPCRGQKTKTNARTCK 111


>gi|261400074|ref|ZP_05986199.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970]
 gi|313667463|ref|YP_004047747.1| 30S ribosomal protein S13 [Neisseria lactamica ST-640]
 gi|269210299|gb|EEZ76754.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970]
 gi|309379137|emb|CBX22268.1| 30S ribosomal protein S13 [Neisseria lactamica Y92-1009]
 gi|313004925|emb|CBN86351.1| 30S ribosomal protein S13 [Neisseria lactamica 020-06]
          Length = 120

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  +  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGIQAIYGIGAARAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRK 110


>gi|297192678|ref|ZP_06910076.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721667|gb|EDY65575.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + Q EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLQTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|295838429|ref|ZP_06825362.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74]
 gi|302519634|ref|ZP_07271976.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78]
 gi|318058103|ref|ZP_07976826.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actG]
 gi|318076044|ref|ZP_07983376.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actF]
 gi|197695773|gb|EDY42706.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74]
 gi|302428529|gb|EFL00345.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL Y+ GIG   S+       + P  RV  L E ++++IR+ +
Sbjct: 1   MARLEGVDLPREKRVEVALTYVFGIGRTLSKQTLAATGVDPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + Q EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  DANIQTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRK 111


>gi|53715442|ref|YP_101434.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46]
 gi|60683414|ref|YP_213558.1| 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343]
 gi|253566694|ref|ZP_04844147.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5]
 gi|255011670|ref|ZP_05283796.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
 gi|265767572|ref|ZP_06095238.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16]
 gi|313149506|ref|ZP_07811699.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
 gi|81313534|sp|Q5L8D3|RS13_BACFN RecName: Full=30S ribosomal protein S13
 gi|81381130|sp|Q64NN2|RS13_BACFR RecName: Full=30S ribosomal protein S13
 gi|52218307|dbj|BAD50900.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46]
 gi|60494848|emb|CAH09655.1| putative 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343]
 gi|251944866|gb|EES85341.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5]
 gi|263252877|gb|EEZ24389.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16]
 gi|301164899|emb|CBW24460.1| putative 30S ribosomal protein S13 [Bacteroides fragilis 638R]
 gi|313138273|gb|EFR55633.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|325269511|ref|ZP_08136127.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608]
 gi|325856026|ref|ZP_08171915.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A]
 gi|327313214|ref|YP_004328651.1| 30S ribosomal protein S13 [Prevotella denticola F0289]
 gi|324988130|gb|EGC20097.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608]
 gi|325483698|gb|EGC86662.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A]
 gi|326945033|gb|AEA20918.1| 30S ribosomal protein S13 [Prevotella denticola F0289]
          Length = 146

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 24  RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREIIGA 83

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 84  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 132


>gi|261880858|ref|ZP_06007285.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361]
 gi|270332365|gb|EFA43151.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361]
          Length = 126

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V++  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWSDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V M+IKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQMSIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|328949255|ref|YP_004366592.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489]
 gi|328449579|gb|AEB15295.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489]
          Length = 122

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL Y++GIG  S+  IC    + P   ++ L E ++ ++R+ I
Sbjct: 1   MARIAGVDLPN-KHVNIALTYVYGIGRSSANKICEATNVDPHAHLNDLSEDDLTKLRKYI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++++ EG LR  + +NIKRLMD+G YRGLRHR+GLP RGQRT TN+RTRK
Sbjct: 60  DENFKTEGRLRSEIGLNIKRLMDIGSYRGLRHRKGLPCRGQRTRTNSRTRK 110


>gi|313677143|ref|YP_004055139.1| SSU ribosomal protein s13p [Marivirga tractuosa DSM 4126]
 gi|312943841|gb|ADR23031.1| SSU ribosomal protein S13P [Marivirga tractuosa DSM 4126]
          Length = 125

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IP  KR V +L YI G+G  SS  I     +  +++V    + E   IR  I
Sbjct: 1   MARVSGVDIPDNKRGVISLTYIFGLGKSSSAKILEMAGVDADKKVSDWTDDEANSIRTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++++ EG L+  V M+IKRL+D+GCYRGLRHR+GLP+RGQRT  N+RTRK
Sbjct: 61  SENFKTEGVLKSEVQMSIKRLLDIGCYRGLRHRKGLPLRGQRTKNNSRTRK 111


>gi|88704354|ref|ZP_01102068.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71]
 gi|88701405|gb|EAQ98510.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71]
          Length = 118

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G   ++ IC    +    RV  L E ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICEASGVEESARVGDLSEDQLDVLRNKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRK 110


>gi|91785442|ref|YP_560648.1| 30S ribosomal protein S13 [Burkholderia xenovorans LB400]
 gi|170695704|ref|ZP_02886846.1| ribosomal protein S13 [Burkholderia graminis C4D1M]
 gi|296163298|ref|ZP_06846059.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1]
 gi|307731232|ref|YP_003908456.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003]
 gi|123358403|sp|Q13TJ3|RS13_BURXL RecName: Full=30S ribosomal protein S13
 gi|91689396|gb|ABE32596.1| SSU ribosomal protein S13P [Burkholderia xenovorans LB400]
 gi|170139309|gb|EDT07495.1| ribosomal protein S13 [Burkholderia graminis C4D1M]
 gi|295886437|gb|EFG66294.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1]
 gi|307585767|gb|ADN59165.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003]
          Length = 121

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+GIG   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|160896492|ref|YP_001562074.1| 30S ribosomal protein S13 [Delftia acidovorans SPH-1]
 gi|226712728|sp|A9BRX2|RS13_DELAS RecName: Full=30S ribosomal protein S13
 gi|160362076|gb|ABX33689.1| ribosomal protein S13 [Delftia acidovorans SPH-1]
          Length = 121

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG  +++ IC    I   +++ +L + ++ +IR  +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIYGIGRTTARKICEAAGIAYSKKIKELTDGDLEKIRDQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  -TSLTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|117927540|ref|YP_872091.1| 30S ribosomal protein S13 [Acidothermus cellulolyticus 11B]
 gi|158706209|sp|A0LRP5|RS13_ACIC1 RecName: Full=30S ribosomal protein S13
 gi|117648003|gb|ABK52105.1| SSU ribosomal protein S13P [Acidothermus cellulolyticus 11B]
          Length = 126

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 85/111 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I P+ RV  L + +++++R+ I
Sbjct: 1   MARLVGVDLPRDKRLEVALTYIYGIGRTRALETLAATGISPDLRVRDLTDDDLLKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRTHTNARTRK
Sbjct: 61  EANYRVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTHTNARTRK 111


>gi|221126765|ref|XP_002165015.1| PREDICTED: similar to 30S ribosomal protein S13 [Hydra
           magnipapillata]
 gi|260222206|emb|CBA31537.1| 30S ribosomal protein S13 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 121

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   ++V  L +S++ +IR  I
Sbjct: 1   MARIAGINIPPHQHSEIGLTAIFGIGRTRARKICEACGIAYSKKVKDLTDSDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110


>gi|281422228|ref|ZP_06253227.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205]
 gi|281403733|gb|EFB34413.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205]
          Length = 126

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWSDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|270307865|ref|YP_003329923.1| ribosomal protein S13 [Dehalococcoides sp. VS]
 gi|270153757|gb|ACZ61595.1| ribosomal protein S13 [Dehalococcoides sp. VS]
          Length = 129

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLAQAGVDKAIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+  LPVRGQRT TNARTR+
Sbjct: 61  DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRR 111


>gi|221133737|ref|ZP_03560042.1| 30S ribosomal protein S13 [Glaciecola sp. HTCC2999]
          Length = 118

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I GIG   ++ IC    +    ++  L E+ + ++R  +
Sbjct: 1   MARIAGINIPEHKHTVIAIQAIFGIGATRAKSICASAGVAESTKIKDLDETTIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|172038950|ref|YP_001805451.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142]
 gi|254811144|sp|B1WQT3|RS13_CYAA5 RecName: Full=30S ribosomal protein S13
 gi|171700404|gb|ACB53385.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142]
          Length = 127

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   SQ+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILAETGVNPDTRVRDLSDEDVAKLRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|319900948|ref|YP_004160676.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108]
 gi|319415979|gb|ADV43090.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108]
          Length = 126

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|86141163|ref|ZP_01059709.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217]
 gi|85831722|gb|EAQ50177.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217]
          Length = 124

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q I  +  +    +V++  + ++ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAQKILAQADVDENLKVNEWDDDQIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  V+M+IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GS-YKIEGELRSEVSMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|77414587|ref|ZP_00790730.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515]
 gi|77159385|gb|EAO70553.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515]
          Length = 110

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|309812450|ref|ZP_07706205.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185]
 gi|308433755|gb|EFP57632.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185]
          Length = 124

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV   L YI G+G   +Q+      + P+ RV  L E E++++R  +
Sbjct: 1   MARLIGVDLPREKRVEVGLTYIFGVGRTRAQETLAATGVNPDTRVRDLTEEELVKLRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EGDLRR +A +I+R +++G Y GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EASFRLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVHGQRTKTNARTRK 111


>gi|301628939|ref|XP_002943606.1| PREDICTED: 30S ribosomal protein S13-like [Xenopus (Silurana)
           tropicalis]
          Length = 121

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIYGIGRTRARKICEACGIEYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AR-LTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|184200287|ref|YP_001854494.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201]
 gi|226712750|sp|B2GJ18|RS13_KOCRD RecName: Full=30S ribosomal protein S13
 gi|183580517|dbj|BAG28988.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201]
          Length = 122

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G   + +      I  + RV  L + +++++R  I
Sbjct: 1   MARLAGVDLPREKRLEVALTYIYGVGRTRALETLEATGISGDVRVKDLTDPQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|221064826|ref|ZP_03540931.1| ribosomal protein S13 [Comamonas testosteroni KF-1]
 gi|220709849|gb|EED65217.1| ribosomal protein S13 [Comamonas testosteroni KF-1]
          Length = 121

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG  +++ IC    I   ++V  L ++++ +IR  +
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  NP-MTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|86132567|ref|ZP_01051160.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134]
 gi|85816809|gb|EAQ37994.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134]
          Length = 124

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   +Q+I     +  +++V    + E+ +IR A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRAQEILATANVSEDKKVSDWDDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110


>gi|15828062|ref|NP_302325.1| 30S ribosomal protein S13 [Mycobacterium leprae TN]
 gi|221230539|ref|YP_002503955.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
 gi|7388130|sp|Q9X7A1|RS13_MYCLE RecName: Full=30S ribosomal protein S13
 gi|254811158|sp|B8ZSH9|RS13_MYCLB RecName: Full=30S ribosomal protein S13
 gi|4539115|emb|CAB39836.1| putative 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|13093615|emb|CAC30915.1| 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|219933646|emb|CAR72057.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
          Length = 124

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIYGIGRTRANEILEATGIERDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R M++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKMEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|149179435|ref|ZP_01857989.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797]
 gi|148841746|gb|EDL56155.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797]
          Length = 128

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K V  +L Y++GIG  ++ DIC+KL I P+ +   L + E+ +I   +
Sbjct: 1   MPRILGVDIPNEKPVYVSLTYLYGIGKVTALDICHKLNINPQLKAKDLTDDELSRIVNML 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEG LRR    +I RL D+  YRG+RHRRGLPVRGQ T TNARTRK  GK  VA 
Sbjct: 61  DTDYSVEGQLRRATTQDIARLRDIQSYRGIRHRRGLPVRGQNTQTNARTRKG-GKKTVAG 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|303256472|ref|ZP_07342486.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47]
 gi|331000666|ref|ZP_08324319.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT
           11859]
 gi|302859963|gb|EFL83040.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47]
 gi|329570878|gb|EGG52589.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT
           11859]
          Length = 121

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   +++I   + +   ++V  L ++E+ +IR AI
Sbjct: 1   MARIAGINIPPNQHAEIGLTAIYGIGRPRAREILEAVGVEKTKKVKDLTDAELERIRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR + ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK   K GVA 
Sbjct: 61  SK-LTVEGDLRREIQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPKKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|189465441|ref|ZP_03014226.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM
           17393]
 gi|224537840|ref|ZP_03678379.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|189437715|gb|EDV06700.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM
           17393]
 gi|224520526|gb|EEF89631.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 126

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEVALTYIYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|157149729|ref|YP_001451211.1| 30S ribosomal protein S13 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262283558|ref|ZP_06061323.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA]
 gi|189044302|sp|A8AZK1|RS13_STRGC RecName: Full=30S ribosomal protein S13
 gi|157074523|gb|ABV09206.1| ribosomal protein S13p/S18e [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262260615|gb|EEY79316.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA]
          Length = 121

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDVRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|325916508|ref|ZP_08178777.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937]
 gi|325537297|gb|EGD09024.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937]
          Length = 134

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 17  MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 77  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 126


>gi|309799082|ref|ZP_07693335.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302]
 gi|308117317|gb|EFO54740.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302]
          Length = 121

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGISEDVRVRDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|224023642|ref|ZP_03642008.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM
           18228]
 gi|224016864|gb|EEF74876.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM
           18228]
          Length = 126

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112


>gi|254516932|ref|ZP_05128990.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3]
 gi|219674437|gb|EED30805.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3]
          Length = 118

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G   ++ IC    +    RV  L E ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICAASGVEESARVGDLSEDQLDVLRNKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRK 110


>gi|325921502|ref|ZP_08183357.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865]
 gi|325548049|gb|EGD19048.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865]
          Length = 123

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 6   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 66  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 115


>gi|297621701|ref|YP_003709838.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
 gi|297377002|gb|ADI38832.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
          Length = 122

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 76/110 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G +IP  KR++ +L YI+GIG   +++I  KL + P  R   L E ++ +I   +
Sbjct: 1   MPRVIGTDIPDNKRLIISLTYIYGIGPFKAKEIIEKLQLDPNMRARGLTEDDIAKINTLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + DY VEGDLRR V  NIKRL+ + CYRG+RHR GLPVRGQRT +NARTR
Sbjct: 61  QNDYIVEGDLRRQVQNNIKRLISINCYRGIRHRSGLPVRGQRTQSNARTR 110


>gi|21241758|ref|NP_641340.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|66769621|ref|YP_244383.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78046576|ref|YP_362751.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84625023|ref|YP_452395.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879273|ref|YP_202200.6| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|166710853|ref|ZP_02242060.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188575511|ref|YP_001912440.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188992833|ref|YP_001904843.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. B100]
 gi|289665158|ref|ZP_06486739.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669365|ref|ZP_06490440.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. musacearum
           NCPPB4381]
 gi|294627859|ref|ZP_06706438.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664164|ref|ZP_06729550.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325925366|ref|ZP_08186768.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118]
 gi|32363342|sp|Q8NKX3|RS13_XANAC RecName: Full=30S ribosomal protein S13
 gi|81304424|sp|Q4URG0|RS13_XANC8 RecName: Full=30S ribosomal protein S13
 gi|91207633|sp|Q3BWW2|RS13_XANC5 RecName: Full=30S ribosomal protein S13
 gi|91207634|sp|Q5GWV6|RS13_XANOR RecName: Full=30S ribosomal protein S13
 gi|123521159|sp|Q2P006|RS13_XANOM RecName: Full=30S ribosomal protein S13
 gi|226712804|sp|B0RU61|RS13_XANCB RecName: Full=30S ribosomal protein S13
 gi|226712805|sp|B2SQT1|RS13_XANOP RecName: Full=30S ribosomal protein S13
 gi|18378766|gb|AAD00322.2| ribosomal protein S13 [Xanthomonas campestris pv. campestris]
 gi|21107130|gb|AAM35876.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|66574953|gb|AAY50363.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78035006|emb|CAJ22651.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84368963|dbj|BAE70121.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|167734593|emb|CAP52803.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris]
 gi|188519963|gb|ACD57908.1| ribosomal protein S13p/S18e [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|292597773|gb|EFF41931.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606067|gb|EFF49332.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544244|gb|EGD15625.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118]
          Length = 118

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|120437152|ref|YP_862838.1| 30S ribosomal protein S13 [Gramella forsetii KT0803]
 gi|158706234|sp|A0M576|RS13_GRAFK RecName: Full=30S ribosomal protein S13
 gi|117579302|emb|CAL67771.1| 30S ribosomal protein S13 [Gramella forsetii KT0803]
          Length = 124

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q+I  +  +   ++V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEILAQAKVDESKKVSDWDDDEIGKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + +EG+LR  V ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GQ-FTIEGELRTEVQISIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|218440645|ref|YP_002378974.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7424]
 gi|226712726|sp|B7KI09|RS13_CYAP7 RecName: Full=30S ribosomal protein S13
 gi|218173373|gb|ACK72106.1| ribosomal protein S13 [Cyanothece sp. PCC 7424]
          Length = 127

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   S++I     + P+ RV  L + + + +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSKEILANTGVNPDTRVKDLSDEDALALRSYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR   MNIKRL+D+G YRG RHR+GLPVRGQ
Sbjct: 61  EANYQIEGDLRRWETMNIKRLVDIGTYRGRRHRQGLPVRGQ 101


>gi|152998249|ref|YP_001343084.1| 30S ribosomal protein S13 [Marinomonas sp. MWYL1]
 gi|189044280|sp|A6W370|RS13_MARMS RecName: Full=30S ribosomal protein S13
 gi|150839173|gb|ABR73149.1| ribosomal protein S13 [Marinomonas sp. MWYL1]
          Length = 118

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICAATGVAETAKIGSLSDDVLDELRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-YTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRK 110


>gi|256420683|ref|YP_003121336.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588]
 gi|256035591|gb|ACU59135.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588]
          Length = 126

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI GIG  ++Q I  K  I   ++V    + E   IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQYILEKSGIDFNKKVKDWNDDEQAAIRNVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++VEG LR  V MNIKRL+D+ CYRGLRHR+GLP+RGQRT TN+RTRK
Sbjct: 61  NGEFKVEGQLRSEVQMNIKRLLDIACYRGLRHRKGLPLRGQRTRTNSRTRK 111


>gi|119511157|ref|ZP_01630274.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414]
 gi|119464145|gb|EAW45065.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414]
          Length = 126

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   S +I     + P+ RV  L ++EV  +R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYIYGIGLTRSLEILAATGVNPDTRVKDLSDAEVAALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  AM+IKRL+D+GCYRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLEAMSIKRLVDIGCYRGRRHRMGLPVRGQ 101


>gi|29348113|ref|NP_811616.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482]
 gi|153805980|ref|ZP_01958648.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185]
 gi|160883041|ref|ZP_02064044.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483]
 gi|237717423|ref|ZP_04547904.1| 30S ribosomal protein S13 [Bacteroides sp. D1]
 gi|237718719|ref|ZP_04549200.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4]
 gi|253569615|ref|ZP_04847025.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6]
 gi|255690027|ref|ZP_05413702.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565]
 gi|260175440|ref|ZP_05761852.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
 gi|262406188|ref|ZP_06082738.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22]
 gi|293372096|ref|ZP_06618487.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f]
 gi|294644081|ref|ZP_06721858.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a]
 gi|294806541|ref|ZP_06765380.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b]
 gi|298386203|ref|ZP_06995760.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14]
 gi|298483088|ref|ZP_07001269.1| 30S ribosomal protein S13 [Bacteroides sp. D22]
 gi|299144600|ref|ZP_07037668.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23]
 gi|315923669|ref|ZP_07919909.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
 gi|32363309|sp|Q8A499|RS13_BACTN RecName: Full=30S ribosomal protein S13
 gi|29340016|gb|AAO77810.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482]
 gi|149130657|gb|EDM21863.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185]
 gi|156111513|gb|EDO13258.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483]
 gi|229443406|gb|EEO49197.1| 30S ribosomal protein S13 [Bacteroides sp. D1]
 gi|229451851|gb|EEO57642.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4]
 gi|251841634|gb|EES69715.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6]
 gi|260624634|gb|EEX47505.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565]
 gi|262357063|gb|EEZ06153.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22]
 gi|292632888|gb|EFF51475.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f]
 gi|292640605|gb|EFF58846.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a]
 gi|294446236|gb|EFG14864.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085405|emb|CBK66928.1| SSU ribosomal protein S13P [Bacteroides xylanisolvens XB1A]
 gi|298261431|gb|EFI04298.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14]
 gi|298270832|gb|EFI12412.1| 30S ribosomal protein S13 [Bacteroides sp. D22]
 gi|298515091|gb|EFI38972.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23]
 gi|313697544|gb|EFS34379.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
          Length = 126

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|187925593|ref|YP_001897235.1| 30S ribosomal protein S13 [Burkholderia phytofirmans PsJN]
 gi|226712709|sp|B2T728|RS13_BURPP RecName: Full=30S ribosomal protein S13
 gi|187716787|gb|ACD18011.1| ribosomal protein S13 [Burkholderia phytofirmans PsJN]
          Length = 121

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+G+G   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|259500916|ref|ZP_05743818.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335]
 gi|302190631|ref|ZP_07266885.1| 30S ribosomal protein S13 [Lactobacillus iners AB-1]
 gi|309803620|ref|ZP_07697710.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d]
 gi|309804981|ref|ZP_07699039.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c]
 gi|309806699|ref|ZP_07700694.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b]
 gi|309808456|ref|ZP_07702355.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a]
 gi|309809065|ref|ZP_07702938.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871219|ref|ZP_07731317.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a]
 gi|312872776|ref|ZP_07732841.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874098|ref|ZP_07734133.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d]
 gi|312874881|ref|ZP_07734900.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b]
 gi|315654002|ref|ZP_07906918.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195]
 gi|325912347|ref|ZP_08174743.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D]
 gi|325913206|ref|ZP_08175575.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B]
 gi|329920624|ref|ZP_08277311.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G]
 gi|259167610|gb|EEW52105.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335]
 gi|308164218|gb|EFO66475.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d]
 gi|308165741|gb|EFO67966.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c]
 gi|308166879|gb|EFO69063.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b]
 gi|308168284|gb|EFO70403.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a]
 gi|308170510|gb|EFO72530.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089626|gb|EFQ48051.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b]
 gi|311090438|gb|EFQ48847.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d]
 gi|311091818|gb|EFQ50197.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093233|gb|EFQ51579.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a]
 gi|315488698|gb|EFU78344.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195]
 gi|325475818|gb|EGC78988.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D]
 gi|325477470|gb|EGC80613.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B]
 gi|328935882|gb|EGG32342.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G]
          Length = 116

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEPTAKVICEAAGVSEDVRTSDLTPEQQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ ++VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-FRVEGDLRREVNLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|284053324|ref|ZP_06383534.1| 30S ribosomal protein S13 [Arthrospira platensis str. Paraca]
 gi|291567806|dbj|BAI90078.1| 30S ribosomal protein S13 [Arthrospira platensis NIES-39]
          Length = 127

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLSDADVAALRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +YQVEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|319760351|ref|YP_004124289.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF]
 gi|318039065|gb|ADV33615.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF]
          Length = 119

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GVN+P  K  V AL  I+GIG   +++IC  + I    R++QL E  + ++R  I
Sbjct: 1   MVRIVGVNVPDRKHAVIALMSIYGIGKSLAKEICLNVGIDLHVRINQLSEENIDKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR + +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  SK-YVIEGDLRREINLNIKRLIDLGTYRGLRHRRSLPVRGQRTRTNARTRK 110


>gi|163783359|ref|ZP_02178352.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881467|gb|EDP74978.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 105

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 77/105 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG    ++IC    I   +RV +L   E+  +R+ I
Sbjct: 1   MARIAGVDLPDNKRLEIALTYIYGIGKTRVREICESTGIDCRKRVGELSPEELNTLRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           ++ Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T T
Sbjct: 61  DEHYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRT 105


>gi|160888375|ref|ZP_02069378.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492]
 gi|167764349|ref|ZP_02436474.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC
           43183]
 gi|218131303|ref|ZP_03460107.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697]
 gi|270294728|ref|ZP_06200929.1| 30S ribosomal protein S13 [Bacteroides sp. D20]
 gi|317476333|ref|ZP_07935582.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA]
 gi|317477728|ref|ZP_07936921.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36]
 gi|156862052|gb|EDO55483.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492]
 gi|167697754|gb|EDS14333.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC
           43183]
 gi|217986520|gb|EEC52856.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697]
 gi|270273975|gb|EFA19836.1| 30S ribosomal protein S13 [Bacteroides sp. D20]
 gi|316906073|gb|EFV27834.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36]
 gi|316907359|gb|EFV29064.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA]
          Length = 126

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|73748341|ref|YP_307580.1| 30S ribosomal protein S13 [Dehalococcoides sp. CBDB1]
 gi|147669121|ref|YP_001213939.1| 30S ribosomal protein S13 [Dehalococcoides sp. BAV1]
 gi|289432389|ref|YP_003462262.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT]
 gi|91207700|sp|Q3ZZP9|RS13_DEHSC RecName: Full=30S ribosomal protein S13
 gi|189040501|sp|A5FRW9|RS13_DEHSB RecName: Full=30S ribosomal protein S13
 gi|73660057|emb|CAI82664.1| ribosomal protein S13 [Dehalococcoides sp. CBDB1]
 gi|146270069|gb|ABQ17061.1| SSU ribosomal protein S13P [Dehalococcoides sp. BAV1]
 gi|288946109|gb|ADC73806.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT]
          Length = 129

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+  LPVRGQRT TNARTR+
Sbjct: 61  DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRR 111


>gi|170780764|ref|YP_001709096.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155332|emb|CAQ00435.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 124

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G  SS        I    RV  L + ++I +R  I
Sbjct: 1   MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKNIRVKDLSDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRK 111


>gi|15610596|ref|NP_217977.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Rv]
 gi|15843055|ref|NP_338092.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31794636|ref|NP_857129.1| 30S ribosomal protein S13 [Mycobacterium bovis AF2122/97]
 gi|121639380|ref|YP_979604.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663325|ref|YP_001284848.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148824670|ref|YP_001289424.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis F11]
 gi|167966773|ref|ZP_02549050.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|215405499|ref|ZP_03417680.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|215413374|ref|ZP_03422058.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|215428967|ref|ZP_03426886.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T92]
 gi|218755238|ref|ZP_03534034.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis GM 1503]
 gi|224991876|ref|YP_002646565.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800505|ref|YP_003033506.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           1435]
 gi|254234052|ref|ZP_04927377.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|254366061|ref|ZP_04982106.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552563|ref|ZP_05143010.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188515|ref|ZP_05765989.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CPHL_A]
 gi|260202643|ref|ZP_05770134.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|260206831|ref|ZP_05774322.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis K85]
 gi|289445060|ref|ZP_06434804.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289449164|ref|ZP_06438908.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289555731|ref|ZP_06444941.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605]
 gi|289576196|ref|ZP_06456423.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289747293|ref|ZP_06506671.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289752184|ref|ZP_06511562.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289763642|ref|ZP_06523020.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503]
 gi|294995766|ref|ZP_06801457.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 210]
 gi|297636119|ref|ZP_06953899.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN 4207]
 gi|297733119|ref|ZP_06962237.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN R506]
 gi|298526944|ref|ZP_07014353.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|306777808|ref|ZP_07416145.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|306782526|ref|ZP_07420863.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|306786345|ref|ZP_07424667.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|306790714|ref|ZP_07429036.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|306795243|ref|ZP_07433545.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|306799432|ref|ZP_07437734.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|306805279|ref|ZP_07441947.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|306809464|ref|ZP_07446132.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|306969572|ref|ZP_07482233.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|306973926|ref|ZP_07486587.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|307081635|ref|ZP_07490805.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|307086241|ref|ZP_07495354.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|313660450|ref|ZP_07817330.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN V2475]
 gi|6094153|sp|O06327|RS13_MYCTU RecName: Full=30S ribosomal protein S13
 gi|38605717|sp|P45813|RS13_MYCBO RecName: Full=30S ribosomal protein S13
 gi|158706248|sp|A1KPE6|RS13_MYCBP RecName: Full=30S ribosomal protein S13
 gi|158706252|sp|A5U8D6|RS13_MYCTA RecName: Full=30S ribosomal protein S13
 gi|254811157|sp|C1AHR8|RS13_MYCBT RecName: Full=30S ribosomal protein S13
 gi|2104383|emb|CAB08726.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium tuberculosis
           H37Rv]
 gi|13883399|gb|AAK47906.1| ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31620233|emb|CAD95676.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium bovis
           AF2122/97]
 gi|121495028|emb|CAL73514.1| Probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599581|gb|EAY58685.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|134151574|gb|EBA43619.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507477|gb|ABQ75286.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148723197|gb|ABR07822.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis F11]
 gi|224774991|dbj|BAH27797.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322008|gb|ACT26611.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           1435]
 gi|289417979|gb|EFD15219.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289422122|gb|EFD19323.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289440363|gb|EFD22856.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605]
 gi|289540627|gb|EFD45205.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289687821|gb|EFD55309.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289692771|gb|EFD60200.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289711148|gb|EFD75164.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503]
 gi|298496738|gb|EFI32032.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|308213892|gb|EFO73291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|308324843|gb|EFP13694.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|308329097|gb|EFP17948.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|308332905|gb|EFP21756.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|308336565|gb|EFP25416.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|308340440|gb|EFP29291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|308344304|gb|EFP33155.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|308348195|gb|EFP37046.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|308352919|gb|EFP41770.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|308356762|gb|EFP45613.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|308360707|gb|EFP49558.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|308364322|gb|EFP53173.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|323717944|gb|EGB27133.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905306|gb|EGE52239.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis W-148]
 gi|328460236|gb|AEB05659.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           4207]
          Length = 124

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111


>gi|148273770|ref|YP_001223331.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831700|emb|CAN02669.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 124

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G  SS        I  + RV  L + ++I +R  I
Sbjct: 1   MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKDIRVKDLSDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRK 111


>gi|269955460|ref|YP_003325249.1| 30S ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304141|gb|ACZ29691.1| ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894]
          Length = 124

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+G+G   +        I P+ RV  L +++++ +R  +
Sbjct: 1   MARLIGVDLPREKRVEIALTYIYGVGRTRASQTLEATGISPDVRVKDLDDAQLVALRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  +++EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGSFKLEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
 gi|254811172|sp|B9K8B1|RS13_THENN RecName: Full=30S ribosomal protein S13
 gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
          Length = 125

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+V  AL YI+GIG   S +I     + P++RV +L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGVDPDKRVGELTDEEISKITKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  ++VEG+LR  V  NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK
Sbjct: 61  QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRK 111


>gi|58427778|gb|AAW76815.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 134

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 17  MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 77  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 126


>gi|16329919|ref|NP_440647.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803]
 gi|2500458|sp|P73299|RS13_SYNY3 RecName: Full=30S ribosomal protein S13
 gi|1652405|dbj|BAA17327.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803]
          Length = 127

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 75/101 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   S +I +   + P+ RV  L + + +++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSHEILDATGVSPDVRVKDLSDEDALKLRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           +++Y++EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  DENYEIEGDLRRWEAMNIKRLGDIGTYRGRRHRQGLPVRGQ 101


>gi|161523452|ref|YP_001578464.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|167587749|ref|ZP_02380137.1| ribosomal protein S13 [Burkholderia ubonensis Bu]
 gi|189351775|ref|YP_001947403.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|206558664|ref|YP_002229424.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315]
 gi|221201588|ref|ZP_03574626.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M]
 gi|221207337|ref|ZP_03580347.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2]
 gi|221213475|ref|ZP_03586450.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1]
 gi|254253497|ref|ZP_04946815.1| Ribosomal protein S13 [Burkholderia dolosa AUO158]
 gi|226712706|sp|B4E5E3|RS13_BURCJ RecName: Full=30S ribosomal protein S13
 gi|226712707|sp|A9ADL6|RS13_BURM1 RecName: Full=30S ribosomal protein S13
 gi|124896106|gb|EAY69986.1| Ribosomal protein S13 [Burkholderia dolosa AUO158]
 gi|160340881|gb|ABX13967.1| ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|189335797|dbj|BAG44867.1| small subunit ribosomal protein S13 [Burkholderia multivorans ATCC
           17616]
 gi|198034701|emb|CAR50568.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315]
 gi|221166927|gb|EED99398.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1]
 gi|221172925|gb|EEE05362.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2]
 gi|221178404|gb|EEE10813.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M]
 gi|325529701|gb|EGD06564.1| 30S ribosomal protein S13 [Burkholderia sp. TJI49]
          Length = 121

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   S+ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|253581363|ref|ZP_04858589.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725]
 gi|251836727|gb|EES65261.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725]
          Length = 118

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR  I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E   +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|113476557|ref|YP_722618.1| 30S ribosomal protein S13 [Trichodesmium erythraeum IMS101]
 gi|123056506|sp|Q110C9|RS13_TRIEI RecName: Full=30S ribosomal protein S13
 gi|110167605|gb|ABG52145.1| SSU ribosomal protein S13P [Trichodesmium erythraeum IMS101]
          Length = 127

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG   SQ+I  +  + P+ RV  L +++V  IR  +
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGLSRSQEILAETDVNPDTRVKDLSDADVAAIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +Y+VEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QNNYEVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|257470857|ref|ZP_05634947.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185]
 gi|317065060|ref|ZP_07929545.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185]
 gi|313690736|gb|EFS27571.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185]
          Length = 118

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR AI
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIR-AI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 60  VETVKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|260909774|ref|ZP_05916468.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|288929316|ref|ZP_06423161.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|260636199|gb|EEX54195.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|288329418|gb|EFC68004.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 126

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|67923560|ref|ZP_00517033.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501]
 gi|67854586|gb|EAM49872.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501]
          Length = 127

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 75/101 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   +Q+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRAQEILAETGVNPDTRVRDLSDEDVAKLRGCI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E++YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  EENYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|189460707|ref|ZP_03009492.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136]
 gi|198273980|ref|ZP_03206512.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135]
 gi|189432666|gb|EDV01651.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136]
 gi|198273058|gb|EDY97327.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135]
          Length = 126

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112


>gi|110639512|ref|YP_679721.1| 30S ribosomal protein S13 [Cytophaga hutchinsonii ATCC 33406]
 gi|122966555|sp|Q11QD5|RS13_CYTH3 RecName: Full=30S ribosomal protein S13
 gi|110282193|gb|ABG60379.1| SSU ribosomal protein S13P [Cytophaga hutchinsonii ATCC 33406]
          Length = 125

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IP  KR   +L YI+GIG  S+Q I  K  +  +++V +  + E   +R  I
Sbjct: 1   MARISGVDIPDNKRGEVSLTYIYGIGRNSAQSILTKAGVNWDKKVSEWNDDEANAVRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +++ EG L+  V ++IKRLMD+GCYRGLRHR+GLPVRGQRT  N RTRK
Sbjct: 61  ASEHKTEGALKSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQRTKNNCRTRK 111


>gi|78186092|ref|YP_374135.1| 30S ribosomal protein S13 [Chlorobium luteolum DSM 273]
 gi|91207712|sp|Q3B6D9|RS13_PELLD RecName: Full=30S ribosomal protein S13
 gi|78165994|gb|ABB23092.1| SSU ribosomal protein S13P [Chlorobium luteolum DSM 273]
          Length = 125

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  +++ I  +  I P+R++  L ++E   IR+ + +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGNTTAKTILKRAGIAPDRKISDLNDAEAHAIRELVAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEG  R    + IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK
Sbjct: 62  EYKVEGQARGEQQLAIKRLMDIGCYRGLRHRRSLPVRGQNTQTNARTRK 110


>gi|258648135|ref|ZP_05735604.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259]
 gi|260852016|gb|EEX71885.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259]
          Length = 126

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  +    +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRGIKVSDWTDDQAGKIREIISN 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRGEIQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112


>gi|285017341|ref|YP_003375052.1| 30s ribosomal protein s13 [Xanthomonas albilineans GPE PC73]
 gi|283472559|emb|CBA15064.1| probable 30s ribosomal protein s13 [Xanthomonas albilineans]
          Length = 118

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEAAGVTSTTKIRDLSEPEIERLRLEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|315145360|gb|EFT89376.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2141]
          Length = 121

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG +IPR KRVV +L YI+GIG  +++ +   + +  + RV  L   +   IR  I
Sbjct: 1   MARIAGGDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRK 110


>gi|150003365|ref|YP_001298109.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482]
 gi|254881346|ref|ZP_05254056.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA]
 gi|294777843|ref|ZP_06743287.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510]
 gi|319640347|ref|ZP_07995072.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A]
 gi|158706336|sp|A6KYH3|RS13_BACV8 RecName: Full=30S ribosomal protein S13
 gi|149931789|gb|ABR38487.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482]
 gi|254834139|gb|EET14448.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA]
 gi|294448297|gb|EFG16853.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510]
 gi|317388122|gb|EFV68976.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A]
          Length = 126

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|149279640|ref|ZP_01885769.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
 gi|149229676|gb|EDM35066.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
          Length = 125

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KR    L YI GIG  ++Q I  +  I   ++V    + E+  IR  I
Sbjct: 1   MARISGIDLPRNKRGEIGLTYIFGIGRSTAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT  N+RTRK
Sbjct: 61  NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111


>gi|57234754|ref|YP_181243.1| 30S ribosomal protein S13 [Dehalococcoides ethenogenes 195]
 gi|91207699|sp|Q3Z956|RS13_DEHE1 RecName: Full=30S ribosomal protein S13
 gi|57225202|gb|AAW40259.1| ribosomal protein S13 [Dehalococcoides ethenogenes 195]
          Length = 129

 Score =  119 bits (299), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKAIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++Y+VEGDLR+ +A+NIKRL+D+GCYRG RH+  LPVRGQRT TNARTR+
Sbjct: 61  DKEYRVEGDLRKEIALNIKRLIDIGCYRGNRHKHNLPVRGQRTKTNARTRR 111


>gi|296875381|ref|ZP_06899455.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912]
 gi|312867026|ref|ZP_07727237.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405]
 gi|319945812|ref|ZP_08020062.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641]
 gi|322390683|ref|ZP_08064197.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903]
 gi|296433574|gb|EFH19347.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912]
 gi|311097508|gb|EFQ55741.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405]
 gi|319747877|gb|EFW00121.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641]
 gi|321142656|gb|EFX38120.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903]
          Length = 121

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGVSEDIRVRDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|303237462|ref|ZP_07324027.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN]
 gi|302482282|gb|EFL45312.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQEKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEG+LR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGELRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|118411078|ref|YP_874473.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum]
 gi|125987678|sp|A0T0J8|RR13_PHATC RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|116739825|gb|ABK20696.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum]
          Length = 123

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YIHGIG  S++ I     I PE R   L   E + +RQ +
Sbjct: 1   MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+ D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|254383147|ref|ZP_04998501.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1]
 gi|194342046|gb|EDX23012.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 81/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ G+G   S++I     + P+ RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGVGRTRSKEILAATGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREIQADIRRKVEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|239618240|ref|YP_002941562.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1]
 gi|259494683|sp|C5CGH7|RS13_KOSOT RecName: Full=30S ribosomal protein S13
 gi|239507071|gb|ACR80558.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1]
          Length = 121

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL YI+GIG   +++I     I  ++RV  L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKTFVALTYIYGIGPARAKEILKNTNIDGDKRVKDLTDEEISRISKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y+VEG+LR+ V  NIKRL+++GCYRG+RH+ GLPVRGQ+TH+NARTRK
Sbjct: 61  TDHYKVEGELRQEVERNIKRLIEIGCYRGIRHKIGLPVRGQKTHSNARTRK 111


>gi|194335469|ref|YP_002017263.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226712772|sp|B4SBX1|RS13_PELPB RecName: Full=30S ribosomal protein S13
 gi|194307946|gb|ACF42646.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 125

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S++ I  +  I P R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRASAESILQRAGIAPNRKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  QYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110


>gi|190572965|ref|YP_001970810.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a]
 gi|254521260|ref|ZP_05133315.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14]
 gi|226712790|sp|B2FQK5|RS13_STRMK RecName: Full=30S ribosomal protein S13
 gi|190010887|emb|CAQ44496.1| putative 30S ribosomal protein S13 [Stenotrophomonas maltophilia
           K279a]
 gi|219718851|gb|EED37376.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14]
          Length = 118

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|194334837|ref|YP_002016697.1| 30S ribosomal protein S13 [Prosthecochloris aestuarii DSM 271]
 gi|226712776|sp|B4S5A4|RS13_PROA2 RecName: Full=30S ribosomal protein S13
 gi|194312655|gb|ACF47050.1| ribosomal protein S13 [Prosthecochloris aestuarii DSM 271]
          Length = 125

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 78/109 (71%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I P +++ ++ + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTSARNILERAGIDPAKKIAEMSDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  EYKVEGQARGLQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRK 110


>gi|299830397|ref|YP_003734612.1| ribosomal protein S13 [Kryptoperidinium foliaceum]
 gi|297385099|gb|ADI40397.1| ribosomal protein S13 [Kryptoperidinium foliaceum]
          Length = 123

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++  AL YIHGIG  +++ I     I  E RV+ L   + + +RQ I
Sbjct: 1   MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKQIIETADIDSEVRVYDLTTEQTVALRQTI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+ D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  EESDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|319787904|ref|YP_004147379.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466416|gb|ADV28148.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1]
          Length = 118

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPTHKHVWVGLQSIYGIGRTRSKKVCEAANVATTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YIVEGDLRREVGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|291280124|ref|YP_003496959.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1]
 gi|290754826|dbj|BAI81203.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1]
          Length = 122

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V   L YI GIG  +++ I  +  I   +R+ +L E E+  IR+ I
Sbjct: 1   MARIAGVDVPNNKKVEIGLTYIFGIGRSTAKKIVEETGIDSNKRIGELSEQEISSIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119
           + + +VEG+LR+ + +NIKRLM++ CYRG RH+  +P RGQ+T +NARTR+   GK G+ 
Sbjct: 61  DSNLKVEGELRKEIGLNIKRLMEINCYRGYRHKNNMPCRGQKTRSNARTRRGLAGKRGIK 120

Query: 120 RK 121
           RK
Sbjct: 121 RK 122


>gi|183601968|ref|ZP_02963337.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190457|ref|YP_002967851.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195863|ref|YP_002969418.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218853|gb|EDT89495.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248849|gb|ACS45789.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250417|gb|ACS47356.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793444|gb|ADG32979.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 125

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R + +  Y+G+RHR+GLPVRGQRT TNARTRK
Sbjct: 61  ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRK 111


>gi|89902967|ref|YP_525438.1| 30S ribosomal protein S13 [Rhodoferax ferrireducens T118]
 gi|122478014|sp|Q21QP6|RS13_RHOFD RecName: Full=30S ribosomal protein S13
 gi|89347704|gb|ABD71907.1| SSU ribosomal protein S13P [Rhodoferax ferrireducens T118]
          Length = 121

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I G+G   ++ IC+   I   ++V  L + E+ +IR  +
Sbjct: 1   MARIAGINIPPQQHSEIGLTAIFGVGRNRARKICDACGIAYSKKVKDLTDLELEKIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110


>gi|78064947|ref|YP_367716.1| 30S ribosomal protein S13 [Burkholderia sp. 383]
 gi|107024280|ref|YP_622607.1| 30S ribosomal protein S13 [Burkholderia cenocepacia AU 1054]
 gi|116688395|ref|YP_834018.1| 30S ribosomal protein S13 [Burkholderia cenocepacia HI2424]
 gi|170731705|ref|YP_001763652.1| 30S ribosomal protein S13 [Burkholderia cenocepacia MC0-3]
 gi|254246580|ref|ZP_04939901.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184]
 gi|91207692|sp|Q39KE4|RS13_BURS3 RecName: Full=30S ribosomal protein S13
 gi|123371102|sp|Q1BRX1|RS13_BURCA RecName: Full=30S ribosomal protein S13
 gi|158706217|sp|A0K3P8|RS13_BURCH RecName: Full=30S ribosomal protein S13
 gi|226712705|sp|B1JU45|RS13_BURCC RecName: Full=30S ribosomal protein S13
 gi|77965692|gb|ABB07072.1| SSU ribosomal protein S13P [Burkholderia sp. 383]
 gi|105894469|gb|ABF77634.1| SSU ribosomal protein S13P [Burkholderia cenocepacia AU 1054]
 gi|116646484|gb|ABK07125.1| SSU ribosomal protein S13P [Burkholderia cenocepacia HI2424]
 gi|124871356|gb|EAY63072.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184]
 gi|169814947|gb|ACA89530.1| ribosomal protein S13 [Burkholderia cenocepacia MC0-3]
          Length = 121

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   S+ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|325280944|ref|YP_004253486.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712]
 gi|324312753|gb|ADY33306.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712]
          Length = 125

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR   AL YI+GIG  S++ I ++  I  + +V    + ++  +R+ I
Sbjct: 1   MARIVGVDLPSNKRGEIALTYIYGIGRSSARAILSEAGIDYDLKVKDWNDDQLGAVRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEG+LR +V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 61  GTEYKVEGELRSSVQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 111


>gi|126662241|ref|ZP_01733240.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38]
 gi|126625620|gb|EAZ96309.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38]
          Length = 124

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR + AL YI GIG   ++DI  K  +  +++V    + E+  IR A+
Sbjct: 1   MARIAGVDIPKQKRGIIALTYIFGIGKSRAKDILAKAQVSEDKKVQDWNDDEIGAIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              +++EG+LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SY-FKIEGELRSEIQLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|239996315|ref|ZP_04716839.1| 30S ribosomal protein S13 [Alteromonas macleodii ATCC 27126]
 gi|332142184|ref|YP_004427922.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226712686|sp|B4RT50|RS13_ALTMD RecName: Full=30S ribosomal protein S13
 gi|327552206|gb|AEA98924.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 118

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I+G+G   ++ IC    +    ++ +L E+ + ++R  +
Sbjct: 1   MARIAGINIPEHKHAVIAIQAIYGVGPTRAKSICAGAGVAENTKIKELDEATIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRK 110


>gi|118473987|ref|YP_885903.1| 30S ribosomal protein S13 [Mycobacterium smegmatis str. MC2 155]
 gi|158706249|sp|A0QSL5|RS13_MYCS2 RecName: Full=30S ribosomal protein S13
 gi|118175274|gb|ABK76170.1| ribosomal protein S13p/S18e [Mycobacterium smegmatis str. MC2 155]
          Length = 124

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S +I     I    R   L + +V  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSNEILAATGIDKNMRTKDLTDDQVTVLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|284992849|ref|YP_003411403.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160]
 gi|284066094|gb|ADB77032.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 83/111 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +++      + P+ RV  L + +++++R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIYGIGKTHAKETLAATGVSPDLRVRDLGDEDLLRLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K
Sbjct: 61  DEHFRVEGDLRREVAADIRRKVEIGCYQGLRHRRGLPVHGQRTRTNARSSK 111


>gi|219682880|ref|YP_002469263.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620530|gb|ACL28687.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|289178181|gb|ADC85427.1| SSU ribosomal protein S13P [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 136

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 12  MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R + +  Y+G+RHR+GLPVRGQRT TNARTRK
Sbjct: 72  ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRK 122


>gi|329962290|ref|ZP_08300296.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057]
 gi|328530398|gb|EGF57275.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I  K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILEKAGVDKDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|331699148|ref|YP_004335387.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
 gi|326953837|gb|AEA27534.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S +I N   I  + R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILNATGISKDLRSKDLSDEDLTALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNAR RK
Sbjct: 61  EANFRVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARGRK 111


>gi|255536131|ref|YP_003096502.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium
           3519-10]
 gi|255342327|gb|ACU08440.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium
           3519-10]
          Length = 125

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR V  L YI+GIG  +S +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARISGIDLPKNKRGVIGLTYIYGIGRSTSSEILKAAGISEDKKVNEWNDDELALIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++ +VEG+LR    +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  TENIKVEGELRSETQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 111


>gi|77361713|ref|YP_341288.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis TAC125]
 gi|119472061|ref|ZP_01614319.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7]
 gi|91207718|sp|Q3IJK6|RS13_PSEHT RecName: Full=30S ribosomal protein S13
 gi|76876624|emb|CAI87846.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119445196|gb|EAW26488.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7]
          Length = 118

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILAATGIAETTKIGELSDETLDVLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|325299108|ref|YP_004259025.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170]
 gi|324318661|gb|ADY36552.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170]
          Length = 126

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112


>gi|167564393|ref|ZP_02357309.1| 30S ribosomal protein S13 [Burkholderia oklahomensis EO147]
 gi|167571540|ref|ZP_02364414.1| 30S ribosomal protein S13 [Burkholderia oklahomensis C6786]
          Length = 121

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICAASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO]
 gi|166991604|sp|A8F4T6|RS13_THELT RecName: Full=30S ribosomal protein S13
 gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO]
          Length = 128

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL Y++G+G   + +I     I P++RV  L + EV +I + I
Sbjct: 1   MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEG+LR  +  NIKRL+D+GCYRG RH+ GLPVRGQRT +NARTRK
Sbjct: 61  QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRK 111


>gi|194364555|ref|YP_002027165.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia R551-3]
 gi|226712789|sp|B4SLH2|RS13_STRM5 RecName: Full=30S ribosomal protein S13
 gi|194347359|gb|ACF50482.1| ribosomal protein S13 [Stenotrophomonas maltophilia R551-3]
          Length = 118

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|294155441|ref|YP_003559825.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145]
 gi|291600534|gb|ADE20030.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145]
          Length = 122

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRVV +L YI+GIG   ++ IC +  I  + RV  L E E+ +IR+ +
Sbjct: 1   MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKINEDSRVKSLSEEELSRIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + +  EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  AKKFTTEGDLRREVNLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRK 110


>gi|300728419|ref|ZP_07061781.1| ribosomal protein S13p/S18e [Prevotella bryantii B14]
 gi|299774338|gb|EFI70968.1| ribosomal protein S13p/S18e [Prevotella bryantii B14]
          Length = 126

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI GIG  SS  I ++  +  + +V +  + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDQAGVNRDLKVSEWTDEQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++VEGDLR  ++MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  GFKVEGDLRSEISMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRK 112


>gi|315127934|ref|YP_004069937.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913]
 gi|315016448|gb|ADT69786.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913]
          Length = 118

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R+A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDETLDVLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|124003685|ref|ZP_01688533.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134]
 gi|123990740|gb|EAY30207.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134]
          Length = 125

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR   +L YI+GIG  +++ I  +  I   ++V    + E  +IR  I
Sbjct: 1   MARLAGVDIPDKKRGEVSLTYIYGIGLSTARTILERAGIDRNKKVIDWTDEESNEIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEG L+  V ++IKRLMD+GCYRG+RHR+GLP+RGQ+T  N+RTRK
Sbjct: 61  SSEYKVEGALKSEVQLSIKRLMDIGCYRGIRHRKGLPLRGQKTKNNSRTRK 111


>gi|311748490|ref|ZP_07722275.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
 gi|126577007|gb|EAZ81255.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
          Length = 125

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR    L YI GIG  S++ I +K  I  +++  +  + E   IR  I
Sbjct: 1   MARIAGVDIPDNKRGEIGLTYIFGIGRSSAKAILSKAGISFDKKAGEWDDDESTAIRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++++ EG L+  + +NIKRLMD+GCYRGLRHR+GLPVRGQ T  NARTRK
Sbjct: 61  AEEFRTEGVLKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQHTKNNARTRK 111


>gi|298345437|ref|YP_003718124.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304390993|ref|ZP_07372945.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315655843|ref|ZP_07908741.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315656231|ref|ZP_07909122.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298235498|gb|ADI66630.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304325876|gb|EFL93122.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315489907|gb|EFU79534.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315493233|gb|EFU82833.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 124

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      + P+ RV  L E E+I +R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIYGIGRTRATETLAATGVSPDTRVKDLTEDELIALRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNAR+RK
Sbjct: 61  QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARSRK 111


>gi|125717010|ref|YP_001034143.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK36]
 gi|323350963|ref|ZP_08086621.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66]
 gi|158706286|sp|A3CK88|RS13_STRSV RecName: Full=30S ribosomal protein S13
 gi|125496927|gb|ABN43593.1| 30S ribosomal protein S13, putative [Streptococcus sanguinis SK36]
 gi|322122945|gb|EFX94651.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66]
 gi|324989979|gb|EGC21920.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK353]
 gi|324991838|gb|EGC23763.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK405]
 gi|324996272|gb|EGC28180.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK678]
 gi|325686428|gb|EGD28458.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK72]
 gi|325689208|gb|EGD31214.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK115]
 gi|325695787|gb|EGD37684.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK150]
 gi|325697999|gb|EGD39882.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK160]
 gi|327458454|gb|EGF04810.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1]
 gi|327463699|gb|EGF10015.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1057]
 gi|327467358|gb|EGF12858.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK330]
 gi|327471719|gb|EGF17160.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK408]
 gi|327490440|gb|EGF22222.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1058]
 gi|328945194|gb|EGG39348.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1087]
          Length = 121

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTIEQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|294790436|ref|ZP_06755594.1| 30S ribosomal protein S13 [Scardovia inopinata F0304]
 gi|294458333|gb|EFG26686.1| 30S ribosomal protein S13 [Scardovia inopinata F0304]
          Length = 123

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 1   MARLAGVDIPNEKRIEVALTYIFGVGRTRAKETLEATGISPDIRVKDLTDEQLIQLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK
Sbjct: 61  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 111


>gi|163752894|ref|ZP_02160018.1| 30S ribosomal protein S13 [Kordia algicida OT-1]
 gi|161326626|gb|EDP97951.1| 30S ribosomal protein S13 [Kordia algicida OT-1]
          Length = 124

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   ++++     +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKHKRGVIALTYIFGVGRSRAKEVLATAKVSEDTKVSDWTDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y +EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GT-YTIEGELRTEVQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|332170582|gb|AEE19837.1| 30S ribosomal protein S13 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 124

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   +++I     +  +++V    + E+ +IR A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRAEEILAAANVSEDKKVSDWDDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110


>gi|186684488|ref|YP_001867684.1| 30S ribosomal protein S13 [Nostoc punctiforme PCC 73102]
 gi|226712769|sp|B2ITN3|RS13_NOSP7 RecName: Full=30S ribosomal protein S13
 gi|186466940|gb|ACC82741.1| ribosomal protein S13 [Nostoc punctiforme PCC 73102]
          Length = 126

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 73/101 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   +Q+I     + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRAQEIIAATGVNPDTRVKDLSDADVTALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQVEGDLRR  ++NIKRL+D+G YRG RHR GLPVRGQ
Sbjct: 61  ESNYQVEGDLRRLESLNIKRLVDIGTYRGRRHRMGLPVRGQ 101


>gi|293364084|ref|ZP_06610820.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2]
 gi|292552574|gb|EFF41348.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2]
          Length = 122

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRVV +L YI+GIG   ++ IC +  I    RV  L E ++ +IR+  
Sbjct: 1   MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKIDENARVKSLSEEQLSKIREVA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q +  EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  KQ-FTTEGDLRREVTLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRK 110


>gi|302536276|ref|ZP_07288618.1| 30S ribosomal protein S13 [Streptomyces sp. C]
 gi|302445171|gb|EFL16987.1| 30S ribosomal protein S13 [Streptomyces sp. C]
          Length = 126

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + + EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRK 111


>gi|212695282|ref|ZP_03303410.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855]
 gi|237711698|ref|ZP_04542179.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA]
 gi|237725861|ref|ZP_04556342.1| 30S ribosomal protein S13 [Bacteroides sp. D4]
 gi|265753117|ref|ZP_06088686.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA]
 gi|212662192|gb|EEB22766.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855]
 gi|229435669|gb|EEO45746.1| 30S ribosomal protein S13 [Bacteroides dorei 5_1_36/D4]
 gi|229454393|gb|EEO60114.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA]
 gi|263236303|gb|EEZ21798.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA]
          Length = 126

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAARIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRK 112


>gi|296454846|ref|YP_003661990.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184278|gb|ADH01160.1| ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301]
          Length = 125

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRTKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|224827039|ref|ZP_03700136.1| ribosomal protein S13 [Lutiella nitroferrum 2002]
 gi|224600705|gb|EEG06891.1| ribosomal protein S13 [Lutiella nitroferrum 2002]
          Length = 120

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP     V  L  I+GIG   +Q IC    +    +V  L ++E+ ++R+ +
Sbjct: 1   MARIAGVNIPNHAHAVIGLQAIYGIGQTRAQQICAAAGVVTSTKVKDLTDAEMDKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + M+IKRLMD+G YRG+RHRRGLP RGQRT TNARTRK
Sbjct: 61  AK-FTVEGDLRREITMSIKRLMDMGSYRGMRHRRGLPCRGQRTRTNARTRK 110


>gi|324999249|ref|ZP_08120361.1| 30S ribosomal protein S13 [Pseudonocardia sp. P1]
          Length = 126

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI G+G   S++I    AI  + R   L + +V ++R  I
Sbjct: 1   MARVAGVDLPREKRMEIALTYIFGVGRARSKEILEATAISADLRSKDLTDEDVTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+  QVEGDLRR +  +I+R +++G Y+G+RHRRGLPVRGQRT TNAR RK
Sbjct: 61  EEHLQVEGDLRREIQADIRRKIEIGSYQGIRHRRGLPVRGQRTKTNARGRK 111


>gi|312889343|ref|ZP_07748897.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603]
 gi|311298220|gb|EFQ75335.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603]
          Length = 125

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI GIG  ++QDI  +  I    +V    + ++  IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQDILTEAGIDFNTKVQDWTDEQLTSIRGII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEG LR  V +NIKRLMD+GCYRG RHR+GLP+RGQRT  N+RTRK
Sbjct: 61  NERIKVEGALRSEVQLNIKRLMDIGCYRGTRHRKGLPLRGQRTKNNSRTRK 111


>gi|255530538|ref|YP_003090910.1| 30S ribosomal protein S13 [Pedobacter heparinus DSM 2366]
 gi|255343522|gb|ACU02848.1| ribosomal protein S13 [Pedobacter heparinus DSM 2366]
          Length = 125

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KR    L YI G+G  ++Q I  +  I   ++V    + E+  IR  I
Sbjct: 1   MARISGIDLPRNKRGEIGLTYIFGVGRATAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT  N+RTRK
Sbjct: 61  NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRK 111


>gi|225011669|ref|ZP_03702107.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A]
 gi|225004172|gb|EEG42144.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A]
          Length = 124

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IP+ KR V AL YI GIG   +Q I     +   ++V +  + E  +IR+ +
Sbjct: 1   MARISGVDIPKQKRGVIALTYIFGIGKSRAQSILETAKVDENKKVSEWSDDETGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              +++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  -GSFKIEGELRSEVQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|240167780|ref|ZP_04746439.1| 30S ribosomal protein S13 [Mycobacterium kansasii ATCC 12478]
          Length = 124

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIYGIGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + ++EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|311744781|ref|ZP_07718577.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272]
 gi|311311898|gb|EFQ81819.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272]
          Length = 122

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL Y+ GIG   + +      I P  RVH L +S+++ +R  I
Sbjct: 1   MARLVGVDLPREKRIEIALTYVFGIGRTRATETLAATGIDPHTRVHALDDSQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  YQVEGDLRR V  +I+R M++G Y+G RHR  LPVRGQRT TNARTRK
Sbjct: 61  EAHYQVEGDLRREVTADIRRKMEIGSYQGRRHRAHLPVRGQRTKTNARTRK 111


>gi|261367777|ref|ZP_05980660.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176]
 gi|282570575|gb|EFB76110.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176]
          Length = 123

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L Y++GIG  ++ +I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRIQVGLTYVYGIGQSTADEILAGTGINPDTRVKDLTSDEEAKIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++   VEGDLRR VA++IKRL ++ CYRG+RHR+GLP RGQRT TNART K
Sbjct: 61  DKNNIMVEGDLRRNVALDIKRLTEIQCYRGVRHRKGLPCRGQRTKTNARTCK 112


>gi|71894586|ref|YP_278694.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53]
 gi|91207707|sp|Q4A5I8|RS13_MYCS5 RecName: Full=30S ribosomal protein S13
 gi|71851374|gb|AAZ43983.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53]
          Length = 122

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG   + +IC K  +    +  +L E+++ ++R+ +
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGKSLASEICKKANVDENTKTAELTEAQLSKLRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y  EGDLRR V +NIKR M++ CYRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  AKAYTTEGDLRREVTLNIKRYMEIKCYRGIRHRKGLPVRGQSTQKNARTRK 110


>gi|83814971|ref|YP_445189.1| 30S ribosomal protein S13 [Salinibacter ruber DSM 13855]
 gi|294507073|ref|YP_003571131.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
 gi|123529118|sp|Q2S3P2|RS13_SALRD RecName: Full=30S ribosomal protein S13
 gi|83756365|gb|ABC44478.1| ribosomal protein S13p/S18e [Salinibacter ruber DSM 13855]
 gi|294343401|emb|CBH24179.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
          Length = 127

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV++P  KR   AL  I+G+G   + +I  K  +  ++R  +  ESE  ++R+ I
Sbjct: 1   MPRIEGVDVPDDKRGEIALTDIYGVGQSRASEILEKAEVSVDKRPREWTESETKRVRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+DY VEG LR  V MNIKRL ++GCYRG RHR GLPV GQRT TNARTRK
Sbjct: 61  EEDYTVEGQLRTEVQMNIKRLKEIGCYRGKRHREGLPVNGQRTRTNARTRK 111


>gi|23466154|ref|NP_696757.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|46190440|ref|ZP_00121530.2| COG0099: Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|189440593|ref|YP_001955674.1| 30S ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|227546500|ref|ZP_03976549.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239621034|ref|ZP_04664065.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133898|ref|YP_004001237.1| rpsm [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483426|ref|ZP_07942416.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689905|ref|YP_004209639.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691846|ref|YP_004221416.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|32363330|sp|Q8G3Z5|RS13_BIFLO RecName: Full=30S ribosomal protein S13
 gi|226712697|sp|B3DQD8|RS13_BIFLD RecName: Full=30S ribosomal protein S13
 gi|23326891|gb|AAN25393.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|189429028|gb|ACD99176.1| Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|227213049|gb|EEI80928.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239516135|gb|EEQ56002.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516447|emb|CBK70063.1| SSU ribosomal protein S13P [Bifidobacterium longum subsp. longum
           F8]
 gi|311773192|gb|ADQ02680.1| RpsM [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915112|gb|EFV36544.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456702|dbj|BAJ67324.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461241|dbj|BAJ71861.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           157F]
          Length = 125

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|53720798|ref|YP_109784.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243]
 gi|53723831|ref|YP_104143.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 23344]
 gi|76808694|ref|YP_335117.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710b]
 gi|121599064|ref|YP_994433.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1]
 gi|124383459|ref|YP_001027918.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229]
 gi|126441434|ref|YP_001060727.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668]
 gi|126450605|ref|YP_001083013.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247]
 gi|126452378|ref|YP_001068011.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a]
 gi|134283124|ref|ZP_01769825.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305]
 gi|167001676|ref|ZP_02267468.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20]
 gi|167721554|ref|ZP_02404790.1| 30S ribosomal protein S13 [Burkholderia pseudomallei DM98]
 gi|167740528|ref|ZP_02413302.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 14]
 gi|167817733|ref|ZP_02449413.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 91]
 gi|167826130|ref|ZP_02457601.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 9]
 gi|167838189|ref|ZP_02465048.1| 30S ribosomal protein S13 [Burkholderia thailandensis MSMB43]
 gi|167847642|ref|ZP_02473150.1| 30S ribosomal protein S13 [Burkholderia pseudomallei B7210]
 gi|167896214|ref|ZP_02483616.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 7894]
 gi|167904596|ref|ZP_02491801.1| 30S ribosomal protein S13 [Burkholderia pseudomallei NCTC 13177]
 gi|167912861|ref|ZP_02499952.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 112]
 gi|167920820|ref|ZP_02507911.1| 30S ribosomal protein S13 [Burkholderia pseudomallei BCC215]
 gi|217424717|ref|ZP_03456214.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576]
 gi|226198266|ref|ZP_03793837.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9]
 gi|237814122|ref|YP_002898573.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346]
 gi|238562961|ref|ZP_00439643.2| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4]
 gi|242316204|ref|ZP_04815220.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b]
 gi|254175202|ref|ZP_04881863.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399]
 gi|254180362|ref|ZP_04886960.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655]
 gi|254190325|ref|ZP_04896833.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237]
 gi|254198511|ref|ZP_04904932.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13]
 gi|254201216|ref|ZP_04907580.1| 30S ribosomal protein S13 [Burkholderia mallei FMH]
 gi|254206557|ref|ZP_04912908.1| 30S ribosomal protein S13 [Burkholderia mallei JHU]
 gi|254261560|ref|ZP_04952614.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a]
 gi|254300599|ref|ZP_04968044.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e]
 gi|254357095|ref|ZP_04973369.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280]
 gi|81378947|sp|Q63Q34|RS13_BURPS RecName: Full=30S ribosomal protein S13
 gi|81604188|sp|Q62GM8|RS13_BURMA RecName: Full=30S ribosomal protein S13
 gi|91207691|sp|Q3JMT6|RS13_BURP1 RecName: Full=30S ribosomal protein S13
 gi|158706218|sp|A3P090|RS13_BURP0 RecName: Full=30S ribosomal protein S13
 gi|166231899|sp|A3MRX7|RS13_BURM7 RecName: Full=30S ribosomal protein S13
 gi|166231900|sp|A2S7J9|RS13_BURM9 RecName: Full=30S ribosomal protein S13
 gi|166231901|sp|A1V880|RS13_BURMS RecName: Full=30S ribosomal protein S13
 gi|166231902|sp|A3NEF6|RS13_BURP6 RecName: Full=30S ribosomal protein S13
 gi|52211212|emb|CAH37201.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243]
 gi|52427254|gb|AAU47847.1| ribosomal protein S13 [Burkholderia mallei ATCC 23344]
 gi|76578147|gb|ABA47622.1| ribosomal protein S13p/S18e [Burkholderia pseudomallei 1710b]
 gi|121227874|gb|ABM50392.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1]
 gi|124291479|gb|ABN00748.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229]
 gi|126220927|gb|ABN84433.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668]
 gi|126226020|gb|ABN89560.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a]
 gi|126243475|gb|ABO06568.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247]
 gi|134245319|gb|EBA45412.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305]
 gi|147747110|gb|EDK54186.1| 30S ribosomal protein S13 [Burkholderia mallei FMH]
 gi|147752099|gb|EDK59165.1| 30S ribosomal protein S13 [Burkholderia mallei JHU]
 gi|148026159|gb|EDK84244.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280]
 gi|157810485|gb|EDO87655.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e]
 gi|157938001|gb|EDO93671.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237]
 gi|160696247|gb|EDP86217.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399]
 gi|169655251|gb|EDS87944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13]
 gi|184210901|gb|EDU07944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655]
 gi|217392173|gb|EEC32198.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576]
 gi|225929786|gb|EEH25802.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9]
 gi|237506633|gb|ACQ98951.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346]
 gi|238521645|gb|EEP85095.1| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4]
 gi|242139443|gb|EES25845.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b]
 gi|243062573|gb|EES44759.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20]
 gi|254220249|gb|EET09633.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a]
          Length = 121

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRK 110


>gi|296141065|ref|YP_003648308.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162]
 gi|296029199|gb|ADG79969.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162]
          Length = 123

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +I     + P+ R   L + ++ ++R  I
Sbjct: 1   MARLMGVDLPREKRMEIALTYIYGIGRTRATEILTATGVSPDLRSKDLSDEDLTKLRDFI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E  DY+VEGDLRR V  +I+R +++ CY+G+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGTDYKVEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVRGQRTKTNARTRK 112


>gi|154494403|ref|ZP_02033723.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC
           43184]
 gi|218262264|ref|ZP_03476787.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii
           DSM 18315]
 gi|154085847|gb|EDN84892.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC
           43184]
 gi|218223487|gb|EEC96137.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii
           DSM 18315]
          Length = 126

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  +S+ I +K  I  + +V    + +  ++R+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSASKSILDKAGIDRDIKVKDWTDDQAAKVREVIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRK 112


>gi|325287071|ref|YP_004262861.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489]
 gi|324322525|gb|ADY29990.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489]
          Length = 124

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I  K  +  + +V    + E+ +IR A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGRSRAKEILAKAQVSEDTKVSDWNDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EG+LR  + ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SE-FTIEGELRSEIQLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|332037271|gb|EGI73726.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 118

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDEILDVLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|81429354|ref|YP_396355.1| 30S ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K]
 gi|91207704|sp|Q38UT5|RS13_LACSS RecName: Full=30S ribosomal protein S13
 gi|78610997|emb|CAI56049.1| 30S Ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K]
          Length = 121

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI GIG  ++  +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRDKQIVIALTYIFGIGNTTAVKVLADAGVPTDVRTRDLTPDQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DT-VKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRK 110


>gi|170077664|ref|YP_001734302.1| ribosomal protein S13 [Synechococcus sp. PCC 7002]
 gi|226712794|sp|B1XJI6|RS13_SYNP2 RecName: Full=30S ribosomal protein S13
 gi|169885333|gb|ACA99046.1| ribosomal protein S13 [Synechococcus sp. PCC 7002]
          Length = 125

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL Y++GIG   +Q+I     + P+ RV  L + + +++R  +
Sbjct: 1   MARIAGVDLPRDKRIEIALTYVYGIGLSRAQEIIANTGVNPDTRVRDLSDEDALKLRSYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
             +YQVEGDLRR  +MNIKRL+D+G YRG RHR+GLPVRGQ
Sbjct: 61  TDNYQVEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQ 101


>gi|83720972|ref|YP_443549.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264]
 gi|167582600|ref|ZP_02375474.1| 30S ribosomal protein S13 [Burkholderia thailandensis TXDOH]
 gi|167620714|ref|ZP_02389345.1| 30S ribosomal protein S13 [Burkholderia thailandensis Bt4]
 gi|257137665|ref|ZP_05585927.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264]
 gi|123536224|sp|Q2SU50|RS13_BURTA RecName: Full=30S ribosomal protein S13
 gi|83654797|gb|ABC38860.1| ribosomal protein S13p/S18e [Burkholderia thailandensis E264]
          Length = 121

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|116334245|ref|YP_795772.1| 30S ribosomal protein S13 [Lactobacillus brevis ATCC 367]
 gi|122269073|sp|Q03PY1|RS13_LACBA RecName: Full=30S ribosomal protein S13
 gi|116099592|gb|ABJ64741.1| SSU ribosomal protein S13P [Lactobacillus brevis ATCC 367]
          Length = 121

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++PR KR+   L YI GIG  ++  I     +P + RV  L   +  ++R  +
Sbjct: 1   MPRIAGVDLPRDKRIAYGLTYIFGIGINTAHKIVADAGVPEDVRVRDLTPDQEDKVRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y+VEGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DK-YKVEGDLRREVSLNIKNLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|34849415|gb|AAP58914.1| ribosomal protein S13 [Spiroplasma kunkelii CR2-3x]
          Length = 121

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KRVV AL YI+GIG   SQ I  +  I  + RV  L E E+  IR  I
Sbjct: 1   MARIGGVDIPNDKRVVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  + EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ +  NART K
Sbjct: 61  AK-LKTEGDLRREVALNIKRLMEIGSYRGMRHRKSLPTRGQSSKQNARTVK 110


>gi|41410328|ref|NP_963164.1| 30S ribosomal protein S13 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254776833|ref|ZP_05218349.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|81412936|sp|Q73S46|RS13_MYCPA RecName: Full=30S ribosomal protein S13
 gi|158706370|sp|A0QKU8|RS13_MYCA1 RecName: Full=30S ribosomal protein S13
 gi|41399162|gb|AAS06780.1| RpsM [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 124

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|118602235|ref|YP_903450.1| 30S ribosomal protein S13 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|158706273|sp|A1AVM2|RS13_RUTMC RecName: Full=30S ribosomal protein S13
 gi|118567174|gb|ABL01979.1| SSU ribosomal protein S13P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 117

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   ++  C  L + P  +V  + E ++  IR  +
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAKATCKILKLDPATKVVDIAEDQLELIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEGDLRR V+M+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK
Sbjct: 61  AK-YEVEGDLRRQVSMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRK 110


>gi|296120767|ref|YP_003628545.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776]
 gi|296013107|gb|ADG66346.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776]
          Length = 128

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/121 (49%), Positives = 80/121 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K    +L Y++G+G   + +IC KL I P+R+  +L + E+ +I   +
Sbjct: 1   MPRIQGVDIPNDKPTYISLQYLYGVGDFRAFEICFKLEIDPQRKARELSDDELARISAML 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEG LRR++  NI RL D+  YRGLRHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  DKDYLVEGSLRRSIQQNISRLRDIQSYRGLRHRRGLPCRGQRTRTNARTRKGIKKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|296168682|ref|ZP_06850431.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896591|gb|EFG76232.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 124

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDKDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|294786436|ref|ZP_06751690.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
 gi|294485269|gb|EFG32903.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
          Length = 134

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 12  MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK
Sbjct: 72  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 122


>gi|315225999|ref|ZP_07867787.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
 gi|315120131|gb|EFT83263.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
          Length = 123

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 1   MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK
Sbjct: 61  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRK 111


>gi|326334522|ref|ZP_08200733.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693291|gb|EGD35219.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 124

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I  K  +  + +V    + ++ +IR+A+
Sbjct: 1   MARIAGIDLPKHKRGVIGLTYIFGIGKSRAKEILKKAQVDEDIKVSDWNDEQITRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK
Sbjct: 61  SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRK 110


>gi|315225423|ref|ZP_07867237.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287]
 gi|314944696|gb|EFS96731.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287]
          Length = 124

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEITRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK
Sbjct: 61  -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110


>gi|32423693|gb|AAP81236.1| ribosomal protein S13 [Candidatus Portiera aleyrodidarum]
          Length = 116

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG NIP  K+V  +L YI+GIG   +  IC ++ I    +V  L   ++ ++R+ +
Sbjct: 1   MARIAGRNIPDNKQVWVSLTYIYGIGKYRANSICKRIGIDRNVKVRDLNSIQLDKVRKQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + + VEG+LRR V++NIKRLMDLGCYRGLRH+R LPVRGQRT TNART K   KG
Sbjct: 61  CK-FVVEGELRREVSVNIKRLMDLGCYRGLRHKRCLPVRGQRTKTNARTCKNINKG 115


>gi|283768439|ref|ZP_06341351.1| 30S ribosomal protein S13 [Bulleidia extructa W1219]
 gi|283104831|gb|EFC06203.1| 30S ribosomal protein S13 [Bulleidia extructa W1219]
          Length = 121

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+IPR K +  +L YI+GIG  +++ I  +  I P  R  +L + +   IR  +
Sbjct: 1   MPRIAGVDIPRHKVIGISLTYIYGIGPTTAKKILEECGIDPSTRTSELTDEQETAIRSKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   + EGDLRR  A++IKRLM++G YRG RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DS-VKTEGDLRRDTALDIKRLMEIGSYRGTRHRRGLPVRGQRTKTNARTRK 110


>gi|256820005|ref|YP_003141284.1| 30S ribosomal protein S13 [Capnocytophaga ochracea DSM 7271]
 gi|256581588|gb|ACU92723.1| ribosomal protein S13 [Capnocytophaga ochracea DSM 7271]
          Length = 124

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDEEITRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK
Sbjct: 61  -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110


>gi|325955020|ref|YP_004238680.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922]
 gi|323437638|gb|ADX68102.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922]
          Length = 125

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR V  L YI+G+G  ++  I  +  I  +++V +  + E+  IR +I
Sbjct: 1   MARISGVDLPKNKRGVIGLTYIYGVGKSTASRILAENNISEDKKVSEWTDDEINAIRNSI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  NEGIKVEGELRSEVQLNIKRLMDIGCTRGIRHRLGLPLRGQRTKNNSRTRK 111


>gi|284033974|ref|YP_003383905.1| 30S ribosomal protein S13 [Kribbella flavida DSM 17836]
 gi|283813267|gb|ADB35106.1| ribosomal protein S13 [Kribbella flavida DSM 17836]
          Length = 123

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 79/111 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +        I  ++RVH+L + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVALTYIFGVGRTRALKTLEATGISGDKRVHELGDEELVKLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R +++G Y+G RHR GLPVRGQRT TNAR+RK
Sbjct: 61  EGNYKIEGDLRREVTADIRRKIEIGSYQGRRHRSGLPVRGQRTRTNARSRK 111


>gi|88861472|ref|ZP_01136098.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2]
 gi|88816520|gb|EAR26349.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2]
          Length = 118

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+G+G   S+ I     I    ++ +L +  +  +R+ +
Sbjct: 1   MARIAGINVPDHKHAVIALTAIYGVGKTRSKAILAATGIAETTKIGELNDETLDVLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  LK-YTVEGDLRREITLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 110


>gi|239818006|ref|YP_002946916.1| ribosomal protein S13 [Variovorax paradoxus S110]
 gi|319796383|ref|YP_004158023.1| 30S ribosomal protein s13 [Variovorax paradoxus EPS]
 gi|259494694|sp|C5CQ78|RS13_VARPS RecName: Full=30S ribosomal protein S13
 gi|239804583|gb|ACS21650.1| ribosomal protein S13 [Variovorax paradoxus S110]
 gi|315598846|gb|ADU39912.1| 30S ribosomal protein S13 [Variovorax paradoxus EPS]
          Length = 121

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L ++++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTRARQICEASGIEYSKKIKDLTDADLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK
Sbjct: 61  AL-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRK 110


>gi|213693064|ref|YP_002323650.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|254811130|sp|B7GNB6|RS13_BIFLI RecName: Full=30S ribosomal protein S13
 gi|213524525|gb|ACJ53272.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459242|dbj|BAJ69863.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 125

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|291457227|ref|ZP_06596617.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
 gi|291381062|gb|EFE88580.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
          Length = 125

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|319942195|ref|ZP_08016511.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B]
 gi|319804248|gb|EFW01140.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B]
          Length = 121

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   S+ I  +  IP  ++V  L ++E+ +IR A+
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIYGIGRSRSRLILEQCGIPCTKKVQDLTDAELERIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLP RGQRT TNARTRK   K GV  
Sbjct: 61  SK-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPCRGQRTRTNARTRKGPRKVGVTL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|319952173|ref|YP_004163440.1| ssu ribosomal protein s13p [Cellulophaga algicola DSM 14237]
 gi|319420833|gb|ADV47942.1| SSU ribosomal protein S13P [Cellulophaga algicola DSM 14237]
          Length = 124

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I     +  + +V    + E+ +IR+++
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGNSRAKEILANAQVSEDTKVSDWNDDEISRIRESV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|257453245|ref|ZP_05618544.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_5R]
 gi|257467160|ref|ZP_05631471.1| 30S ribosomal protein S13 [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918291|ref|ZP_07914531.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059779|ref|ZP_07924264.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
 gi|313685455|gb|EFS22290.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
 gi|313692166|gb|EFS29001.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 118

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR+ I
Sbjct: 1   MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|254819218|ref|ZP_05224219.1| 30S ribosomal protein S13 [Mycobacterium intracellulare ATCC 13950]
          Length = 124

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S +I     I    R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILEATGIDKNLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|225010539|ref|ZP_03701010.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C]
 gi|225005368|gb|EEG43319.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C]
          Length = 124

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I     +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGRTRAKEILIAAGVSEDTKVSDWNDDEISKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRTGLPLRGQRTKNNSRTRK 110


>gi|307297370|ref|ZP_07577176.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916630|gb|EFN47012.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 122

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL YI+GIG+  S +I +   I   +R   L + EV +I + I
Sbjct: 1   MARILGVELPNNKKTFVALTYIYGIGYTRSNEILSGTEIDGNKRAKDLTDEEVSKIAKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y+VEG+LR  V  +IKRL+++G YRG RHR GLPVRGQ+TH+N RTRK
Sbjct: 61  NEHYKVEGELRTEVDRSIKRLIEIGSYRGYRHRNGLPVRGQKTHSNGRTRK 111


>gi|258651409|ref|YP_003200565.1| 30S ribosomal protein S13 [Nakamurella multipartita DSM 44233]
 gi|258554634|gb|ACV77576.1| ribosomal protein S13 [Nakamurella multipartita DSM 44233]
          Length = 125

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S ++     I P+ R   L + +V+ +R AI
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSLELLAATGISPDLRSKDLTDEDVLALRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  D +VEGDLRR V  +I+R M++G Y+GLRHRR LPVRGQRT TNARTRK
Sbjct: 61  DAADLKVEGDLRREVQADIRRKMEIGSYQGLRHRRHLPVRGQRTKTNARTRK 112


>gi|116515237|ref|YP_802866.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285367|sp|Q057C6|RS13_BUCCC RecName: Full=30S ribosomal protein S13
 gi|58384670|gb|AAW72685.1| 30S ribosomal protein S13 [Buchnera aphidicola (Cinara cedri)]
 gi|116257091|gb|ABJ90773.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 119

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+NI   K ++ AL  I+GIG   S+ IC  + I  + +++ L + ++  +R  I
Sbjct: 1   MTRIAGINISDKKHILVALTSIYGIGISLSKKICFSIGIRCDVKINSLTKEKIESLRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR   +NIKRLMD+GCYRGLRHR+ LPVRGQRT TNARTRK
Sbjct: 61  SK-FLVEGDLRREKTINIKRLMDIGCYRGLRHRKHLPVRGQRTKTNARTRK 110


>gi|283780397|ref|YP_003371152.1| 30S ribosomal protein S13 [Pirellula staleyi DSM 6068]
 gi|283438850|gb|ADB17292.1| ribosomal protein S13 [Pirellula staleyi DSM 6068]
          Length = 127

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K  V +L Y++G+G   ++++C K  I  E+R   L E E+ ++   +
Sbjct: 1   MPRLLGVDIPNDKPTVISLGYLYGVGDHVARELCQKAGIDTEKRARDLSEEELARLATLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+DY VEG LRR V  NI RL D+ CYRG+RHR GLPVRGQRT TNARTRK
Sbjct: 61  ERDYTVEGPLRRLVQQNINRLRDIKCYRGIRHRLGLPVRGQRTKTNARTRK 111


>gi|283782777|ref|YP_003373531.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05]
 gi|297242946|ref|ZP_06926884.1| ribosomal protein S13 [Gardnerella vaginalis AMD]
 gi|308235471|ref|ZP_07666208.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14018]
 gi|311115144|ref|YP_003986365.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019]
 gi|283441639|gb|ADB14105.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05]
 gi|296889157|gb|EFH27891.1| ribosomal protein S13 [Gardnerella vaginalis AMD]
 gi|310946638|gb|ADP39342.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019]
          Length = 125

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      + P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGVNPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|297625815|ref|YP_003687578.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921580|emb|CBL56134.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 124

 Score =  118 bits (295), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 80/111 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   +  I     I P+ RV  + +++++++R  I
Sbjct: 1   MARLQGVDLPREKRLEVALTYIFGIGKTRADAILEATGISPDIRVKDVTDAQLVELRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y+VEGDLRR+V  +I+R +++G Y+G RHR GLPVRGQRT TNARTRK
Sbjct: 61  DANYEVEGDLRRSVDADIRRKIEIGTYQGRRHRAGLPVRGQRTRTNARTRK 111


>gi|30468201|ref|NP_849088.1| ribosomal protein S13 [Cyanidioschyzon merolae strain 10D]
 gi|32363230|sp|P59758|RR13_CYAME RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|30409301|dbj|BAC76250.1| 30S ribosomal protein S13 [Cyanidioschyzon merolae strain 10D]
          Length = 123

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 79/109 (72%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGV++P  K++  AL Y++GIG   +++I     + P+ RV  + + + +++RQ IEQ
Sbjct: 2   RIAGVDLPSQKKLEVALTYLYGIGKTLAKEILEACQLSPDLRVRDVNDEQSMRLRQYIEQ 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y +E DL+R  +MNIKRLMD+GCYRG RHR  LPVRGQRT +NARTR+
Sbjct: 62  KYLIESDLKRVESMNIKRLMDIGCYRGRRHRALLPVRGQRTRSNARTRR 110


>gi|256821684|ref|YP_003145647.1| 30S ribosomal protein S13 [Kangiella koreensis DSM 16069]
 gi|256795223|gb|ACV25879.1| ribosomal protein S13 [Kangiella koreensis DSM 16069]
          Length = 118

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K    AL  I+GIG   +Q IC    +    ++  L + ++  +R  +
Sbjct: 1   MARIAGINIPVHKHADVALTAIYGIGRPRAQKICAAAGVETTAKIKDLNDDQIENLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR + MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK
Sbjct: 61  SK-FTVEGDLRREINMNIKRLMDLGCFRGIRHRRNLPLRGQRTKTNARTRK 110


>gi|32491314|ref|NP_871568.1| 30S ribosomal protein S13 [Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis]
 gi|32363313|sp|Q8D1Z0|RS13_WIGBR RecName: Full=30S ribosomal protein S13
 gi|25166521|dbj|BAC24711.1| rpsM [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 118

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVNIP  K +V AL  I+GIG   ++ IC K  I   ++V+ L  SE+  IR  +
Sbjct: 1   MTRIAGVNIPEKKHIVIALKKIYGIGNVLARKICKKTGINFSKKVNSLDSSEIELIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  ++EGDLRR + +NIKRL+DLG YRGLRH++ LPVRGQRT TNARTRK
Sbjct: 61  LK-LKIEGDLRREMTLNIKRLIDLGTYRGLRHKKHLPVRGQRTKTNARTRK 110


>gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202]
 gi|282855173|ref|ZP_06264505.1| 30S ribosomal protein S13 [Propionibacterium acnes J139]
 gi|289424822|ref|ZP_06426604.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187]
 gi|289427645|ref|ZP_06429357.1| 30S ribosomal protein S13 [Propionibacterium acnes J165]
 gi|295131355|ref|YP_003582018.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137]
 gi|81611215|sp|Q6A6Q8|RS13_PROAC RecName: Full=30S ribosomal protein S13
 gi|50840888|gb|AAT83555.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202]
 gi|282581761|gb|EFB87146.1| 30S ribosomal protein S13 [Propionibacterium acnes J139]
 gi|289154785|gb|EFD03468.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187]
 gi|289159136|gb|EFD07328.1| 30S ribosomal protein S13 [Propionibacterium acnes J165]
 gi|291376040|gb|ADD99894.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137]
 gi|313763206|gb|EFS34570.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA1]
 gi|313773121|gb|EFS39087.1| 30S ribosomal protein S13 [Propionibacterium acnes HL074PA1]
 gi|313793289|gb|EFS41347.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA1]
 gi|313801067|gb|EFS42335.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA2]
 gi|313808808|gb|EFS47262.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA2]
 gi|313810398|gb|EFS48112.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA1]
 gi|313812266|gb|EFS49980.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA1]
 gi|313816543|gb|EFS54257.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA1]
 gi|313817987|gb|EFS55701.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA2]
 gi|313819900|gb|EFS57614.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA1]
 gi|313823391|gb|EFS61105.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA2]
 gi|313824862|gb|EFS62576.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA1]
 gi|313828396|gb|EFS66110.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA2]
 gi|313830104|gb|EFS67818.1| 30S ribosomal protein S13 [Propionibacterium acnes HL007PA1]
 gi|313832624|gb|EFS70338.1| 30S ribosomal protein S13 [Propionibacterium acnes HL056PA1]
 gi|313837980|gb|EFS75694.1| 30S ribosomal protein S13 [Propionibacterium acnes HL086PA1]
 gi|314914363|gb|EFS78194.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA4]
 gi|314917683|gb|EFS81514.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA1]
 gi|314919585|gb|EFS83416.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA3]
 gi|314924150|gb|EFS87981.1| 30S ribosomal protein S13 [Propionibacterium acnes HL001PA1]
 gi|314925757|gb|EFS89588.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA3]
 gi|314930175|gb|EFS94006.1| 30S ribosomal protein S13 [Propionibacterium acnes HL067PA1]
 gi|314957152|gb|EFT01256.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA1]
 gi|314957793|gb|EFT01896.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA1]
 gi|314960837|gb|EFT04938.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA2]
 gi|314963511|gb|EFT07611.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA1]
 gi|314964879|gb|EFT08978.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA2]
 gi|314969906|gb|EFT14004.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA1]
 gi|314973047|gb|EFT17143.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA1]
 gi|314975543|gb|EFT19638.1| 30S ribosomal protein S13 [Propionibacterium acnes HL045PA1]
 gi|314979768|gb|EFT23862.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA2]
 gi|314982285|gb|EFT26378.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA3]
 gi|314984826|gb|EFT28918.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA1]
 gi|314986085|gb|EFT30177.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA2]
 gi|314988700|gb|EFT32791.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA3]
 gi|315077132|gb|EFT49199.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA2]
 gi|315079819|gb|EFT51795.1| 30S ribosomal protein S13 [Propionibacterium acnes HL078PA1]
 gi|315083186|gb|EFT55162.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA2]
 gi|315086860|gb|EFT58836.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA3]
 gi|315089952|gb|EFT61928.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA1]
 gi|315090474|gb|EFT62450.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA4]
 gi|315093707|gb|EFT65683.1| 30S ribosomal protein S13 [Propionibacterium acnes HL060PA1]
 gi|315096726|gb|EFT68702.1| 30S ribosomal protein S13 [Propionibacterium acnes HL038PA1]
 gi|315097954|gb|EFT69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA2]
 gi|315100597|gb|EFT72573.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA1]
 gi|315103999|gb|EFT75975.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA2]
 gi|315106040|gb|EFT78016.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA1]
 gi|315109200|gb|EFT81176.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA2]
 gi|327325140|gb|EGE66946.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA3]
 gi|327325231|gb|EGE67036.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA2]
 gi|327325527|gb|EGE67326.1| 30S ribosomal protein S13 [Propionibacterium acnes HL103PA1]
 gi|327332740|gb|EGE74474.1| 30S ribosomal protein S13 [Propionibacterium acnes HL097PA1]
 gi|327444031|gb|EGE90685.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA1]
 gi|327449341|gb|EGE95995.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA2]
 gi|327449431|gb|EGE96085.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA2]
 gi|327451453|gb|EGE98107.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA3]
 gi|327451572|gb|EGE98226.1| 30S ribosomal protein S13 [Propionibacterium acnes HL092PA1]
 gi|327451859|gb|EGE98513.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA2]
 gi|328752073|gb|EGF65689.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA1]
 gi|328755529|gb|EGF69145.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA2]
 gi|328756314|gb|EGF69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL020PA1]
 gi|328761352|gb|EGF74879.1| 30S ribosomal protein S13 [Propionibacterium acnes HL099PA1]
          Length = 123

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 78/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I  + RVH+L + +++ +R  I
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR
Sbjct: 61  EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110


>gi|110004252|emb|CAK98590.1| 30s ribosomal protein s13 [Spiroplasma citri]
          Length = 121

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KR V AL YI+GIG   SQ I  +  I  + RV  L E E+  IR  I
Sbjct: 1   MARIGGVDIPNDKRAVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  ++EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ +  NART K
Sbjct: 61  AK-LKIEGDLRREVALNIKRLMEIGSYRGMRHRKSLPARGQSSKQNARTVK 110


>gi|404593|gb|AAD10542.1| uncertain [Mycoplasma genitalium]
          Length = 117

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 74/104 (71%), Gaps = 1/104 (0%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           +IP  KR+  AL YI GIG  S++ I  K  I P++RV  L E E++ IR A    Y++E
Sbjct: 1   DIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA-ASGYKIE 59

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           GDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK
Sbjct: 60  GDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRK 103


>gi|78189783|ref|YP_380121.1| 30S ribosomal protein S13 [Chlorobium chlorochromatii CaD3]
 gi|91207694|sp|Q3APJ7|RS13_CHLCH RecName: Full=30S ribosomal protein S13
 gi|78171982|gb|ABB29078.1| SSU ribosomal protein S13P [Chlorobium chlorochromatii CaD3]
          Length = 125

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL +++GIG  S+++I  K  I  ++++ +L + E   IR+ I +
Sbjct: 2   RLAGVNLPLNKHAVIALTHVYGIGRTSAENILRKAGIAYDKKISELSDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 62  EYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRK 110


>gi|227538695|ref|ZP_03968744.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300770228|ref|ZP_07080107.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC
           33861]
 gi|227241614|gb|EEI91629.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300762704|gb|EFK59521.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 125

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG +++  I +K  I  + +V    + ++  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGRQTAAYILDKAGISEDVKVQDWNDDQLAAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             + +VEG LR  V +NIKRLMD+GCYRGLRHR+ LPVRGQRT  N RTRK
Sbjct: 61  NDELKVEGALRSEVQLNIKRLMDIGCYRGLRHRKHLPVRGQRTKNNTRTRK 111


>gi|21672748|ref|NP_660815.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009164|sp|Q8K971|RS13_BUCAP RecName: Full=30S ribosomal protein S13
 gi|21623394|gb|AAM68026.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 118

 Score =  117 bits (294), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  + AL  I+GIG K S+ IC    I    ++  L E E+  +R+ +
Sbjct: 1   MARIAGINIPEHKHALIALTSIYGIGKKRSKIICFNANIAENSKISDLKEEEIELLRENV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            + Y  EGDLRR   +NIKRL+DL CYRGLRHRR LPVRGQRT TNART
Sbjct: 61  AK-YVTEGDLRREKTLNIKRLIDLNCYRGLRHRRSLPVRGQRTKTNART 108


>gi|330997341|ref|ZP_08321192.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841]
 gi|329570715|gb|EGG52431.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841]
          Length = 126

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 73/109 (66%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  SS  I  K  +  + +V    + +   IR  I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSSAKILAKAGVDKDIKVKDWTDEQASNIRAVIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EYKVEGDLRAEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRK 112


>gi|21230385|ref|NP_636302.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|21903472|sp|Q9Z3F0|RS13_XANCP RecName: Full=30S ribosomal protein S13
 gi|21111942|gb|AAM40226.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
          Length = 118

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRG P+RGQRT TNARTRK
Sbjct: 61  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGHPLRGQRTRTNARTRK 110


>gi|313836057|gb|EFS73771.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA2]
 gi|314929593|gb|EFS93424.1| 30S ribosomal protein S13 [Propionibacterium acnes HL044PA1]
 gi|314970520|gb|EFT14618.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA3]
 gi|328906198|gb|EGG25973.1| 30S ribosomal protein S13 [Propionibacterium sp. P08]
          Length = 123

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 77/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I  + RVH+L + +++ +R  I
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKTTGISGDLRVHELTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E  Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR
Sbjct: 61  EASYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110


>gi|563203|gb|AAB17598.1| ribosomal protein S13 [Mycobacterium bovis]
 gi|1589487|prf||2211287D ribosomal protein S13
          Length = 123

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MDRLVGVDLPRHKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 111


>gi|184155967|ref|YP_001844307.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956]
 gi|227515511|ref|ZP_03945560.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931]
 gi|260662776|ref|ZP_05863670.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN]
 gi|226712752|sp|B2GDU5|RS13_LACF3 RecName: Full=30S ribosomal protein S13
 gi|183227311|dbj|BAG27827.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956]
 gi|227086124|gb|EEI21436.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931]
 gi|260552857|gb|EEX25856.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN]
          Length = 121

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILANAGVSEDIRVRDLTPDQEEKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Q  +VEGDLRR V++NIKRL ++G YRG+RHR GLPVRGQ T  NARTRK
Sbjct: 61  DQ-IKVEGDLRREVSLNIKRLQEIGSYRGMRHRHGLPVRGQHTKNNARTRK 110


>gi|91786408|ref|YP_547360.1| 30S ribosomal protein S13 [Polaromonas sp. JS666]
 gi|123165434|sp|Q12G80|RS13_POLSJ RecName: Full=30S ribosomal protein S13
 gi|91695633|gb|ABE42462.1| SSU ribosomal protein S13P [Polaromonas sp. JS666]
          Length = 121

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEACDIAYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   A 
Sbjct: 61  AL-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703]
          Length = 136

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 12  MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 72  EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 122


>gi|302524018|ref|ZP_07276360.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4]
 gi|302432913|gb|EFL04729.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4]
          Length = 126

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 82/111 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +     +  + RV  L + ++++++  I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIYGIGRTRSKQMIAAAELNADTRVKDLSDEDLVKLKDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++++VEGDLRR V  +I+R +++G Y+GLR RRGLPVRGQRT TNARTRK
Sbjct: 61  DENFKVEGDLRREVNADIRRKIEIGTYQGLRWRRGLPVRGQRTKTNARTRK 111


>gi|213962874|ref|ZP_03391134.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno]
 gi|213954531|gb|EEB65853.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno]
          Length = 124

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEISRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK
Sbjct: 61  -ASYKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRK 110


>gi|118616622|ref|YP_904954.1| 30S ribosomal protein S13 [Mycobacterium ulcerans Agy99]
 gi|183981107|ref|YP_001849398.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
 gi|158706253|sp|A0PMB4|RS13_MYCUA RecName: Full=30S ribosomal protein S13
 gi|226712767|sp|B2HCX1|RS13_MYCMM RecName: Full=30S ribosomal protein S13
 gi|118568732|gb|ABL03483.1| 30S ribosomal protein S13, RpsM [Mycobacterium ulcerans Agy99]
 gi|183174433|gb|ACC39543.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
          Length = 124

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   S +I     I    R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E + ++EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|310779571|ref|YP_003967904.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926]
 gi|309748894|gb|ADO83556.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926]
          Length = 118

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG  +SQ +  +  +    RV  L E E+ ++R AI
Sbjct: 1   MARIAGVDIPRNKRIEIALTYIYGIGKSTSQKVLKEAGVDFNTRVKDLTEEELNKVR-AI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ++ TNART K
Sbjct: 60  IDTVKVEGDLRKDVRLSVKRLMDIRCYRGLRHKMNLPVRGQKSKTNARTVK 110


>gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis
           L2-32]
 gi|162229911|ref|YP_909208.2| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703]
 gi|171741250|ref|ZP_02917057.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC
           27678]
 gi|212716588|ref|ZP_03324716.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM
           16992]
 gi|224283733|ref|ZP_03647055.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
 gi|225351021|ref|ZP_03742044.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|283455390|ref|YP_003359954.1| 30S ribosomal protein S13P [Bifidobacterium dentium Bd1]
 gi|306823544|ref|ZP_07456919.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679]
 gi|309802871|ref|ZP_07696972.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022]
 gi|310288000|ref|YP_003939259.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17]
 gi|311064873|ref|YP_003971599.1| 30S ribosomal protein S13P RpsM [Bifidobacterium bifidum PRL2010]
 gi|313140889|ref|ZP_07803082.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
 gi|158706364|sp|A1A093|RS13_BIFAA RecName: Full=30S ribosomal protein S13
 gi|154084634|gb|EDN83679.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis
           L2-32]
 gi|171276864|gb|EDT44525.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC
           27678]
 gi|212660292|gb|EEB20867.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM
           16992]
 gi|225158477|gb|EEG71719.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|283102024|gb|ADB09130.1| rpsM SSU ribosomal protein S13P [Bifidobacterium dentium Bd1]
 gi|304553251|gb|EFM41163.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679]
 gi|308220338|gb|EFO76649.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022]
 gi|309251937|gb|ADO53685.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17]
 gi|310867193|gb|ADP36562.1| RpsM SSU ribosomal protein S13P [Bifidobacterium bifidum PRL2010]
 gi|313133399|gb|EFR51016.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
          Length = 125

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|238025955|ref|YP_002910186.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1]
 gi|237875149|gb|ACR27482.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1]
          Length = 121

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVDFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|163786167|ref|ZP_02180615.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1]
 gi|159878027|gb|EDP72083.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1]
          Length = 124

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V +L YI+G+G   +++I     +    +V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVISLTYIYGVGRSRAKEILATAKVDESTKVQDWSDDEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              +++EG+LR    MNIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GT-FKIEGELRSETQMNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRK 110


>gi|330815272|ref|YP_004358977.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3]
 gi|327367665|gb|AEA59021.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3]
          Length = 121

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVEFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRK 110


>gi|271962661|ref|YP_003336857.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021]
 gi|270505836|gb|ACZ84114.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021]
          Length = 126

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 78/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   + +      +  + RVHQL + E++ +R  I
Sbjct: 1   MARLVGVDLPRDKRLEIALTYIFGIGRTRALETLKATGVNGDLRVHQLTDEELVPLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y++EGDLRR V  +I+R +++ CY+G+RHRRGLPV GQRT TNARTR
Sbjct: 61  EANYKIEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVHGQRTQTNARTR 110


>gi|28377856|ref|NP_784748.1| 30S ribosomal protein S13 [Lactobacillus plantarum WCFS1]
 gi|254556041|ref|YP_003062458.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1]
 gi|300767844|ref|ZP_07077754.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180034|ref|YP_003924162.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32363297|sp|Q88XW2|RS13_LACPL RecName: Full=30S ribosomal protein S13
 gi|28270689|emb|CAD63595.1| ribosomal protein S13 [Lactobacillus plantarum WCFS1]
 gi|254044968|gb|ACT61761.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1]
 gi|300494829|gb|EFK29987.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045525|gb|ADN98068.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 121

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KR+V  L YI+GIG  S+Q I  +  +  + RV  L   +  +IR A+
Sbjct: 1   MARIEGIDLPRDKRIVIGLTYIYGIGNTSAQKILAEAGVSEDVRVRDLTPDQEDKIR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y+ EGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 60  VDGYKTEGDLRREVSLNIKLLQEIGSYRGMRHRRGLPVRGQHTKNNARTRK 110


>gi|262383851|ref|ZP_06076987.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B]
 gi|301312009|ref|ZP_07217931.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3]
 gi|262294749|gb|EEY82681.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B]
 gi|300830111|gb|EFK60759.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3]
          Length = 126

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  +++ + +K  +  + +V    + +  ++R+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREVIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPLRGQSTKNNARTRK 112


>gi|220906741|ref|YP_002482052.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7425]
 gi|254811145|sp|B8HMS6|RS13_CYAP4 RecName: Full=30S ribosomal protein S13
 gi|219863352|gb|ACL43691.1| ribosomal protein S13 [Cyanothece sp. PCC 7425]
          Length = 126

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ I  +  + P+ R+ +L ++++  +R A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSQHILAETGVNPDTRIRELTDADISALRTAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  YQVEGDLRR   MNIKRL D+GCYRG RHR GLPVRGQ
Sbjct: 61  EA-YQVEGDLRRLENMNIKRLQDIGCYRGRRHRMGLPVRGQ 100


>gi|323144986|ref|ZP_08079546.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066]
 gi|322415265|gb|EFY06039.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066]
          Length = 128

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +ARIAG+N+P  K  V AL  ++GIG   +++I     +    +   L E+ V +IR+ +
Sbjct: 11  VARIAGINVPDHKIAVIALQSVYGIGPTRARNILAAAGVAESAKFKDLDEASVDKIREEV 70

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR ++MNIKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 71  AK-YTVEGDLRREISMNIKRLVDLGSYRGIRHRRGLPVRGQRTKTNARTRK 120


>gi|227501158|ref|ZP_03931207.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098]
 gi|227216743|gb|EEI82144.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098]
          Length = 114

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  +S +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTSNEILKNAGINPDTKMKDLTEEELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y +EGDLRR ++MNI+ L ++G YRGLRH+  LPVRGQ T  NARTRK
Sbjct: 61  -NNYHIEGDLRRDISMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNARTRK 110


>gi|319778702|ref|YP_004129615.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9]
 gi|317108726|gb|ADU91472.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9]
          Length = 121

 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   S+ IC    +   ++V  L + E+ +IR+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIYGIGRSRSRLICEAAGVETTKKVKDLTDDELEKIREKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             ++ VEGDLRR V ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  -GEFTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRK 110


>gi|150008961|ref|YP_001303704.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503]
 gi|255014791|ref|ZP_05286917.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_7]
 gi|256841038|ref|ZP_05546545.1| 30S ribosomal protein S13 [Parabacteroides sp. D13]
 gi|298375806|ref|ZP_06985762.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19]
 gi|158706340|sp|A6LEG8|RS13_PARD8 RecName: Full=30S ribosomal protein S13
 gi|149937385|gb|ABR44082.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503]
 gi|256736881|gb|EEU50208.1| 30S ribosomal protein S13 [Parabacteroides sp. D13]
 gi|298266843|gb|EFI08500.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19]
          Length = 126

 Score =  116 bits (291), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  +++ + +K  +  + +V    + +  ++R+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREVIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  EYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRVGLPLRGQSTKNNARTRK 112


>gi|330718949|ref|ZP_08313549.1| 30S ribosomal protein S13 [Leuconostoc fallax KCTC 3537]
          Length = 123

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR A+
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLTEAKVSEDVRVRDLTSDQEDAIRAAV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q + Q+EGDLRR ++++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DQLNLQLEGDLRRKISLDIKGLQEIAAYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|33519680|ref|NP_878512.1| 30S ribosomal protein S13 [Candidatus Blochmannia floridanus]
 gi|81666638|sp|Q7VQC6|RS13_BLOFL RecName: Full=30S ribosomal protein S13
 gi|33517343|emb|CAD83728.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia
           floridanus]
          Length = 118

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K  V AL  I+GIG   ++ IC  + +    ++ QL +  + ++R  I
Sbjct: 1   MVRIAGVNVPDRKHAVIALMSIYGIGRSRAKLICLSIGVDEYTKIGQLSDVYIDKMRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  AK-YVVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTRK 110


>gi|257463988|ref|ZP_05628373.1| 30S ribosomal protein S13 [Fusobacterium sp. D12]
 gi|317061510|ref|ZP_07925995.1| SSU ribosomal protein S13P [Fusobacterium sp. D12]
 gi|313687186|gb|EFS24021.1| SSU ribosomal protein S13P [Fusobacterium sp. D12]
          Length = 118

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L + E+ +IR+ I
Sbjct: 1   MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTDDEINKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K
Sbjct: 61  -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVK 110


>gi|296130464|ref|YP_003637714.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109]
 gi|296022279|gb|ADG75515.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109]
          Length = 126

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G   +        I P+ RV  L +++++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEVALTYIFGVGRTRAHQALAATGISPDVRVKDLDDAQLVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  +++EGDLRR +A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  DGSFKLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 111


>gi|257067036|ref|YP_003153292.1| 30S ribosomal protein S13 [Anaerococcus prevotii DSM 20548]
 gi|256798916|gb|ACV29571.1| ribosomal protein S13 [Anaerococcus prevotii DSM 20548]
          Length = 114

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y +EGDLRR V+MNI+ L ++G YRGLRH+  LPVRGQ T  NARTRK
Sbjct: 61  -NNYHIEGDLRREVSMNIRSLREIGSYRGLRHKNNLPVRGQNTKNNARTRK 110


>gi|299830618|ref|YP_003735066.1| 30S ribosomal protein S13 [Durinskia baltica]
 gi|297384982|gb|ADI40281.1| 30S ribosomal protein S13 [Durinskia baltica]
          Length = 123

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++  AL YIHGIG  +++ +     I  + RV+ L   + + +RQ I
Sbjct: 1   MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKKLIELAEIDSDLRVYDLTTEQAVALRQTI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ESSDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|228472158|ref|ZP_04056924.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276361|gb|EEK15085.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624]
          Length = 124

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I     +  + +V    + ++ +IR+A+
Sbjct: 1   MARIAGIDLPKHKRGVIGLTYIFGIGRSRAKEILKTAQVDEDIKVSDWNDEQITRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK
Sbjct: 61  SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRK 110


>gi|255038113|ref|YP_003088734.1| 30S ribosomal protein S13 [Dyadobacter fermentans DSM 18053]
 gi|254950869|gb|ACT95569.1| ribosomal protein S13 [Dyadobacter fermentans DSM 18053]
          Length = 125

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR   +L YI GIG  S++ I  K  +   ++V    + E   IR  I
Sbjct: 1   MARIAGVDIPDRKRGEISLTYIFGIGRSSAKKILEKAGVDLNKKVIDWTDDESGAIRGVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y+VEG L+  V ++IKRLMD+ CYRGLRHR+GLP+RGQRT  N+RTRK
Sbjct: 61  AGEYKVEGALKSEVQLSIKRLMDIACYRGLRHRKGLPLRGQRTKNNSRTRK 111


>gi|158334434|ref|YP_001515606.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017]
 gi|189040488|sp|B0C432|RS13_ACAM1 RecName: Full=30S ribosomal protein S13
 gi|158304675|gb|ABW26292.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017]
          Length = 126

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG   SQ+I     + P+ RV +L + +V  +R A+
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGLTRSQEILAATGVNPDTRVRELGDQDVAALRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
              YQVEGDLRR  +MN+KRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  -AGYQVEGDLRRWESMNVKRLMDIGSYRGRRHRAGLPVRGQ 100


>gi|221105230|ref|XP_002170878.1| PREDICTED: similar to ribosomal protein S13 [Hydra magnipapillata]
          Length = 124

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + ++  K  +  +++V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGMGRSRAIEVLEKAKVSQDKKVLDWNDDEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              +++EG+LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SS-FKIEGELRSEITLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|325479172|gb|EGC82269.1| 30S ribosomal protein S13 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 114

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y +EGDLRR V+MNI+ L ++G YRGLRH+  LPVRGQ T  NA+TRK
Sbjct: 61  -NNYNIEGDLRREVSMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNAKTRK 110


>gi|229818216|ref|ZP_04448498.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM
           20098]
 gi|229784467|gb|EEP20581.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM
           20098]
          Length = 125

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 77/111 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   ++       I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKQTLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 61  EANFKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 111


>gi|312795800|ref|YP_004028722.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454]
 gi|312167575|emb|CBW74578.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454]
          Length = 121

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I GIG   ++ IC    +   ++V +L ++++ ++R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLQAILGIGASRARLICVAAGVDTSKKVKELTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V MNIKR MD+GCY G+RHR+GLP+RGQRT TNARTRK
Sbjct: 61  AK-FVVEGDLRREVTMNIKRKMDIGCYEGVRHRKGLPMRGQRTRTNARTRK 110


>gi|33594504|ref|NP_882148.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I]
 gi|33594775|ref|NP_882418.1| 30S ribosomal protein S13 [Bordetella parapertussis 12822]
 gi|33599047|ref|NP_886607.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50]
 gi|81424286|sp|Q7VTA8|RS13_BORPE RecName: Full=30S ribosomal protein S13
 gi|81425890|sp|Q7W2D2|RS13_BORPA RecName: Full=30S ribosomal protein S13
 gi|81432513|sp|Q7WRA0|RS13_BORBR RecName: Full=30S ribosomal protein S13
 gi|33564580|emb|CAE43896.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I]
 gi|33564851|emb|CAE39795.1| 30S ribosomal protein S13 [Bordetella parapertussis]
 gi|33575093|emb|CAE30556.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50]
          Length = 121

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P  ++V  L ++E+ +IR+ I
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAAGVPVTKKVKDLTDAELERIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GV-FAVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|89891133|ref|ZP_01202641.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7]
 gi|89516777|gb|EAS19436.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7]
          Length = 124

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR   +L YI+GIG   ++ +     +  +++V +  + E+ +IR AI
Sbjct: 1   MARIAGVDIPKNKRGEVSLTYIYGIGRNRAKQVLIDTGVGLDKKVSEWNDDEIGKIRSAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GE-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|15674052|ref|NP_268227.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403]
 gi|116513029|ref|YP_811936.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris SK11]
 gi|125625117|ref|YP_001033600.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|281492734|ref|YP_003354714.1| 50S ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147]
 gi|61236823|sp|P0A4A9|RS13_LACLA RecName: Full=30S ribosomal protein S13
 gi|122939923|sp|Q02W49|RS13_LACLS RecName: Full=30S ribosomal protein S13
 gi|158706241|sp|A2RNM9|RS13_LACLM RecName: Full=30S ribosomal protein S13
 gi|12725122|gb|AAK06168.1|AE006436_17 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403]
 gi|116108683|gb|ABJ73823.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. cremoris
           SK11]
 gi|124493925|emb|CAL98920.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|281376386|gb|ADA65872.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147]
 gi|300071925|gb|ADJ61325.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           NZ9000]
 gi|326407606|gb|ADZ64677.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis CV56]
          Length = 121

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR AGV+IP  KR+V +L Y+ G+G ++S+ +     +  + R   L   +   IR+ +
Sbjct: 1   MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSDQEDAIRREL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   ++EGDLRR V++NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK   K    +
Sbjct: 61  D-GLKLEGDLRREVSLNIKRLMEIGSYRGMRHRRGLPTRGQNTKNNARTRKGPAKSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15617096|ref|NP_240309.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681848|ref|YP_002468234.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682403|ref|YP_002468787.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471553|ref|ZP_05635552.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387083|sp|P57569|RS13_BUCAI RecName: Full=30S ribosomal protein S13
 gi|254811134|sp|B8D9S5|RS13_BUCA5 RecName: Full=30S ribosomal protein S13
 gi|254811135|sp|B8D827|RS13_BUCAT RecName: Full=30S ribosomal protein S13
 gi|25294711|pir||C84988 30S ribosomal protein S13 [imported] - Buchnera sp. (strain APS)
 gi|10039161|dbj|BAB13195.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622136|gb|ACL30292.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624691|gb|ACL30846.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086224|gb|ADP66306.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086801|gb|ADP66882.1| 30S ribosomal protein S13 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087388|gb|ADP67468.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087885|gb|ADP67964.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 118

 Score =  115 bits (287), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  + AL  I+GIG K S+ IC+   IP   ++  L E ++  +R  +
Sbjct: 1   MARIAGINIPENKHTLIALTAIYGIGKKRSKFICSIANIPEHSKIVDLNEEQIDLLRTHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR   +NIKRL+DL CYRGLRHRR LPV GQRT TNART K
Sbjct: 61  AK-YVIEGDLRRERTLNIKRLIDLSCYRGLRHRRSLPVHGQRTKTNARTCK 110


>gi|256370800|ref|YP_003108625.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009592|gb|ACU52952.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 134

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 75/110 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA I+G+ IP+ KR + AL YI GIG  +S+ I N   I   ++V    ++E+ +IR+ I
Sbjct: 1   MAIISGIEIPKNKRGLIALTYIFGIGISTSKKIFNNTGIDKNKKVSNWTDNEIKKIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
               + EG+LR  + ++IKR+MD+GCYRG+RHR GLPVRGQ+T  N RTR
Sbjct: 61  SDKIKTEGELRLEIQLDIKRIMDIGCYRGIRHRLGLPVRGQKTKKNCRTR 110


>gi|34541517|ref|NP_905996.1| 30S ribosomal protein S13 [Porphyromonas gingivalis W83]
 gi|188995708|ref|YP_001929960.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277]
 gi|81416929|sp|Q7MTN7|RS13_PORGI RecName: Full=30S ribosomal protein S13
 gi|226712775|sp|B2RLW8|RS13_PORG3 RecName: Full=30S ribosomal protein S13
 gi|34397834|gb|AAQ66895.1| ribosomal protein S13 [Porphyromonas gingivalis W83]
 gi|188595388|dbj|BAG34363.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277]
          Length = 126

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 73/109 (66%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  S+  I +K  +  + +V    + +   IR  I  
Sbjct: 4   RIVGVDLPQNKRGFIALTYIYGIGRSSAITILDKAGVDRDIKVKDWSDDQAAAIRDVIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  GYKVEGDLRSEVQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112


>gi|15618538|ref|NP_224824.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae CWL029]
 gi|15836160|ref|NP_300684.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae J138]
 gi|16752412|ref|NP_444671.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae AR39]
 gi|33241985|ref|NP_876926.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
 gi|6831656|sp|Q9Z7S6|RS13_CHLPN RecName: Full=30S ribosomal protein S13
 gi|4376926|gb|AAD18767.1| S13 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|7189053|gb|AAF38002.1| ribosomal protein S13 [Chlamydophila pneumoniae AR39]
 gi|8979000|dbj|BAA98835.1| S13 ribosomal protein [Chlamydophila pneumoniae J138]
 gi|33236495|gb|AAP98583.1| ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
 gi|269302412|gb|ACZ32512.1| ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN]
          Length = 122

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S +I  KL + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGSARSDEIIKKLKLDPEARASELTEEEVGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSEYTVEGDLRRRVQSDIKRLIAIHSYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|320526892|ref|ZP_08028082.1| 30S ribosomal protein S13 [Solobacterium moorei F0204]
 gi|320132860|gb|EFW25400.1| 30S ribosomal protein S13 [Solobacterium moorei F0204]
          Length = 121

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R AGV+IPR K +  +L YI+GIG  ++++I     I    R + L E++   IR+ I
Sbjct: 1   MPRFAGVDIPRNKVIGVSLTYIYGIGPTTAKNILAACGIDENTRTNDLTEAQETAIREKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   + EGDLRR  A++IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  DA-IKTEGDLRRDRALDIKRLMEIGSYRGIRHRRGLPVRGQRTRTNARTRK 110


>gi|46446065|ref|YP_007430.1| 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627551|sp|Q6ME44|RS13_PARUW RecName: Full=30S ribosomal protein S13
 gi|46399706|emb|CAF23155.1| probable 30S ribosomal protein S13 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 122

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G++IP  KR+  +L Y++GIG   S +I  KL + P  R H+L + ++ ++   +
Sbjct: 1   MPRVIGIDIPDNKRLEISLTYLYGIGRHLSNEIIVKLGLDPNMRAHKLTQDDLARLNGLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +Y VEGDLRR V  NIKRL+ +  YRG+RHR GLPVRGQRT TN+RTRK
Sbjct: 61  TSEYMVEGDLRRQVQNNIKRLISIHSYRGMRHRLGLPVRGQRTKTNSRTRK 111


>gi|37523143|ref|NP_926520.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421]
 gi|81708852|sp|Q7NFF2|RS13_GLOVI RecName: Full=30S ribosomal protein S13
 gi|35214146|dbj|BAC91515.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421]
          Length = 127

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 70/101 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI GIG   +  I     I P  RV +L + +V  +R+ I
Sbjct: 1   MARIAGVDIPREKRVEIALTYIFGIGPSRATQILLSTGINPNLRVRELTDVQVSLLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           EQ YQVEGDLRR   +NIKRLMD+GC RG RHR GLPVRGQ
Sbjct: 61  EQKYQVEGDLRRFENINIKRLMDIGCLRGRRHRLGLPVRGQ 101


>gi|257069482|ref|YP_003155737.1| 30S ribosomal protein S13P [Brachybacterium faecium DSM 4810]
 gi|256560300|gb|ACU86147.1| SSU ribosomal protein S13P [Brachybacterium faecium DSM 4810]
          Length = 124

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      +  + RV ++ + + +++R  +
Sbjct: 1   MARLVGVDLPREKRIEVALTYIFGVGRSRALETLAATGVSGDLRVREVSDEDFVKLRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK
Sbjct: 61  EANYMVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRK 111


>gi|332042698|gb|EGI78898.1| 30S ribosomal protein S13 [Lacinutrix algicola 5H-3-7-4]
          Length = 123

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI+G+G   +Q+I     +    +V    + ++  IR+ +
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIYGVGRSRAQEILATAKVDESIKVQDWTDDQIGAIRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GT-FTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|62184756|ref|YP_219541.1| 30S ribosomal protein S13 [Chlamydophila abortus S26/3]
 gi|329942430|ref|ZP_08291240.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
 gi|81313064|sp|Q5L701|RS13_CHLAB RecName: Full=30S ribosomal protein S13
 gi|62147823|emb|CAH63569.1| putative 30s ribosomal protein s13 [Chlamydophila abortus S26/3]
 gi|313847667|emb|CBY16655.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1]
 gi|325506969|gb|ADZ18607.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC]
 gi|328815340|gb|EGF85328.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
 gi|328914304|gb|AEB55137.1| ribosomal protein S13p/S18e [Chlamydophila psittaci 6BC]
          Length = 122

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  KL + PE R  +L E E+ ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAAELTEEEIGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|229496152|ref|ZP_04389872.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406]
 gi|229316730|gb|EEN82643.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406]
          Length = 126

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 73/109 (66%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI GIG   +  I +K  I    +V    + +  QIR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIFGIGRSRAAYILDKAGIDRNIKVKDWSDDQAAQIREIIGS 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  EFKVEGDLRSEVQLNIKRLMDIGCYRGIRHRAGLPVRGQSTKNNARTRK 112


>gi|84494747|ref|ZP_00993866.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649]
 gi|84384240|gb|EAQ00120.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649]
          Length = 125

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 75/111 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G  SSQ       I P  RV  L +  ++ +R  I
Sbjct: 1   MARLQGVDLPREKRVEIALTYIFGVGRSSSQKALAATGIDPNVRVKDLTDVNLVALRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++ +VEGDLRR V  +I+R +++G Y+G RHR GLPV GQRT TNARTRK
Sbjct: 61  DENLKVEGDLRREVQADIRRKVEIGSYQGRRHRSGLPVHGQRTKTNARTRK 111


>gi|116617352|ref|YP_817723.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431318|ref|ZP_03913371.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122272447|sp|Q03ZM2|RS13_LEUMM RecName: Full=30S ribosomal protein S13
 gi|116096199|gb|ABJ61350.1| SSU ribosomal protein S13P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352911|gb|EEJ43084.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 123

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLAEAGVSEDVRVRDLTSDQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236500|gb|EEI86515.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172]
          Length = 114

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+G+G  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGVGRATANEILKNTGINPDTKMKDLTEDELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y +EGDLRR  ++NIK L + G YRGLRH+ GLPVRGQ T  NARTRK
Sbjct: 61  DH-YTIEGDLRRETSLNIKALRENGSYRGLRHKNGLPVRGQNTKNNARTRK 110


>gi|163859248|ref|YP_001633546.1| 30S ribosomal protein S13 [Bordetella petrii DSM 12804]
 gi|226712701|sp|A9IHS0|RS13_BORPD RecName: Full=30S ribosomal protein S13
 gi|163262976|emb|CAP45279.1| 30S ribosomal protein S13 [Bordetella petrii]
          Length = 121

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P  ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPLSKKVKDLTDAELERIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|323340397|ref|ZP_08080654.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644]
 gi|323092173|gb|EFZ34788.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644]
          Length = 121

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 1/109 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I  +  +  + RV  L   +  +IR A+
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGDTTAKKILAEAGVSEDVRVRDLTSDQEDKIR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
             +Y+VEGDLRR V++NIKRL ++G YRGLRHRR LP RGQ T  NART
Sbjct: 60  VDNYKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPSRGQNTKNNART 108


>gi|51209924|ref|YP_063588.1| ribosomal protein S13 [Gracilaria tenuistipitata var. liui]
 gi|68053118|sp|Q6B8X2|RR13_GRATL RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|50657678|gb|AAT79663.1| 30S ribosomal protein S13 [Gracilaria tenuistipitata var. liui]
          Length = 126

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV++P+ KR+  +L YI+GIG   + +I  +L I    +  +L + +++ IRQ +
Sbjct: 1   MTRIVGVDLPKNKRIEISLTYIYGIGKSKAIEILEQLKINRNIKTKELKDEQIVLIRQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              YQ+EGDL+R  +MNIKRLM +  YRG RH+ GLP+RGQ T TNART++   K    +
Sbjct: 61  NNSYQIEGDLKRVESMNIKRLMTISSYRGKRHQLGLPLRGQNTRTNARTKRGIKKTMAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|88608326|ref|YP_506178.1| 30S ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama]
 gi|123492152|sp|Q2GEB8|RS13_NEOSM RecName: Full=30S ribosomal protein S13
 gi|88600495|gb|ABD45963.1| ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama]
          Length = 123

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R  GVN+P  K VV AL Y++GIG  +++ IC+ LAI    ++  L + ++  I   I+ 
Sbjct: 2   RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           D   EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK
Sbjct: 62  DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRK 110


>gi|326692214|ref|ZP_08229219.1| 30S ribosomal protein S13 [Leuconostoc argentinum KCTC 3773]
          Length = 123

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q I  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLTADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKALQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|254796668|ref|YP_003081504.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois]
 gi|254589916|gb|ACT69278.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois]
          Length = 123

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 76/109 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R  GVN+P  K VV AL Y++GIG  +++ IC+ LAI    ++  L + ++  I   I+ 
Sbjct: 2   RFLGVNLPDNKAVVVALTYVYGIGLPTARKICSSLAIDGSAKLPDLGQEQLNSIMAYIKN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           D   EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK
Sbjct: 62  DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRK 110


>gi|212550429|ref|YP_002308746.1| 30S ribosomal protein S13 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226712690|sp|B6YQ63|RS13_AZOPC RecName: Full=30S ribosomal protein S13
 gi|212548667|dbj|BAG83335.1| 30S ribosomal protein S13 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 126

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG   S  I  +  I  + R+    + +V  +R+ I +
Sbjct: 4   RILGVDLPQNKRGEIALTYIYGIGCGLSSKILTEAGIDRDTRIKDWTDVQVAAVREIISR 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEGDLR  + +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  NFKVEGDLRSEIQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112


>gi|187251797|ref|YP_001876279.1| 30S ribosomal protein S13 [Elusimicrobium minutum Pei191]
 gi|226712735|sp|B2KEJ6|RS13_ELUMP RecName: Full=30S ribosomal protein S13
 gi|186971957|gb|ACC98942.1| Ribosomal protein S13 [Elusimicrobium minutum Pei191]
          Length = 124

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/113 (48%), Positives = 82/113 (72%), Gaps = 2/113 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL--AIPPERRVHQLVESEVIQIRQ 58
           MAR+AG+++P+ KR+  AL YI+GIG ++++D+  K    I P  RV  L E++   +  
Sbjct: 1   MARVAGIDLPKNKRIDVALEYIYGIGKRNAKDVIAKANGQIDPTTRVKDLTEAQANLLNT 60

Query: 59  AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++++Y+VEG+LRR ++ NI+R +D G YRG RHR+ LPVRGQRT TN+RTRK
Sbjct: 61  ILQKEYKVEGELRREISGNIQRYVDTGSYRGNRHRKRLPVRGQRTKTNSRTRK 113


>gi|71891996|ref|YP_277726.1| 30S ribosomal protein S13 [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|91207689|sp|Q493I7|RS13_BLOPB RecName: Full=30S ribosomal protein S13
 gi|71796102|gb|AAZ40853.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 121

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K  V AL  I+GIG   ++ IC    I    ++ +L E  + ++R A+
Sbjct: 1   MVRIAGVNVPDRKHAVVALMSIYGIGKSRARSICLNTGIDEHVQLCKLSEIHIDKLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNART K
Sbjct: 61  DE-YIVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTCK 110


>gi|170017921|ref|YP_001728840.1| ribosomal protein S13 [Leuconostoc citreum KM20]
 gi|226712757|sp|B1MVZ2|RS13_LEUCK RecName: Full=30S ribosomal protein S13
 gi|169804778|gb|ACA83396.1| Ribosomal protein S13 [Leuconostoc citreum KM20]
          Length = 123

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q I  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 [Bordetella avium 197N]
 gi|123515218|sp|Q2L248|RS13_BORA1 RecName: Full=30S ribosomal protein S13
 gi|115421157|emb|CAJ47641.1| 30S ribosomal protein S13 [Bordetella avium 197N]
          Length = 121

 Score =  114 bits (284), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I G+G   ++ IC    +P  ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGVGRTRARKICEAAGVPVTKKVKDLTDAELERIREHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|281357930|ref|ZP_06244415.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548]
 gi|281315588|gb|EFA99616.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548]
          Length = 131

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  KRV  +L Y++G+G   + +I  K+ I P+ +   L   ++  I + +
Sbjct: 1   MPRIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + D  VEGDLRRT+A +I+RL  + CYRG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  QDDLLVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQRTKTNARTRK 111


>gi|254509449|ref|ZP_05121527.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16]
 gi|219547622|gb|EED24669.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16]
          Length = 103

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/94 (59%), Positives = 70/94 (74%), Gaps = 1/94 (1%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  + + Y VEGDLRR V+MN
Sbjct: 3   ALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMN 61

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 62  IKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 95


>gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
 gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
          Length = 130

 Score =  113 bits (283), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 78/111 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L YI+GIG  ++ +I  K  I P++R  +L ++++  I + +
Sbjct: 1   MPRIMGVDIPTNKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVKLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y+VEGDLRR +A++++RL  + CYRG RH+  LP RGQRT TNARTRK
Sbjct: 61  DSSYEVEGDLRRQLALSVRRLQAVNCYRGRRHKHSLPCRGQRTKTNARTRK 111


>gi|317401571|gb|EFV82200.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans C54]
          Length = 121

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P +++V  L ++E+ ++R+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLSDAELERVREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|29653612|ref|NP_819304.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 493]
 gi|32363225|sp|P59753|RS13_COXBU RecName: Full=30S ribosomal protein S13
 gi|29540874|gb|AAO89818.1| SSU ribosomal protein S13P [Coxiella burnetii RSA 493]
          Length = 119

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  K    AL  I+GIG   + +IC +  I P  +V  L E+E+  +R  + 
Sbjct: 3   ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR  +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK
Sbjct: 63  K-FSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRK 111


>gi|298372564|ref|ZP_06982554.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275468|gb|EFI17019.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 126

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 75/109 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+AKR    L YI+GIG  +++ I ++  I    +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQAKRGEVGLTYIYGIGRSTARKILSEAGIDYNIKVQDWSDEQAGKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEG+LR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 64  KYRVEGELRSEVQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRK 112


>gi|284929582|ref|YP_003422104.1| 30S ribosomal protein S13P [cyanobacterium UCYN-A]
 gi|284810026|gb|ADB95723.1| SSU ribosomal protein S13P [cyanobacterium UCYN-A]
          Length = 127

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 72/101 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y+ GIG   SQ I  +  + P+ RV  L + ++  +R  I
Sbjct: 1   MARISGVDLPRDKRIEIGLTYLFGIGLSRSQKILAETGVNPDIRVRDLSDEDLTSLRVYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           ++++Q+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  DENFQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|293602601|ref|ZP_06685044.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553]
 gi|311109579|ref|YP_003982432.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8]
 gi|292818973|gb|EFF78011.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553]
 gi|310764268|gb|ADP19717.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8]
          Length = 121

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P +++V  L ++E+ ++R+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLNDAELERVREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GL-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|313887064|ref|ZP_07820763.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923475|gb|EFR34285.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176609|gb|AEE12299.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica DSM 20707]
          Length = 126

 Score =  113 bits (282), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 71/109 (65%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  S+  I +   +    +V    + +   IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQISS 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEGDLR    +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  GYKVEGDLRSETQLNIKRLMDIGCYRGIRHRLGLPLRGQSTKNNARTRK 112


>gi|154706597|ref|YP_001425160.1| 30S ribosomal protein S13 [Coxiella burnetii Dugway 5J108-111]
 gi|161349360|ref|ZP_02096744.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177']
 gi|161830195|ref|YP_001596207.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 331]
 gi|212213228|ref|YP_002304164.1| 30S ribosomal protein S13 [Coxiella burnetii CbuG_Q212]
 gi|212218096|ref|YP_002304883.1| 30S ribosomal protein S13 [Coxiella burnetii CbuK_Q154]
 gi|189040499|sp|A9KD09|RS13_COXBN RecName: Full=30S ribosomal protein S13
 gi|189040500|sp|A9NAZ2|RS13_COXBR RecName: Full=30S ribosomal protein S13
 gi|226712723|sp|B6J5F4|RS13_COXB1 RecName: Full=30S ribosomal protein S13
 gi|226712724|sp|B6J241|RS13_COXB2 RecName: Full=30S ribosomal protein S13
 gi|154355883|gb|ABS77345.1| SSU ribosomal protein S13P [Coxiella burnetii Dugway 5J108-111]
 gi|161762062|gb|ABX77704.1| ribosomal protein S13 [Coxiella burnetii RSA 331]
 gi|164601575|gb|EDQ95166.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177']
 gi|212011638|gb|ACJ19019.1| SSU ribosomal protein S13P [Coxiella burnetii CbuG_Q212]
 gi|212012358|gb|ACJ19738.1| SSU ribosomal protein S13P [Coxiella burnetii CbuK_Q154]
          Length = 119

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  K    AL  I+GIG   + +IC +  I P  +V  L E+E+  +R  + 
Sbjct: 3   ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + VEGDLRR  +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK
Sbjct: 63  K-FSVEGDLRRERSMDIKRKMDLGTYEGIRHRRGLPLRGQRTRSNARTRK 111


>gi|225630280|ref|YP_002727071.1| ribosomal protein S13 [Wolbachia sp. wRi]
 gi|225592261|gb|ACN95280.1| ribosomal protein S13 [Wolbachia sp. wRi]
          Length = 112

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 72/94 (76%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I Q+Y +EG+LR+ VAMN
Sbjct: 8   ALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFIRQNYVIEGELRKEVAMN 67

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK
Sbjct: 68  IKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRK 101


>gi|189501630|ref|YP_001957347.1| 30S ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
 gi|226712687|sp|B3EUJ9|RS13_AMOA5 RecName: Full=30S ribosomal protein S13
 gi|189497071|gb|ACE05618.1| ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
          Length = 126

 Score =  113 bits (282), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 72/111 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KR   AL YI GIG  S+  I     +  ++RV    + E   IR  I
Sbjct: 1   MARILGVDIPDNKRGEIALTYIFGIGRSSANQILAAAGVNKDKRVSSWTDEESQTIRTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y+VEG+L+  + +NIKRL+D+GCYRG RH  GLPVRGQ T  NARTRK
Sbjct: 61  NENYKVEGELKSEIRLNIKRLVDIGCYRGRRHVLGLPVRGQSTKNNARTRK 111


>gi|15837775|ref|NP_298463.1| 30S ribosomal protein S13 [Xylella fastidiosa 9a5c]
 gi|32363422|sp|Q9PE55|RS13_XYLFA RecName: Full=30S ribosomal protein S13
 gi|9106139|gb|AAF83983.1|AE003951_8 30S ribosomal protein S13 [Xylella fastidiosa 9a5c]
          Length = 118

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR V M IKRLMDL CYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRGLPLRGQRTRTNARTRK 110


>gi|28493497|ref|NP_787658.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist]
 gi|28572390|ref|NP_789170.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27]
 gi|54039357|sp|P66398|RS13_TROW8 RecName: Full=30S ribosomal protein S13
 gi|54042127|sp|P66397|RS13_TROWT RecName: Full=30S ribosomal protein S13
 gi|28410521|emb|CAD66907.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27]
 gi|28476539|gb|AAO44627.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist]
          Length = 124

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KRV   L YI GIG   S+       I  + RV  L + +++ +R  I
Sbjct: 1   MARVAGVDIPGNKRVEIGLTYICGIGPTRSRHALTAAGISFDTRVKDLTDDQLVALRAHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y++EGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K
Sbjct: 61  QNSYRIEGDLRREVASDIRRKVEIGCYQGLRHRRGLPVNGQRTRTNARSSK 111


>gi|87306333|ref|ZP_01088480.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
 gi|87290512|gb|EAQ82399.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
          Length = 123

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/106 (51%), Positives = 77/106 (72%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           GV+IP  K    +L Y++G+G ++++++C K+ I  ER+  +L E E+ +I   +E +Y 
Sbjct: 2   GVDIPNDKPTWISLTYLYGVGPRTARELCVKVGISQERKAGELHEDELSRIAGLLETEYT 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           VEG LRR +A NI+RL  + CYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 62  VEGPLRRQIAQNIQRLNRIVCYRGMRHRRGLPVRGQRTRTNARTRK 107


>gi|295698629|ref|YP_003603284.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA]
 gi|291157451|gb|ADD79896.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA]
          Length = 119

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 2/112 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+I   K +  A+  I+GIG K S+ IC +  I P  ++  L E EV ++R+ I
Sbjct: 1   MVRIAGVHISENKHIWVAIQSIYGIGKKRSRSICFRTGIEPTSKISFLSEEEVDRLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG-LPVRGQRTHTNARTRK 111
            + Y VEGDLRR   ++IKRL+DLGCYRG+RH+ G LPVRGQRT TNARTRK
Sbjct: 61  SR-YVVEGDLRREKNLSIKRLIDLGCYRGIRHKHGSLPVRGQRTKTNARTRK 111


>gi|134103234|ref|YP_001108895.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007974|ref|ZP_06565947.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
 gi|158706274|sp|A4FPJ5|RS13_SACEN RecName: Full=30S ribosomal protein S13
 gi|133915857|emb|CAM05970.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
          Length = 125

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     I  + R   L + ++ ++R+A+
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILRATDISFDVRPKDLDDDQLAKLREAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E +Y++EGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK
Sbjct: 61  E-NYRLEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRK 110


>gi|330723974|gb|AEC46344.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis MCLD]
          Length = 122

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV AL YI GIG   S++I  K  I    R   L ES++  IR+ +
Sbjct: 1   MARILNIEIPNDKRVVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +DY  EGDLRR V +NIKR++++  Y+G+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRK 110


>gi|194477037|ref|YP_002049216.1| 30S ribosomal protein S13 [Paulinella chromatophora]
 gi|171192044|gb|ACB43006.1| 30S ribosomal protein S13 [Paulinella chromatophora]
          Length = 121

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+GIG  ++Q I  K  + P+ RV  L +SEV+ +R   
Sbjct: 1   MARIAGIDIPRDKRVEIALTYIYGIGLTTAQKILAKTGVNPDTRVKDLEDSEVLSLRNTT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  ET-YTIEGDLRRQEGMALKRLQDIGCTRGRRHRMSLPVRGQ 100


>gi|15835410|ref|NP_297169.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
 gi|270285590|ref|ZP_06194984.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
 gi|270289600|ref|ZP_06195902.1| 30S ribosomal protein S13 [Chlamydia muridarum Weiss]
 gi|301336986|ref|ZP_07225188.1| 30S ribosomal protein S13 [Chlamydia muridarum MopnTet14]
 gi|14195202|sp|Q9PJN2|RS13_CHLMU RecName: Full=30S ribosomal protein S13
 gi|7190824|gb|AAF39599.1| ribosomal protein S13 [Chlamydia muridarum Nigg]
          Length = 122

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|283794916|ref|YP_003359269.1| ribosomal protein S13 [Cryptomonas paramecium]
 gi|253981888|gb|ACT46805.1| ribosomal protein S13 [Cryptomonas paramecium]
          Length = 125

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P+ KRV  AL Y++GIG  +SQ I  K  + P  R   L + +V  I++ I
Sbjct: 1   MTRIAGVDLPKNKRVEIALTYMYGIGLSTSQLILAKSNVDPNVRCRDLTDHDVSSIKETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEG ++R  +++IKRL+++ C RG RH   LPVRGQRT TNARTRK   K    +
Sbjct: 61  DKHYLVEGAIKRIESISIKRLIEINCTRGKRHTLNLPVRGQRTRTNARTRKGVKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300174008|ref|YP_003773174.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811]
 gi|299888387|emb|CBL92355.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811]
          Length = 123

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNNTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ D Q+EGDLRR V+++IK L ++  YRG+RHR+GLPV GQ T  NARTRK   K    
Sbjct: 61  DKLDLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVHGQNTKNNARTRKGPAKSIAG 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|312130525|ref|YP_003997865.1| ssu ribosomal protein s13p [Leadbetterella byssophila DSM 17132]
 gi|311907071|gb|ADQ17512.1| SSU ribosomal protein S13P [Leadbetterella byssophila DSM 17132]
          Length = 124

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 77/109 (70%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+GV+IP  KR   +L YI+GIG  +++ I ++  +  +++  +  + E   IR  I  
Sbjct: 2   RISGVDIPDKKRGEISLTYIYGIGRSTAKHILSQANVSVDKKAGEWSDDEANAIRAIISN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +++VEG LR  V ++IKRLMD+GCYRGLRHR+GLP+RGQ+T  N+RTRK
Sbjct: 62  EFKVEGALRSEVQLSIKRLMDIGCYRGLRHRKGLPLRGQKTKNNSRTRK 110


>gi|12751544|ref|NP_043597.2| ribosomal protein S13 [Odontella sinensis]
 gi|32363503|sp|P49501|RR13_ODOSI RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|13620208|emb|CAA91629.2| 30S ribosomal protein S13 [Odontella sinensis]
          Length = 123

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YIHGIG  S++ I     I PE R   L   + I +R  +
Sbjct: 1   MVRLIGVDLPRNKRIAYALTYIHGIGITSARKIIELAEISPETRTDDLTTEQTIALRDQL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  D  +EGDLR    +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ESIDLNLEGDLRCFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|256825861|ref|YP_003149821.1| 30S ribosomal protein S13P [Kytococcus sedentarius DSM 20547]
 gi|256689254|gb|ACV07056.1| SSU ribosomal protein S13P [Kytococcus sedentarius DSM 20547]
          Length = 123

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV   L YI G+G   +        I    RV  L + +++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEIGLTYIFGVGRTRALQAVEACGIDRSTRVKDLNDEQLVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E ++Q+EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  EGNFQLEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVRGQRTKTNARTRK 111


>gi|15605238|ref|NP_220024.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789246|ref|YP_328332.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/HAR-13]
 gi|237802938|ref|YP_002888132.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804860|ref|YP_002889014.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311327|ref|ZP_05353897.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276]
 gi|255317628|ref|ZP_05358874.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276s]
 gi|91207695|sp|Q3KLI8|RS13_CHLTA RecName: Full=30S ribosomal protein S13
 gi|290463296|sp|P0CE04|RS13_CHLTR RecName: Full=30S ribosomal protein S13
 gi|3328946|gb|AAC68110.1| S13 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167776|gb|AAX50784.1| SSU ribosomal protein S13P [Chlamydia trachomatis A/HAR-13]
 gi|231273160|emb|CAX10073.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274172|emb|CAX10966.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/Jali20/OT]
 gi|296436042|gb|ADH18216.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768]
 gi|296436970|gb|ADH19140.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222]
 gi|296437903|gb|ADH20064.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074]
 gi|297140403|gb|ADH97161.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301]
 gi|297748639|gb|ADI51185.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-EC]
 gi|297749519|gb|ADI52197.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-LC]
          Length = 122

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|166154724|ref|YP_001654842.1| 30S ribosomal protein S13 [Chlamydia trachomatis 434/Bu]
 gi|166155599|ref|YP_001653854.1| 30S ribosomal protein S13 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335998|ref|ZP_07224242.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2tet1]
 gi|226712714|sp|B0B883|RS13_CHLT2 RecName: Full=30S ribosomal protein S13
 gi|226712716|sp|B0BCE8|RS13_CHLTB RecName: Full=30S ribosomal protein S13
 gi|620027|gb|AAA74987.1| ribosomal protein S13 [Chlamydia trachomatis]
 gi|165930712|emb|CAP04209.1| SSU ribosomal protein S13P [Chlamydia trachomatis 434/Bu]
 gi|165931587|emb|CAP07163.1| SSU ribosomal protein S13P [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 122

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|304373167|ref|YP_003856376.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1]
 gi|304309358|gb|ADM21838.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1]
          Length = 122

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KR+V AL YI GIG   S++I  K  I    R   L ES++  IR+ +
Sbjct: 1   MARILNIEIPNDKRIVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +DY  EGDLRR V +NIKR++++  Y+G+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRK 110


>gi|162446982|ref|YP_001620114.1| 30S ribosomal protein S13 [Acholeplasma laidlawii PG-8A]
 gi|189040489|sp|A9NEF8|RS13_ACHLI RecName: Full=30S ribosomal protein S13
 gi|161985089|gb|ABX80738.1| small subunit ribosomal protein S13 [Acholeplasma laidlawii PG-8A]
          Length = 124

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L YI+GIG  ++Q++     +  + RV  L + ++  IR  +
Sbjct: 1   MARIAGVDIPTQKRVVISLQYIYGIGQTTAQEVLKNANVSEDIRVKDLNDDQLSAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +    EGDLRR   +NIKRLM++G YRG+RHR+GLPV GQ T  NARTRK
Sbjct: 61  AK-IVTEGDLRRESTLNIKRLMEIGSYRGIRHRKGLPVNGQNTRNNARTRK 110


>gi|330430074|gb|AEC21408.1| 30S ribosomal protein S13 [Pusillimonas sp. T7-7]
          Length = 121

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICESAGIELSKKVKDLTDAELERIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK
Sbjct: 61  GV-FTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRK 110


>gi|28198374|ref|NP_778688.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1]
 gi|71901053|ref|ZP_00683163.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|182681015|ref|YP_001829175.1| 30S ribosomal protein S13 [Xylella fastidiosa M23]
 gi|32363279|sp|Q87E61|RS13_XYLFT RecName: Full=30S ribosomal protein S13
 gi|226712807|sp|B2I8J0|RS13_XYLF2 RecName: Full=30S ribosomal protein S13
 gi|28056444|gb|AAO28337.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1]
 gi|71729180|gb|EAO31301.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|182631125|gb|ACB91901.1| ribosomal protein S13 [Xylella fastidiosa M23]
 gi|307579484|gb|ADN63453.1| 30S ribosomal protein S13 [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 118

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L ESE+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSESEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRK 110


>gi|29839880|ref|NP_828986.1| 30S ribosomal protein S13 [Chlamydophila caviae GPIC]
 gi|89898701|ref|YP_515811.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
 gi|32363224|sp|P59752|RS13_CHLCV RecName: Full=30S ribosomal protein S13
 gi|123482768|sp|Q252X2|RS13_CHLFF RecName: Full=30S ribosomal protein S13
 gi|29834227|gb|AAP04864.1| ribosomal protein S13 [Chlamydophila caviae GPIC]
 gi|89332073|dbj|BAE81666.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
          Length = 122

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  KL + PE R  +L E E+ ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAVELTEEEIGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSEYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|116490681|ref|YP_810225.1| 30S ribosomal protein S13 [Oenococcus oeni PSU-1]
 gi|118586178|ref|ZP_01543652.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163]
 gi|290890096|ref|ZP_06553179.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429]
 gi|122277135|sp|Q04G62|RS13_OENOB RecName: Full=30S ribosomal protein S13
 gi|116091406|gb|ABJ56560.1| SSU ribosomal protein S13P [Oenococcus oeni PSU-1]
 gi|118433386|gb|EAV40078.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163]
 gi|290480287|gb|EFD88928.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429]
          Length = 123

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 79/112 (70%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  +++ +  +  +  + RV  L   +  ++R A+
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAEKVLAEAGVSEDVRVRDLSPEDEDKVRAAV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ +  +EGDLRR V++NIK L ++  YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DKLNLTLEGDLRREVSLNIKGLQEIASYRGIRHRRGLPVRGQHTKNNARTRK 112


>gi|223936406|ref|ZP_03628318.1| ribosomal protein S13 [bacterium Ellin514]
 gi|223894924|gb|EEF61373.1| ribosomal protein S13 [bacterium Ellin514]
          Length = 131

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  KR+  +L YI+GIG  ++++I     I P  R   L E ++ QI  AI
Sbjct: 1   MARIIGVEIPGEKRIDISLRYIYGIGPVNAKEILENAKIDPSIRAKDLSEQQMSQIVHAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++  Y +EGDLRR + MN+KRL  + CYRG+RH R LPVRGQRT TNARTRK
Sbjct: 61  QEGKYVIEGDLRRELGMNLKRLQGIKCYRGVRHLRSLPVRGQRTQTNARTRK 112


>gi|255348886|ref|ZP_05380893.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70]
 gi|255503426|ref|ZP_05381816.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70s]
 gi|255507104|ref|ZP_05382743.1| 30S ribosomal protein S13 [Chlamydia trachomatis D(s)2923]
 gi|289525554|emb|CBJ15032.1| SSU ribosomal protein S13P [Chlamydia trachomatis Sweden2]
 gi|296435114|gb|ADH17292.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150]
 gi|296438834|gb|ADH20987.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023]
          Length = 122

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|241895165|ref|ZP_04782461.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313]
 gi|241871471|gb|EER75222.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313]
          Length = 121

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL Y++GIG  ++Q +  +  +  + RV  L   +   IR A+
Sbjct: 1   MARIAGVDLPRDKRIVIALTYVYGIGNSTAQKVLAEAKVSEDVRVRDLTPDQEDAIR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
               +VEGDLRR V+M+IK L ++  YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  VDGIKVEGDLRREVSMSIKALQEINSYRGIRHRKGLPVRGQHTKNNARTRK 110


>gi|160942873|ref|ZP_02090112.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445774|gb|EDP22777.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103947|emb|CBL01491.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii SL3/3]
          Length = 123

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLDEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART
Sbjct: 61  DQANILVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110


>gi|330444132|ref|YP_004377118.1| 30S ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
 gi|328807242|gb|AEB41415.1| ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
          Length = 122

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIERLNLDPEARTSELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK
Sbjct: 61  QSEYVVEGDLRRRVQSDIKRLIAIHAYRGQRHRLSLPVRGQRTKTNSRTRK 111


>gi|228470693|ref|ZP_04055544.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3]
 gi|228307550|gb|EEK16546.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3]
          Length = 126

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 71/109 (65%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR   AL YI+GIG  S+  I +   +    +V    + +   IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQISN 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y+VEGDLR    +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  GYKVEGDLRSEKQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRK 112


>gi|320103639|ref|YP_004179230.1| 30S ribosomal protein S13P [Isosphaera pallida ATCC 43644]
 gi|319750921|gb|ADV62681.1| SSU ribosomal protein S13P [Isosphaera pallida ATCC 43644]
          Length = 127

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 73/111 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K    +L YI+GIG   + ++C +L I P +R   L E E+ +I   +
Sbjct: 1   MPRLLGVDIPNDKPTQYSLRYIYGIGPTLALEVCQRLNIDPSKRARDLTEEELARIAALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +Y VEG LRR + + I RL  + CYRGLRHR+ LPVRGQRT TNARTRK
Sbjct: 61  DNEYTVEGQLRRQIQLAIGRLQAISCYRGLRHRKKLPVRGQRTRTNARTRK 111


>gi|257440243|ref|ZP_05615998.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165]
 gi|257197277|gb|EEU95561.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165]
          Length = 130

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 8   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 67

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART
Sbjct: 68  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 117


>gi|189219453|ref|YP_001940094.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4]
 gi|226712760|sp|B3DVZ3|RS13_METI4 RecName: Full=30S ribosomal protein S13
 gi|189186311|gb|ACD83496.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4]
          Length = 131

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K ++ AL  I+GIG   ++ IC +  + P+ R   L   ++ +I Q I
Sbjct: 1   MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E++ + VEGDLRR +  NIKRL  + CYRG+RH RGLPVRGQRT TNARTRK
Sbjct: 61  EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRK 112


>gi|269115049|ref|YP_003302812.1| 30S ribosomal protein S13 [Mycoplasma hominis]
 gi|268322674|emb|CAX37409.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114]
          Length = 122

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 74/111 (66%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  + IP  K+V  +L YI GIG   +++I     +  E+RV  L E E+ +IR   
Sbjct: 1   MARVLNIEIPNNKKVRISLTYIFGIGVSLAKEILKDANVDGEKRVKDLSEEELTRIRDEA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  KK-YTTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQSTKKNARTRK 110


>gi|315320584|ref|YP_004072641.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005]
 gi|283569057|gb|ADB27594.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005]
          Length = 123

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G+++P+ KR+  AL YIHGIG  S++ I     I PE R +++   + + +R  +
Sbjct: 1   MVRLLGIDLPKNKRIEYALTYIHGIGLTSAKKIVKLAEINPETRTNEITVEQSVALRNIL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  + ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ENFELKLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|313112853|ref|ZP_07798499.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624758|gb|EFQ08067.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 123

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART
Sbjct: 61  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110


>gi|296111452|ref|YP_003621834.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154]
 gi|295832984|gb|ADG40865.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154]
          Length = 123

 Score =  110 bits (276), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVRGQNTKNNARTRK 112


>gi|317968837|ref|ZP_07970227.1| 30S ribosomal protein S13 [Synechococcus sp. CB0205]
          Length = 121

 Score =  110 bits (276), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL Y++GIG  ++Q I  K  + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  Y +EGDLRR   M +KRL D+GC RG RHR GLPVRGQ
Sbjct: 61  ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRVGLPVRGQ 100


>gi|313204941|ref|YP_004043598.1| SSU ribosomal protein s13p [Paludibacter propionicigenes WB4]
 gi|312444257|gb|ADQ80613.1| SSU ribosomal protein S13P [Paludibacter propionicigenes WB4]
          Length = 126

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 72/109 (66%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV++P+ KR    L YI+GIG  S++ I     +  + +V    + +  +IR+ I  
Sbjct: 4   RIVGVDLPQNKRGEVGLTYIYGIGRSSAKKILESAGVDIDIKVKDWTDDQAAKIREIIGA 63

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++VEGDLR  V  NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK
Sbjct: 64  GFKVEGDLRSEVQTNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRK 112


>gi|88803727|ref|ZP_01119251.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P]
 gi|88780460|gb|EAR11641.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P]
          Length = 121

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   ++ +  +  +    +V +  + ++  IR+ +
Sbjct: 1   MARIAGIDIPKNKRGVIALTYIFGIGSSRAKKVLAEAKVDESIKVQEWTDDQIAAIREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  -GSFTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 110


>gi|295101436|emb|CBK98981.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii L2-6]
          Length = 123

 Score =  110 bits (275), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILAATGINPDTRVKDLTLEEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART
Sbjct: 61  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNART 110


>gi|307128726|ref|YP_003880756.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI]
 gi|306483188|gb|ADM90058.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI]
          Length = 126

 Score =  110 bits (275), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 74/111 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA I+G++IP  KR + AL YI GIG  +S+ I     I    +V    +  + QIR+ I
Sbjct: 1   MAIISGIDIPNNKRGLIALTYIFGIGLSTSKKIFKNTGIDENLKVSNWSDDNLNQIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             + ++EG+L+  + ++IKR+M++GCYRG+RHR GLPVRGQ+T  N RTRK
Sbjct: 61  SDNLKIEGELKFEIQLDIKRMMEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111


>gi|262341035|ref|YP_003283890.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272372|gb|ACY40280.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 126

 Score =  110 bits (275), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 76/110 (69%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+GV++PR+KR +  L Y++GIG   S+ I + + I   +++    + ++ ++R+ I 
Sbjct: 3   VRISGVDLPRSKRGIIGLTYLYGIGKSLSKIILHSVGIDENKKIENWSDDDISKVRKYIS 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + ++EG+LR  +  N+KRLMD+GCY G RHR+GLP+RGQ+T  N RTRK
Sbjct: 63  NNIKIEGELRSEIQFNVKRLMDIGCYVGTRHRKGLPLRGQKTKNNCRTRK 112


>gi|225860275|ref|YP_002741784.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|225727097|gb|ACO22948.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus
           pneumoniae Taiwan19F-14]
          Length = 109

 Score =  110 bits (274), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT 102


>gi|71842330|ref|YP_277418.1| ribosomal protein S13 [Emiliania huxleyi]
 gi|91207764|sp|Q4G349|RR13_EMIHU RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|60101573|gb|AAX13917.1| ribosomal protein S13 [Emiliania huxleyi]
          Length = 124

 Score =  110 bits (274), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 71/111 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+GV++PR KR+   L  I GIG  S+  I     + P+ R   L + +V  +R  I
Sbjct: 1   MVRISGVDLPRNKRIQIGLTSIFGIGNTSADKILTTANLSPDIRCSDLTDEQVSSLRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ YQ EGDLRR  ++NIKRL ++G   G RHR  LPVRGQRT TNARTRK
Sbjct: 61  DESYQTEGDLRRVYSLNIKRLTEIGSAAGRRHRVNLPVRGQRTRTNARTRK 111


>gi|225165490|ref|ZP_03727316.1| ribosomal protein S13 [Opitutaceae bacterium TAV2]
 gi|224800267|gb|EEG18671.1| ribosomal protein S13 [Opitutaceae bacterium TAV2]
          Length = 125

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K+V  +L YI+GIG   +  +  +  + P+ R   L E ++ +I Q I
Sbjct: 1   MPRLLGVDIPAKKKVSYSLRYIYGIGPVRADQVVKEAELNPDMRAQDLTEEQLNKILQVI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            E  + VEGDLRR+   ++KRL  +GCYRG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  TEHKWTVEGDLRRSHTADLKRLQAIGCYRGIRHRRSLPVRGQRTSTNARTRK 112


>gi|90994485|ref|YP_536975.1| ribosomal protein S13 [Porphyra yezoensis]
 gi|122194694|sp|Q1XDJ3|RR13_PORYE RecName: Full=30S ribosomal protein S13-2, chloroplastic
 gi|90819049|dbj|BAE92418.1| 30S ribosomal protein S13 [Porphyra yezoensis]
          Length = 126

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 75/104 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + +   L + +V+ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           E +YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT 
Sbjct: 61  ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTR 104


>gi|149001659|ref|ZP_01826632.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69]
 gi|147760117|gb|EDK67106.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69]
          Length = 109

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 72/103 (69%), Gaps = 1/103 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNT 102


>gi|318042543|ref|ZP_07974499.1| 30S ribosomal protein S13 [Synechococcus sp. CB0101]
          Length = 121

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL Y++GIG  ++Q I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDADVQKLRGAA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  Y +EGDLRR   M +KRL D+GC RG RHR GLPVRGQ
Sbjct: 61  ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRAGLPVRGQ 100


>gi|11465761|ref|NP_053905.1| ribosomal protein S13 [Porphyra purpurea]
 gi|1710693|sp|P51295|RR13_PORPU RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|1276761|gb|AAC08181.1| 30S ribosomal protein S13 [Porphyra purpurea]
          Length = 126

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 74/104 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + R   L + +++ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILKKTNIDADIRCQNLNDQQIVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           E  YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT 
Sbjct: 61  ESSYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTR 104


>gi|187734946|ref|YP_001877058.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
 gi|226712685|sp|B2UNG5|RS13_AKKM8 RecName: Full=30S ribosomal protein S13
 gi|187424998|gb|ACD04277.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
          Length = 125

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ G  IP  KR+  +L YI+GIG  +S+ I  +  I P+ R  QL + ++ +I Q I
Sbjct: 1   MARLFGTEIPNEKRIEASLPYIYGIGRSTSKRILEQAGINPDIRTGQLTDEQLTKIVQVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             D   +EGDLRR     +KRL  + CYRG RHRRGLPVRGQRT TNARTRK
Sbjct: 61  TTDGILIEGDLRREKQSILKRLTSINCYRGQRHRRGLPVRGQRTRTNARTRK 112


>gi|302850780|ref|XP_002956916.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
           nagariensis]
 gi|300257797|gb|EFJ42041.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
           nagariensis]
          Length = 137

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI  V IP +KR+  +L YI+GIG  ++Q I     +   ++ ++L E EV ++RQ +++
Sbjct: 17  RINNVEIPNSKRIEVSLQYIYGIGQTTAQTILRDTGVE-NKKTYELNEEEVNKLRQEVDK 75

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y  E DLRR V+ NIKRL D+GCYRG RH  GLPVRGQRT TNARTRK   K    +K+
Sbjct: 76  -YTTEADLRRIVSQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 134


>gi|254449327|ref|ZP_05062772.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015]
 gi|198261086|gb|EDY85386.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015]
          Length = 97

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 69/90 (76%), Gaps = 1/90 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           ++GIG   +  IC+   I P+ ++ +L + E+ ++R  + + + VEGDLRR V+MNIKRL
Sbjct: 1   MYGIGRTRAYSICDAAGIKPDAKIRELGDDEIEKLRTEVGK-FSVEGDLRREVSMNIKRL 59

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           MDLGCYRGLRHRRGLP+RGQRT TNARTRK
Sbjct: 60  MDLGCYRGLRHRRGLPLRGQRTKTNARTRK 89


>gi|168704698|ref|ZP_02736975.1| 30S ribosomal protein S13 [Gemmata obscuriglobus UQM 2246]
          Length = 127

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 5/123 (4%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K    +L YI G+G  ++ ++C KL + P+RR  +L + E+ +I   +
Sbjct: 1   MPRIQGVDIPPDKPTHISLRYIRGLGPTTALEVCEKLNLDPQRRAKELNDKEIAEIAVLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GK 115
           +++Y VEG LRR    NI RL ++ CYRG RHR+ LPVRGQR+ TNARTRK       GK
Sbjct: 61  DKEYLVEGPLRRVEGSNIARLKEIKCYRGERHRKNLPVRGQRSKTNARTRKGIRKTVAGK 120

Query: 116 GGV 118
            GV
Sbjct: 121 KGV 123


>gi|32477616|ref|NP_870610.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
 gi|81658839|sp|Q7UIC7|RS13_RHOBA RecName: Full=30S ribosomal protein S13
 gi|32448170|emb|CAD77687.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
          Length = 127

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 74/111 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K++  +L Y++G+G   ++++C KL I P      + + +V +I   +
Sbjct: 1   MPRLMGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+DY VEG LRR V  NI R+ ++  YRG+RHR  LPVRGQRT TNARTRK
Sbjct: 61  ERDYLVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRK 111


>gi|15829034|ref|NP_326394.1| 30S ribosomal protein S13 [Mycoplasma pulmonis UAB CTIP]
 gi|32363385|sp|Q98Q06|RS13_MYCPU RecName: Full=30S ribosomal protein S13
 gi|14089978|emb|CAC13736.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma pulmonis]
          Length = 132

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 78/121 (64%), Gaps = 11/121 (9%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----NKLAIPPER------RVHQLVE 50
           MARI  + IP  KRVV +L YI GIG   S++I      KLA   E+      RV  L E
Sbjct: 1   MARILNIEIPSNKRVVISLTYILGIGKSLSKEIIVKANEKLAKAKEKTFTEDSRVKDLSE 60

Query: 51  SEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
            ++  IR +  + Y  EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTR
Sbjct: 61  EQLQAIRDS-AKTYLTEGDLRREVSLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTR 119

Query: 111 K 111
           K
Sbjct: 120 K 120


>gi|254446003|ref|ZP_05059479.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
 gi|198260311|gb|EDY84619.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
          Length = 123

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 74/112 (66%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L YI+GIG   S+ I  +  I P+ R   L E ++  I   I
Sbjct: 1   MPRILGVDIPANKKLEYSLRYIYGIGPTRSKTILAQTGIDPDMRAKNLDEEQINAIMAKI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++    VEGDLRR +  N+KRL  + CYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 61  QELQLVVEGDLRRELTSNMKRLQAINCYRGLRHRRGLPVRGQRTKTNARTRK 112


>gi|47459094|ref|YP_015956.1| 30S ribosomal protein S13 [Mycoplasma mobile 163K]
 gi|81614321|sp|Q6KI31|RS13_MYCMO RecName: Full=30S ribosomal protein S13
 gi|47458423|gb|AAT27745.1| 30S ribosomal protein s13 [Mycoplasma mobile 163K]
          Length = 122

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRV+ +L Y++GIG   S+ I  +  I    RV  L E ++ +IR  I
Sbjct: 1   MARILNVEIPNNKRVIISLTYVYGIGRSLSKQILAEANIDENIRVKDLSEEDLTKIRN-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              +  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 60  ASRFTTEGDLRREIQLNIKRLMEIKSYRGIRHRKGLPVRGQVTQKNARTRK 110


>gi|71276501|ref|ZP_00652776.1| Ribosomal protein S13 [Xylella fastidiosa Dixon]
 gi|71900588|ref|ZP_00682715.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|170729721|ref|YP_001775154.1| 30S ribosomal protein S13 [Xylella fastidiosa M12]
 gi|226712808|sp|B0U5M0|RS13_XYLFM RecName: Full=30S ribosomal protein S13
 gi|71162678|gb|EAO12405.1| Ribosomal protein S13 [Xylella fastidiosa Dixon]
 gi|71729645|gb|EAO31749.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|167964514|gb|ACA11524.1| 30S ribosomal protein S13 [Xylella fastidiosa M12]
          Length = 118

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRK 110


>gi|254495364|ref|ZP_05108288.1| 30S ribosomal protein S13 [Polaribacter sp. MED152]
 gi|85819718|gb|EAQ40875.1| 30S ribosomal protein S13 [Polaribacter sp. MED152]
          Length = 121

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   ++ +  +  +    +V    + ++  IR+ +
Sbjct: 1   MARIAGIDIPKNKRGVIALTYIFGIGNSRAKKVLAEAKVDESIKVQDWTDEQIAAIREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              + +EG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  -GSFTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRK 110


>gi|91216887|ref|ZP_01253851.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755]
 gi|91185048|gb|EAS71427.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755]
          Length = 124

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   ++ +  +  +    +V    + ++ +IR  +
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGNSRAKKVLKEAGVDESIKVSDWNDDQIGKIRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++  +EG+LR  V ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  GKN-TIEGELRSQVQIHIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRK 110


>gi|145344575|ref|XP_001416805.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus
           lucimarinus CCE9901]
 gi|144577031|gb|ABO95098.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus
           lucimarinus CCE9901]
          Length = 119

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 76/110 (69%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  KR   AL Y++GIG  S++ I     +   +R+ +  E E+ Q+R+ +E
Sbjct: 1   ARVAGVEIPNNKRCETALTYVYGIGETSAKAIMAATGLE-NKRLREFSEQELTQLREEVE 59

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + YQ+EG+LRR + MNIKRL ++ C+RG  H R LPVRGQRT TNARTRK
Sbjct: 60  K-YQIEGELRRFITMNIKRLKEIQCHRGKMHIRNLPVRGQRTKTNARTRK 108


>gi|290512090|ref|ZP_06551458.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp.
           1_1_55]
 gi|289775880|gb|EFD83880.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp.
           1_1_55]
          Length = 106

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 71/99 (71%), Gaps = 1/99 (1%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72
           K  V AL  I GIG   S+ IC +  I    ++ +L E ++  +R+A+ + + VEGDLRR
Sbjct: 1   KHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAVGK-FVVEGDLRR 59

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 60  EITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 98


>gi|11466637|ref|NP_066320.1| ribosomal protein S13 [Malawimonas jakobiformis]
 gi|10178675|gb|AAG13687.1|AF295546_13 ribosomal protein S13 [Malawimonas jakobiformis]
          Length = 126

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G  I + K +  AL  I+G+G+K++  ICN + I  ++++ ++  +++  IR+ +
Sbjct: 1   MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++ GDLRR +++NIKR +D+  YRGLRH+   PVRGQRTHTNART+K
Sbjct: 61  NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111


>gi|182412029|ref|YP_001817095.1| 30S ribosomal protein S13 [Opitutus terrae PB90-1]
 gi|226712770|sp|B1ZNC6|RS13_OPITP RecName: Full=30S ribosomal protein S13
 gi|177839243|gb|ACB73495.1| ribosomal protein S13 [Opitutus terrae PB90-1]
          Length = 129

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV IP  K+V  +L YI+GIG   +  +  +  + P+ R   L E ++ +I   I
Sbjct: 1   MPRLLGVEIPAKKKVAYSLRYINGIGPTRADLLVKEAGLSPDMRAQDLTEEQLNKILHLI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            E  + +EGDLRR +A N+KRL  + CYRG+RHRRGLPVRGQRT TNARTRK
Sbjct: 61  TEHKWVLEGDLRREIAGNLKRLQAINCYRGVRHRRGLPVRGQRTSTNARTRK 112


>gi|254430942|ref|ZP_05044645.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001]
 gi|197625395|gb|EDY37954.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001]
          Length = 121

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL Y++GIG   +Q I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEIALTYVYGIGLTRAQKILAKTGVDPDTRVKDLSDADVQKLRGAA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQ
Sbjct: 61  ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQ 100


>gi|167752409|ref|ZP_02424536.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216]
 gi|167660650|gb|EDS04780.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216]
          Length = 126

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I ++  I  + +V    + +V  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILDEAGISYDLKVQDWSDEQVGAIRSKI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 61  ADMGIKVEGECRSVVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112


>gi|227502696|ref|ZP_03932745.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725]
 gi|227076426|gb|EEI14389.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725]
          Length = 108

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 68/94 (72%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG   ++++  K  I P+ R   L + +V  +R AIE  ++VEGDLRR V  +
Sbjct: 4   ALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAIEGSWKVEGDLRRQVQAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRK 97


>gi|291286336|ref|YP_003503152.1| 30S 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883496|gb|ADD67196.1| 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809]
          Length = 122

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+I   K+V   L  I+G+G  +++ I   + +   +R+  L E ++  IR+ I
Sbjct: 1   MARIAGVDIQNNKKVEVGLTNIYGVGRATARLILADINVDLSKRIGDLSEQDISAIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119
           E +  VEGDLR+  A+NIKRLM++ CYRG RH+  LP RGQ+T +NARTR+   GK G+ 
Sbjct: 61  EDNLTVEGDLRKETALNIKRLMEINCYRGSRHKMHLPCRGQKTRSNARTRRGLAGKRGIK 120

Query: 120 RK 121
           +K
Sbjct: 121 KK 122


>gi|193216737|ref|YP_001999979.1| 30S ribosomal protein S13 [Mycoplasma arthritidis 158L3-1]
 gi|226712764|sp|B3PMM3|RS13_MYCA5 RecName: Full=30S ribosomal protein S13
 gi|193002060|gb|ACF07275.1| ribosomal protein S13 [Mycoplasma arthritidis 158L3-1]
          Length = 122

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  V IP  KR V +L YI GIG   +  I     +   ++V  L E E+ +IR+  
Sbjct: 1   MARVLNVEIPNKKRAVISLTYIFGIGKTLASQILKDANVDENKKVESLSEEELTRIREEA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK
Sbjct: 61  KK-YVTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQCTQKNARTRK 110


>gi|148243236|ref|YP_001228393.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307]
 gi|158706291|sp|A5GVY1|RS13_SYNR3 RecName: Full=30S ribosomal protein S13
 gi|147851546|emb|CAK29040.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307]
          Length = 121

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  AL YI+G+G   SQ I     + P+ RV  L +++V ++R A 
Sbjct: 1   MARISGVDIPREKRVEIALTYIYGVGLTRSQKILASTGVSPDTRVKDLSDADVQKLRAAA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQ
Sbjct: 61  ET-FTLEGDLRRQEGMAMKRLQDIGCLRGRRHRMGLPVRGQ 100


>gi|118411210|ref|YP_874604.1| 30S ribosomal protein S13 [Thalassiosira pseudonana]
 gi|125987679|sp|A0T0Z2|RR13_THAPS RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|116739957|gb|ABK20827.1| 30S ribosomal protein S13 [Thalassiosira pseudonana]
          Length = 123

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G+++PR KR+  AL YIHGIG  S+Q       I  + R   +   + + +R  +
Sbjct: 1   MVRLLGIDLPRNKRIAYALTYIHGIGLTSAQKFIELAEISADTRTDDITTEQAVVLRNLL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  +  +EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ENCELNLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|159485052|ref|XP_001700563.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii]
 gi|158272203|gb|EDO98007.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii]
          Length = 164

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+  V IP +KR+  +L YI GIG  ++Q I     +   ++ ++L E E+ ++R  +E+
Sbjct: 44  RVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGVE-NKKTYELNEEEINKLRSEVEK 102

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y  E DLRR VA NIKRL D+GCYRG RH  GLPVRGQRT TNARTRK   K    +K+
Sbjct: 103 -YTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 161


>gi|297180258|gb|ADI16477.1| hypothetical protein [uncultured bacterium HF4000_05M23]
          Length = 127

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA IAGVNIP  +R+  AL  I+GIG  +S+ I   + +    RV  L + ++ ++R A+
Sbjct: 1   MAIIAGVNIPDNQRLEIALTAIYGIGRTTSKKIVGDVGMGDTTRVRDLTDEDLARVRSAV 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E+    +EGDLRR   +NI+RL D+  +RG+RHRRGLPVRGQRT TNART++
Sbjct: 61  ERTGLLIEGDLRRETQLNIRRLTDIQTFRGVRHRRGLPVRGQRTKTNARTKR 112


>gi|196228477|ref|ZP_03127344.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
 gi|196227880|gb|EDY22383.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
          Length = 128

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV IP  KR+  +L YI+GIG  +++ I  +  I P+ R   L   ++ QI QAI
Sbjct: 1   MPRLLGVEIPGDKRIEASLPYIYGIGPSTAKRILEQANINPDVRAKDLSNEQLNQIIQAI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                 +EGDLRR +  N+KRL  + CYRG+RHRR LPVRGQRT TNARTRK
Sbjct: 61  TASKLPIEGDLRRELQSNLKRLQAINCYRGIRHRRSLPVRGQRTSTNARTRK 112


>gi|87300892|ref|ZP_01083734.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701]
 gi|87284763|gb|EAQ76715.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701]
          Length = 121

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L Y++GIG   +Q I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEISLTYVYGIGLSRAQKILTKAGVNPDIRVKDLDDGDVQKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQ
Sbjct: 61  ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQ 100


>gi|91200690|emb|CAJ73741.1| strongly similar to 30S ribosomal protein S13 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 127

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 70/111 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  KR+V AL Y +GIG   S+ I  +L I    R   L E ++  +   I
Sbjct: 1   MPRIAGTDIPADKRIVVALTYFYGIGGALSKKILRELNIDENVRTKDLHEDQLSILGAHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            ++Y VEG LRR    NI RL  + CYRG+RHR GLPVRGQRT TNARTRK
Sbjct: 61  GKNYNVEGQLRRQELQNISRLRSISCYRGMRHRIGLPVRGQRTKTNARTRK 111


>gi|291514965|emb|CBK64175.1| SSU ribosomal protein S13P [Alistipes shahii WAL 8301]
          Length = 126

 Score =  107 bits (266), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I     I  + +V    + ++  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILETAGISYDLKVQDWSDDQIGAIRSTI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 61  ADLGLKVEGECRSMVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112


>gi|313158274|gb|EFR57676.1| 30S ribosomal protein S13 [Alistipes sp. HGB5]
          Length = 126

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I     I  + +V    + ++  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILEVAGISYDLKVQDWSDDQIGAIRSTI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK
Sbjct: 61  ADMGIKVEGECRSAVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRK 112


>gi|33862093|ref|NP_893654.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81575584|sp|Q7UZW4|RS13_PROMP RecName: Full=30S ribosomal protein S13
 gi|33634311|emb|CAE19996.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 121

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+G+G   S+ I +   + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYIYGVGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E D+ VEGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  E-DFTVEGDLRRKEGMAMKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|123966952|ref|YP_001012033.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515]
 gi|158706262|sp|A2BYR5|RS13_PROM5 RecName: Full=30S ribosomal protein S13
 gi|123201318|gb|ABM72926.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515]
          Length = 121

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 56/101 (55%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+GIG   S+ I +   + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYIYGIGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRVAA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E D+ VEGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  E-DFTVEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|11466521|ref|NP_044770.1| ribosomal protein S13 [Reclinomonas americana]
 gi|2258351|gb|AAD11885.1| ribosomal protein S13 [Reclinomonas americana]
          Length = 122

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 76/115 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G+NI   K++  AL  I+G+G K   ++C+ + + P+ ++  L ES++ ++   I
Sbjct: 1   MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           E+++ +E +LR+    NIKRL+D+  YRGLRH  GLPV GQRTHTNA+T+K   K
Sbjct: 61  EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115


>gi|237728633|ref|ZP_04559114.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2]
 gi|226909255|gb|EEH95173.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2]
          Length = 103

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + + + VEGDLRR V+M+
Sbjct: 3   ALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEVAK-FVVEGDLRREVSMS 61

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 62  IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95


>gi|296105006|ref|YP_003615152.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059465|gb|ADF64203.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 103

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  I+GIG   S+ I     I  + ++ +L E ++  +R  + + + VEGDLRR ++M+
Sbjct: 3   ALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMS 61

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 62  IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95


>gi|148238749|ref|YP_001224136.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803]
 gi|158706290|sp|A5GIS4|RS13_SYNPW RecName: Full=30S ribosomal protein S13
 gi|147847288|emb|CAK22839.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803]
          Length = 121

 Score =  106 bits (265), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   +Q I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGLTRAQTILSKTGVNPDTRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|281415635|ref|ZP_06247377.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
          Length = 108

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 66/94 (70%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+G+G   +++      I P  RV  L   +++Q+R  IE  Y+VEGDLRR VA +
Sbjct: 4   ALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHIEGSYKVEGDLRREVAAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++G Y GLRHRRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRK 97


>gi|255069915|ref|XP_002507039.1| ribosomal protein S13, chloroplast precursor [Micromonas sp.
           RCC299]
 gi|226522314|gb|ACO68297.1| ribosomal protein S13, chloroplast precursor [Micromonas sp.
           RCC299]
          Length = 176

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  K+   AL Y++GIG  +++ I  K  +   +RV +  E E+  +R  ++
Sbjct: 58  ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGLE-NKRVREFEEEELTILRAEVD 116

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             Y +EGDLRR   +NIKRL ++ CYRG RH RGLPVRGQRT TNARTRK
Sbjct: 117 -TYMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRK 165


>gi|327402760|ref|YP_004343598.1| 30S ribosomal protein S13P [Fluviicola taffensis DSM 16823]
 gi|327318268|gb|AEA42760.1| SSU ribosomal protein S13P [Fluviicola taffensis DSM 16823]
          Length = 124

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG  +++ +     I    +V    + ++  IR AI
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGRSTAKKVLVNNGIDENIKVQDWNDDQIALIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +  + EG LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK
Sbjct: 61  SE-IKTEGQLRSEIQLNIKRLMDIGCTRGIRHRAGLPLRGQRTKNNSRTRK 110


>gi|227505243|ref|ZP_03935292.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940]
 gi|227198142|gb|EEI78190.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940]
          Length = 108

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 68/94 (72%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG   ++++  K  I P+ R   L + ++  +R  IE  ++VEGDLRR V  +
Sbjct: 4   ALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDVIEATWKVEGDLRRQVQAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRK 97


>gi|294055199|ref|YP_003548857.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
 gi|293614532|gb|ADE54687.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
          Length = 120

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 78/119 (65%), Gaps = 5/119 (4%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L Y++GIG   ++ I  +    P+RR   L E E+ Q+   +
Sbjct: 1   MPRILGVDIPANKKLEYSLRYVYGIGPTRAKTIVAEAGFDPDRRAGDLSEEELNQLATIV 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            ++ Y VEGDLRR +  N+KRL+ +  +RG+RH RGLPVRGQRT TNARTR    KGGV
Sbjct: 61  ADKQYVVEGDLRREITANLKRLIAVRSWRGMRHARGLPVRGQRTKTNARTR----KGGV 115


>gi|27904920|ref|NP_778046.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|32363301|sp|Q89A87|RS13_BUCBP RecName: Full=30S ribosomal protein S13
 gi|27904318|gb|AAO27151.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 118

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NI   K VV AL  ++GIG   S+ IC +  I    ++  L + ++  +R  +
Sbjct: 1   MARIAGINIANHKHVVVALMDVYGIGKTRSKLICLRTNISESIKILDLTKDQLELLRCEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V ++IKRL DL CYRG RHR+ LPVRGQRT TNARTRK
Sbjct: 61  LK-FVVEGDLRREVTLSIKRLQDLNCYRGSRHRKKLPVRGQRTKTNARTRK 110


>gi|78211907|ref|YP_380686.1| 30S ribosomal protein S13 [Synechococcus sp. CC9605]
 gi|123578843|sp|Q3AMQ1|RS13_SYNSC RecName: Full=30S ribosomal protein S13
 gi|78196366|gb|ABB34131.1| ribosomal protein S13 [Synechococcus sp. CC9605]
          Length = 121

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  +L YI+G+G   SQ I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRGAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +Y VEGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  E-NYTVEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|303270835|ref|XP_003054779.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla
           CCMP1545]
 gi|226462753|gb|EEH60031.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla
           CCMP1545]
          Length = 182

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 76/110 (69%), Gaps = 1/110 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  KR   AL YI+G+G  +++ +     +   +R+ +  E E+ ++R+A++
Sbjct: 63  ARVAGVEIPNNKRAETALTYIYGVGDTTAKKVMATTGLE-NKRMREFEEDELTRLREAVD 121

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +EGDLRR  +MNIKRL ++ CYRG RH +GLP RGQR+ TNARTRK
Sbjct: 122 ELPLIEGDLRRFNSMNIKRLKEIQCYRGKRHIQGLPCRGQRSKTNARTRK 171


>gi|72382946|ref|YP_292301.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL2A]
 gi|91207715|sp|Q46IT0|RS13_PROMT RecName: Full=30S ribosomal protein S13
 gi|72002796|gb|AAZ58598.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. NATL2A]
          Length = 121

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G++IPR KRV  AL YI+GIG   +Q I  K  + P+ RV  L +S++ ++R A+
Sbjct: 1   MARISGIDIPREKRVEVALTYIYGIGLTRAQSILEKSGVNPDIRVKDLEDSDIQKLR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
            +++ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 60  TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|11467736|ref|NP_050788.1| ribosomal protein S13 [Guillardia theta]
 gi|3914830|sp|O46912|RR13_GUITH RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|3603061|gb|AAC35722.1| ribosomal protein S13 [Guillardia theta]
          Length = 122

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 72/104 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR+  AL YI+G+G  SSQ I  K  I   +R   L ++EV  IR  I
Sbjct: 1   MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCKDLDDNEVSLIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +++Y VEG  +R  +MNIKRLM++ C RG RHR GLP+RGQRT 
Sbjct: 61  DENYPVEGAAKRVESMNIKRLMEINCIRGKRHRVGLPLRGQRTR 104


>gi|260435148|ref|ZP_05789118.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109]
 gi|260413022|gb|EEX06318.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109]
          Length = 121

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  +L YI+G+G   SQ I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRNAM 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E+ Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EE-YTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|161616444|ref|YP_001590409.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365808|gb|ABX69576.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|321226469|gb|EFX51519.1| SSU ribosomal protein S13p S18e [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 103

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 1/94 (1%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  I+G+G   S+ I     I    ++ +L E ++  +R  + + + VEGDLRR ++M+
Sbjct: 3   ALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREISMS 61

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 62  IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 95


>gi|124024017|ref|YP_001018324.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303]
 gi|158706261|sp|A2CC49|RS13_PROM3 RecName: Full=30S ribosomal protein S13
 gi|123964303|gb|ABM79059.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303]
          Length = 121

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSGVNPDIRVKDLEDGDVQKLRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|327538950|gb|EGF25588.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47]
          Length = 123

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 71/106 (66%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           GV+IP  K++  +L Y++G+G   ++++C KL I P      + + +V +I   +E+DY 
Sbjct: 2   GVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLERDYL 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           VEG LRR V  NI R+ ++  YRG+RHR  LPVRGQRT TNARTRK
Sbjct: 62  VEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRK 107


>gi|33241140|ref|NP_876082.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81663961|sp|Q7V9Y3|RS13_PROMA RecName: Full=30S ribosomal protein S13
 gi|33238670|gb|AAQ00735.1| Ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 121

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG   +Q+I  K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGIDLPRDKRVEIALTYIYGIGLTRAQNILAKTGVNPDIRVKDLEDGDVQKLRAAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|312601094|gb|ADQ90349.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 168]
          Length = 137

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 12/133 (9%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------------IPPERRVHQL 48
           MAR+  V IP  KR+V ALC I GIG   + +I  K A            I  E    + 
Sbjct: 1   MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQKEKFGKKFPILTENTKVKE 60

Query: 49  VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           +  EV+Q+ + + + Y+ EGDL R V  NIKRL+++ CYRG+RHR+GLPVRGQ T  NAR
Sbjct: 61  INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120

Query: 109 TRKKFGKGGVARK 121
           TRK   K  +A+K
Sbjct: 121 TRKGPRKTIMAKK 133


>gi|325108637|ref|YP_004269705.1| 30S ribosomal protein S13P [Planctomyces brasiliensis DSM 5305]
 gi|324968905|gb|ADY59683.1| SSU ribosomal protein S13P [Planctomyces brasiliensis DSM 5305]
          Length = 128

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 5/123 (4%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K    +L Y++GIG  ++ +IC +L I P  +   + +  + Q+   +
Sbjct: 1   MPRVQGVDIPNNKAAYISLTYLYGIGRHTAIEICRRLQIEPTMKAKDIGDDTLAQLNNLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GK 115
           + DY +EG LRR    +I RL ++  YRG+RHRRGLPVRGQRT TNARTRK       GK
Sbjct: 61  DTDYVIEGQLRRQTQQHIARLREIQSYRGIRHRRGLPVRGQRTITNARTRKGVRKTVAGK 120

Query: 116 GGV 118
            GV
Sbjct: 121 KGV 123


>gi|54020093|ref|YP_115724.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 232]
 gi|71893522|ref|YP_278968.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J]
 gi|72080509|ref|YP_287567.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448]
 gi|81378720|sp|Q601J1|RS13_MYCH2 RecName: Full=30S ribosomal protein S13
 gi|123645173|sp|Q4A8J5|RS13_MYCH7 RecName: Full=30S ribosomal protein S13
 gi|123645895|sp|Q4AAG4|RS13_MYCHJ RecName: Full=30S ribosomal protein S13
 gi|53987266|gb|AAV27467.1| 30s ribosomal protein S13 [Mycoplasma hyopneumoniae 232]
 gi|71851649|gb|AAZ44257.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J]
 gi|71913633|gb|AAZ53544.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448]
          Length = 137

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 12/133 (9%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------------IPPERRVHQL 48
           MAR+  V IP  KR+V ALC I GIG   + +I  K A            I  E    + 
Sbjct: 1   MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60

Query: 49  VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           +  EV+Q+ + + + Y+ EGDL R V  NIKRL+++ CYRG+RHR+GLPVRGQ T  NAR
Sbjct: 61  INEEVLQVIRDVAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNAR 120

Query: 109 TRKKFGKGGVARK 121
           TRK   K  +A+K
Sbjct: 121 TRKGPRKTIMAKK 133


>gi|33864020|ref|NP_895580.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313]
 gi|81576938|sp|Q7V525|RS13_PROMM RecName: Full=30S ribosomal protein S13
 gi|33635604|emb|CAE21928.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313]
          Length = 121

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSDVNPDIRVKDLEDGDVQKLRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|126697067|ref|YP_001091953.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301]
 gi|157414142|ref|YP_001485008.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215]
 gi|254526937|ref|ZP_05138989.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202]
 gi|158706259|sp|A3PF27|RS13_PROM0 RecName: Full=30S ribosomal protein S13
 gi|166991601|sp|A8G741|RS13_PROM2 RecName: Full=30S ribosomal protein S13
 gi|126544110|gb|ABO18352.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301]
 gi|157388717|gb|ABV51422.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215]
 gi|221538361|gb|EEE40814.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202]
          Length = 121

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|113953764|ref|YP_729646.1| 30S ribosomal protein S13 [Synechococcus sp. CC9311]
 gi|123031877|sp|Q0ID26|RS13_SYNS3 RecName: Full=30S ribosomal protein S13
 gi|113881115|gb|ABI46073.1| ribosomal protein S13 [Synechococcus sp. CC9311]
          Length = 121

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGSTRAKTILTKAGVNPDIRVKDLEDNDVQKLRNAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|262186727|ref|YP_003275986.1| ribosomal protein S13 [Pleurozia purpurea]
 gi|237780724|gb|ACR19370.1| ribosomal protein S13 [Pleurozia purpurea]
          Length = 120

 Score =  104 bits (259), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 74/113 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   K+V  AL  I GIG K +  +C++L +    +V++L + +  QI + I
Sbjct: 1   MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDRLGLSDNIKVNKLTKYQFDQIIEII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L R +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T +K 
Sbjct: 61  SQNYLVDSELERVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTSRKL 113


>gi|159904198|ref|YP_001551542.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211]
 gi|226712777|sp|A9BCM6|RS13_PROM4 RecName: Full=30S ribosomal protein S13
 gi|159889374|gb|ABX09588.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211]
          Length = 121

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+G+G   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGIDIPREKRVEVALTYIYGVGLTRAKSILAKAGVNPDIRVKDLDDGDVQKLRTAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  ES-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|88807906|ref|ZP_01123417.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805]
 gi|88787945|gb|EAR19101.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805]
          Length = 121

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGLTRAKTILSKTGVNPDIRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|259506744|ref|ZP_05749644.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
 gi|259165685|gb|EEW50239.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
          Length = 108

 Score =  103 bits (258), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 66/94 (70%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  IE  ++VEGDLRR V  +
Sbjct: 4   ALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVIEATWKVEGDLRREVQAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRK 97


>gi|261749448|ref|YP_003257134.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497541|gb|ACX83991.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 126

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 73/110 (66%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+GV++P++KR +  L Y++GI    S+ I + + I    +V    + ++  IR+ I 
Sbjct: 3   VRISGVDLPKSKRGIIGLTYLYGISKSLSKKILSSVGIDENMKVMDWSDEKISNIRKYIS 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              ++EG+LR  + ++IKRLMD+GCYRG RHR+ LP+RGQ+T  N RTRK
Sbjct: 63  NHVKIEGELRSEIQLSIKRLMDIGCYRGTRHRKRLPLRGQKTKNNCRTRK 112


>gi|149072028|ref|YP_001293599.1| ribosomal protein S13 [Rhodomonas salina]
 gi|158706197|sp|A6MW20|RR13_RHDSA RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|134302979|gb|ABO70783.1| ribosomal protein S13 [Rhodomonas salina]
          Length = 123

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/104 (50%), Positives = 69/104 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SSQ I     +    R   L + ++ +IRQ I
Sbjct: 1   MARIAGVDLPRNKRIEIGLTYIYGIGLTSSQSILKVATVDSNIRCKDLTDEDISKIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           ++DY VEG  RR   M+IKRLM++ C +G RHR GLP+RGQRT 
Sbjct: 61  DEDYLVEGVARRIETMSIKRLMEINCVKGRRHRDGLPLRGQRTR 104


>gi|11467125|ref|NP_054426.1| ribosomal protein S13 [Marchantia polymorpha]
 gi|417736|sp|P26872|RT13_MARPO RecName: Full=Ribosomal protein S13, mitochondrial
 gi|250828|gb|AAB22420.1| ribosomal protein S13 [Marchantia polymorpha=liverwort, Peptide
           Mitochondrial, 120 aa]
 gi|786210|gb|AAC09423.1| rps13 [Marchantia polymorpha]
          Length = 120

 Score =  103 bits (257), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 75/113 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   K+V  AL  I GIG K +  +C++L +    +V++L + +  QI + I
Sbjct: 1   MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L+R +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T +K 
Sbjct: 61  SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKL 113


>gi|168005006|ref|XP_001755202.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693795|gb|EDQ80146.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 133

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 4/112 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60
           ARI GV +P  KR+  AL  IHG+G  +++ I   L I  E +V  +L E E+ +IR+ +
Sbjct: 8   ARIEGVELPNKKRIETALQSIHGVGKTTARQIL--LTIGLENKVTSELSELELTKIREEL 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             +Y +EG LRR  A+NI+RL+D+ CYRG RHR GLPVRGQRT  NARTRK+
Sbjct: 66  -SNYMIEGKLRRFNALNIQRLVDIQCYRGRRHRAGLPVRGQRTKCNARTRKR 116


>gi|78780014|ref|YP_398126.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9312]
 gi|91207714|sp|Q318K5|RS13_PROM9 RecName: Full=30S ribosomal protein S13
 gi|78713513|gb|ABB50690.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. MIT 9312]
          Length = 121

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANAGVNPDIRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|219559528|ref|ZP_03538604.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T17]
 gi|289571694|ref|ZP_06451921.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
 gi|289545448|gb|EFD49096.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
          Length = 110

 Score =  103 bits (256), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/94 (54%), Positives = 65/94 (69%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI GIG   S +I     I  + R   L E ++I +R  IE + +VEGDLRR V  +
Sbjct: 4   ALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREVQAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRK 97


>gi|87124984|ref|ZP_01080831.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917]
 gi|86167304|gb|EAQ68564.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917]
          Length = 121

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGPTRARTILSKTGVNPDIRVKDLDDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-YTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQ 100


>gi|124026688|ref|YP_001015803.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A]
 gi|158706260|sp|A2C4X9|RS13_PROM1 RecName: Full=30S ribosomal protein S13
 gi|123961756|gb|ABM76539.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A]
          Length = 121

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G++IPR KRV  AL YI+GIG   +Q I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARISGIDIPREKRVEVALTYIYGIGLTRAQAILEKSGVNPDIRVKDLDDGDIQKLR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
            +++ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 60  TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|86279737|gb|ABC94521.1| 30S ribosomal protein S13 [Hanusia phi]
          Length = 100

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 69/100 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR+  AL YI+G+G  SSQ I  K  I   +R   L ++E+  IR  I
Sbjct: 1   MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCRDLDDNEISLIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y VEG  +R  +MNIKRLM++ C RG RHR GLP+RG
Sbjct: 61  DENYPVEGAAKRIESMNIKRLMEINCIRGKRHRLGLPLRG 100


>gi|328772175|gb|EGF82214.1| hypothetical protein BATDEDRAFT_10132 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 142

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN+P  K V  AL  ++G+G K+ + IC+KL I P+ R+  L ES+V Q+ Q +
Sbjct: 1   MLYLLGVNLPDEKLVHIALTSVYGVGRKTGEQICHKLLIHPQCRLKDLPESKVTQLSQLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
                +E +LRR    NIK L+D+G YRG+RH+ GLPV GQRT +NA T K+ 
Sbjct: 61  -NTMTIEAELRRQTEENIKSLVDMGTYRGMRHKAGLPVNGQRTRSNASTAKRL 112


>gi|123969277|ref|YP_001010135.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601]
 gi|158706263|sp|A2BTB7|RS13_PROMS RecName: Full=30S ribosomal protein S13
 gi|123199387|gb|ABM71028.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601]
          Length = 121

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|86279741|gb|ABC94524.1| 30S ribosomal protein S13 [Chroomonas mesostigmatica]
          Length = 101

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG  +SQ I +K  +  + R   L +S+V+ IR+ I
Sbjct: 1   MARIAGVDLPKNKRVEIALTYIYGIGLSTSQSILSKANVSFDVRCKDLEDSDVMTIREII 60

Query: 61  EQDYQVEGDLRRTV-AMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y VEG  +R + ++NIKRLM++ C RG RHR GLP+RG
Sbjct: 61  DEEYPVEGAAKREIESLNIKRLMEVNCIRGRRHRAGLPLRG 101


>gi|282891931|ref|ZP_06300410.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498191|gb|EFB40531.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 104

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 63/93 (67%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           + YI+G+G + + +I  KL + P  R H+L E E+  I   ++  Y VEGDL+R V  NI
Sbjct: 1   MTYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQSQYVVEGDLKRQVQNNI 60

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           KRL+ +  YRG RHR GLPVRGQRT TNARTRK
Sbjct: 61  KRLISIHSYRGQRHRVGLPVRGQRTRTNARTRK 93


>gi|293977951|ref|YP_003543381.1| 30S ribosomal protein S13P [Candidatus Sulcia muelleri DMIN]
 gi|292667882|gb|ADE35517.1| SSU ribosomal protein S13P [Candidatus Sulcia muelleri DMIN]
          Length = 123

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 73/111 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA ++G+ IP  K  + AL YI GIG  +S+ I     I    +V    + ++ +IR+ I
Sbjct: 1   MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVRNWSDEDINKIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             + ++EG+LR  + ++IKR++++GCYRG+RHR GLPVRGQ+T  N RTRK
Sbjct: 61  SSNLRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111


>gi|171914056|ref|ZP_02929526.1| 30S ribosomal protein S13 [Verrucomicrobium spinosum DSM 4136]
          Length = 131

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 73/112 (65%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV IP  KR+  +L YI+GIG   ++ I  +  I P  R  +L + ++ +I + +
Sbjct: 1   MARLLGVEIPNEKRIEASLPYIYGIGPSLTRKILAETGIDPNIRAGELSDEQLAEISRIV 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             +   VEGDLRR +  ++KRL  + CYR  RHRRGLPVRGQRT TN+RTRK
Sbjct: 61  AAKGIVVEGDLRRELGAHMKRLTSINCYRATRHRRGLPVRGQRTKTNSRTRK 112


>gi|116072179|ref|ZP_01469447.1| 30S ribosomal protein S13 [Synechococcus sp. BL107]
 gi|116065802|gb|EAU71560.1| 30S ribosomal protein S13 [Synechococcus sp. BL107]
          Length = 121

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   ++ I  K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|116075746|ref|ZP_01473005.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916]
 gi|116067061|gb|EAU72816.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916]
          Length = 121

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I ++  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGPTRARTILSQTGVNPDTRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  E-GFTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|118465138|ref|YP_883536.1| 30S ribosomal protein S13 [Mycobacterium avium 104]
 gi|118166425|gb|ABK67322.1| ribosomal protein S13p/S18e [Mycobacterium avium 104]
          Length = 110

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 65/94 (69%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+G+G   S +I     I  + R   L + ++  +R  IE + +VEGDLRR V  +
Sbjct: 4   ALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYIEANLKVEGDLRREVQAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRK 97


>gi|78185543|ref|YP_377977.1| 30S ribosomal protein S13 [Synechococcus sp. CC9902]
 gi|123581060|sp|Q3AW72|RS13_SYNS9 RecName: Full=30S ribosomal protein S13
 gi|78169837|gb|ABB26934.1| SSU ribosomal protein S13P [Synechococcus sp. CC9902]
          Length = 121

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   ++ I  K  + P+ RV  L + ++ ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDIQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|330850864|ref|YP_004376614.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580]
 gi|328835684|dbj|BAK18980.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580]
          Length = 123

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 1/102 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++   L YIHGIG  S++ I     I  E RV+ L   +   +RQ +
Sbjct: 1   MVRLVGVDLPRNKKITYGLTYIHGIGLTSAKKIVELTNIDSETRVNDLTPEQAGLLRQTL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E+ D Q+EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQ
Sbjct: 61  EESDLQLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQ 102


>gi|215447798|ref|ZP_03434550.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
 gi|289759623|ref|ZP_06519001.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
 gi|289715187|gb|EFD79199.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
          Length = 100

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/100 (50%), Positives = 68/100 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRG
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRG 100


>gi|94502227|ref|ZP_01308713.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833839|ref|YP_001598035.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS]
 gi|189044303|sp|A8Z688|RS13_SULMW RecName: Full=30S ribosomal protein S13
 gi|94451198|gb|EAT14137.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206329|gb|ABS30639.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS]
          Length = 126

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 73/111 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA ++G+ IP  K  + AL YI GIG  +S+ I     I    +V    + ++ +IR+ I
Sbjct: 1   MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVINWSDEDINKIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
             + ++EG+LR  + ++IKR++++GCYRG+RHR GLPVRGQ+T  N RTRK
Sbjct: 61  SSNIRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRK 111


>gi|300782635|ref|YP_003762926.1| 30S ribosomal protein S13 [Amycolatopsis mediterranei U32]
 gi|299792149|gb|ADJ42524.1| small subunit ribosomal protein S13 [Amycolatopsis mediterranei
           U32]
          Length = 112

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 67/94 (71%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL YI+GIG   S+ +     +  + RV  L + ++ ++R  IE++++VEGDLRR V  +
Sbjct: 4   ALTYIYGIGRTRSKQLIKAAELNADTRVKDLSDDDLAKLRVYIEENFKVEGDLRREVNAD 63

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           I+R +++GCY GLR RRGLPVRGQRT TNARTRK
Sbjct: 64  IRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRK 97


>gi|242624285|ref|YP_003002203.1| 30S ribosomal protein S13 [Aureoumbra lagunensis]
 gi|239997393|gb|ACS36915.1| 30S ribosomal protein S13 [Aureoumbra lagunensis]
          Length = 116

 Score =  100 bits (250), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/101 (50%), Positives = 65/101 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P +KRV  AL  I+GIG  SS+ I     I P +R+H L + E+  +R  I
Sbjct: 1   MVRIAGVDLPNSKRVEYALTSIYGIGLTSSRSILAAANIDPNKRMHTLEDQELSVLRAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +Y+VE DLRR +  NI RL  + C RG RHR  LPVRGQ
Sbjct: 61  EDNYKVEDDLRRLIKQNIVRLSQINCVRGRRHRASLPVRGQ 101


>gi|240047281|ref|YP_002960669.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae HRC/581]
 gi|239984853|emb|CAT04843.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae]
          Length = 137

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 14/124 (11%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47
           MARI  + IP  KR+V AL  I+GIG   + +I  K               I  + +V  
Sbjct: 1   MARILNIEIPNNKRIVIALTSIYGIGRSLASEIVAKTQLVQKEKFANQYPLITEDTKVKD 60

Query: 48  LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           L E +++ I + I ++Y+ EGDLRR+V  +IKRL+++ CYRG+RHR+GLPVRGQ T  NA
Sbjct: 61  LNE-DILHIIRDIAKEYKTEGDLRRSVQTDIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119

Query: 108 RTRK 111
           RTRK
Sbjct: 120 RTRK 123


>gi|189095415|ref|YP_001936428.1| ribosomal protein S13 [Heterosigma akashiwo]
 gi|157694758|gb|ABV66034.1| 30S ribosomal protein S13 [Heterosigma akashiwo]
 gi|157777989|gb|ABV70175.1| 30S ribosomal protein S13 [Heterosigma akashiwo]
          Length = 122

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 68/101 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P  K+++ +L  ++GIG  +++ I  K  +  E R  +L +  V  IR  +
Sbjct: 1   MVRIAGVDLPSQKKILYSLTAVYGIGLHTAKKILEKAKVDSEIRTFELDDDSVGNIRSVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +Y VEGDLR+  ++NI RL+ + C+RG RHR+GLP+RGQ
Sbjct: 61  EDNYTVEGDLRKLKSLNINRLVSINCFRGKRHRQGLPLRGQ 101


>gi|260895671|ref|ZP_05904167.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466]
 gi|308089500|gb|EFO39195.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466]
          Length = 90

 Score =  100 bits (249), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 1/79 (1%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRH 92
           I  ++ I  + ++ +L E ++ Q+R  + + Y VEGDLRR V+MNIKRLMDLGCYRGLRH
Sbjct: 5   ILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMNIKRLMDLGCYRGLRH 63

Query: 93  RRGLPVRGQRTHTNARTRK 111
           RR LP+RGQRT TNARTRK
Sbjct: 64  RRSLPLRGQRTKTNARTRK 82


>gi|255022693|ref|ZP_05294679.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-208]
          Length = 111

 Score =  100 bits (248), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           L YI+GIG ++++++  +  +  + R   L E E+ +IR+ +++  +VEGDLRR V +NI
Sbjct: 9   LTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDR-IKVEGDLRREVNLNI 67

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           KRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +K+
Sbjct: 68  KRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK 111


>gi|224066873|ref|XP_002302256.1| predicted protein [Populus trichocarpa]
 gi|118488232|gb|ABK95935.1| unknown [Populus trichocarpa]
 gi|222843982|gb|EEE81529.1| predicted protein [Populus trichocarpa]
          Length = 168

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 4/111 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60
           AR+ GV IP +KRV  +L YIHGIG  +++ I + L++  E ++ + L E E+I +R  +
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSM--ENKITKDLSEEELIILRDEV 104

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 105 SK-YTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 154


>gi|33866620|ref|NP_898179.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102]
 gi|81573912|sp|Q7U4H9|RS13_SYNPX RecName: Full=30S ribosomal protein S13
 gi|33633398|emb|CAE08603.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102]
          Length = 121

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+G+G   ++ I  +  + P+ RV  L + ++ ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGVGPTRARTILAQTGVSPDIRVKDLEDGDLQKLRNAA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + D+ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQ
Sbjct: 61  D-DFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQ 100


>gi|224082224|ref|XP_002306609.1| predicted protein [Populus trichocarpa]
 gi|222856058|gb|EEE93605.1| predicted protein [Populus trichocarpa]
          Length = 168

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 4/111 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60
           AR+ GV IP +KRV  +L YIHGIG   ++ I + L +  E ++ + L E E+I +R  +
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTM--ENKITKDLSEDELITLRDEV 104

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 105 SK-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 154


>gi|229328281|ref|YP_002860257.1| ribosomal protein S13 [Megaceros aenigmaticus]
 gi|192282181|gb|ACF03810.1| ribosomal protein S13 [Nothoceros aenigmaticus]
          Length = 122

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 73/113 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N    K++  AL  I GIG K +  +C +L +    RV++L   ++ +I + I
Sbjct: 1   MSYILGTNSISNKQIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKILKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L+  +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T ++F
Sbjct: 61  SQNYLVDSELKAVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113


>gi|307069672|ref|YP_003878149.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola
           CARI]
 gi|306482932|gb|ADM89803.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola
           CARI]
          Length = 135

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 72/109 (66%), Gaps = 1/109 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG+N+P  K +  +L  I GIG   S+ IC    I   ++   L ++E+ +IR+ I
Sbjct: 2   IIRIAGINLPINKNIYISLTKIFGIGINISKKICKVNNIDINKKTKNLNDNELSKIRKEI 61

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            + Y +EG+L+R + +NIKRL+D+  YRG+RH   LPVRGQRT TNA+T
Sbjct: 62  YK-YSIEGELKREIFINIKRLIDIKSYRGIRHILKLPVRGQRTRTNAKT 109


>gi|300870625|ref|YP_003785496.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
 gi|300688324|gb|ADK30995.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
          Length = 129

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 4/121 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AI
Sbjct: 1   MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLR  +  NIKRL D+  YRG+RH + LPVRGQRT TN+R      +GG AR
Sbjct: 61  EATTKVEGDLRTELFNNIKRLKDIHSYRGMRHIKRLPVRGQRTRTNSRN----ARGGGAR 116

Query: 121 K 121
           K
Sbjct: 117 K 117


>gi|308072481|dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis]
          Length = 150

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 75/114 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G  +   ++V  AL  I GIG K +  +C +L I    +V++L + ++ QI Q I
Sbjct: 1   MSYILGARLVPNEQVRIALTKIDGIGPKKATRVCYRLGISDNIKVNELTKYQIDQIEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +KFG
Sbjct: 61  GQDHVVHWELKRGKRADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKFG 114


>gi|284794742|ref|YP_003412095.1| ribosomal protein S13 [Phaeoceros laevis]
 gi|254596062|gb|ACT75303.1| ribosomal protein S13 [Phaeoceros laevis]
          Length = 122

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 72/113 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N    K +  AL  I GIG K +  +C +L +    RV++L   ++ +I + I
Sbjct: 1   MSYILGTNSISNKLIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKIIKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L+  +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T ++F
Sbjct: 61  SQNYLVDSELKTVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113


>gi|168054032|ref|XP_001779437.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669122|gb|EDQ55715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 128

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 4/111 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60
           AR+ GV IP  KRV  AL YIHG+G  +S+ I   L +  E ++  +L E E+  +R  +
Sbjct: 6   ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQIL--LDVGLENKITKELSEEELTSLRDEV 63

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR   + IKRL D+ CYRG RH  GLP RGQ T  NARTR+
Sbjct: 64  SK-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRR 113


>gi|168054034|ref|XP_001779438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669123|gb|EDQ55716.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 141

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 4/111 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAI 60
           AR+ GV IP  KRV  AL YIHG+G  +S+ I   L +  E ++  +L E E+  +R  +
Sbjct: 19  ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQIL--LDVGLENKITKELSEEELTSLRDEV 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR   + IKRL D+ CYRG RH  GLP RGQ T  NARTR+
Sbjct: 77  SK-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRR 126


>gi|255630109|gb|ACU15408.1| unknown [Glycine max]
          Length = 162

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 6/112 (5%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIG-FKSSQDICNKLAIPPERRV-HQLVESEVIQIRQA 59
            R+ GV IP  KR+  +L YIHG+G  ++ Q +C+   I  + ++  +L E E+I +R  
Sbjct: 43  VRVGGVEIPNNKRIEYSLQYIHGVGRTRAKQILCD---IQMDNKITKELTEEELITLRDE 99

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + Y +EGDLRR  A+NIKRL D+ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 100 VSK-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLK 150


>gi|255545528|ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
 gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13, putative [Ricinus communis]
          Length = 290

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G   ++ I + L++   +   +L E E+I +R  + 
Sbjct: 169 ARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSME-NKITKELSEEELITLRDEVS 227

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 228 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 276



 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL +I GIG + +  I   L++   +R   L   E+  +R  + +
Sbjct: 37  RVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLE-NKRTKDLTGLELHTLRNEVSK 95

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y +  +L R V  +I+RL D+ CYRG  H   LP RGQ T TNARTRK
Sbjct: 96  -YLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRK 143


>gi|242620059|ref|YP_003002063.1| 30S ribosomal protein S13 [Aureococcus anophagefferens]
 gi|239997304|gb|ACS36827.1| 30S ribosomal protein S13 [Aureococcus anophagefferens]
          Length = 116

 Score = 97.1 bits (240), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 68/101 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+G+++P +KR+  AL  ++GIG  +S+ I     I P +R + L ++EV+ +R+ I
Sbjct: 1   MVRISGIDLPNSKRIEYALTSVYGIGLTTSRSILAVADIDPSKRTNVLGDTEVMALREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E++Y+VE DLRR    NI RL  + C +G RHR+ LPVRGQ
Sbjct: 61  EENYKVEEDLRRQTKQNIVRLSQINCVKGRRHRQNLPVRGQ 101


>gi|225459459|ref|XP_002285833.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302141873|emb|CBI19076.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 4/111 (3%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60
           AR+ GV IP +KRV  +L YIHGIG   S+ I   L +  E ++ + L E E+I +R  +
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGM--ENKITKDLSEEELITLRDEV 104

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + Y +EGDLRR  A+ I+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 105 SK-YMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 154


>gi|296126888|ref|YP_003634140.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
 gi|296018704|gb|ADG71941.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
          Length = 129

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 73/121 (60%), Gaps = 4/121 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AI
Sbjct: 1   MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLR  +  NIKRL D+  YRG+RH + LPV GQRT TN+R      +GG AR
Sbjct: 61  EATTKVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRN----ARGGGAR 116

Query: 121 K 121
           K
Sbjct: 117 K 117


>gi|330318670|gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
          Length = 165

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            R+ GV IP  KR+  +L YIHGIG  +S+ I   L++   +    L E E+I  R  + 
Sbjct: 44  VRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMD-NKITKDLFEEELISFRDQVS 102

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + Y VEGD RR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 103 K-YMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLK 151


>gi|162279916|ref|NP_064014.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|323435141|ref|YP_004222359.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|87248054|gb|ABD36081.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|148491419|dbj|BAA99325.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|317905591|emb|CBJ14001.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|319439874|emb|CBJ17577.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|320148028|emb|CBJ20692.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
          Length = 116

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   K+V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVDDKQVKIALTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK  K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116


>gi|91208878|ref|YP_539039.1| ribosomal protein S13 [Physcomitrella patens]
 gi|90991418|dbj|BAE93110.1| ribosomal protein S13 [Physcomitrella patens]
 gi|328775215|gb|AEB40003.1| ribosomal protein S13 [Funaria hygrometrica]
          Length = 122

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 75/112 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   ++V  AL  I G+G K +  +C++L +    +V++L + ++ +I + I
Sbjct: 1   MSYILGTNLVPNEQVEIALTRIFGLGPKKAIQVCDQLGLNDNIKVNKLTKYQIDRIIKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            Q+Y V+ +L R +  +IK+LM +GCYRG RH  GLP+RGQRTHTNA+T +K
Sbjct: 61  SQNYLVDLELARVIQRDIKQLMSIGCYRGFRHNAGLPLRGQRTHTNAKTCRK 112


>gi|313200103|ref|YP_004038761.1| 30S ribosomal protein S13 [Methylovorus sp. MP688]
 gi|312439419|gb|ADQ83525.1| ribosomal protein S13 [Methylovorus sp. MP688]
          Length = 86

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/68 (67%), Positives = 56/68 (82%), Gaps = 1/68 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           ++  L ++EV ++R  + +  +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT
Sbjct: 10  KIKDLNDAEVEKLRDEVAK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRT 68

Query: 104 HTNARTRK 111
            TNARTRK
Sbjct: 69  KTNARTRK 76


>gi|321268739|gb|ADW79188.1| ribosomal protein S13 [Cyanophora paradoxa]
          Length = 115

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 67/109 (61%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           I GV +P    V   L  I G+G   ++ ICN L I P  +V QL  +++I++ Q IE +
Sbjct: 3   ILGVFLPLDDYVFAGLQKIFGVGKFRAKKICNALLITPFYKVKQLNRNQIIRLSQYIENN 62

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           Y V  DL+  +  N K L+ +  YRG+RH   LPVRGQRTHTN++T+KK
Sbjct: 63  YNVGIDLQNQIKSNFKNLVKISSYRGIRHTLKLPVRGQRTHTNSQTKKK 111


>gi|255627531|gb|ACU14110.1| unknown [Glycine max]
          Length = 162

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 6/112 (5%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIG-FKSSQDICNKLAIPPERRV-HQLVESEVIQIRQA 59
            R+ GV IP  KR+  +L +IHG+G  ++ Q +C+   I  + ++  +L E E+I +R  
Sbjct: 43  VRVGGVEIPNNKRIEYSLQHIHGVGRTRAKQILCD---IQMDNKITKELTEEELITLRDE 99

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + + Y +EGDLRR  A+NIKRL D+ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 100 VSK-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLK 150


>gi|169635170|gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
 gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2 [Arachis diogoi]
          Length = 121

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   +++   +    L E E+I +R  + 
Sbjct: 2   ARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMD-NKVTKDLSEEELITLRDEVS 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K
Sbjct: 61  K-YVIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLK 109


>gi|295311703|ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo]
 gi|259156831|gb|ACV96692.1| ribosomal protein S13 [Cucurbita pepo]
          Length = 116

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/112 (44%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  I GIG K +  +C +L I    ++ +L +S++ QI Q I
Sbjct: 1   MPYISGARLVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R++ L CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHIVHWELKRGERADIERVISLSCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|94502651|ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|40795090|gb|AAR91134.1| ribosomal protein S13 [Zea mays]
          Length = 116

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++H+L + ++ QI Q I
Sbjct: 1   MLYISGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARK 112


>gi|321310956|ref|YP_004193285.1| 30S ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1]
 gi|319802800|emb|CBY93446.1| ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1]
          Length = 155

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 30/141 (21%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI-----------CNKLAIPPE------- 42
           M RI GV+IP  K +  AL  I+G+GF +S+ I            NKL+   +       
Sbjct: 1   MPRILGVDIPNNKTLYAALTSIYGVGFSTSRKIIQKAFFNEIKPLNKLSKKEKGELDKVL 60

Query: 43  -RRVHQLVESEVIQIRQAI-----------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90
             RV  L +  +  I Q I             ++  EGDLR+ V+ NIK L+++ CY G+
Sbjct: 61  RMRVKDLTKDNLSTISQTILNLQNNEEKYIYHEFLFEGDLRKKVSDNIKNLVEINCYVGI 120

Query: 91  RHRRGLPVRGQRTHTNARTRK 111
           RH+RGLPVRGQRT TNARTRK
Sbjct: 121 RHKRGLPVRGQRTRTNARTRK 141


>gi|302757637|ref|XP_002962242.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii]
 gi|300170901|gb|EFJ37502.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii]
          Length = 163

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G  +++ I    A+   +R   L ++E+ +IR  + 
Sbjct: 41  ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 99

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + Y +EGDLRR   + I  L+++ CYRG RH+ GLPVRGQRT  NARTR
Sbjct: 100 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 147


>gi|293453617|ref|ZP_06664036.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088]
 gi|291321743|gb|EFE61174.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088]
          Length = 85

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 58/74 (78%), Gaps = 1/74 (1%)

Query: 38  AIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLP 97
            I  + ++ +L E ++  +R  + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLP
Sbjct: 5   GIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLP 63

Query: 98  VRGQRTHTNARTRK 111
           VRGQRT TNARTRK
Sbjct: 64  VRGQRTKTNARTRK 77


>gi|302763467|ref|XP_002965155.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii]
 gi|300167388|gb|EFJ33993.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii]
          Length = 166

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G  +++ I    A+   +R   L ++E+ +IR  + 
Sbjct: 44  ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 102

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + Y +EGDLRR   + I  L+++ CYRG RH+ GLPVRGQRT  NARTR
Sbjct: 103 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 150


>gi|326625162|gb|EGE31507.1| Ribosomal protein S13 [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 85

 Score = 94.4 bits (233), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           ++ +L E ++  +R  + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT
Sbjct: 11  KISELSEEQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT 69

Query: 104 HTNARTRK 111
            TNARTRK
Sbjct: 70  KTNARTRK 77


>gi|207092547|ref|ZP_03240334.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 76

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query: 45  VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +H+L E EV  I + I+Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T 
Sbjct: 1   MHELSEDEVSSIAKKIQQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTK 60

Query: 105 TNARTRK 111
            NARTRK
Sbjct: 61  NNARTRK 67


>gi|159792882|gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]
          Length = 116

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|110225647|ref|YP_665653.1| ribosomal protein S13 [Nephroselmis olivacea]
 gi|6066162|gb|AAF03180.1|AF110138_12 ribosomal protein S13 [Nephroselmis olivacea]
          Length = 125

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  IA   + + ++V  AL  I+GIG   +  IC++L + P  ++ QL  ++V Q+   +
Sbjct: 1   MTTIANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            Q Y     L+RT+  ++ RL+ + CYRG R+ + LPVRGQRTHTNA+T +K
Sbjct: 61  SQSYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQRTHTNAKTARK 112


>gi|54606697|dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|54606741|dbj|BAD66764.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
          Length = 116

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   K+V  A   I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK  K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116


>gi|163752124|ref|ZP_02159329.1| 30S ribosomal protein S13 [Shewanella benthica KT99]
 gi|161327959|gb|EDP99134.1| 30S ribosomal protein S13 [Shewanella benthica KT99]
          Length = 71

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 48  LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           + E+++  +R+A+ + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNA
Sbjct: 1   MSEAQIDILREAVAE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNA 59

Query: 108 RTRK 111
           RTRK
Sbjct: 60  RTRK 63


>gi|215400753|ref|YP_002327514.1| ribosomal protein S13 [Vaucheria litorea]
 gi|194441203|gb|ACF70931.1| ribosomal protein S13 [Vaucheria litorea]
          Length = 126

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 71/105 (67%), Gaps = 4/105 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56
           M R+ G+++P+ K +  AL  I+GIG   +++I +K+ +      + +V  L ++ +  +
Sbjct: 1   MVRLIGIDLPKGKYINYALTSIYGIGISRAEEILSKIGLDKFSIKKLKVEDLSDTNISAL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           R+ +E +YQ+EGDLRR  ++N+KRLM++G  +G RHR GLPVRGQ
Sbjct: 61  RKILEDEYQLEGDLRRLKSLNLKRLMEIGSIKGRRHRVGLPVRGQ 105


>gi|295311659|ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
 gi|259156787|gb|ACV96649.1| ribosomal protein S13 [Citrullus lanatus]
          Length = 116

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      K+V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|11830847|emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]
          Length = 116

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|41469448|gb|AAS07249.1| putative 30S ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|108710647|gb|ABF98442.1| 30S ribosomal protein S13, putative, expressed [Oryza sativa
           Japonica Group]
 gi|164375541|gb|ABY52938.1| chloroplast 30S ribosomal protein S13 precursor [Oryza sativa
           Japonica Group]
 gi|222625639|gb|EEE59771.1| hypothetical protein OsJ_12269 [Oryza sativa Japonica Group]
          Length = 171

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y +EGDL+R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 154


>gi|316996011|dbj|BAD83467.2| ribosomal protein S13 [Nicotiana tabacum]
          Length = 116

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 72/113 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K 
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKL 113


>gi|47570247|ref|ZP_00240898.1| ribosomal protein S13p/S18e [Bacillus cereus G9241]
 gi|47553071|gb|EAL11471.1| ribosomal protein S13p/S18e [Bacillus cereus G9241]
          Length = 97

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 1/82 (1%)

Query: 30  SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89
           ++ I  +  I  E RV  L E E+ +IR  I++  +VEGDLRR V++NIKRLM++G YRG
Sbjct: 6   AEKILAEAGISEETRVRDLTEDELGRIRDIIDR-IKVEGDLRREVSLNIKRLMEIGSYRG 64

Query: 90  LRHRRGLPVRGQRTHTNARTRK 111
           LRHRRGLPVRGQ +  NARTRK
Sbjct: 65  LRHRRGLPVRGQNSKNNARTRK 86


>gi|307103900|gb|EFN52157.1| hypothetical protein CHLNCDRAFT_27099 [Chlorella variabilis]
          Length = 135

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI GV +P  K V  +L YI GIG  +++ I     +   +R   L E E+ ++R+ ++
Sbjct: 6   ARIGGVEVPNQKYVEYSLQYIFGIGHTTAKAILVTTGVE-NKRTKDLSEEELTRLREEVD 64

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + Y VEGDLRR  A+NIKRL ++GCYRG RH   LPVRGQRT  NARTRK
Sbjct: 65  R-YTVEGDLRRFNALNIKRLKEIGCYRGRRHYNNLPVRGQRTKNNARTRK 113


>gi|24636948|gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna]
          Length = 116

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|323398665|ref|YP_004222740.1| ribosomal protein S13 [Glaucocystis nostochinearum]
 gi|321401358|gb|ADW83112.1| ribosomal protein S13 [Glaucocystis nostochinearum]
          Length = 116

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 69/113 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +P +K+V  +L  I+GI  K +  IC+KL      ++ +L    ++ + Q +
Sbjct: 1   MLYILGFFLPSSKKVRYSLTSIYGINKKLTNKICSKLLFHNNLKIKELTAECILLLTQEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           ++ Y +   L+++V  NI  L+ +  YRG+RH  G PVRGQRTHTN++T+K+F
Sbjct: 61  DKHYLIGSKLKKSVFDNINCLIKINSYRGIRHSLGYPVRGQRTHTNSKTKKRF 113


>gi|218193603|gb|EEC76030.1| hypothetical protein OsI_13197 [Oryza sativa Indica Group]
          Length = 171

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y +EGDL+R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 154


>gi|22550356|ref|NP_689356.1| ribosomal protein S13 [Chaetosphaeridium globosum]
 gi|22417022|gb|AAM96621.1|AF494279_26 ribosomal protein S13 [Chaetosphaeridium globosum]
          Length = 122

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 65/96 (67%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  ++GIG   +  IC+ L + P  +V+QL   +  ++ + I  ++ +E +L+R V  +
Sbjct: 22  ALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELELKRIVQTD 81

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           I+RL+ +GCYRGLRH  GLP+RGQRTHTNA+T ++ 
Sbjct: 82  IRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRL 117


>gi|24636952|gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus]
          Length = 116

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 72/112 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  + RR    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWEWRRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|11465441|ref|NP_045168.1| ribosomal protein S13 [Cyanidium caldarium]
 gi|32363435|sp|Q9TLV0|RR13_CYACA RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|6466344|gb|AAF12926.1|AF022186_48 unknown [Cyanidium caldarium]
          Length = 122

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 65/101 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG  +P  KRV  AL YI+GIG   S+ I  +L +    RV  L+  E+  IR+ I
Sbjct: 1   MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E++Y VE DLRR   +NIKRL+++  Y+G RH+  LPVRGQ
Sbjct: 61  ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQ 101


>gi|194033240|ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|60498746|dbj|BAC19882.2| Ribosomal protein S13 [Oryza sativa Japonica Group]
          Length = 116

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 72/113 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K 
Sbjct: 61  AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARKL 113


>gi|134059|sp|P23209|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial
          Length = 116

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 72/112 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  ++GIG K +  +C +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|226500900|ref|NP_001149618.1| LOC100283244 [Zea mays]
 gi|195628536|gb|ACG36098.1| 30S ribosomal protein S13 [Zea mays]
          Length = 170

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 5/121 (4%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKXVGK 105

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK-GGVARK 121
            Y +EGDL+R   + I+RL ++ CY+G+RH+ GLPVRGQRT  N RT K  GK   VA+K
Sbjct: 106 -YMIEGDLKRFNRVAIERLKEIRCYKGIRHKLGLPVRGQRTKNNCRTLK--GKRASVAKK 162

Query: 122 R 122
           +
Sbjct: 163 K 163


>gi|18417346|ref|NP_568299.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis
           thaliana]
 gi|1173194|sp|P42732|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName:
           Full=CS13; Flags: Precursor
 gi|16767|emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana]
 gi|662869|emb|CAA88028.1| chloroplast ribosomal protein S13 [Arabidopsis thaliana]
 gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
 gi|1515107|emb|CAA60413.1| plastid ribosomal protein S13 [Arabidopsis thaliana]
 gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110 [Arabidopsis thaliana]
 gi|15450549|gb|AAK96452.1| AT5g14320/F18O22_110 [Arabidopsis thaliana]
 gi|332004633|gb|AED92016.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
          Length = 169

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +   +    + E E+I +R  + 
Sbjct: 48  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQME-NKITKDMAEEELIILRDEVS 106

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           + Y +EGDLRR  A+ IKRL ++ CYRG+RH +GLP RGQRT  N RT
Sbjct: 107 K-YMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153


>gi|116784057|gb|ABK23197.1| unknown [Picea sitchensis]
 gi|148906984|gb|ABR16636.1| unknown [Picea sitchensis]
 gi|224284072|gb|ACN39773.1| unknown [Picea sitchensis]
          Length = 169

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  K++  +L YIHGIG  +++ +   L +   +   +L ESE+ ++R  + 
Sbjct: 48  ARVGGVEIPNNKKIEYSLQYIHGIGRTTARQVLYDLGME-NKVTRELNESELTRVRDEVS 106

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + Y +EGDLRR   + I+RL+++ CYRG RH  GLP RGQRT  N RT K
Sbjct: 107 K-YMIEGDLRRFNNLAIRRLIEIQCYRGRRHVAGLPCRGQRTKNNCRTLK 155


>gi|225621049|ref|YP_002722307.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
 gi|225215869|gb|ACN84603.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
          Length = 125

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 4/116 (3%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AIE   +
Sbjct: 2   GVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATTK 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           VEGDLR  +  NIKRL D+  YRG+RH + LPV GQRT TN+R      +GG ARK
Sbjct: 62  VEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRN----ARGGGARK 113


>gi|24636950|gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata]
          Length = 116

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G ++   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGASLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|254571277|ref|XP_002492748.1| Putative mitochondrial ribosomal protein of the small subunit
           [Pichia pastoris GS115]
 gi|238032546|emb|CAY70569.1| Putative mitochondrial ribosomal protein of the small subunit
           [Pichia pastoris GS115]
          Length = 121

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +G+G +++Q +C+KL   P  R+HQL E +V+ I + +  D  +EG LR  V  NI+  
Sbjct: 24  FYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKELS-DLTIEGKLRSVVRENIQLK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y GLRH  GLPVRGQRT TNA+T KK  K
Sbjct: 83  RTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 116


>gi|150406483|ref|YP_001315132.1| ribosomal protein S13 [Chlorokybus atmophyticus]
 gi|126507720|gb|ABO15117.1| ribosomal protein S13 [Chlorokybus atmophyticus]
          Length = 121

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+    ++    K++  AL  + GIG   S  IC++L       V QL +S++ ++ + +
Sbjct: 1   MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKGGVA 119
            Q Y    +LRR ++ +IKR + +GCYRG RH   LP+RGQRTH+NART RK+  +   A
Sbjct: 61  NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRKRLNRSTYA 120

Query: 120 R 120
           R
Sbjct: 121 R 121


>gi|328353244|emb|CCA39642.1| 30S ribosomal protein S13 [Pichia pastoris CBS 7435]
          Length = 165

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +G+G +++Q +C+KL   P  R+HQL E +V+ I + +  D  +EG LR  V  NI+  
Sbjct: 68  FYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKELS-DLTIEGKLRSVVRENIQLK 126

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y GLRH  GLPVRGQRT TNA+T KK  K
Sbjct: 127 RTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 160


>gi|326522883|dbj|BAJ88487.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 4/111 (3%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAIE 61
           RI GV IP  KRV  AL  IHGIG   ++ I ++L +  E +V + L + E++ +R+ I 
Sbjct: 61  RIGGVVIPNDKRVEYALQSIHGIGRARARQILSELNL--ENKVTKDLSKEEIMALREGIA 118

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + Y +E DLRR  +  ++RL  + CYRG+RH   LPVRGQRT TN RTRK+
Sbjct: 119 K-YMIEADLRRFKSAAVERLEGIRCYRGIRHADALPVRGQRTKTNGRTRKE 168


>gi|169602162|ref|XP_001794503.1| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15]
 gi|160706096|gb|EAT89165.2| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15]
          Length = 163

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G N   A  V R+L    GIG K SQ +  K  I P  +V  L  + V+++   +
Sbjct: 1   MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             + ++E DLRR V  NI+RL D+G YRG RH  GLPVRGQRT T   T +K  KG   R
Sbjct: 61  S-NMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNKGRTRR 119

Query: 121 KR 122
            R
Sbjct: 120 PR 121


>gi|213024276|ref|ZP_03338723.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 65

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 45/48 (93%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 10  FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 57


>gi|329907621|ref|ZP_08274691.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546926|gb|EGF31835.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 69

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 44/48 (91%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK
Sbjct: 11  FVVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRK 58


>gi|282931915|ref|ZP_06337387.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|282932825|ref|ZP_06338225.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|281303054|gb|EFA95256.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|281303967|gb|EFA96097.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
          Length = 86

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRH 92
           IC    +  + R   L   +  ++R  +++ Y+VEGDLRR ++MNIKRL+D+G YRG+RH
Sbjct: 3   ICADAGVSEDIRSKDLTPEDQEKLRAEVDK-YRVEGDLRREISMNIKRLVDIGSYRGVRH 61

Query: 93  RRGLPVRGQRTHTNARTRK 111
           RRGLPVRGQ T  NARTRK
Sbjct: 62  RRGLPVRGQNTKNNARTRK 80


>gi|253807635|gb|ACT36213.1| ribosomal protein S13 [Helicosporidium sp. ex Simulium jonesi]
          Length = 127

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I  VN   +K++ +AL  I+GIG   S  IC+ L + P   +      ++  + Q I
Sbjct: 1   MTYINNVNCSNSKKLYKALTKIYGIGTHHSLQICDSLGLCPHTLLGDCSPQQISSLSQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +Y    ++RR +  N+++ + + CYRG RH +GLPVRGQRT +N +T +K  +
Sbjct: 61  TSNYDTGVEIRRNIKENVQKYIKMACYRGFRHAQGLPVRGQRTRSNHKTVRKLSR 115


>gi|19075537|ref|NP_588037.1| mitochondrial ribosomal protein subunit S37 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74654640|sp|O59772|SWS2_SCHPO RecName: Full=37S ribosomal protein subunit sws2, mitochondrial
 gi|3080512|emb|CAA18642.1| mitochondrial ribosomal protein subunit S37 (predicted)
           [Schizosaccharomyces pombe]
          Length = 151

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV +   K V  AL   +GIG   +++IC KL+     RV +L   ++  + Q +
Sbjct: 1   MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +EGDLRR    +I RL+++ CYRG+RH  GLPV GQ T TNA+T KK  K
Sbjct: 61  S-GMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNK 114


>gi|213422185|ref|ZP_03355251.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 90

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91
           + + VEGDLRR ++M+IKRLMDLGCYRGLR
Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLR 90


>gi|11497468|ref|NP_042258.1| ribosomal protein S13 [Prototheca wickerhamii]
 gi|1173316|sp|P46747|RT13_PROWI RecName: Full=Ribosomal protein S13, mitochondrial
 gi|467859|gb|AAD12646.1| ribosomal protein S13 [Prototheca wickerhamii]
          Length = 119

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 65/113 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I   ++   K++ +A   I+G+G      IC+ L + PE R+  L   +   + Q I
Sbjct: 1   MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y    D+RR    NI+RL+++  YRG RH +GLPVRGQR+H NART +K 
Sbjct: 61  TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKL 113


>gi|56791641|gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson 0301]
          Length = 107

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           +L  I+GIG K +  +C +L I    ++ +L + ++ Q+ Q I QD+ V  +L+R    +
Sbjct: 14  SLTKIYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMIGQDHVVHWELKRGERAD 73

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           I+RL+ + CYRG+RH+ GLP+RGQRTHTNART
Sbjct: 74  IERLISISCYRGIRHQDGLPLRGQRTHTNART 105


>gi|253795633|ref|YP_003038729.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739941|gb|ACT34276.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 118

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           + +P  K+V  AL  +HG+G   +  +   LA+P   R  QL   +   I + +E +  V
Sbjct: 1   MELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVV 60

Query: 67  EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           EG LR  V  +I +L  +GCYRGLRHR GLPVRGQRT TNA TRK
Sbjct: 61  EGGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105


>gi|194397653|ref|YP_002036933.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54]
 gi|194357320|gb|ACF55768.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54]
          Length = 101

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%)

Query: 27  FKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGC 86
             +S+ I     I  + RV  L   +   IR+ ++   +VEGDLRR V +NIKRLM++G 
Sbjct: 7   LATSKKILAAAGISEDVRVRDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGS 65

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRK 111
           YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 66  YRGIRHRRGLPVRGQNTKNNARTRK 90


>gi|116335040|ref|YP_802535.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV]
 gi|123025707|sp|Q05FK2|RS13_CARRP RecName: Full=30S ribosomal protein S13
 gi|116235321|dbj|BAF35169.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV]
          Length = 118

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           I GV I + K +V  L  I+GIG+  S  IC+K+     ++   L   E  +I   I + 
Sbjct: 5   ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINK- 63

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
             VE +L+  +  N K+ ++L  Y+ LRH++ LP RGQRT TNA+TRKK  
Sbjct: 64  INVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMN 114


>gi|312218573|emb|CBX98518.1| similar to 30S ribosomal protein S13 [Leptosphaeria maculans]
          Length = 125

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 4/123 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +   A  V R+L    GIG K SQ I  K  I P ++V  L  S V+++ + +
Sbjct: 1   MVFINGFSFTEATLVKRSLESFFGIGPKVSQKIMAKFYIHPWQKVGSLKNSTVLELTEEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH---TNARTRKKFGKGG 117
             + ++E DLRR V  +I+RL D+G YRG RH  GLPVRGQRT    T AR   +  +GG
Sbjct: 61  -TNMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQRTRTQITTARRLNRMERGG 119

Query: 118 VAR 120
             R
Sbjct: 120 TGR 122


>gi|325989735|ref|YP_004249434.1| 30S ribosomal protein S13 [Mycoplasma suis KI3806]
 gi|323574820|emb|CBZ40480.1| 30S ribosomal protein S13 [Mycoplasma suis]
          Length = 162

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 36/147 (24%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41
           MARI GV +P  K +  AL  I+GIG  +S+ I                    +KL +  
Sbjct: 1   MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTESEKSKLEVYM 60

Query: 42  ERRVHQLVESEVIQIRQAIE--QDYQ---------------VEGDLRRTVAMNIKRLMDL 84
           ++RV+ L   E+  + QAI   Q  Q               +EGDLR+ ++ ++  L ++
Sbjct: 61  KKRVYSLSSEELASLSQAIVKLQSIQEEIPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRK 111
             Y GLRHRR LPV GQRT TNARTRK
Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRK 147


>gi|224066875|ref|XP_002302257.1| predicted protein [Populus trichocarpa]
 gi|222843983|gb|EEE81530.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL YIHGIG K +  I  +L++   +    L   E+  +R+ + +
Sbjct: 33  RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSLV-NKPTKDLTGIELNSLREEVSK 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Y    DL R V  +++RL+D+ CYRG RH  GLP RGQRT TNARTRK+  K G
Sbjct: 92  -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145


>gi|118488715|gb|ABK96168.1| unknown [Populus trichocarpa]
          Length = 163

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL YIHGIG K +  I  +L++   +    L   E+  +R+ + +
Sbjct: 33  RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSLV-NKPTKDLTGIELNSLREEVSK 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Y    DL R V  +++RL+D+ CYRG RH  GLP RGQRT TNARTRK+  K G
Sbjct: 92  -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145


>gi|325973299|ref|YP_004250363.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois]
 gi|323651901|gb|ADX97983.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois]
          Length = 162

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 36/147 (24%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41
           MARI GV +P  K +  AL  I+GIG  +S+ I                    +KL +  
Sbjct: 1   MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTEAEKSKLEVYM 60

Query: 42  ERRVHQLVESEVIQIRQAIE--QDYQ---------------VEGDLRRTVAMNIKRLMDL 84
           ++RV+ L   E+  + QAI   Q  Q               +EGDLR+ ++ ++  L ++
Sbjct: 61  KKRVYSLSSEELASLSQAIVKLQSIQEEVPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRK 111
             Y GLRHRR LPV GQRT TNARTRK
Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRK 147


>gi|289807631|ref|ZP_06538260.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 88

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89
           + + VEGDLRR ++M+IKRLMDLGCYRG
Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRG 88


>gi|24636943|gb|AAN63484.1|AF314106_1 ribosomal protein S13 [Spiranthes spiralis]
          Length = 116

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++H+L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIHELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|269991338|emb|CAX12522.1| 30S ribosomal protein S13 [Fucus vesiculosus]
          Length = 126

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 4/105 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56
           M R  G ++   K++  AL  I+GIG   +++I     +        RV  L + E+  +
Sbjct: 1   MVRFLGRDLTNNKKIKYALTTIYGIGLSRAKEILESAGLTNIDQMGTRVKDLSDEEISNL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           R+ +E++YQ+EGDL R   +NIKRLM+ G  +G RHR GLPVRGQ
Sbjct: 61  RKVLEKNYQLEGDLVRITNLNIKRLMENGSIKGRRHRAGLPVRGQ 105


>gi|585936|sp|P38017|RS13_MYCSP RecName: Full=30S ribosomal protein S13
 gi|625803|pir||C49923 ribosomal protein S13 - Chlamydia trachomatis
 gi|385203|gb|AAA16205.1| S13 [Chlamydia muridarum]
          Length = 119

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 3/111 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  + IP  K+   +L YI GIG   ++ I     +  E+RV +L E E+ +IR   
Sbjct: 1   MARVLNIEIPNNKKARISLTYIFGIGPTIAKQILADANVDGEKRVKELTEEELTRIRDEA 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++ Y  EGDL+R + +NIKRLM++  YR +RHR+    R   T  NARTRK
Sbjct: 61  KK-YTTEGDLKREINLNIKRLMEIKSYRVIRHRKDTCKRS--TKKNARTRK 108


>gi|323649892|ref|YP_004237265.1| ribosomal protein S13 [Ricinus communis]
 gi|322394272|gb|ADW96029.1| ribosomal protein S13 [Ricinus communis]
          Length = 116

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 71/113 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ ++ Q I
Sbjct: 1   MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K 
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKL 113


>gi|319738236|emb|CBJ18012.1| ribosomal protein S13 [Ectocarpus siliculosus]
          Length = 119

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 11/116 (9%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V++L +I+G+G   S+++C K     + R      S++  ++  I
Sbjct: 1   MPYIIGTSIPEDKVLVQSLSHIYGLGSSQSKNLCKKAGFGSDSR-----GSDITFLKGKI 55

Query: 61  EQDYQ------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
            +++       +  DLRR     I+RL  +  YRGLRH++GLPVRGQRTHTNA+ R
Sbjct: 56  LENFAEATSLPLGSDLRRFQNNKIRRLCSISTYRGLRHKKGLPVRGQRTHTNAKKR 111


>gi|50305489|ref|XP_452704.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641837|emb|CAH01555.1| KLLA0C11297p [Kluyveromyces lactis]
          Length = 137

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +GIG K+++ IC+KL   P  R+HQL E +V+ I   +  +  +EGD R  V  NI   
Sbjct: 24  FYGIGLKTAEKICSKLGFYPWMRMHQLTEPQVMAITSEL-ANMTIEGDARAIVKENIALK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y G+RH  GLPVRGQRT  NA+  ++  K
Sbjct: 83  RSIGSYEGMRHALGLPVRGQRTRNNAKVARRLNK 116


>gi|324309721|gb|ADY18502.1| ribosomal protein S13 [Phaeodactylum tricornutum]
          Length = 116

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G  +P  K +  +L Y +GIG  +S  +C KL      +V  L +  + ++ + +
Sbjct: 1   MVYLFGSELPDNKSIFFSLRYAYGIGKGNSSSLCKKLGFSKNLKVRNLSKEHINKLIKIM 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           E    +V GDL+++  +  K L  +  YRGLR  +GLPVRGQRTHTNART +K
Sbjct: 61  EVLKIEVAGDLKKSKLLISKTLASIKSYRGLRKNQGLPVRGQRTHTNARTARK 113


>gi|15150734|ref|NP_150400.1| ribosomal protein S13 [Pylaiella littoralis]
 gi|15147740|emb|CAC50841.1| ribosomal protein S13 [Pylaiella littoralis]
          Length = 119

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+G+G   S  +C K     + R   +  S+   +    
Sbjct: 1   MPYIVGTSIPEDKVLVQSVGHIYGLGLTQSISLCKKAGFGSDSRGRHISFSKGKLLGNLA 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           E     +  DLRR     IKRL  L  YRG RHR+GLPVRGQRTHTNA+ R  F
Sbjct: 61  EATPLPLGADLRRFTHDKIKRLCSLSTYRGSRHRKGLPVRGQRTHTNAKKRPPF 114


>gi|224020963|ref|YP_002608196.1| ribosomal protein S13 [Carica papaya]
 gi|170522375|gb|ACB20485.1| ribosomal protein S13 [Carica papaya]
          Length = 116

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 69/113 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVANEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+R + + CYRG+RH+ G P+RGQRTHTNART +K 
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRTHTNARTCRKL 113


>gi|84508531|ref|YP_448695.1| ribosomal protein S13 [Dictyota dichotoma]
 gi|45925699|gb|AAS79080.1| ribosomal protein S13 [Dictyota dichotoma]
          Length = 115

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 21/122 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPE-----------RRVHQLV 49
           M+ I G +    K V+ +L YI GIG   S+ +CNK  I  +           R +  L+
Sbjct: 1   MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           E+   ++ Q++E+ YQ+E          I+R   + CYRGLRH+RGLPVRGQRTHTNA+ 
Sbjct: 61  EASSFRLGQSLEK-YQIE---------RIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKR 110

Query: 110 RK 111
           R 
Sbjct: 111 RS 112


>gi|57013930|ref|YP_173403.1| ribosomal protein S13 [Nicotiana tabacum]
 gi|134063|sp|P05488|RT13_TOBAC RecName: Full=Ribosomal protein S13, mitochondrial
 gi|13150|emb|CAA27645.1| unnamed protein product [Nicotiana tabacum]
          Length = 116

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 69/113 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARLVGDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K 
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTCRKL 113


>gi|269101038|ref|YP_003289186.1| 30S ribosomal protein S13 [Ectocarpus siliculosus]
 gi|266631546|emb|CAV31217.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus]
 gi|270118676|emb|CAT18738.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus]
          Length = 126

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 4/105 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPER----RVHQLVESEVIQI 56
           M R  G ++   K++  AL  I+GIG   +++I  K  +        R   L + ++  +
Sbjct: 1   MVRFLGRDLANNKKIKYALTAIYGIGLSRAKEILEKAGLENVDKEGVRTKDLSDEDISNL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           R+ +E+DYQ+E DL R   +NIKRLM+ G  +G RHR GLPVRGQ
Sbjct: 61  RKVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQ 105


>gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus carota]
          Length = 116

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      K+V  A   ++GIG K +  +  +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|32363341|sp|Q8LPW2|RT13_SOYBN RecName: Full=Small ribosomal subunit protein S13, mitochondrial;
           Flags: Precursor
 gi|20977547|gb|AAK94674.1| ribosomal protein S13 [Glycine max]
          Length = 148

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 9   IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           IP  KR+V AL  +HGIG   +Q I  +L +   + V  L + E+  IR+ + + Y +  
Sbjct: 39  IPDNKRLVYALQNLHGIGRSKAQHIVAELGVE-NKFVKDLSKRELYSIRELLSK-YLIGN 96

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DL++ V  ++ RL+ + CYRG+RH   LP RGQRTHTNARTR+
Sbjct: 97  DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRR 139


>gi|84394568|ref|ZP_00993272.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01]
 gi|84374788|gb|EAP91731.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01]
          Length = 82

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1  MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83
           + Y VEGDLRR V+MNIKRLMD
Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMD 82


>gi|139438875|ref|ZP_01772335.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC
           25986]
 gi|133775586|gb|EBA39406.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC
           25986]
          Length = 59

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/46 (82%), Positives = 41/46 (89%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           VEGDLRR    N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK
Sbjct: 2   VEGDLRRERNQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRK 47


>gi|213612393|ref|ZP_03370219.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 51

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/43 (88%), Positives = 41/43 (95%)

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 1   DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 43


>gi|320592066|gb|EFX04505.1| 40S ribosomal protein s13 [Grosmannia clavigera kw1407]
          Length = 118

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + IG ++S  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVFILGVNFNELKLVKKALESFYAIGPQTSARILAKFSIHPRAKMGTLPPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  VE D RR V  NIKRL D+G YRG RH  GLPVRGQRT T   T +K  K
Sbjct: 61  S-NMTVENDARRVVQDNIKRLRDMGTYRGKRHAMGLPVRGQRTRTQILTARKLNK 114


>gi|255632414|gb|ACU16557.1| unknown [Glycine max]
          Length = 148

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)

Query: 9   IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           IP  KR+V AL  +HGIG   +Q I  +L +   + V  L + E+  IR+ + + Y +  
Sbjct: 39  IPDNKRLVYALQNLHGIGRSKAQHIVAELGVE-NKFVKDLSKRELHSIRELLSK-YLIGN 96

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           DL++ V  ++ RL+ + CYRG+RH   LP RGQRTHTNARTR+
Sbjct: 97  DLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRR 139


>gi|16215380|emb|CAC80432.1| ribosomal protein S13 [Helianthus annuus]
          Length = 116

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARSVADEQVRIASTKIDGIGPKKAILVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTSRK 112


>gi|11276604|pir||T48605 ribosomal protein S13-like protein F18O22.110 [imported] -
           Arabidopsis thaliana
 gi|7573457|emb|CAB87771.1| ribosomal protein precursor-like [Arabidopsis thaliana]
          Length = 197

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 17/123 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +   +    + E E+I +R  + 
Sbjct: 61  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQME-NKITKDMAEEELIILRDEVS 119

Query: 62  QDYQVEGDL---------------RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTN 106
           + Y +EGDL               RR  A+ IKRL ++ CYRG+RH +GLP RGQRT  N
Sbjct: 120 K-YMIEGDLAFVNELLICVVDVVQRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNN 178

Query: 107 ART 109
            RT
Sbjct: 179 CRT 181


>gi|50291021|ref|XP_447943.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527254|emb|CAG60894.1| unnamed protein product [Candida glabrata]
          Length = 126

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 3/110 (2%)

Query: 11  RAKRVVR-ALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           + K V+R AL    +G+G  +++ +C+KL   P  R+HQL E +++ I   +  +  +EG
Sbjct: 11  KGKEVIRIALASKFYGVGKSTAERLCSKLGFYPWMRMHQLSEPQILNITSELS-NMTIEG 69

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           D R  V  NI     +G Y G+RH  GLPVRGQRT  NA+T +K  + GV
Sbjct: 70  DARAIVRENIALKKKIGSYEGMRHALGLPVRGQRTRNNAKTARKINRIGV 119


>gi|317038077|ref|XP_001401569.2| 40S ribosomal protein S13 [Aspergillus niger CBS 513.88]
          Length = 119

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D ++E DLRR    NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 61  S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 114


>gi|260945795|ref|XP_002617195.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849049|gb|EEQ38513.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 121

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G+ ++Q IC K+ I P  R++QL E +++ I + +  D  +EG L++ +  NI++ 
Sbjct: 24  IFGVGYTTAQQICAKVGIYPRMRMNQLTEPQIMAINKELS-DLTIEGHLKQRILENIQQK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            ++G Y G RH  GLPVRGQRT  NA T K+  +
Sbjct: 83  KEIGSYAGNRHAAGLPVRGQRTRNNASTAKRLNR 116


>gi|32363483|sp|P08977|RT13_MAIZE RecName: Full=Ribosomal protein S13, mitochondrial
 gi|897624|gb|AAA70274.1| S13 homologous protein; putative [Zea mays]
 gi|102579650|gb|ABF70930.1| ribosomal protein S13 [Zea mays subsp. mays]
          Length = 129

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++H+L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKG 116
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART RK+  KG
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKQIRKG 117


>gi|24636941|gb|AAN63483.1|AF314105_1 ribosomal protein S13 [Serapias vomeracea]
          Length = 116

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989797|emb|CAD91291.1| mitochondrial ribosomal protein RPS13 [Neuwiedia veratrifolia]
          Length = 116

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGHKKAMKVRYRLGISGNIKMNELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|33322096|gb|AAQ06768.1|AF496109_3 30s ribosomal protein S13 [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 82

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAGV++PR KRVV AL YI+GIG  ++++IC    +  + R   L   +  ++R  +
Sbjct: 1  MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83
          ++ Y+VEGDLRR V+MNIKRL+D
Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVD 82


>gi|21450006|ref|NP_659268.1| ribosomal protein S13 [Laminaria digitata]
 gi|21425331|emb|CAC87964.1| ribosomal protein S13 [Laminaria digitata]
          Length = 119

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+GIG   S+ +C K     + R   +  ++   +    
Sbjct: 1   MPFIIGTSIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFAKGKNLENLA 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVISTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|86279745|gb|ABC94527.1| 30S ribosomal protein S13 [Cryptomonas tetrapyrenoidosa]
          Length = 81

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 55/81 (67%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAGV++PR KR+   L YI+GIG  SSQ+I  K  +  + R   L + ++  IR+ I
Sbjct: 1  MARIAGVDLPRNKRIEIGLTYIYGIGLSSSQNILTKAQVNSDIRCKDLTDQDISIIREII 60

Query: 61 EQDYQVEGDLRRTVAMNIKRL 81
          +++YQVEG  RR  ++NIKRL
Sbjct: 61 DKEYQVEGAARRVESLNIKRL 81


>gi|166895633|ref|YP_001661427.1| ribosomal protein S13 [Cycas taitungensis]
 gi|166706965|dbj|BAF98429.1| ribosomal protein S13 [Cycas taitungensis]
          Length = 150

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 69/114 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G      ++V  A   I GIG K +  +  +L I    +V++  + ++ QI Q I
Sbjct: 1   MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            QD+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +KFG
Sbjct: 61  GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRKFG 114


>gi|114151585|ref|YP_740351.1| ribosomal protein S13 [Zea perennis]
 gi|114151617|ref|YP_740439.1| ribosomal protein S13 [Zea luxurians]
 gi|114151651|ref|YP_740416.1| ribosomal protein S13 [Zea mays subsp. parviglumis]
 gi|115278553|ref|YP_762332.1| ribosomal protein S13 [Sorghum bicolor]
 gi|115278623|ref|YP_762484.1| ribosomal protein S13 [Tripsacum dactyloides]
 gi|55851987|gb|AAV67796.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116057|gb|ABE98690.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116102|gb|ABE98734.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116150|gb|ABE98781.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|102567919|gb|ABF70836.1| ribosomal protein S13 [Zea perennis]
 gi|102567984|gb|ABF70868.1| ribosomal protein S13 [Zea mays subsp. parviglumis]
 gi|110287613|gb|ABG65659.1| ribosomal protein S13 [Zea luxurians]
 gi|114309674|gb|ABI60891.1| ribosomal protein S13 [Sorghum bicolor]
 gi|114432114|gb|ABI74663.1| ribosomal protein S13 [Tripsacum dactyloides]
          Length = 116

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++H+L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|126134141|ref|XP_001383595.1| hypothetical protein PICST_57353 [Scheffersomyces stipitis CBS
           6054]
 gi|126095744|gb|ABN65566.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 122

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG+++++ IC K+ I P+ R++QL E +++ + + I  D  VEG L++ +  +I+  
Sbjct: 24  IFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEIS-DLLVEGHLKQKINNDIRMK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            D+G Y G RH +GLPVRGQ T  NA T  K  K
Sbjct: 83  RDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNK 116


>gi|189193877|ref|XP_001933277.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978841|gb|EDU45467.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 125

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +   A  V R+L    GIG   SQ I  K  I P  +V  L  S ++ +   +
Sbjct: 1   MVFINGFSFTEATLVKRSLESFFGIGPSVSQRIMAKFYIHPWAKVGSLKNSTLLDLSAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK---GG 117
             + ++E DLRR V  +I+RL D+G YRG RH  GLPVRGQ+T T   T ++  K   GG
Sbjct: 61  T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQKTRTQITTARRLNKVERGG 119

Query: 118 VAR 120
             R
Sbjct: 120 TGR 122


>gi|310792538|gb|EFQ28065.1| 30S ribosomal protein S13 [Glomerella graminicola M1.001]
          Length = 119

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL     +G  +SQ I  K +I P  +V  L    V  +   +
Sbjct: 1   MVFILGVNFSEQKLVKKALESFFALGPTASQRILAKYSIHPMAKVGTLAPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +  +E D R+ +  N+ RL D+G YRG RH  GLPVRGQRT T   T KK  + 
Sbjct: 61  S-NMTIENDARKVIQQNVMRLKDMGSYRGRRHAMGLPVRGQRTRTQIETAKKLNRA 115


>gi|317146135|ref|XP_003189773.1| 40S ribosomal protein S13 [Aspergillus oryzae RIB40]
          Length = 137

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  +V +L   +V+ I  A+
Sbjct: 19  MVFILGVNFPERNLVKKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAAL 78

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DLRR    +IKRL + G YRG RH  GLPVRGQRT T  +T  K  +
Sbjct: 79  S-EMKIENDLRRQYLDDIKRLKETGTYRGRRHALGLPVRGQRTRTQIKTAVKLNR 132


>gi|268053547|ref|YP_003288906.1| ribosomal protein S13 [Saccharina japonica]
 gi|268053586|ref|YP_003288944.1| ribosomal protein S13 [Saccharina religiosa]
 gi|268053625|ref|YP_003288982.1| ribosomal protein S13 [Saccharina ochotensis]
 gi|268053664|ref|YP_003289059.1| ribosomal protein S13 [Saccharina diabolica]
 gi|268053703|ref|YP_003289110.1| ribosomal protein S13 [Saccharina longipedalis]
 gi|262318167|dbj|BAI48492.1| ribosomal protein S13 [Saccharina japonica]
 gi|262318206|dbj|BAI48530.1| ribosomal protein S13 [Saccharina religiosa]
 gi|262318245|dbj|BAI48568.1| ribosomal protein S13 [Saccharina ochotensis]
 gi|262318284|dbj|BAI48606.1| ribosomal protein S13 [Saccharina diabolica]
 gi|262318323|dbj|BAI48644.1| ribosomal protein S13 [Saccharina longipedalis]
          Length = 119

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R+
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKRQ 112


>gi|62989713|emb|CAD91249.1| mitochondrial ribosomal protein RPS13 [Aa paleacea]
          Length = 116

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 2/113 (1%)

Query: 1   MARIAGV-NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           M+ I+G  ++P +K V  A   + GIG + +  +  +L I    ++++L +S++ Q+ Q 
Sbjct: 1   MSYISGARSVPDSK-VRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTQSQIDQMEQM 59

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I QD+ V  +L+R    +I+R + L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 60  ISQDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|62989725|emb|CAD91255.1| mitochondrial ribosomal protein RPS13 [Caladenia cf. caerulea Chase
           O-487]
          Length = 116

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+GV     ++V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGVRSVPDEQVRIASTKMDGIGPKKAIQVRDRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGKRADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|302023187|ref|ZP_07248398.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68]
          Length = 100

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 45  VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +  L   +   IR+ ++   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T 
Sbjct: 1   MKDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTK 59

Query: 105 TNARTRK 111
            NARTRK
Sbjct: 60  NNARTRK 66


>gi|24636937|gb|AAN63481.1|AF314103_1 ribosomal protein S13 [Dactylorhiza romana]
          Length = 116

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|327195251|ref|YP_004339033.1| ribosomal protein S13 [Coccomyxa sp. C-169]
 gi|325070747|gb|ADY75475.1| ribosomal protein S13 [Coccomyxa sp. C-169]
          Length = 134

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 63/112 (56%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I   N+   K++  AL  I+GIG + S+ IC+ L I    +V  L  S +  + Q I
Sbjct: 1   MIYILNTNLSDNKKIGNALPKIYGIGNQLSKQICDDLGISSGLKVGDLSPSHIDLLSQTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            Q Y +  +L+     + +RL  +  YRG+RH +GLP RGQRTH NA+T +K
Sbjct: 61  PQTYVIGAELQGETRRSKERLALVSSYRGIRHSQGLPSRGQRTHGNAQTARK 112


>gi|268164091|ref|YP_003288868.1| ribosomal protein S13 [Saccharina coriacea]
 gi|262318401|dbj|BAI48720.1| ribosomal protein S13 [Saccharina coriacea]
          Length = 119

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|62989759|emb|CAD91272.1| mitochondrial ribosomal protein RPS13 [Disa tripetaloides]
          Length = 116

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSSISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|268164052|ref|YP_003288817.1| ribosomal protein S13 [Saccharina angustata]
 gi|262318362|dbj|BAI48682.1| ribosomal protein S13 [Saccharina angustata]
          Length = 119

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGRNLENLA 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R   
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKRPSL 114


>gi|74325175|ref|YP_316595.1| ribosomal protein S13 [Thalassiosira pseudonana]
 gi|74100241|gb|AAZ99402.1| ribosomal protein S13 [Thalassiosira pseudonana]
          Length = 115

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    +P  K +  +L  + GIG   S  IC +L +    ++ +L   + I++ ++I
Sbjct: 1   MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           E  +  +  +LR++  + +K+L+ +  Y+G+R  RGLPVRGQRTHTNA+T
Sbjct: 61  ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKT 110


>gi|18024674|gb|AAF98448.1| putative mitochondrial 40S ribosomal protein [Aspergillus niger]
          Length = 148

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P  +R +++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+
Sbjct: 1   MVFILGVNFP--ERNLKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D ++E DLRR    NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 59  S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 112


>gi|62989831|emb|CAD91308.1| mitochondrial ribosomal protein RPS13 [Habenaria marmorata]
          Length = 116

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989799|emb|CAD91292.1| mitochondrial ribosomal protein RPS13 [Oncidium orillum]
          Length = 116

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|212537637|ref|XP_002148974.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224]
 gi|210068716|gb|EEA22807.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224]
          Length = 119

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  ++  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLQTFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +  ++E DLRR +  +IKRL D G YRG RH  GLPVRGQ T +  +T  K    
Sbjct: 61  SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115


>gi|62989825|emb|CAD91305.1| mitochondrial ribosomal protein RPS13 [Telipogon pogonostalix]
          Length = 116

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989769|emb|CAD91277.1| mitochondrial ribosomal protein RPS13 [Eulophia spectabilis]
 gi|62989791|emb|CAD91288.1| mitochondrial ribosomal protein RPS13 [Mormodes aromatica]
          Length = 116

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|242808625|ref|XP_002485205.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500]
 gi|218715830|gb|EED15252.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500]
          Length = 119

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  ++  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLETFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +  ++E DLRR +  +IKRL D G YRG RH  GLPVRGQ T +  +T  K    
Sbjct: 61  SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115


>gi|62989805|emb|CAD91295.1| mitochondrial ribosomal protein RPS13 [Pachyplectron arifolium]
          Length = 116

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|57281988|emb|CAD19553.1| ribosomal protein S13 [Campynema lineare]
          Length = 116

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|254580623|ref|XP_002496297.1| ZYRO0C15158p [Zygosaccharomyces rouxii]
 gi|238939188|emb|CAR27364.1| ZYRO0C15158p [Zygosaccharomyces rouxii]
          Length = 121

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +GIG  +++ +C+KL   P  R+HQL ES+++ I   +  +  +EGD R  V  NI   
Sbjct: 24  FYGIGEGTAEKVCSKLGFYPWMRMHQLSESQIMNIASEL-SNMTIEGDARAVVKENIALK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y+G+RH   LPVRGQ T  NA T +K  K
Sbjct: 83  KRIGSYQGMRHTLNLPVRGQHTRNNANTARKLNK 116


>gi|62989821|emb|CAD91303.1| mitochondrial ribosomal protein RPS13 [Ponthieva racemosa]
          Length = 116

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|24636925|gb|AAN63475.1|AF314097_1 ribosomal protein S13 [Agapanthus africanus]
          Length = 116

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I   R++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNRKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989781|emb|CAD91283.1| mitochondrial ribosomal protein RPS13 [Lycomormium squalidum]
          Length = 116

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|296040615|gb|ADG85275.1| ribosomal protein S13 [Silene noctiflora]
          Length = 116

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  I GIG K    +  +L +    ++ +L + ++ +I + I
Sbjct: 1   MPYISGARLVDDKQVKIALTKISGIGRKKGLQLSARLGLSENIKIKELTKYQIDKIEEII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           EQ++ V  +L+R+   +I RL+ + CYRG+RH+ GLP+RGQR+HTNART +K
Sbjct: 61  EQEHIVHWELKRSERTDIDRLISISCYRGIRHQDGLPLRGQRSHTNARTSRK 112


>gi|50261289|ref|YP_052897.1| ribosomal protein S13 [Saprolegnia ferax]
 gi|48237602|gb|AAT40651.1| ribosomal protein S13 [Saprolegnia ferax]
          Length = 117

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 64/105 (60%)

Query: 9   IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           I  +  ++ +L  ++GI    S+ IC  + I P+  +++L ++++ ++   I ++ ++E 
Sbjct: 9   ISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYINKNIKIEQ 68

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            L++    N   L+++   RG+RH  GLPVRGQRTHTNA+T KK 
Sbjct: 69  LLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKL 113


>gi|328860508|gb|EGG09614.1| hypothetical protein MELLADRAFT_31252 [Melampsora larici-populina
           98AG31]
          Length = 122

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 4/116 (3%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           + GVN+P  K V  AL    GIG  +++ ICN+L   P+  V   +         ++E D
Sbjct: 4   VLGVNLPERKLVQFALLQYVGIGHYTAKLICNRLQFHPKLTVDFKLSDPPKPKTLSLEAD 63

Query: 64  ----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                 +E DLRR V  NI     +G YRG RH  G PV GQRTHTNA+T KK  +
Sbjct: 64  PLQRLIIESDLRREVRANIAHHRAVGSYRGKRHALGFPVNGQRTHTNAKTAKKLNR 119


>gi|15218103|ref|NP_177898.1| 30S ribosomal protein S13, chloroplast, putative [Arabidopsis
           thaliana]
 gi|32363391|sp|Q9CA19|RT13_ARATH RecName: Full=Small ribosomal subunit protein S13, mitochondrial;
           Short=mS13; Flags: Precursor
 gi|12323293|gb|AAG51625.1|AC012193_7 putative 30S ribosomal protein S13; 38847-37703 [Arabidopsis
           thaliana]
 gi|33589778|gb|AAQ22655.1| At1g77750 [Arabidopsis thaliana]
 gi|332197896|gb|AEE36017.1| small ribosomal subunit protein S13 [Arabidopsis thaliana]
          Length = 154

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    +P  K +   L  ++GIG + S  +   L I   +    L   E+I +R+ + Q
Sbjct: 33  RVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVGQ 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +Q   +LRR V   I+RL+++ CYRG RHR GLP RGQRT TNART+K
Sbjct: 92  -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKK 139


>gi|57281962|emb|CAD19540.1| ribosomal protein S13 [Ixiolirion tataricum]
          Length = 116

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      + V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEEVRIASAKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERAHIERFISISRYRGIRHQDGSPLRGQRTHTNARTWRK 112


>gi|11830845|emb|CAA89892.1| ribosomal protein S13 [Magnolia x soulangeana]
 gi|30141203|emb|CAD30284.1| ribosomal protein S13 [Freesia sp. QC-2002]
          Length = 116

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      K+V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|255018384|ref|ZP_05290510.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-515]
          Length = 68

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 48/57 (84%), Gaps = 1/57 (1%)

Query: 55  QIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +IR+ +++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 2   KIREILDR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRK 57


>gi|62989739|emb|CAD91262.1| mitochondrial ribosomal protein RPS13 [Cleistes rosea]
          Length = 116

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 2/113 (1%)

Query: 1   MARIAGV-NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           M+ I+G  ++P +K V  A   + GIG K +  + ++L I    ++++L +S++ ++ Q 
Sbjct: 1   MSYISGARSVPDSK-VRIASTKMDGIGPKKAIQVRSRLGISGNIKINELTKSQIDKMEQM 59

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I QD+ V  + +R    +I+RL+ L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 60  ISQDHVVHWEFQRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|84508609|ref|YP_448656.1| ribosomal protein S13 [Desmarestia viridis]
 gi|45925641|gb|AAS79042.1| ribosomal protein S13 [Desmarestia viridis]
          Length = 119

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+GIG   S+ +C K     + R   +  S+   +    
Sbjct: 1   MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRG RHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKR 111


>gi|320582685|gb|EFW96902.1| putative DnaJ-like heat-shock protein [Pichia angusta DL-1]
          Length = 949

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G K+++ IC K+ + P  R+HQL E++V+ + + +  D  +   L + V  NIK    
Sbjct: 854 GVGLKTAEKICAKVGLYPSMRMHQLNETQVMAVTKEL-TDMTIGSRLLQQVRSNIKLKRA 912

Query: 84  LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            G Y+GLRH  GLPV GQRT  NART ++  K
Sbjct: 913 TGSYQGLRHAMGLPVHGQRTKYNARTARRLNK 944


>gi|62989711|emb|CAD91248.1| mitochondrial ribosomal protein RPS13 [Aeranthes moratii]
 gi|62989717|emb|CAD91251.1| mitochondrial ribosomal protein RPS13 [Arundina graminifolia]
 gi|62989719|emb|CAD91252.1| mitochondrial ribosomal protein RPS13 [Bletilla striata]
 gi|62989753|emb|CAD91269.1| mitochondrial ribosomal protein RPS13 [Dendrobium albosanguineum]
 gi|62989795|emb|CAD91290.1| mitochondrial ribosomal protein RPS13 [Nervilia aragoana]
 gi|62989807|emb|CAD91296.1| mitochondrial ribosomal protein RPS13 [Palmorchis trilobulata]
 gi|62989827|emb|CAD91306.1| mitochondrial ribosomal protein RPS13 [Thunia alba]
 gi|62989833|emb|CAD91309.1| mitochondrial ribosomal protein RPS13 [Phalaenopsis cornu-cervi]
          Length = 116

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989743|emb|CAD91264.1| mitochondrial ribosomal protein RPS13 [Cryptocentrum peruvianum]
 gi|62989745|emb|CAD91265.1| mitochondrial ribosomal protein RPS13 [Cymbidium sp. CQ-2003]
 gi|62989755|emb|CAD91270.1| mitochondrial ribosomal protein RPS13 [Dichaea riopalenquensis]
 gi|62989779|emb|CAD91282.1| mitochondrial ribosomal protein RPS13 [Lycaste aromatica]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281960|emb|CAD19539.1| ribosomal protein S13 [Rhodohypoxis milloides]
 gi|62989757|emb|CAD91271.1| mitochondrial ribosomal protein RPS13 [Zygostates grandiflora]
 gi|62989801|emb|CAD91293.1| mitochondrial ribosomal protein RPS13 [Oncidium splendidum]
 gi|62989823|emb|CAD91304.1| mitochondrial ribosomal protein RPS13 [Pterostylis nutans]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989723|emb|CAD91254.1| mitochondrial ribosomal protein RPS13 [Bulbophyllum lobbii]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIKVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|33341146|gb|AAQ15134.1|AF355059_1 RPS13 [Asphodelus sp. Quagliariello 16105]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|89280752|ref|YP_514659.1| ribosomal protein S13 [Oryza sativa Indica Group]
 gi|289065036|ref|YP_003433847.1| ribosomal protein small subunit 13 [Oryza rufipogon]
 gi|74100119|gb|AAZ99283.1| ribosomal protein S13 [Oryza sativa Indica Group]
 gi|74100174|gb|AAZ99337.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|74100228|gb|AAZ99390.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|285026118|dbj|BAI67951.1| ribosomal protein small subunit 13 [Oryza rufipogon]
 gi|285026168|dbj|BAI68000.1| ribosomal protein small subunit 13 [Oryza sativa Indica Group]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 69/113 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K 
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKL 113


>gi|76780564|emb|CAD92012.1| mitochondrial ribosomal protein RPS13 [Xeronema callistemon]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGIRGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989783|emb|CAD91284.1| mitochondrial ribosomal protein RPS13 [Megastylis glandulosa]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|156848892|ref|XP_001647327.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118012|gb|EDO19469.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 121

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 11  RAKRVVR-ALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           + K VVR AL    +G+G +++Q IC+KL   P  R+HQL E +++ I   +  +  +EG
Sbjct: 11  KGKEVVRIALASKFYGVGLETAQKICSKLGFYPWMRMHQLTEPQILGITSELS-NMTIEG 69

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + R  V  NI     +G Y+GLRH   LPVRGQ T  NA T ++  +
Sbjct: 70  NARAVVKNNIALKRRIGSYQGLRHAMNLPVRGQNTRNNAHTARRLNR 116


>gi|62989819|emb|CAD91302.1| mitochondrial ribosomal protein RPS13 [Polystachya pubescens]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHIVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|76780566|emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardia rosea]
 gi|76780568|emb|CAD92014.1| mitochondrial ribosomal protein RPS13 [Uvularia perfoliata]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|33341144|gb|AAQ15133.1|AF355058_1 RPS13 [Asparagus sp. Quagliariello 16104]
          Length = 116

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLIISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|145932453|ref|YP_001165365.1| ribosomal protein S13 [Phytophthora ramorum]
 gi|110169651|gb|ABG54116.1| ribosomal protein S13 [Phytophthora ramorum]
 gi|188038014|gb|ACD46632.1| ribosomal protein S13 [Phytophthora ramorum]
          Length = 138

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S  IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK----FGKG 116
            ++ +VE  L+++    I  L+++   RG+R  +GLPVRGQRTHTNA+T KK    F K 
Sbjct: 61  NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQIFIKK 120

Query: 117 GVARKR 122
            V+R +
Sbjct: 121 RVSRNK 126


>gi|56791629|gb|AAW30352.1| ribosomal protein S13 [Eichhornia crassipes]
          Length = 110

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 62/95 (65%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   I GIG K +  +  +L I    ++++L + ++ Q+ Q I+QD+ V  +L+R    +
Sbjct: 15  ASTKIDGIGPKKAIQLRYRLGISGNIKINELTKYQIDQMEQMIDQDHFVHWELKRGERAD 74

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 75  IERLISISRYRGIRHQDGSPLRGQRTHTNARTSRK 109


>gi|299830454|ref|YP_003734825.1| ribosomal protein L13 [Pythium ultimum]
 gi|299830485|ref|YP_003734856.1| ribosomal protein L13 [Pythium ultimum]
 gi|269810831|gb|ACZ43860.1| ribosomal protein L13 [Pythium ultimum]
 gi|269810862|gb|ACZ43891.1| ribosomal protein L13 [Pythium ultimum]
 gi|269812144|gb|ACZ44442.1| ribosomal protein L13 [Pythium ultimum]
 gi|269812175|gb|ACZ44473.1| ribosomal protein L13 [Pythium ultimum]
          Length = 137

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 70/121 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINEYQSKKICKNIGINPQITINKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ ++E  L+++    +  L+D+   RG+R  +GLPVRGQRTHTNA+T KK  K  V +
Sbjct: 61  NKNIKIEQLLKQSKKDRLNELLDIKSNRGIRLSQGLPVRGQRTHTNAKTVKKLKKIFVQK 120

Query: 121 K 121
           +
Sbjct: 121 Q 121


>gi|62989815|emb|CAD91300.1| mitochondrial ribosomal protein RPS13 [Pleurothallis endotrachys]
          Length = 116

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ +I Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989817|emb|CAD91301.1| mitochondrial ribosomal protein RPS13 [Podochilus cultratus]
          Length = 116

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989721|emb|CAD91253.1| mitochondrial ribosomal protein RPS13 [Bracisepalum selebicum]
 gi|62989735|emb|CAD91260.1| mitochondrial ribosomal protein RPS13 [Chelonistele amplissima]
 gi|62989751|emb|CAD91268.1| mitochondrial ribosomal protein RPS13 [Geesinkorchis alaticallosa]
 gi|62989765|emb|CAD91275.1| mitochondrial ribosomal protein RPS13 [Entomophobia kinabaluensis]
 gi|62989793|emb|CAD91289.1| mitochondrial ribosomal protein RPS13 [Nabaluia angustifolia]
          Length = 116

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989771|emb|CAD91278.1| mitochondrial ribosomal protein RPS13 [Goodyera pubescens]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|24636958|gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hybrid cultivar]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|30141201|emb|CAD30283.1| ribosomal protein S13 [Hemerocallis littorea]
          Length = 118

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 74/115 (64%), Gaps = 4/115 (3%)

Query: 1   MARIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57
           M+ I+G   V++P ++ V  A   + GIG K +  +  +L I    ++++L + ++ Q+ 
Sbjct: 1   MSYISGARSVSVPDSQ-VRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQME 59

Query: 58  QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           Q I QD+ V  +L+R    +I+RL+ +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 60  QMIGQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTCRK 114


>gi|62989773|emb|CAD91279.1| mitochondrial ribosomal protein RPS13 [Huttonaea grandiflora]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|81176511|ref|YP_398395.1| rp13 [Triticum aestivum]
 gi|134064|sp|P07924|RT13_WHEAT RecName: Full=Ribosomal protein S13, mitochondrial
 gi|13716|emb|CAA68574.1| unnamed protein product [Triticum aestivum]
 gi|78675235|dbj|BAE47660.1| rps13 [Triticum aestivum]
 gi|164422217|gb|ABY55190.1| ribosomal protein S13 [Bambusa oldhamii]
 gi|169649048|gb|ACA62609.1| rp13 [Triticum aestivum]
 gi|291498599|gb|ADE08073.1| rps13 [Triticum aestivum]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|259482715|tpe|CBF77457.1| TPA: 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640)
           [Aspergillus nidulans FGSC A4]
          Length = 119

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P  + V ++L    G+G + S  I ++  I    +V +L   +V+ +  A+
Sbjct: 1   MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDL-TAV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
             + ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT  N +
Sbjct: 60  LSEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNK 107


>gi|303314875|ref|XP_003067446.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107114|gb|EER25301.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 149

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 31  MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T  +T  K  
Sbjct: 91  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRTQTKTAIKLN 143


>gi|76780560|emb|CAD92010.1| mitochondrial ribosomal protein RPS13 [Polygonatum hookeri]
          Length = 116

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989763|emb|CAD91274.1| mitochondrial ribosomal protein RPS13 [Earina autumnalis]
 gi|62989777|emb|CAD91281.1| mitochondrial ribosomal protein RPS13 [Listera smallii]
          Length = 116

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281968|emb|CAD19543.1| ribosomal protein S13 [Milligania stylosa]
 gi|57281972|emb|CAD19545.1| ribosomal protein S13 [Doryanthes palmeri]
 gi|76780557|emb|CAD92008.1| mitochondrial ribosomal protein RPS13 [Isophysis tasmanica]
          Length = 116

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|30141205|emb|CAD30285.1| ribosomal protein S13 [Lilium speciosum]
          Length = 116

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  +   + GIG K +  +  +L +  + ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +LRR    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHLVHWELRRGSRADIERLISIYPYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|30141207|emb|CAD30286.1| ribosomal protein S13 [Fritillaria persica]
          Length = 116

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  +   + GIG K +  +  +L +  + ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +LRR    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHLVHWELRRGSRADIERLIYISPYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|33341158|gb|AAQ15140.1|AF355065_1 RPS13 [Colchicum persicum]
          Length = 116

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G ++   ++V  A   I GIG K +  +  +L I    ++ +L +S++  + Q I
Sbjct: 1   MSYISGASLVPDEQVRIASTKIPGIGPKKAIQVRYRLGISGNIKMKELTKSQIDLLEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  CQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|57281984|emb|CAD19551.1| ribosomal protein S13 [Drymophila sp. Chase 194]
          Length = 116

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989715|emb|CAD91250.1| mitochondrial ribosomal protein RPS13 [Arpophyllum giganteum]
 gi|62989731|emb|CAD91258.1| mitochondrial ribosomal protein RPS13 [Cattleya aurantiaca]
 gi|62989741|emb|CAD91263.1| mitochondrial ribosomal protein RPS13 [Coelia triptera]
 gi|62989785|emb|CAD91285.1| mitochondrial ribosomal protein RPS13 [Meiracyllium trinasutum]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281992|emb|CAD19555.1| ribosomal protein S13 [Philesia magellanica]
 gi|57281994|emb|CAD19556.1| ribosomal protein S13 [Lapageria rosea]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQGGSPLRGQRTHTNARTFRK 112


>gi|57281980|emb|CAD19549.1| ribosomal protein S13 [Tecophilaea violiflora]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYILGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989727|emb|CAD91256.1| mitochondrial ribosomal protein RPS13 [Caleana major]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTQMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989809|emb|CAD91297.1| mitochondrial ribosomal protein RPS13 [Panisea tricallosa]
 gi|62989811|emb|CAD91298.1| mitochondrial ribosomal protein RPS13 [Pholidota carnea]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989729|emb|CAD91257.1| mitochondrial ribosomal protein RPS13 [Calypso bulbosa]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIEKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989829|emb|CAD91307.1| mitochondrial ribosomal protein RPS13 [Wullschlaegelia calcarata]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 67/109 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASKKMDGIGPKKAIQVRYRLGIRGNIKMNELTKPQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            QD+ V  +L+R    +IKRL+ L  YRG+RH+ G P+RGQRTHTNART
Sbjct: 61  SQDHFVHWELKRGERADIKRLISLSRYRGIRHQDGSPLRGQRTHTNART 109


>gi|298253054|ref|ZP_06976846.1| ribosomal protein S13 [Gardnerella vaginalis 5-1]
 gi|297532449|gb|EFH71335.1| ribosomal protein S13 [Gardnerella vaginalis 5-1]
          Length = 70

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 45/56 (80%)

Query: 56  IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +R  +E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK
Sbjct: 1   MRDYLEANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRK 56


>gi|24636931|gb|AAN63478.1|AF314100_1 ribosomal protein S13 [Triteleia laxa]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNSKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQ+THTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQQTHTNARTFRK 112


>gi|322706012|gb|EFY97594.1| 30S ribosomal protein S13 [Metarhizium anisopliae ARSEF 23]
          Length = 119

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  +   +
Sbjct: 1   MVFILGVNFNDGKLVKKALESFYALGSTTSSRIMAKYSIHKLAKVGSLSPRTVTSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 61  SQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMGLPVRGQRTRTQTATANKLNR 114


>gi|57281974|emb|CAD19546.1| ribosomal protein S13 [Aphyllanthes monspeliensis]
          Length = 116

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  +   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRISSTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHKDGSPLRGQRTHTNARTFRK 112


>gi|302755154|ref|XP_002961001.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii]
 gi|302767174|ref|XP_002967007.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii]
 gi|300164998|gb|EFJ31606.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii]
 gi|300171940|gb|EFJ38540.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii]
          Length = 113

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72
           K V  AL  I+G+G + + +IC    I  + +++ + +    ++   I +++ VE +L  
Sbjct: 3   KAVKFALPRIYGVGRRKAAEICAVFGIGDDVKMNSVPDELFNRMMNYIHENHLVEKELAL 62

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +V M+IKRL+ +G YRG RH  GLP+RGQRTHTNA +
Sbjct: 63  SVQMDIKRLISIGSYRGYRHTVGLPLRGQRTHTNAMS 99


>gi|134062|sp|P15758|RT13_OENBE RecName: Full=Ribosomal protein S13, mitochondrial
 gi|70973|pir||R3OB3M ribosomal protein S13 - evening primrose mitochondrion
          Length = 114

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  + ++L    +R+  +L + ++ QI Q  
Sbjct: 1   MSYISGARLVADEQVRIASTKMDGIGPKKAIQVRSRLGGNIKRK--ELTKYQIDQIEQMR 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQR+HTNART +K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRK 110


>gi|6324248|ref|NP_014318.1| Sws2p [Saccharomyces cerevisiae S288c]
 gi|1730748|sp|P53937|SWS2_YEAST RecName: Full=37S ribosomal protein SWS2, mitochondrial; AltName:
           Full=Sick without securin protein 2
 gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae]
 gi|1301975|emb|CAA95955.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|71064119|gb|AAZ22527.1| Sws2p [Saccharomyces cerevisiae]
 gi|151944453|gb|EDN62731.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190409070|gb|EDV12335.1| hypothetical protein SCRG_03217 [Saccharomyces cerevisiae RM11-1a]
 gi|256270278|gb|EEU05496.1| Sws2p [Saccharomyces cerevisiae JAY291]
 gi|259149280|emb|CAY82522.1| Sws2p [Saccharomyces cerevisiae EC1118]
 gi|285814570|tpg|DAA10464.1| TPA: Sws2p [Saccharomyces cerevisiae S288c]
 gi|323335810|gb|EGA77089.1| Sws2p [Saccharomyces cerevisiae Vin13]
          Length = 143

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +GIG  +++ IC+KL   P  R+HQL E +++ I   +     +EGD R  V  NI   
Sbjct: 24  FYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASELS-TMTIEGDARAIVKDNIALK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y G+RH   LPVRGQ T  NA+T +K  K
Sbjct: 83  RKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNK 116


>gi|57281990|emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax]
          Length = 116

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 68/109 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIAQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHT+ART
Sbjct: 61  GQDHVVHWELKRGERAHIERLISISRYRGIRHQEGSPLRGQRTHTSART 109


>gi|57281982|emb|CAD19550.1| ribosomal protein S13 [Luzuriaga radicans]
          Length = 116

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG + +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|324575274|gb|ADY49937.1| 30S ribosomal protein S13 [Ascaris suum]
          Length = 62

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 40/47 (85%)

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +VEGDLRR V +NIKRLM++  YRG+RHRRGLPVRGQ T  N+RTRK
Sbjct: 5   KVEGDLRREVQLNIKRLMEIASYRGIRHRRGLPVRGQHTKNNSRTRK 51


>gi|24636929|gb|AAN63477.1|AF314099_1 ribosomal protein S13 [Ipheion uniflorum]
 gi|33341148|gb|AAQ15135.1|AF355060_1 RPS13 [Nothoscordum inodorum]
          Length = 116

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVNWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|24636962|gb|AAN63494.1|AF315230_1 ribosomal protein S13 [Tulipa sp. CQ-2001]
          Length = 116

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281958|emb|CAD19538.1| rps13 [Xanthorrhoea resinosa]
          Length = 116

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|255718259|ref|XP_002555410.1| KLTH0G08646p [Lachancea thermotolerans]
 gi|238936794|emb|CAR24973.1| KLTH0G08646p [Lachancea thermotolerans]
          Length = 149

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
            +GIG K+S+ +C KL   P  R+HQL E +++ I   +     +EG+ R  V  NI   
Sbjct: 24  FYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL-STMTIEGNARAVVKENIALK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y+G+RH   LPVRGQ T  NA+T ++  +
Sbjct: 83  RRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNR 116


>gi|57281996|emb|CAD19557.1| ribosomal protein S13 [Rhipogonum elseyanum]
          Length = 116

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 67/109 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNART 109


>gi|30141211|emb|CAD30288.1| ribosomal protein S13 [Posidonia oceanica]
          Length = 116

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLIYISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|4467407|emb|CAA69616.2| ribosomal protein S13 [Elymus sibiricus]
          Length = 116

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MXYIXGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISXNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|24636927|gb|AAN63476.1|AF314098_1 ribosomal protein S13 [Muscari botryoides]
 gi|24636933|gb|AAN63479.1|AF314101_1 ribosomal protein S13 [Agave americana]
 gi|24636935|gb|AAN63480.1|AF314102_1 ribosomal protein S13 [Polianthes tuberosa]
 gi|24636939|gb|AAN63482.1|AF314104_1 ribosomal protein S13 [Serapias lingua]
 gi|33341150|gb|AAQ15136.1|AF355061_1 RPS13 [Tulbaghia alliacea]
 gi|33341154|gb|AAQ15138.1|AF355063_1 RPS13 [Yucca sp. Quagliariello 16107]
 gi|57281970|emb|CAD19544.1| ribosomal protein S13 [Herreria salsaparilha]
 gi|76780555|emb|CAD92007.1| mitochondrial ribosomal protein RPS13 [Johnsonia pubescens]
 gi|76780562|emb|CAD92011.1| mitochondrial ribosomal protein RPS13 [Eriospermum flagelliforme]
          Length = 116

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989813|emb|CAD91299.1| mitochondrial ribosomal protein RPS13 [Phreatia tahitensis]
          Length = 116

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|84508569|ref|YP_448617.1| ribosomal protein S13 [Fucus vesiculosus]
 gi|39653292|gb|AAR29311.1| ribosomal protein S13 [Fucus vesiculosus]
          Length = 119

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++  I+GIG   S+ +C K     + R   +  S+   +    
Sbjct: 1   MPFIIGTPIPEDKILVQSVSQIYGIGLSQSKILCRKAGFGQDCRGKNVSFSQGKILGNLA 60

Query: 61  EQDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           E      G DLRR     I+RL  +  YRGLRH++GLP RGQRTHTNA+ R +F
Sbjct: 61  ENTSLFLGSDLRRFHNDKIRRLCLMSSYRGLRHKKGLPARGQRTHTNAKKRLQF 114


>gi|57281966|emb|CAD19542.1| ribosomal protein S13 [Convallaria keiskei]
          Length = 116

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|24636960|gb|AAN63493.1|AF315229_1 ribosomal protein S13 [Iris sp. CQ-2001]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPHEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ +  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVLHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|57281964|emb|CAD19541.1| ribosomal protein S13 [Aspidistra elatior]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989803|emb|CAD91294.1| mitochondrial ribosomal protein RPS13 [Orchis italica]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 61/95 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I QD+ V  +L+R    +
Sbjct: 18  ASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMISQDHVVHWELKRGERAD 77

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+R + L  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 78  IERFISLSRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|62989775|emb|CAD91280.1| mitochondrial ribosomal protein RPS13 [Liparis liliifolia]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281998|emb|CAD19558.1| ribosomal protein S13 [Smilax glauca]
 gi|76780553|emb|CAD92006.1| mitochondrial ribosomal protein RPS13 [Borya septentrionalis]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG + +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|33341156|gb|AAQ15139.1|AF355064_1 RPS13 [Danae racemosa]
 gi|57282000|emb|CAD19559.1| ribosomal protein S13 [Ruscus aculeatus]
          Length = 116

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|56791633|gb|AAW30354.1| ribosomal protein S13 [Liriodendron tulipifera]
          Length = 109

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 64/100 (64%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72
           K+V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I QD+ V  +L+R
Sbjct: 9   KQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKR 68

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
               +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 69  GERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108


>gi|297842551|ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334998|gb|EFH65416.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 154

 Score = 73.6 bits (179), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    +P    +   L  ++GIG + S  +   L I   +    L   E+I +R+ + Q
Sbjct: 33  RVGNAEVPNNMPLKTGLQAVYGIGRRKSHQVLCHLGIT-NKLARDLTGKELIDLREEVGQ 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +Q   +LRR V   I+RL+++ CYRG RHR G+P RGQRT TNART+K
Sbjct: 92  -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKK 139


>gi|45191023|ref|NP_985277.1| AER422Cp [Ashbya gossypii ATCC 10895]
 gi|44984091|gb|AAS53101.1| AER422Cp [Ashbya gossypii ATCC 10895]
          Length = 144

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 11  RAKRVVR--ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
           + K VVR       +GIG K+S+ +C KL + P  R+  L E +++ +   + +   +E 
Sbjct: 11  KGKEVVRIGLASKFYGIGLKTSERLCAKLGLYPWMRMQSLTEPQIMAMSTELSK-MTIED 69

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           D R  V  NI     +G Y GLRH  GLPV GQRT TNA+T +K  +
Sbjct: 70  DARAIVKENIALKRRIGSYAGLRHAMGLPVNGQRTRTNAKTARKLNR 116


>gi|62989767|emb|CAD91276.1| mitochondrial ribosomal protein RPS13 [Epipactis helleborine]
          Length = 116

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|57281956|emb|CAD19537.1| ribosomal protein S13 [Anthericum liliago]
          Length = 116

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVTIASIKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G PVRGQRTHTNA T +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPVRGQRTHTNAGTFRK 112


>gi|56791627|gb|AAW30351.1| ribosomal protein S13 [Calycanthus floridus]
          Length = 109

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 61/95 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   + GIG K +  +  +L I    ++++L + ++ QI Q I QD+ V  +L+R    +
Sbjct: 14  ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHVVHWELKRGERAD 73

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 74  IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108


>gi|62989787|emb|CAD91286.1| mitochondrial ribosomal protein RPS13 [Microtis parviflora]
          Length = 116

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|24636954|gb|AAN63490.1|AF315226_1 ribosomal protein S13 [Hyacinthus sp. CQ-2001]
          Length = 116

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L +    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGLSGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|24636956|gb|AAN63491.1|AF315227_1 ribosomal protein S13 [Sansevieria trifasciata]
          Length = 116

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 61/95 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   I GIG K +  +  +L I    ++++L + ++ QI Q + QD+ V  +L+R    +
Sbjct: 18  ASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQILGQDHVVHWELKRGERAD 77

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 78  IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|57281986|emb|CAD19552.1| ribosomal protein S13 [Eustrephus latifolius]
          Length = 116

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q +
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|308153493|sp|P82163|RR13_SPIOL RecName: Full=30S ribosomal protein S13, chloroplastic; Flags:
           Precursor
 gi|188036214|pdb|3BBN|M Chain M, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 145

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 12/109 (11%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+    
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKE--- 103

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
                   +R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K
Sbjct: 104 --------KRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLK 144


>gi|302416813|ref|XP_003006238.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum
           VaMs.102]
 gi|261355654|gb|EEY18082.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum
           VaMs.102]
          Length = 119

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G   SQ I  K +I P  +V  L    +  +   +
Sbjct: 1   MVFILGVNFSEQKLVKKALESFYALGPSVSQRILAKYSIHPWAKVGSLAPKTITSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +E D ++ +  NI+RL D+G YRG RH   LP RGQRT T   T KK  +  V R
Sbjct: 61  SV-MTIENDAKKVLRENIQRLKDMGSYRGRRHAMNLPARGQRTRTQIETAKKLNR--VDR 117

Query: 121 KR 122
           KR
Sbjct: 118 KR 119


>gi|57281976|emb|CAD19547.1| ribosomal protein S13 [Behnia reticulata]
 gi|57281978|emb|CAD19548.1| ribosomal protein S13 [Blandfordia punicea]
          Length = 116

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTFRK 112


>gi|62989733|emb|CAD91259.1| mitochondrial ribosomal protein RPS13 [Cephalanthera rubra]
          Length = 116

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|145932363|ref|YP_001165412.1| ribosomal protein S13 [Phytophthora sojae]
 gi|110169606|gb|ABG54072.1| ribosomal protein S13 [Phytophthora sojae]
          Length = 137

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 64/109 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTILYGINEYQSKKICKNIGINPQITLNKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            ++ +VE  L+++    +  L+++   RG+R  +GLPVRGQRTHTNA+T
Sbjct: 61  NKNLKVEQFLKKSKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNAKT 109


>gi|62989737|emb|CAD91261.1| mitochondrial ribosomal protein RPS13 [Chysis bractescens]
          Length = 116

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|320037802|gb|EFW19739.1| 40S ribosomal protein S13 [Coccidioides posadasii str. Silveira]
          Length = 156

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 31  MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T
Sbjct: 91  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 134


>gi|289615638|emb|CBI57559.1| unnamed protein product [Sordaria macrospora]
          Length = 119

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   +G+G ++S  I  K +I P  ++  L   +++    A 
Sbjct: 1   MVFILGVNFNEQKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTL-PPKIVTALTAE 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR V  NIKRL D+G YRG RH  GLPVRGQ+T       +K  K
Sbjct: 60  LSTMTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114


>gi|85091144|ref|XP_958758.1| hypothetical protein NCU09539 [Neurospora crassa OR74A]
 gi|28920142|gb|EAA29522.1| hypothetical protein NCU09539 [Neurospora crassa OR74A]
 gi|38566865|emb|CAE76171.1| probable ribosomal protein S13 [Neurospora crassa]
          Length = 119

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   +G+G ++S  I  K +I P  ++  L   +++    A 
Sbjct: 1   MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTL-PPKIVTALTAE 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR V  NIKRL D+G YRG RH  GLPVRGQ+T       +K  K
Sbjct: 60  LSTMTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114


>gi|56791637|gb|AAW30356.1| ribosomal protein S13 [Platanus occidentalis]
          Length = 108

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 60/95 (63%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   + GIG K +  +  +L I    ++ +L + ++ QI Q I QD+ V  +L+R    +
Sbjct: 14  ASTKMDGIGPKKAIQVRYQLGISGNIKIRELTKYQIDQIEQMIGQDHVVHWELKRGERAD 73

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 74  IERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 108


>gi|67528950|ref|XP_662072.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4]
 gi|40741043|gb|EAA60233.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4]
          Length = 130

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 3/108 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P  +  +++L    G+G + S  I ++  I    +V +L   +V+ +  A+
Sbjct: 1   MVFILGVNFPEGQ--LKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDL-TAV 57

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
             + ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT  N +
Sbjct: 58  LSEMKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNK 105


>gi|56791631|gb|AAW30353.1| ribosomal protein S13 [Laurus nobilis]
          Length = 115

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 61/95 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I QD+ V  +L+R    +
Sbjct: 18  ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMIGQDHVVHWELKRGERAD 77

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 78  IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|56791625|gb|AAW30350.1| ribosomal protein S13 [Amborella trichopoda]
          Length = 102

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   I GIG K +  + ++L I    ++++L + ++ ++ Q I QD+ V  + +R    +
Sbjct: 11  ASTKIDGIGPKKAIQVRSRLGISGNIKMNELTKYQIDKMEQMIGQDHVVHWEFKRGERAD 70

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART
Sbjct: 71  IERLISISRYRGIRHKDGSPLRGQRTHTNART 102


>gi|119175400|ref|XP_001239936.1| hypothetical protein CIMG_09557 [Coccidioides immitis RS]
          Length = 125

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 1   MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T
Sbjct: 61  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 104


>gi|213647332|ref|ZP_03377385.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 44

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/36 (94%), Positives = 35/36 (97%)

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 1   MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 36


>gi|49147226|ref|YP_025819.1| ribosomal protein S13 [Pseudendoclonium akinetum]
 gi|33439241|gb|AAQ18778.1| ribosomal protein S13 [Pseudendoclonium akinetum]
          Length = 119

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           + G N+   K    AL  I+G+G KS+  +CN + I P+ R+ +L  +++  + ++  + 
Sbjct: 3   LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRR- 61

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             +  + +R     IK L+ + CYRG RH   LP RGQRT TNA T K  
Sbjct: 62  -LIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNL 110


>gi|46126121|ref|XP_387614.1| hypothetical protein FG07438.1 [Gibberella zeae PH-1]
          Length = 119

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  I   +
Sbjct: 1   MVFLLGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSITAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRGQRT T
Sbjct: 61  SQ-MTIETDARRLVQENIRRLKDMGSYRGRRHAMGLPVRGQRTRT 104


>gi|224365646|ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera]
 gi|209954170|emb|CAQ77617.1| ribosomal protein S13 [Vitis vinifera]
 gi|239764761|gb|ACS15230.1| ribosomal protein S13 [Vitis vinifera]
          Length = 116

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+ H+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGICHQDGSPLRGQRTHTNARTCRK 112


>gi|56791635|gb|AAW30355.1| ribosomal protein S13 [Piper betle]
          Length = 109

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 61/95 (64%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   + GIG K +  +  +L I    ++++L + ++ ++ Q I QD+ V  +L++    +
Sbjct: 14  ASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHVVHWELKKGERAD 73

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G PVRGQRTHTNART +K
Sbjct: 74  IERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108


>gi|62989789|emb|CAD91287.1| mitochondrial ribosomal protein RPS13 [Monophyllorchis sp. Cassio
           C282]
          Length = 116

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 66/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GI  K +  +  +L I    ++ +L +S++ QI Q I
Sbjct: 1   MSYISGARSFPDEQVRIASTKMDGIAHKKAMKVRYRLGISGNIKMTELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHT ART +K
Sbjct: 61  SQDHVVHWELKRGERADIERSISLSRYRGIRHQDGSPLRGQRTHTIARTCRK 112


>gi|171693473|ref|XP_001911661.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946685|emb|CAP73488.1| unnamed protein product [Podospora anserina S mat+]
          Length = 119

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN   AK V +AL + + +G +++  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D R+ +  NIKRL D+G YRG RH   LPVRGQRT    +T  K  +
Sbjct: 61  S-TMVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNR 114


>gi|226348810|gb|ACO50714.1| ribosomal protein S13 [Micromonas pusilla CCMP1545]
          Length = 118

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 11  RAKRVVR-ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
           +A R +R AL  ++G+G  ++Q +C++L   P+     L      Q+ + +   +    +
Sbjct: 10  KADRPIRLALTQVYGLGPSTAQQLCDQLGFHPKMTTGSLKAGHWDQLARIVSAYHITGAE 69

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           L+R  A +I+R + +  Y+G R  +GLP+RGQRTHTNART +K
Sbjct: 70  LKRVQAEDIQRTVRMSSYKGFRFTQGLPLRGQRTHTNARTARK 112


>gi|50409133|ref|XP_456841.1| DEHA2A11704p [Debaryomyces hansenii CBS767]
 gi|49652505|emb|CAG84816.1| DEHA2A11704p [Debaryomyces hansenii]
          Length = 121

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G+ +++ IC K+ I P+ R++QL E +++ I + +  D  +EG L++ +  +IK  
Sbjct: 24  IFGVGYNTAERICAKVGIYPKMRMNQLTEPQIMAINKELS-DLTIEGHLKQKILDDIKLK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G   G RH  GLPVRGQRT  N++T  +  +
Sbjct: 83  RSIGSIAGSRHAAGLPVRGQRTRNNSQTANRLNR 116


>gi|62989747|emb|CAD91266.1| mitochondrial ribosomal protein RPS13 [Cypripedium adamianum]
 gi|62989749|emb|CAD91267.1| mitochondrial ribosomal protein RPS13 [Paphiopedilum insigne]
          Length = 117

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR-GLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+  G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGGSPLRGQRTHTNARTCRK 113


>gi|13187|emb|CAA38280.1| ribosomal protein S13 [Oenothera berteroana]
          Length = 114

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  + ++L    +R+  +L + ++ QI Q  
Sbjct: 1   MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRSRLGGNIKRK--ELTKYQIDQIEQMR 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ G P+RGQR+HTNART +K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRSHTNARTSRK 110


>gi|33341152|gb|AAQ15137.1|AF355062_1 RPS13 [Dracaena sp. Quagliariello 16106]
          Length = 116

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 60/95 (63%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           A   I GIG K +  +  +L I    ++++L + ++  + Q I QD+ V  +L+R    +
Sbjct: 18  ASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDLLEQMIGQDHVVHWELKRGERAD 77

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 78  IERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|110812358|gb|ABG91714.1| ribosomal protein S13 [Shewanella putrefaciens 200]
          Length = 44

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/36 (91%), Positives = 34/36 (94%)

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK
Sbjct: 1   MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRK 36


>gi|56791639|gb|AAW30357.1| ribosomal protein S13 [Eschscholzia californica]
          Length = 116

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 66/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G      ++V  A   I GIG + +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYIQGXRSVPDEQVRIASTKIDGIGPQKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R     I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKREERAXIERLISIYRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|255727707|ref|XP_002548779.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404]
 gi|240133095|gb|EER32651.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404]
          Length = 122

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG+++++ +  K+ I P  R++QL E +++ + + I Q   VEG L++ +  +IK  
Sbjct: 24  IFGIGYQTAEKLMAKVGIYPNCRMNQLSEPQIMDLNKEISQ-LLVEGHLKQKINNDIKLK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
              G Y G RH  G PV GQRT TNA T +K  K
Sbjct: 83  RTTGSYAGSRHALGFPVHGQRTRTNASTARKLNK 116


>gi|229315919|ref|YP_002860145.1| ribosomal protein S13 [Micromonas sp. RCC299]
 gi|226431204|gb|ACO55609.1| ribosomal protein S13 [Micromonas sp. RCC299]
          Length = 120

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73
           +V  AL  I+GIG  ++  +C++L +     V  L  +++ Q+ + I + +    +L R 
Sbjct: 14  KVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVINRFHVTGQELERV 73

Query: 74  VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR-TRKK 112
           +  +I R + +  Y+G R  +GLPVRGQRTHTNAR TRKK
Sbjct: 74  IQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKK 113


>gi|134058479|emb|CAL00688.1| unnamed protein product [Aspergillus niger]
          Length = 104

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           +++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+  D ++E DLRR   
Sbjct: 1   MKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAALS-DMKIENDLRRQYL 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 60  DNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 99


>gi|283795035|ref|YP_003359452.1| ribosomal protein S13 [Synedra acus]
 gi|261279691|gb|ACX61999.1| ribosomal protein S13 [Synedra acus]
          Length = 117

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ--VEGDLRRTVAM 76
           L  I+GIG K S  IC KL +       Q+ ++ +  +   + ++Y+  V  +L++  + 
Sbjct: 18  LTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNKEYKLKVSNELKKIESF 77

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +++L+ +   RGLR  +GLPVRGQRTHTNA+T KK
Sbjct: 78  RLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKK 113


>gi|71005516|ref|XP_757424.1| hypothetical protein UM01277.1 [Ustilago maydis 521]
 gi|46096907|gb|EAK82140.1| hypothetical protein UM01277.1 [Ustilago maydis 521]
          Length = 361

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 47/164 (28%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------- 55
           + GV++   K V  AL   +GI + ++  +C +L++     V  L ES++ Q        
Sbjct: 171 LLGVHLADHKLVRIALTNFYGISYATANRLCARLSLHDRATVSSLTESQITQLSAYLSSP 230

Query: 56  -------------------------IRQAIEQD--------YQVEGDLRRTVAMNIKRLM 82
                                    +R ++EQ+         ++E DL+R +  NI    
Sbjct: 231 GSIPARKASPTLLPSSSAVCSSQDVVRPSMEQNAANDALRQIKIEADLKRVLHANINHHR 290

Query: 83  DLGCYRGLRHRRGLPVRGQRTHTNARTRKKF------GKGGVAR 120
           D+G YRG RH   LPVRGQRT TNART KK       G G VAR
Sbjct: 291 DVGSYRGRRHAAHLPVRGQRTSTNARTAKKLNRLERRGFGTVAR 334


>gi|325092307|gb|EGC45617.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H88]
          Length = 125

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G+N P  + V +AL    GIG  +   +  +  +    ++  L   +V+ +  A+
Sbjct: 1   MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ T +  +T  K  K
Sbjct: 61  SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNTRSQIKTAIKLNK 114


>gi|9695400|ref|NP_037622.1| ribosomal protein S13 [Phytophthora infestans]
 gi|6692652|gb|AAF24795.1|U17009_28 ribosomal protein S13 [Phytophthora infestans]
 gi|58012158|gb|AAW62566.1| ribosomal protein S13 [Phytophthora infestans]
          Length = 137

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 61/107 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINEFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
            ++ +VE  L++     +  L+++   RG+R  +GLPVRGQRTHTNA
Sbjct: 61  NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107


>gi|62989761|emb|CAD91273.1| mitochondrial ribosomal protein RPS13 [Diuris sulphurea]
          Length = 116

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 65/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GI  K +  +  +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MSYISGARSFPDSQVRIASTKMEGIAPKKAIQVRYRLGIRGNIKMTELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|58201997|gb|AAW67052.1| ribosomal protein S13 [Phytophthora infestans]
 gi|58202044|gb|AAW67098.1| ribosomal protein S13 [Phytophthora infestans]
          Length = 137

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 61/107 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINGFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
            ++ +VE  L++     +  L+++   RG+R  +GLPVRGQRTHTNA
Sbjct: 61  NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107


>gi|289808335|ref|ZP_06538964.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 42

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/34 (97%), Positives = 33/34 (97%)

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK
Sbjct: 1   IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRK 34


>gi|113170478|ref|YP_717269.1| Rps13 [Ostreococcus tauri]
 gi|112806885|emb|CAL36391.1| unnamed protein product [Ostreococcus tauri]
          Length = 116

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 54/91 (59%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I+GI    +  IC++L +     V  L   +  ++ + ++  Y  E DL++ V  N +R 
Sbjct: 22  IYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRILQYYYLTEHDLKKQVQGNFQRF 81

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + +GCYRG R  + LP+RGQRTHTNA+T K+
Sbjct: 82  IQIGCYRGFRVTQRLPLRGQRTHTNAKTAKR 112


>gi|238880236|gb|EEQ43874.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 122

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG+++++ +  K+ I P  R++QL E +++ + + I Q   VEG L+  +  +IK  
Sbjct: 24  IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKIINDIKMK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y G RH  G PVRGQRT TN  T ++  +
Sbjct: 83  RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116


>gi|68479427|ref|XP_716245.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|68479596|ref|XP_716162.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|46437820|gb|EAK97160.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|46437908|gb|EAK97247.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
          Length = 122

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG+++++ +  K+ I P  R++QL E +++ + + I Q   VEG L+  +  +IK  
Sbjct: 24  IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKINNDIKMK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y G RH  G PVRGQRT TN  T ++  +
Sbjct: 83  RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116


>gi|110816065|ref|YP_684397.1| ribosomal protein S13 [Oltmannsiellopsis viridis]
 gi|86450276|gb|ABC96355.1| ribosomal protein S13 [Oltmannsiellopsis viridis]
          Length = 117

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 1/90 (1%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           GIG K + +IC+KL +     +  L  +  I +   I   Y +   +RR    NI+RL+ 
Sbjct: 24  GIGPKKAIEICDKLGVASSMNLSSL-NAYQIHVLTGILNSYDIRHSVRRKKRENIQRLVR 82

Query: 84  LGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           +  YRG RH  GLP RGQRT TNA T +KF
Sbjct: 83  ISSYRGFRHTAGLPCRGQRTKTNANTARKF 112


>gi|30141209|emb|CAD30287.1| ribosomal protein S13 [Veratrum latifolium]
          Length = 114

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG   +  +  +L I    ++++L + ++ ++ + I
Sbjct: 1   MSYISGARLVPDEQVRIASTKIDGIG--PTIQVRYRLGISGNIKINELTKYQIDKMEEII 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTFRK 110


>gi|241959230|ref|XP_002422334.1| mitochondrial ribosomal protein of the small ribosomal subunit,
           putative [Candida dubliniensis CD36]
 gi|223645679|emb|CAX40340.1| mitochondrial ribosomal protein of the small ribosomal subunit,
           putative [Candida dubliniensis CD36]
          Length = 122

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG+++++ +  K+ I P  R++QL E +++ + + I Q   VEG L+  +  +IK  
Sbjct: 24  IFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ-LLVEGHLKHKINNDIKLK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +G Y G RH  G PVRGQRT TN  T ++  +
Sbjct: 83  RTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNR 116


>gi|70994567|ref|XP_752061.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293]
 gi|66849695|gb|EAL90023.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293]
 gi|159125025|gb|EDP50142.1| 40S ribosomal protein S13 [Aspergillus fumigatus A1163]
          Length = 169

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)

Query: 17  RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76
           ++L    G+G + S  +  +  I P  +V +L   +V+ +  A+  D ++E DLRR +  
Sbjct: 53  KSLETFFGVGPQVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIENDLRRQILD 111

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +IKRL + G YRG RH  GLPVRGQRT T A   K
Sbjct: 112 DIKRLKESGSYRGRRHALGLPVRGQRTRTQAENAK 146


>gi|255950082|ref|XP_002565808.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592825|emb|CAP99193.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 114

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
             GIG  SS  + ++  I P  RV +L   +V+ +  A+  + ++E DLRR V  +IKR+
Sbjct: 12  FFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDL-TAVLSEMKIENDLRREVLNDIKRM 70

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHT 105
            + G YRG RH  GLPVRGQRT T
Sbjct: 71  KETGTYRGRRHALGLPVRGQRTRT 94


>gi|186920119|ref|YP_001874773.1| ribosomal protein S13 [Hemiselmis andersenii]
 gi|186461065|gb|ACC78227.1| ribosomal protein S13 [Hemiselmis andersenii]
          Length = 113

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I  VN+   KRV   +  ++GIG   +   CN+L I  +  V  L ++ +  + + I
Sbjct: 1   MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           E Q+  V+  L+      I  L+D+  YRG+RH   LPVRGQRT TNAR+RK+
Sbjct: 61  EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRKR 113


>gi|119501002|ref|XP_001267258.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181]
 gi|119415423|gb|EAW25361.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181]
          Length = 118

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 10  PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
           P+   + ++L    G+G   S  +  +  I P  +V +L   +V+ +  A+  D ++E D
Sbjct: 9   PQLCMLTKSLETFFGVGPLVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIEND 67

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           LRR +  +IKRL + G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 68  LRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 113


>gi|326482074|gb|EGE06084.1| 40S ribosomal protein S13 [Trichophyton equinum CBS 127.97]
          Length = 200

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+
Sbjct: 82  MVFILGTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 141

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 142 -SNMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 195


>gi|327304315|ref|XP_003236849.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892]
 gi|326459847|gb|EGD85300.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892]
          Length = 147

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+
Sbjct: 29  MVFILGTSFPERQLVRKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 88

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 89  S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 142


>gi|289065187|ref|YP_003434239.1| ribosomal protein S13 [Chattonella marina]
 gi|288871899|dbj|BAI70586.1| ribosomal protein S13 [Chattonella marina]
          Length = 138

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 1/111 (0%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV-IQIRQAIEQ 62
           +   NIP   ++   L  I+G        +C ++ + P      L +S++ + ++   E 
Sbjct: 3   LLKTNIPLTNKLRTGLKKIYGFNDFFIYKMCKEIGLNPSLSFKNLKKSQIGLLLKWVNEN 62

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           +  +  +L++    N  RL+ +  YRGLRH+ GLP RGQRTHTN +T+++ 
Sbjct: 63  NLLINDELKKNQLDNKNRLITIKSYRGLRHKNGLPTRGQRTHTNRKTQRRL 113


>gi|238491704|ref|XP_002377089.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357]
 gi|220697502|gb|EED53843.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357]
          Length = 107

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           +++L    GIG   S  +  +  I P  +V +L   +V+ I  A+ +  ++E DLRR   
Sbjct: 1   MKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAALSE-MKIENDLRRQYL 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
            +IKRL + G YRG RH  GLPVRGQRT T
Sbjct: 60  DDIKRLKETGTYRGRRHALGLPVRGQRTRT 89


>gi|292559459|ref|YP_003540827.1| ribosomal protein S13 [Hartmannella vermiformis]
 gi|290775712|gb|ADD62211.1| ribosomal protein S13 [Hartmannella vermiformis]
          Length = 120

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I+G+G+  S  +  KL       +  L       +   +++ Y  E  L+R+V +NI++ 
Sbjct: 22  IYGLGYSKSFHLLEKLGFSRLAWMQSLNLYRFNSLIFFLKKFYMTENILKRSVYLNIQKK 81

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++L  Y G RH   LP+RGQRTHTNA+T
Sbjct: 82  INLNNYAGFRHISNLPIRGQRTHTNAKT 109


>gi|118431572|ref|NP_148134.2| 30S ribosomal protein S13P [Aeropyrum pernix K1]
 gi|32363509|sp|Q9YB60|RS13_AERPE RecName: Full=30S ribosomal protein S13P
 gi|116062897|dbj|BAA80738.2| 30S ribosomal protein S13P [Aeropyrum pernix K1]
          Length = 150

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAGV+I    ++   L  I GIG+ ++  +   L + PE++V  L E E+ ++ + +
Sbjct: 10  IVRIAGVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVL 69

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   DL    +        +I+R M +G +RG+RH+ GL V
Sbjct: 70  RDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYGLKV 129

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 130 RGQRTRTTGR 139


>gi|326472680|gb|EGD96689.1| 40S ribosomal protein S13 [Trichophyton tonsurans CBS 112818]
          Length = 124

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+  + +
Sbjct: 11  GTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGALS-NMK 69

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 70  IENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 119


>gi|300521596|gb|ADK26009.1| r-protein S13p [Candidatus Nitrososphaera gargensis]
          Length = 215

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           RIAG +I  +K+V+ A+  I GIG+  +Q +   L I P++RV  L +SE+ ++ QAI  
Sbjct: 13  RIAGKDIEGSKKVIVAVSEIKGIGYNFAQVLTQTLNINPDKRVGFLTDSELGELEQAIAH 72

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +  DL    + +I+R   +  +RG RH  GL VRG
Sbjct: 73  PDKAGVPAWYLNRRKNMDTGSNHHMITSDLDFASSNDIEREKMVMSWRGYRHMFGLRVRG 132

Query: 101 QRTHTNAR 108
           QRT T  R
Sbjct: 133 QRTRTTGR 140


>gi|289597069|ref|YP_003483765.1| ribosomal protein S13P [Aciduliprofundum boonei T469]
 gi|289534856|gb|ADD09203.1| ribosomal protein S13P [Aciduliprofundum boonei T469]
          Length = 148

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 29/146 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V+ A+  I GIG++ ++ I   L + P++++ +L + ++ +IR  I
Sbjct: 7   IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 66

Query: 61  EQ---------------DY---------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96
           E+               DY           E DL++   +N  RL  + CYRG+RH +GL
Sbjct: 67  EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDIN--RLKRIKCYRGVRHEKGL 124

Query: 97  PVRGQRTHTNARTRKKFGKGGVARKR 122
            VRGQRT +N R+       GV+RK+
Sbjct: 125 RVRGQRTRSNGRSGLTV---GVSRKK 147


>gi|254167094|ref|ZP_04873947.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|254167757|ref|ZP_04874607.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|197623285|gb|EDY35850.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|197623950|gb|EDY36512.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
          Length = 150

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 29/146 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V+ A+  I GIG++ ++ I   L + P++++ +L + ++ +IR  I
Sbjct: 9   IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 68

Query: 61  EQ---------------DY---------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96
           E+               DY           E DL++   +N  RL  + CYRG+RH +GL
Sbjct: 69  EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDIN--RLKRIKCYRGVRHEKGL 126

Query: 97  PVRGQRTHTNARTRKKFGKGGVARKR 122
            VRGQRT +N R+       GV+RK+
Sbjct: 127 RVRGQRTRSNGRSGLTV---GVSRKK 149


>gi|288871945|dbj|BAI70631.1| ribosomal protein S13 [Heterosigma akashiwo]
          Length = 126

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQ 65
            NI   + +   L  ++G+       +C +L +    +   + +S++  I + + E++  
Sbjct: 6   TNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDEKNVL 65

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           ++ DL++ V  N K+L+ +  YRG RH+ GLP RGQRTHTNART++K 
Sbjct: 66  IKDDLQKFVLDNKKQLIGIKTYRGSRHKEGLPTRGQRTHTNARTQRKL 113


>gi|239811649|gb|ACS27136.1| ribosomal protein S13 [Heterosigma akashiwo]
 gi|239811689|gb|ACS27175.1| ribosomal protein S13 [Heterosigma akashiwo]
          Length = 126

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQ 65
            NI   + +   L  ++G+       +C +L +    +   + +S++  I + + E++  
Sbjct: 6   TNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDEKNVL 65

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           ++ DL++ V  N K+L+ +  YRG RH+ GLP RGQRTHTNART++K 
Sbjct: 66  IKDDLQKFVLDNKKQLIAIKTYRGSRHKEGLPTRGQRTHTNARTQRKL 113


>gi|302908932|ref|XP_003049961.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730898|gb|EEU44248.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 119

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  +   +
Sbjct: 1   MVFILGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRG
Sbjct: 61  SQ-MTIETDARRQVQENIRRLKDMGSYRGRRHAMGLPVRG 99


>gi|20094907|ref|NP_614754.1| 30S ribosomal protein S13P [Methanopyrus kandleri AV19]
 gi|32363353|sp|Q8TVC1|RS13_METKA RecName: Full=30S ribosomal protein S13P
 gi|19888143|gb|AAM02684.1| Ribosomal protein S13 [Methanopyrus kandleri AV19]
          Length = 151

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 24/132 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV----------- 49
           + RIA V++   K+V  AL  I GIG + +  IC +L +  E+++ +L            
Sbjct: 9   IVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEI 68

Query: 50  ------ESEVIQIRQAIEQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96
                 ES +       ++DY+       V  +L  TV  +I RL  +  YRG+RH  GL
Sbjct: 69  KKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGL 128

Query: 97  PVRGQRTHTNAR 108
           PVRGQRT ++ R
Sbjct: 129 PVRGQRTKSSFR 140


>gi|116206296|ref|XP_001228957.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51]
 gi|88183038|gb|EAQ90506.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51]
          Length = 115

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 5/115 (4%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    +++V++    + +G +++  I  K +I P  ++  L    +  +   +
Sbjct: 1   MVFIFGVNF-NEQKLVKSF---YALGPQTADRILAKYSIYPGAKMGTLPPKTLTALTAEL 56

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR +  NIKRL D+G YRG RH  GLPVRGQRT     T +K  K
Sbjct: 57  ST-MNIESDARRVLQDNIKRLRDMGTYRGRRHAMGLPVRGQRTRNQIETARKLNK 110


>gi|50546092|ref|XP_500573.1| YALI0B06578p [Yarrowia lipolytica]
 gi|49646439|emb|CAG82804.1| YALI0B06578p [Yarrowia lipolytica]
          Length = 156

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 54/92 (58%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           + G+G   ++ +C K+ + P  R+ +L + +++ I + +  +  +E DL + +  +I+R 
Sbjct: 24  VFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKELSTNVTIESDLAKKINADIERK 83

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
              G Y G RH  G+PV+GQ+T TN +  ++F
Sbjct: 84  RKTGSYVGRRHVMGMPVKGQKTRTNGKNARRF 115


>gi|296805123|ref|XP_002843386.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480]
 gi|238844688|gb|EEQ34350.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480]
          Length = 118

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           + +AL    GIG      +  +  I P   V +L   +V+ +  A+  + ++E DL+R +
Sbjct: 14  IQKALRSFFGIGELRCNQLMARFHIHPTATVGELATRQVLDLTGALS-NMKIENDLKREI 72

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             NIKRL D G YRG RH   LPVRGQ T +  ++  KF +
Sbjct: 73  LDNIKRLKDTGTYRGRRHALNLPVRGQNTRSQIKSAIKFNR 113


>gi|240281197|gb|EER44700.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H143]
          Length = 101

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G+N P  + V +AL    GIG  +   +  +  +    ++  L   +V+ +  A+
Sbjct: 1   MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
            +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ
Sbjct: 61  SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQ 100


>gi|148643485|ref|YP_001273998.1| 30S ribosomal protein S13P [Methanobrevibacter smithii ATCC 35061]
 gi|222445016|ref|ZP_03607531.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350414|ref|ZP_05975831.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
 gi|158706442|sp|A5UN52|RS13_METS3 RecName: Full=30S ribosomal protein S13P
 gi|148552502|gb|ABQ87630.1| ribosomal protein S13p [Methanobrevibacter smithii ATCC 35061]
 gi|222434581|gb|EEE41746.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861197|gb|EFC93495.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
          Length = 147

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI+  ++   K + +AL  I G+G   S  +C  L +  E ++  + + +V++I + +
Sbjct: 8   LVRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEIL 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+       +E DL  T+  ++ R+     Y+G RH  GLPV
Sbjct: 68  ENPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPV 127

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R     G
Sbjct: 128 RGQRTKSTFRNSSSVG 143


>gi|91228970|ref|ZP_01262865.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01]
 gi|91187490|gb|EAS73827.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01]
          Length = 71

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60

Query: 61 EQDYQVEGDLRR 72
           + Y VEGDLRR
Sbjct: 61 AK-YTVEGDLRR 71


>gi|302348809|ref|YP_003816447.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
 gi|302329221|gb|ADL19416.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
          Length = 173

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  +IP    V+  L  I GIG+ ++  I  KL I P  R+  L    + ++  A+
Sbjct: 12  VVRIANTDIPGEDTVIYGLSRIKGIGYATALAIARKLGIDPTARIGYLQPDVIKRLEDAV 71

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  +L      +I R + +G +RG+RH+ G  V
Sbjct: 72  NDLTRLSLPSWLYNRRKDYESGQDKHLVGAELIFVARRDIDREIKIGSWRGVRHKLGYKV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ+THT  RT    G
Sbjct: 132 RGQKTHTTGRTGMTVG 147


>gi|213612286|ref|ZP_03370112.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 79

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKR 80
           + + VEGDLRR ++M+IKR
Sbjct: 61 AK-FVVEGDLRREISMSIKR 79


>gi|330929276|ref|XP_003302579.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1]
 gi|311321985|gb|EFQ89344.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1]
          Length = 92

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 36  KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
           K  I P  +V  L  S ++ +   +  + ++E DLRR V  +I+RL D+G YRG RH  G
Sbjct: 3   KFYIHPWAKVGSLKNSTLLDLTAELA-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMG 61

Query: 96  LPVRGQRTHTNARTRKKFGK---GGVAR 120
           LPVRGQ+T T   T ++  K   GG  R
Sbjct: 62  LPVRGQKTRTQITTARRLNKVERGGTGR 89


>gi|48478291|ref|YP_023997.1| 30S ribosomal protein S13P [Picrophilus torridus DSM 9790]
 gi|74567419|sp|Q6KZP8|RS13_PICTO RecName: Full=30S ribosomal protein S13P
 gi|48430939|gb|AAT43804.1| small subunit ribosomal protein S13P [Picrophilus torridus DSM
           9790]
          Length = 158

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG + S+ I  KL + P++R+ +L E ++ ++R+ I
Sbjct: 14  IVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYI 73

Query: 61  E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                     +D+  V  DL   +  +I  +  +  Y+G+RH RGL V
Sbjct: 74  EGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKV 133

Query: 99  RGQRTHTNAR 108
           RGQR  +N R
Sbjct: 134 RGQRMRSNGR 143


>gi|149235401|ref|XP_001523579.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|149248956|ref|XP_001528820.1| hypothetical protein LELG_05785 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452988|gb|EDK47244.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453348|gb|EDK47604.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 122

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG K +  +  ++ I P  +V+QL E +++++ + I Q   VEG L++ +  +I+  
Sbjct: 24  IFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNKEISQ-LTVEGHLKQKINSDIQMK 82

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +    G+RH +G PVRGQ+T TN  T ++  K
Sbjct: 83  RAINSRAGIRHAQGFPVRGQKTKTNGATARRLNK 116


>gi|124027412|ref|YP_001012732.1| 30S ribosomal protein S13P [Hyperthermus butylicus DSM 5456]
 gi|158706239|sp|A2BK76|RS13_HYPBU RecName: Full=30S ribosomal protein S13P
 gi|123978106|gb|ABM80387.1| 30S ribosomal protein S13p [Hyperthermus butylicus DSM 5456]
          Length = 151

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP   +V   L  + GIG   +  +C  L I P +R+  L ++E+ +I +A+
Sbjct: 10  IVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAM 69

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  ANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKV 129

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT T  R     G
Sbjct: 130 RGQRTATTGRIGMTIG 145


>gi|327400269|ref|YP_004341108.1| 30S ribosomal protein S13P [Archaeoglobus veneficus SNP6]
 gi|327315777|gb|AEA46393.1| ribosomal protein S13P [Archaeoglobus veneficus SNP6]
          Length = 147

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K V+ AL  I GIG + ++ I + L I   +++ ++ +  + ++R+ +
Sbjct: 7   IVRIADTDLDGSKSVMFALTGIKGIGLRMAKSIVSALGIDGRQKLGEMDDETIEKLRKFV 66

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E+D +                     +  D+     ++I+ ++ + CYRG+RH RG  VR
Sbjct: 67  EEDIESLPSWLLNRRKDPHTGKDLHLLSKDVDFAKMVDIETMIRMKCYRGIRHARGKKVR 126

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R+ +  G
Sbjct: 127 GQRTRSTGRSGRTVG 141


>gi|331250171|ref|XP_003337697.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309316687|gb|EFP93278.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 203

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 62/156 (39%), Gaps = 44/156 (28%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI-----------------------P 40
           I GVN+P  K V   L    GIG  ++  IC +L I                       P
Sbjct: 3   ILGVNLPEHKLVRIGLTRFVGIGHYTANLICARLQIHKALTVGELSEHQIGRLSALLSSP 62

Query: 41  PERRV--HQLVESEVIQIRQAIEQD-------------------YQVEGDLRRTVAMNIK 79
           P      H++ E + I     ++ D                     +E DLRR V  NI 
Sbjct: 63  PTTPPTNHKVAELDGIPAPSTLDFDSGPSPQPKLLSLADDPLQRLLIESDLRREVRANIA 122

Query: 80  RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
               +G Y+G RH  G PV GQRTHTNA+T +K  K
Sbjct: 123 HHRAIGSYKGKRHALGFPVNGQRTHTNAKTARKLNK 158


>gi|297527615|ref|YP_003669639.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
 gi|297256531|gb|ADI32740.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
          Length = 157

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG +I  + + V  L  I G+G   +  IC +L I PE R+  L + E+ +I   +
Sbjct: 16  IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 75

Query: 61  E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    D+          V  +I+R   +  +RG+RH  GL V
Sbjct: 76  SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 135

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 136 RGQRTRTTGR 145


>gi|126465712|ref|YP_001040821.1| 30S ribosomal protein S13P [Staphylothermus marinus F1]
 gi|158706279|sp|A3DMQ3|RS13_STAMF RecName: Full=30S ribosomal protein S13P
 gi|126014535|gb|ABN69913.1| SSU ribosomal protein S13P [Staphylothermus marinus F1]
          Length = 151

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG +I  + + V  L  I G+G   +  IC +L I PE R+  L + E+ +I   +
Sbjct: 10  IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 69

Query: 61  E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    D+          V  +I+R   +  +RG+RH  GL V
Sbjct: 70  SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 129

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 130 RGQRTRTTGR 139


>gi|39961431|ref|XP_364684.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15]
 gi|145011032|gb|EDJ95688.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15]
          Length = 119

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL     +G + S  I  K  I P  ++  L    +  +   +
Sbjct: 1   MVLILGVNFHEQKLVRKALESFWNLGPQKSARILAKYCIHPMAKLGTLPPKTITALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E + ++ V  NI+RL D+G YRG RH   LPVRGQ+T     T +K  +
Sbjct: 61  S-TMNIENEAKKVVLDNIRRLRDMGTYRGRRHAMHLPVRGQQTKNQTETARKLNQ 114


>gi|296109383|ref|YP_003616332.1| ribosomal protein S13P [Methanocaldococcus infernus ME]
 gi|295434197|gb|ADG13368.1| ribosomal protein S13P [Methanocaldococcus infernus ME]
          Length = 153

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI+  +I   K+V+ AL  I+GIG   ++ I     I P +    L + EV +I + +
Sbjct: 12  LIRISRTDIDGNKKVIMALQDIYGIGEAMARAIVRVTNIDPNKLAGYLTDEEVKKIEEVL 71

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 E  + +EGDL      +I RL  + CYRG+RH  GLP 
Sbjct: 72  QDPAKFGIPSWMFNRRKDYVTGEDKHVIEGDLIVVKQEDINRLKRIKCYRGIRHELGLPC 131

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 132 RGQRTKSTFR 141


>gi|169837741|ref|ZP_02870929.1| 30S ribosomal protein S13 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 53

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/35 (80%), Positives = 30/35 (85%)

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           NIKRL D+  YRGLRH+ GLPVRGQRT TNARTRK
Sbjct: 2   NIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRK 36


>gi|315045402|ref|XP_003172076.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893]
 gi|311342462|gb|EFR01665.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893]
          Length = 118

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 17  RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76
           +AL    GIG      +  +  I P   V +L   +V+ +  A+  + ++E DL+R +  
Sbjct: 16  KALRSFFGIGELRCSQLMARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILD 74

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 75  NIKRLKSTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 113


>gi|288931231|ref|YP_003435291.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642]
 gi|288893479|gb|ADC65016.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642]
          Length = 147

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K +V AL  I GIG + ++ I N L +    ++  L + E+ ++++ +
Sbjct: 7   IVRIADTDLDGNKPLVHALTGIKGIGLRMARAITNHLGLNAREKLGNLSDEEIEKLKKFV 66

Query: 61  EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E+                    D  + G D+     ++I+RL+ +  YRG+RH +G  VR
Sbjct: 67  EENIEELPSWMLNRRKDLYTGKDLHLLGKDVDLAKKLDIERLIKIRAYRGIRHAKGYKVR 126

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT +  G
Sbjct: 127 GQRTRSTGRTGQTVG 141


>gi|76780570|emb|CAD92015.1| mitochondrial ribosomal protein RPS13 [Paris quadrifolia]
          Length = 116

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 61/112 (54%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG   +  +  +L +    ++++L +  + Q+ Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTNIDGIGPTKAILVRYRLGVSGNIKMNELTKYHIDQLEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+    +L+R    ++ RL+ +  YRG+ H+ G P+RG RTHTNA T +K
Sbjct: 61  GQDHVGHWELKRGERADLDRLISISRYRGIHHQDGSPLRGHRTHTNAGTFRK 112


>gi|14591411|ref|NP_143491.1| 30S ribosomal protein S13P [Pyrococcus horikoshii OT3]
 gi|6226061|sp|O74021|RS13_PYRHO RecName: Full=30S ribosomal protein S13P
 gi|3258070|dbj|BAA30753.1| 148aa long hypothetical 30S ribosomal protein S13 [Pyrococcus
           horikoshii OT3]
          Length = 148

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL    A        +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 127 RGQRTRSNFR 136


>gi|213402553|ref|XP_002172049.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces
          japonicus yFS275]
 gi|212000096|gb|EEB05756.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces
          japonicus yFS275]
          Length = 142

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          M  + GV++P  K V  AL   +GIG  +++ IC +L+     ++  L E+++ ++ Q I
Sbjct: 1  MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQ-I 59

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
               +E DL+R V  NI R + +  Y+GLRH  G
Sbjct: 60 LNGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94


>gi|14520743|ref|NP_126218.1| 30S ribosomal protein S13P [Pyrococcus abyssi GE5]
 gi|32363436|sp|Q9V1A0|RS13_PYRAB RecName: Full=30S ribosomal protein S13P
 gi|5457959|emb|CAB49449.1| rps13P SSU ribosomal protein S13P/S18E [Pyrococcus abyssi GE5]
          Length = 148

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL    A        +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147


>gi|226292588|gb|EEH48008.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb18]
          Length = 157

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           ++AL    GIG  +   +  +  +    ++  L   +++ +  A+ +  ++E DLRR + 
Sbjct: 48  MKALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQIL 106

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +I+RL D+G  RG RH  GLPVRGQRT +  +T  K  +
Sbjct: 107 DDIQRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNR 146


>gi|332157867|ref|YP_004423146.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
 gi|331033330|gb|AEC51142.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
          Length = 148

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + ++ +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEIL 66

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL    A        +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVAHGIPRWAVNRPKDYETGKDLHLITAKLEMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 127 RGQRTRSNFR 136


>gi|18978022|ref|NP_579379.1| 30S ribosomal protein S13P [Pyrococcus furiosus DSM 3638]
 gi|32363354|sp|Q8U0E2|RS13_PYRFU RecName: Full=30S ribosomal protein S13P
 gi|18893805|gb|AAL81774.1| SSU ribosomal protein S13P [Pyrococcus furiosus DSM 3638]
          Length = 148

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   DL    A        +I RL  +  YRG+RH  GLPV
Sbjct: 67  ADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147


>gi|167044121|gb|ABZ08804.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
           HF4000_APKG5C13]
          Length = 208

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP  ++++  L  I G+G+  +  I N L I P +R+  L   +V  I   I
Sbjct: 8   LVRIVGNDIPGERKMIVGLTQIRGVGYMFANTILNLLKINPNQRIGYLSLEQVKSIESII 67

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 E  + +  D+  TV  +I+R    G +RG+RH  GL V
Sbjct: 68  KNPSASNFPSWFLNRRKDVETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKV 127

Query: 99  RGQRTHTNAR 108
           RGQRT    R
Sbjct: 128 RGQRTRCTGR 137


>gi|288560162|ref|YP_003423648.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1]
 gi|288542872|gb|ADC46756.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1]
          Length = 149

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI+  ++   K + +AL  I G+G   S+ IC  L +    ++  + E +V +I   +
Sbjct: 8   LVRISRKDVDGNKTIEQALTQIKGVGLSLSRSICLTLGLNTTDKIGYISEDDVTKIEDLL 67

Query: 61  E--QDYQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E  Q+Y +                    E DL  T+  ++ R+     Y+G RH  GLPV
Sbjct: 68  ENPQNYSIPDWMLNRRKDYATGDDLHLIESDLDMTLRDDLNRMKKTRSYKGRRHEVGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +  R        GV+R R
Sbjct: 128 RGQRTKSTFRHSSTV---GVSRSR 148


>gi|41615251|ref|NP_963749.1| 30S ribosomal protein S13P [Nanoarchaeum equitans Kin4-M]
 gi|74579692|sp|Q74M95|RS13_NANEQ RecName: Full=30S ribosomal protein S13P
 gi|40068975|gb|AAR39310.1| NEQ467 [Nanoarchaeum equitans Kin4-M]
          Length = 153

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +  IA V++   K +   L  + G+ +  +  +C  L I   R++  L + E+ ++  A+
Sbjct: 13  IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              ++                      V  D + T+  +IKR M +  +RG RHR GLPV
Sbjct: 73  RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT ++ R  +  G
Sbjct: 133 RGQRTRSHHRKGRTVG 148


>gi|284162135|ref|YP_003400758.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
 gi|284012132|gb|ADB58085.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
          Length = 146

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K V+ AL  I GIG + ++ I + L + P  ++ +L +  + ++R+ +
Sbjct: 5   IVRIADTDLDGNKPVMIALTGIKGIGLRMAKAITSALGLNPRAKLGELDDETIERLRKLV 64

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E++ +                      +  D+     ++I++++ + CYRG+RH +G  V
Sbjct: 65  EEELEQHIPSWMFNRRKDPYSGKDLHLLSKDVDFAKMLDIEKMIKIKCYRGVRHAKGYKV 124

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 125 RGQRTRSTGR 134


>gi|146420609|ref|XP_001486259.1| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 77

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           R++QL E +++ I + +  D  VEG L++ +  +IK    +G Y GLRH  GLPVRGQRT
Sbjct: 2   RMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGLRHASGLPVRGQRT 60

Query: 104 HTNARTRKKFGK 115
             N+ T ++  +
Sbjct: 61  RNNSSTARRLNR 72


>gi|170088480|ref|XP_001875463.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650663|gb|EDR14904.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 112

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN+P       AL   +GIG K++  +C +L +  + +V  L   +V  +   +
Sbjct: 1   MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                      R +  NI     +G Y G RH   LPVRGQ T +NA+T KK  +
Sbjct: 61  SAP-------AREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQ 108


>gi|297601533|ref|NP_001051020.2| Os03g0704000 [Oryza sativa Japonica Group]
 gi|255674816|dbj|BAF12934.2| Os03g0704000 [Oryza sativa Japonica Group]
          Length = 203

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKVTKDLSEEEVITLRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRG 89
            Y +EGDL+R   + I+RL ++ CYR 
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRA 132


>gi|212223248|ref|YP_002306484.1| 30S ribosomal protein S13P [Thermococcus onnurineus NA1]
 gi|212008205|gb|ACJ15587.1| SSU ribosomal protein S13P [Thermococcus onnurineus NA1]
          Length = 149

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     I P  +   L + +V +I + +
Sbjct: 8   IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEEIL 67

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+    A        +I RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPTWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 128 RGQRTRSNFR 137


>gi|1071882|dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
          Length = 90

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 52/90 (57%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          M+ I+G  +   K+V  A   I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1  MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90
           QD+ V  +L+R    +I+RL+ + CYRG+
Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGI 90


>gi|301500973|ref|YP_003795438.1| ribosomal protein S13 [Alveolata sp. CCMP3155]
 gi|300069519|gb|ADJ66626.1| ribosomal protein S13 [Chromerida sp. RM11]
          Length = 127

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 1/112 (0%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+ GV +P ++ +  AL  + GI    +  +  +  + P+RRV  L   +V Q+R +   
Sbjct: 16  RLEGVLLPSSQHIKHALTNLKGIQHGRASILLLRARLNPKRRVGLLTNEQVKQLRTSFSN 75

Query: 63  -DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             +  E  L R+  ++ +RL +    RG+R RR L  RGQRT  N +T K+F
Sbjct: 76  ASFSTENVLMRSFFLSKQRLYEARLIRGVRLRRRLTNRGQRTKNNNKTIKRF 127


>gi|315229892|ref|YP_004070328.1| 30S ribosomal protein S18e (S13p) [Thermococcus barophilus MP]
 gi|315182920|gb|ADT83105.1| SSU ribosomal protein S18e (S13p) [Thermococcus barophilus MP]
          Length = 148

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +C    + P ++   L + +V  I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVCRVAGLDPFQKAGYLTDEQVKLIEEIL 66

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+    A        +I RL  +  YRG+RH  GLP+
Sbjct: 67  EDPVKHGIPPWAVNRPKDYETGRDMHLIGAKLVMAWREDINRLRRIRAYRGIRHELGLPL 126

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 127 RGQRTRSNFR 136


>gi|57641441|ref|YP_183919.1| 30S ribosomal protein S13P [Thermococcus kodakarensis KOD1]
 gi|73917914|sp|Q5JJF1|RS13_PYRKO RecName: Full=30S ribosomal protein S13P
 gi|57159765|dbj|BAD85695.1| SSU ribosomal protein S13P [Thermococcus kodakarensis KOD1]
          Length = 149

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV+I   K+V  AL  I GIG   +  +     I P  +   L + +V +I + +
Sbjct: 8   IVRVAGVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEIL 67

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   D+    A        ++ RL  +  YRG+RH  GLPV
Sbjct: 68  ADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPV 127

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 128 RGQRTRSNFR 137


>gi|238601365|ref|XP_002395391.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553]
 gi|215466046|gb|EEB96321.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553]
          Length = 162

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +E +LRR +  NI R   +G Y GLRH  GLPVRGQ T TNA+T KK  +
Sbjct: 109 IETELRRQIRENIHRQRSIGSYVGLRHAMGLPVRGQNTQTNAKTAKKLNR 158


>gi|11499866|ref|NP_071110.1| 30S ribosomal protein S13P [Archaeoglobus fulgidus DSM 4304]
 gi|6226060|sp|O27999|RS13_ARCFU RecName: Full=30S ribosomal protein S13P
 gi|2648238|gb|AAB88972.1| SSU ribosomal protein S13P (rps13P) [Archaeoglobus fulgidus DSM
           4304]
          Length = 146

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K ++ AL  I GIG ++++ I N+L +    ++ +L +  + ++++ +
Sbjct: 6   IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E++ +                     +  D+     ++I+RL+ +  YRG+RH RG  VR
Sbjct: 66  EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R  +  G
Sbjct: 126 GQRTRSTGRKGRTVG 140


>gi|110225694|ref|YP_665699.1| ribosomal protein S13 [Mesostigma viride]
 gi|17222565|gb|AAL36738.1|AF353999_18 ribosomal protein S13 [Mesostigma viride]
          Length = 116

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 22  IHGIGFKSSQDICNKLAI----PPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           + G+G K+S  IC  + +     P+     +++S  +Q R        +   L   + +N
Sbjct: 22  VFGLGKKNSIQICRSMGLHERMSPKMSSKFILDS--LQERLETSLGNSLGAPLINRIHLN 79

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKK 112
            +RL+ +  YRG RH RGLP RGQRT TNART RKK
Sbjct: 80  KERLIKISSYRGFRHHRGLPARGQRTRTNARTCRKK 115


>gi|257076680|ref|ZP_05571041.1| 30S ribosomal protein S13P [Ferroplasma acidarmanus fer1]
          Length = 159

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  +I   +R+   L  I+G+G + +  +  KL +   R++  L E EV++IR+ +
Sbjct: 14  IVRIANKDIRGERRMDLGLADINGVGERLANILIKKLNLDRNRQIGDLSEDEVLEIRKYV 73

Query: 61  E-QDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E ++Y+                     +  DL   +  +I  +  +  YRGLRH +G  V
Sbjct: 74  ESKEYEGMPVWLLNHRKDVATGKNFNLLSNDLILKINDDINLMKKMRSYRGLRHEQGHKV 133

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 134 RGQRTRSNGR 143


>gi|190345872|gb|EDK37832.2| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 77

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           R++QL E +++ I + +  D  VEG L++ +  +IK    +G Y G RH  GLPVRGQRT
Sbjct: 2   RMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGSRHASGLPVRGQRT 60

Query: 104 HTNARTRKKFGK 115
             N+ T ++  +
Sbjct: 61  RNNSSTARRLNR 72


>gi|242398330|ref|YP_002993754.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
 gi|242264723|gb|ACS89405.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
          Length = 156

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A V+I   K++  AL  I GIG   +  IC    + P+ +   L E +V  I   +
Sbjct: 15  IVRVANVDIDGHKQLRLALTGIRGIGVNFATVICRIAGLDPKMKAGYLTEEQVKAIEAVL 74

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+    A        ++ RL  +  YRG+RH  GLP+
Sbjct: 75  EDPAKHGLPSWILNRPKDYEQGRDMHLIGAKLVMAWREDVNRLRKIRAYRGIRHELGLPL 134

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 135 RGQRTRSNFR 144


>gi|11466590|ref|NP_066480.1| ribosomal protein S13 [Rhodomonas salina]
 gi|10444177|gb|AAG17751.1|AF288090_27 ribosomal protein S13 [Rhodomonas salina]
          Length = 102

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          M RI    + R K V  AL  I G+G    + +CNK  I    +V  L + +VI I + I
Sbjct: 1  MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60

Query: 61 EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
          +Q+   VE  L+  V  +IKRL+ + C+RG  H++
Sbjct: 61 DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK 95


>gi|297790005|ref|XP_002862918.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308691|gb|EFH39177.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 60

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 31/40 (77%)

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           R V   I+RL+++ CYRG RHR G+P RGQRT TNART+K
Sbjct: 6   RRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKK 45


>gi|254172984|ref|ZP_04879658.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4]
 gi|214033140|gb|EEB73968.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4]
          Length = 149

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     I P  +   L + +V  I + +
Sbjct: 8   IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKLIEKIL 67

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+    A        ++ RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 128 RGQRTRSNFR 137


>gi|303389678|ref|XP_003073071.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302215|gb|ADM11711.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
           50506]
          Length = 153

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   KR+  AL  I G+G + S  IC +L I  +RR  ++ E E+ +I  AI
Sbjct: 13  IVRIHNTNIDGTKRIAFALTKIRGVGIRISTAICKRLGIDLKRRAGEMSEEEMKRISDAI 72

Query: 61  --------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR--------GLPV 98
                          Q   V+G     +   +   + +   RG +++R        GL V
Sbjct: 73  LDPASLGIPESYLNHQKDPVDGTTSHLIGTKLDADLRMMIERGKKNKRIRACRLDVGLKV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  K     GV+RK+
Sbjct: 133 RGQRTKSNGRRGKSM---GVSRKK 153


>gi|327311848|ref|YP_004338745.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20]
 gi|326948327|gb|AEA13433.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20]
          Length = 156

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 26/144 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++  AK V  AL  I GIG  S+  IC +L + P   +  L E ++ ++  A+
Sbjct: 7   IVRVGDTDLEGAKAVAFALARIKGIGISSAFAICRRLGVDPYAPLGSLSEEQISKLDWAV 66

Query: 61  EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              +++                       +L      +I  +  L  ++G+RH  GL VR
Sbjct: 67  RNLHEIAPAWFLNRRRDPVSGRDVHLIGSELILAAKSDIDLMKKLRSWKGMRHAAGLKVR 126

Query: 100 GQRTHTNARTRKKFG-KGGVARKR 122
           GQRT T  R    FG   GVA+K+
Sbjct: 127 GQRTVTTGR----FGPTAGVAKKK 146


>gi|240104026|ref|YP_002960335.1| 30S ribosomal protein S13P [Thermococcus gammatolerans EJ3]
 gi|239911580|gb|ACS34471.1| SSU ribosomal protein S13P (rps13P) [Thermococcus gammatolerans
           EJ3]
          Length = 149

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     + P  +   L + +V  I + +
Sbjct: 8   IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGLDPYMKAGYLTDEQVKLIEKIL 67

Query: 61  E---------------QDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+    A        +I RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNAR 108
           RGQRT +N R
Sbjct: 128 RGQRTRSNFR 137


>gi|256810446|ref|YP_003127815.1| ribosomal protein S13P [Methanocaldococcus fervens AG86]
 gi|256793646|gb|ACV24315.1| ribosomal protein S13P [Methanocaldococcus fervens AG86]
          Length = 150

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R++  ++   K+++ AL  I+G+G   ++ I     + P++    L + EV +I + +
Sbjct: 9   LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTDEEVKKIEEIL 68

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 E  + +E DL      +I RL  + CYRG+RH  GLP 
Sbjct: 69  ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMVVKQEDINRLKRVRCYRGIRHELGLPC 128

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 129 RGQRTKSTFR 138


>gi|200004049|ref|YP_002221383.1| ribosomal protein S13 [Blastocystis sp. NandII]
 gi|198385471|gb|ACH86064.1| ribosomal protein S13 [Blastocystis sp. NandII]
          Length = 115

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ-AIEQDYQVEGDLRRT 73
           ++  L  I+GI  + ++ I   L I     V+ L +  + QI +  I+++Y +  DL+  
Sbjct: 15  LILVLNKIYGINTEQAKYILKNLGINTNISVNDLTQPLLKQINEFLIKKNYIINKDLQYK 74

Query: 74  VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
              NIK    +  Y+G R +  LP  GQ TH+N +T KK
Sbjct: 75  TNNNIKFKSLINTYKGFRLKNKLPCHGQNTHSNGKTAKK 113


>gi|325967787|ref|YP_004243979.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28]
 gi|323706990|gb|ADY00477.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28]
          Length = 158

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC  L I P  R+ QL +  V ++  A+
Sbjct: 8   IVRIGDTDLDGFKPVAYALTKIRGIGIPTAYAICRYLGINPLIRLGQLDDETVRKLDWAV 67

Query: 61  EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              YQ                        DL      +I  +  L  ++G+RH  GL VR
Sbjct: 68  RNLYQFAPGWFVNRPKDPETGRNVHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127

Query: 100 GQRTHTNAR 108
           GQRT T  R
Sbjct: 128 GQRTRTTGR 136


>gi|119719177|ref|YP_919672.1| 30S ribosomal protein S13P [Thermofilum pendens Hrk 5]
 gi|158706292|sp|A1RWT9|RS13_THEPD RecName: Full=30S ribosomal protein S13P
 gi|119524297|gb|ABL77669.1| SSU ribosomal protein S13P [Thermofilum pendens Hrk 5]
          Length = 157

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 22/120 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++P  K +V AL  I GIG  ++Q +  KL + P R +  L E EV ++  A+
Sbjct: 8   IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
            +                       + +  DL  TV  +I+ +  +  Y+G+RH  GL V
Sbjct: 68  REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127


>gi|126459585|ref|YP_001055863.1| 30S ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548]
 gi|158706268|sp|A3MUT0|RS13_PYRCJ RecName: Full=30S ribosomal protein S13P
 gi|126249306|gb|ABO08397.1| SSU ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548]
          Length = 153

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 28/145 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67

Query: 61  --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99
                          +D +   DL      + +  KR +D    L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127

Query: 100 GQRTHTNAR-------TRKKFGKGG 117
           GQRT T  R       T+KK   GG
Sbjct: 128 GQRTVTTGRFGATAGVTKKKAAPGG 152


>gi|18313810|ref|NP_560477.1| 30S ribosomal protein S13P [Pyrobaculum aerophilum str. IM2]
 gi|32363374|sp|Q8ZTV0|RS13_PYRAE RecName: Full=30S ribosomal protein S13P
 gi|18161371|gb|AAL64659.1| ribosomal protein S13 [Pyrobaculum aerophilum str. IM2]
          Length = 152

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 26/144 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I GIG  S+  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAV 67

Query: 61  --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99
                          +D +   DL      + +  KR +D    L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFG-KGGVARKR 122
           GQRT T  R    FG   GV +K+
Sbjct: 128 GQRTVTTGR----FGATAGVTKKK 147


>gi|200004021|ref|YP_002221356.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328]
 gi|198385445|gb|ACH86039.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328]
          Length = 116

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I+GI    ++ I + L   P  ++  L  + +      + + Y +  DL      N K+ 
Sbjct: 22  IYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQFENNKKQK 81

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           + L  Y G+R +  LP  GQ TH+NA T KK  
Sbjct: 82  ILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKLN 114


>gi|328874052|gb|EGG22418.1| protein serine/threonine phosphatase [Dictyostelium fasciculatum]
          Length = 2108

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   N+   ++V+ AL  + G G + +  +C K  I   +R  +L  +E+ ++   +  
Sbjct: 391 RIYNTNVEGKRKVMYALTDVKGCGRRFANLVCKKADIDFSKRAGELSPAEIERVTTIMNH 450

Query: 63  DYQ--------------VEGDLRRTVA--MNIK------RLMDLGCYRGLRHRRGLPVRG 100
             Q              V+G   + ++  ++IK      RL  + C RG+RH  GL VRG
Sbjct: 451 PRQYNIPSWFLNRQRDIVDGKYMQALSNVLDIKLREDLERLKKIRCQRGIRHHLGLKVRG 510

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q+T T  R  +     GVA+K+
Sbjct: 511 QKTKTTGRRGRTV---GVAKKK 529


>gi|121706874|ref|XP_001271657.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1]
 gi|119399805|gb|EAW10231.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1]
          Length = 57

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 33/51 (64%)

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 2   KIENDLRRQVLDDIKRLKETGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 52


>gi|300121915|emb|CBK22489.2| unnamed protein product [Blastocystis hominis]
          Length = 163

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 27/145 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++V AL  I GIG + +  +C K  I   RR  +L   E+ ++   I
Sbjct: 23  ILRVLNTNIDGKQKIVYALTSIKGIGRRFAMAVCKKAEIDISRRAGELSNDEIEKLIAVI 82

Query: 61  EQDYQVE--------------GDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
               Q +              G  R+ V+ N++        RL  +   RGLRH   L V
Sbjct: 83  STPLQFDIPEWFLNRQKDVETGKYRQVVSNNLQANLREDLNRLKKMRANRGLRHYWNLKV 142

Query: 99  RGQRTHTNARTRKKFGKG-GVARKR 122
           RGQ T T  R    FGK  GV+ K+
Sbjct: 143 RGQHTKTTGR----FGKSVGVSTKK 163


>gi|154279122|ref|XP_001540374.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150412317|gb|EDN07704.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|225562357|gb|EEH10636.1| 40S ribosomal protein S13 [Ajellomyces capsulatus G186AR]
          Length = 92

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           ++  L   +V+ +  A+ +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ T
Sbjct: 11  KIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNT 69

Query: 104 HTNARTRKKFGK 115
            +  +T  K  K
Sbjct: 70  RSQIKTAIKLNK 81


>gi|242219975|ref|XP_002475760.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia
           placenta Mad-698-R]
 gi|220725032|gb|EED79039.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia
           placenta Mad-698-R]
          Length = 169

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 50/165 (30%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV +P  +    AL + +GIG K++  +C ++ I    +V  L  +++  +   +
Sbjct: 1   MVHILGVLLPDTQLAKFALTHFYGIGHKTAHRLCARVQIHETCKVRDLTSNQITALTAFL 60

Query: 61  EQ--------------------------------------------------DYQVEGDL 70
                                                               + ++E +L
Sbjct: 61  SSPSTQPSLPRYTLATSNYVPPRVGEPVPENAATITSADGAPVKESLGDRLRNIKIESEL 120

Query: 71  RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           RR +  NI     +G Y G RH  GLPVRGQ T TNA+T KK  +
Sbjct: 121 RREIRENIAHQRMIGSYVGRRHAMGLPVRGQNTQTNAKTAKKLNR 165


>gi|213646546|ref|ZP_03376599.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
          Length = 71

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRR 72
           + + VEGDLRR
Sbjct: 61 AK-FVVEGDLRR 71


>gi|307595928|ref|YP_003902245.1| 30S ribosomal protein S13P [Vulcanisaeta distributa DSM 14429]
 gi|307551129|gb|ADN51194.1| ribosomal protein S13P [Vulcanisaeta distributa DSM 14429]
          Length = 160

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC  L I P  R+ QL +  V ++  A+
Sbjct: 8   IVRIGDTDLDGFKPVAYALTKIRGIGISTAYAICRYLGINPSIRLGQLDDETVRKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              +Q                     +  DL      +I  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHQFAPGWFVNRPKDPETGRNIHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127

Query: 100 GQRTHTNAR 108
           GQRT T  R
Sbjct: 128 GQRTRTTGR 136


>gi|261201520|ref|XP_002627160.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081]
 gi|239592219|gb|EEQ74800.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081]
 gi|239611623|gb|EEQ88610.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ER-3]
 gi|327357911|gb|EGE86768.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ATCC 18188]
          Length = 92

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           ++  L   +V+ +  A+ +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ T
Sbjct: 11  KIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLRDTGTTRGRRHALGLPVRGQNT 69

Query: 104 HTNARTRKKFGK 115
            +  +T  K  K
Sbjct: 70  RSQIKTAIKLNK 81


>gi|119872422|ref|YP_930429.1| 30S ribosomal protein S13P [Pyrobaculum islandicum DSM 4184]
 gi|158706269|sp|A1RT04|RS13_PYRIL RecName: Full=30S ribosomal protein S13P
 gi|119673830|gb|ABL88086.1| SSU ribosomal protein S13P [Pyrobaculum islandicum DSM 4184]
          Length = 153

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 28/145 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  +L  I GIG  ++  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAV 67

Query: 61  --------------EQDYQVEGDLR---RTVAMNIKRLMD----LGCYRGLRHRRGLPVR 99
                          +D +   DL      + +  KR +D    L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGKDLHLIGAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNAR-------TRKKFGKGG 117
           GQRT T  R       T+KK   GG
Sbjct: 128 GQRTVTTGRLGPVAGVTKKKAAAGG 152


>gi|171185873|ref|YP_001794792.1| 30S ribosomal protein S13P [Thermoproteus neutrophilus V24Sta]
 gi|170935085|gb|ACB40346.1| ribosomal protein S13 [Thermoproteus neutrophilus V24Sta]
          Length = 153

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 28/145 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I GIG  ++  IC KL I P   +  L + ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYALAKIRGIGIATAYAICWKLGIDPHAVLGMLTDDQINKLDWAV 67

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                 + + +  +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLNELAPAWFLNRRKDPETGRELHLIGSELVLAAKKDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNAR-------TRKKFGKGG 117
           GQRT T  R       T+KK   GG
Sbjct: 128 GQRTVTTGRFGATAGVTKKKAAAGG 152


>gi|13541393|ref|NP_111081.1| 30S ribosomal protein S13P [Thermoplasma volcanium GSS1]
 gi|32363380|sp|Q97B96|RS13_THEVO RecName: Full=30S ribosomal protein S13P
 gi|14324776|dbj|BAB59703.1| ribosomal protein small subunit S18 [Thermoplasma volcanium GSS1]
          Length = 171

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG +    I  +L + P +++ +L E E+ ++++ +
Sbjct: 31  IVRIANKDLNGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYV 90

Query: 61  E-QDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E ++Y                     V  DL   V  +I  +  +  Y+G+RH +G  VR
Sbjct: 91  ENKEYDLPDWLLNHRREPVTGKNLNLVTTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVR 150

Query: 100 GQRTHTNAR 108
           GQRT +N R
Sbjct: 151 GQRTRSNGR 159


>gi|302662738|ref|XP_003023020.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517]
 gi|291186996|gb|EFE42402.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517]
          Length = 88

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 36  KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
           +  I P   V +L   +V+ +  A+  + ++E DL+R +  NIKRL   G YRG RH   
Sbjct: 3   RFHIHPTSTVGELATRQVLDLTGAL-SNMKIENDLKREILDNIKRLKTTGTYRGRRHALN 61

Query: 96  LPVRGQRT 103
           LPVRGQ T
Sbjct: 62  LPVRGQNT 69


>gi|110668837|ref|YP_658648.1| 30S ribosomal protein S13P [Haloquadratum walsbyi DSM 16790]
 gi|121684701|sp|Q18G53|RS13_HALWD RecName: Full=30S ribosomal protein S13P
 gi|109626584|emb|CAJ53048.1| ribosomal protein S13 [Haloquadratum walsbyi DSM 16790]
          Length = 173

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  + GIG ++++ I +  ++        L E E+  I  A+
Sbjct: 21  FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                      D++   DL      ++ R+  +  Y+G+RH+RG  VR
Sbjct: 81  ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 141 GQRTKSTGRTEGTIG 155


>gi|156936975|ref|YP_001434771.1| 30S ribosomal protein S13P [Ignicoccus hospitalis KIN4/I]
 gi|156565959|gb|ABU81364.1| SSU ribosomal protein S13P [Ignicoccus hospitalis KIN4/I]
          Length = 152

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   +I  +   V  L  I GIG+ ++  I  KL I P  R+  L E+ + ++ + +
Sbjct: 11  IVRIGDTDIDGSLPAVYGLAKIKGIGYTTALAILRKLGIDPHMRLGYLSETRIRELDEKV 70

Query: 61  E---------------QDYQVEGDLRRTVA-------MNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    DL    A        +I+R   +  +RGLRH  GL V
Sbjct: 71  RDITQLGFPSWLYNRRKDYTTGKDLHLIGADLVFYARQDIEREKRIKSWRGLRHSLGLKV 130

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 131 RGQRTATTGR 140


>gi|76802056|ref|YP_327064.1| 30S ribosomal protein S13P [Natronomonas pharaonis DSM 2160]
 gi|121724406|sp|Q3IQT9|RS13_NATPD RecName: Full=30S ribosomal protein S13P
 gi|76557921|emb|CAI49505.1| ribosomal protein S13 [Natronomonas pharaonis DSM 2160]
          Length = 170

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  ++GIG + ++ I  K  +     +  L E ++  +  A+
Sbjct: 18  FVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAV 77

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E+                      +++  DL+ +   +I R+  +  YRG+RH+RG  VR
Sbjct: 78  EEYGDEVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVR 137

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 138 GQRTKSTGRTEGTIG 152


>gi|58261282|ref|XP_568051.1| 30s ribosomal protein s13 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134115685|ref|XP_773556.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256182|gb|EAL18909.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230133|gb|AAW46534.1| 30s ribosomal protein s13, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 194

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 47/156 (30%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------- 56
           + G N+P  K +  AL   +GI    S  +  +L I  E  V QL E +V  +       
Sbjct: 3   LLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSSP 62

Query: 57  -------RQAIE---------------------------------QDYQVEGDLRRTVAM 76
                   Q IE                                  D ++E + RR +  
Sbjct: 63  STTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQA 122

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           +I  L  +G YRG RH  G PV GQRT TNA++ KK
Sbjct: 123 DIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKK 158


>gi|325958562|ref|YP_004290028.1| 30S ribosomal protein S13P [Methanobacterium sp. AL-21]
 gi|325329994|gb|ADZ09056.1| ribosomal protein S13P [Methanobacterium sp. AL-21]
          Length = 149

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+  ++   K +  AL  I GIG   S+ +C         ++  L + +V+++ +A+
Sbjct: 8   MVRISRKDVDGKKTIENALADIKGIGRALSRALCQVAGFDATMQIGYLPDKDVLKLEEAV 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                DY+       +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KAPQQFELPEWMLNRRNDYETGETVHLIESDLTMRLRDDLNRMKKTRSYKGRRHEVGLPV 127

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R  K  G
Sbjct: 128 RGQRTKSTFRKGKSVG 143


>gi|145592095|ref|YP_001154097.1| 30S ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514]
 gi|158706267|sp|A4WM28|RS13_PYRAR RecName: Full=30S ribosomal protein S13P
 gi|145283863|gb|ABP51445.1| SSU ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514]
          Length = 152

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++   K+V  AL  I GIG  S+  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67

Query: 61  EQDYQVE---------------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++V                       +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHEVAPAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127

Query: 100 GQRTHTNAR 108
           GQRT T  R
Sbjct: 128 GQRTVTTGR 136


>gi|145512882|ref|XP_001442352.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409705|emb|CAK74955.1| unnamed protein product [Paramecium tetraurelia]
          Length = 150

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  E----------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           +                ++YQV   +L   +  +++R+  + C RGLRH  GL VRGQ T
Sbjct: 74  KSPRSLQHFQDEISRDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRVRGQHT 133

Query: 104 HTNARTRKKFG 114
            T  R  +  G
Sbjct: 134 KTTGRGGQTLG 144


>gi|32363352|sp|Q8TRR2|RS13_METAC RecName: Full=30S ribosomal protein S13P
          Length = 162

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++  AK V  AL  + G+G ++++ I     + P   +  L E EV ++  AI
Sbjct: 23  LVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAI 82

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                QD  + G D+  T   +I  L  +  YRGLRH RGL VR
Sbjct: 83  GKFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV+RK+
Sbjct: 143 GQRTKSTGRRGSTV---GVSRKK 162


>gi|147919301|ref|YP_686963.1| 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I]
 gi|121690302|sp|Q0W1V6|RS13_UNCMA RecName: Full=30S ribosomal protein S13P
 gi|110622359|emb|CAJ37637.1| putative 30S ribosomal protein S13P [uncultured methanogenic
           archaeon RC-I]
          Length = 224

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 28/149 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V  AL  I GIG + S+ I  +  + P   +  L   +V ++R  I
Sbjct: 72  IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           +                    +D  + G DL   V  +I  +  +  Y+G+RH RG  VR
Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191

Query: 100 GQRTHTNART-------RKKFGKGGVARK 121
           GQRT +  RT       RKK  +GG A+K
Sbjct: 192 GQRTKSTGRTGATVGVVRKKGEQGGAAKK 220


>gi|20089977|ref|NP_616052.1| 30S ribosomal protein S13P [Methanosarcina acetivorans C2A]
 gi|19914940|gb|AAM04532.1| ribosomal protein S13p [Methanosarcina acetivorans C2A]
          Length = 182

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++  AK V  AL  + G+G ++++ I     + P   +  L E EV ++  AI
Sbjct: 43  LVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAI 102

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                QD  + G D+  T   +I  L  +  YRGLRH RGL VR
Sbjct: 103 GKFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 162

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV+RK+
Sbjct: 163 GQRTKSTGRRGSTV---GVSRKK 182


>gi|329765794|ref|ZP_08257360.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137637|gb|EGG41907.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 192

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP A++ +  L  I GIG+  +  I + L I     +  L ES+V  I + I
Sbjct: 9   IVRIVGNDIPGARKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLI 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  D+  T+  +I+R      +RG RH  GL V
Sbjct: 69  TNPIAGNFPPWFLNRRKDIETGSNMHLLTSDIPFTLRNDIERERITNSWRGYRHMYGLKV 128

Query: 99  RGQRTHTNARTRKKFGKGGVAR 120
           RGQ T T  R   K G  GVA+
Sbjct: 129 RGQCTRTTGR---KGGAVGVAK 147


>gi|302501654|ref|XP_003012819.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371]
 gi|291176379|gb|EFE32179.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371]
          Length = 92

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 36  KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
           +  I P   V +L   +V+ +  A+  + ++E DL+R +  NIKRL   G YRG RH   
Sbjct: 3   RFHIHPTSTVGELATRQVLDLTGAL-SNMKIENDLKREILDNIKRLKTTGTYRGRRHALN 61

Query: 96  LPVRGQRT 103
           LPVRGQ T
Sbjct: 62  LPVRGQNT 69


>gi|84489671|ref|YP_447903.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
 gi|121722917|sp|Q2NFZ3|RS13_METST RecName: Full=30S ribosomal protein S13P
 gi|84372990|gb|ABC57260.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
          Length = 153

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI   ++     +  AL  I GIG   +  IC  L +  + ++  + +  V QI   +
Sbjct: 9   MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68

Query: 61  EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                DY+       +E DL  T+  ++ R+  +  Y+G RH  GLPV
Sbjct: 69  ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 129 RGQRTKSTFR 138


>gi|170291190|ref|YP_001738006.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175270|gb|ACB08323.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 149

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+    +   K V+ AL  + GI    +  I  K  I P R + +L + E  +I   +
Sbjct: 9   IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       +  D+   +  +I  +  +G ++G+RH  GL V
Sbjct: 69  NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT T  R  K  G
Sbjct: 129 RGQRTKTTGRVGKTVG 144


>gi|321255209|ref|XP_003193346.1| 30s ribosomal protein s13 [Cryptococcus gattii WM276]
 gi|317459816|gb|ADV21559.1| 30s ribosomal protein s13, putative [Cryptococcus gattii WM276]
          Length = 194

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 60/156 (38%), Gaps = 47/156 (30%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------- 56
           + G N+P  K +  AL   +GI    S  +  +L I  E  V QL E ++  +       
Sbjct: 3   LLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQLTALSAYLSSP 62

Query: 57  -------RQAIE---------------------------------QDYQVEGDLRRTVAM 76
                   Q +E                                  D ++E + RR +  
Sbjct: 63  STTARPSEQQLELAPPGGKVLKPVGHPAIFGGLNKGKGKGQEDPLDDLKIETEKRRAMQA 122

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           +I  L  +G YRG RH  G PV GQRT TNA+T KK
Sbjct: 123 DIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKTAKK 158


>gi|257053588|ref|YP_003131421.1| 30S ribosomal protein S13P [Halorhabdus utahensis DSM 12940]
 gi|256692351|gb|ACV12688.1| ribosomal protein S13 [Halorhabdus utahensis DSM 12940]
          Length = 176

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  ++GIG ++++ I N + I       +L + ++  I   +
Sbjct: 20  FVRIGQTDLDGTKSVERALTDMNGIGQRAARIIANDVDIDRRETFGRLEDDQIEAIVDRV 79

Query: 61  E--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E               D+       ++  DL  T   +I R+  +  Y+G+RH+RG  VR
Sbjct: 80  EGFADDVPEWLANHRNDFFDGETTHEIGTDLSLTRRQDINRMKMINAYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 140 GQRTKSTGRTEGTIG 154


>gi|294495901|ref|YP_003542394.1| 30S ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
 gi|292666900|gb|ADE36749.1| SSU ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
          Length = 148

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   ++V+ AL  I GIG ++++ I     + P   +  L +  + ++ +AI
Sbjct: 9   LVRIMNTDLQGKQKVLYALTGIKGIGRRTARLIAESAEVDPSETIGYLSDEGIARLNEAI 68

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                    ++  + G D+  T+  ++  L  +  YRG+RH RGL VR
Sbjct: 69  ETFENHLPVWMLNRQKDLLTGENKHILGQDIDLTIREDLNDLKKIRAYRGIRHERGLKVR 128

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R     G
Sbjct: 129 GQRTKSAGRGGSTIG 143


>gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
 gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
 gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1]
 gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG]
          Length = 156

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--Q 58
           + RI   N+   ++VV AL  I GIG + S  IC K  I   +R  +L   E+ ++    
Sbjct: 14  ILRILNTNVDGREKVVVALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73

Query: 59  AIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +  Q +++            +G  +  VA         +++RL  +  +RGLRH  GL V
Sbjct: 74  STPQQFKIPTWFLNRQKDVKDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|159041085|ref|YP_001540337.1| 30S ribosomal protein S13P [Caldivirga maquilingensis IC-167]
 gi|157919920|gb|ABW01347.1| ribosomal protein S13 [Caldivirga maquilingensis IC-167]
          Length = 162

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +  I   ++  +K V  AL  I GIG  ++  IC  L I P  ++ +L E  + +I  A+
Sbjct: 10  IVHIGDTDLDGSKAVAYALARIKGIGVSTAVAICRNLGINPLVKLGELNEEMIRKIDWAV 69

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              +Q                     +  DL  T   +I+R   +  +RG+RH  GL VR
Sbjct: 70  RNLHQAAPAWFVNRPKDPETGRNIHLIGADLILTARNDIERERRILSWRGIRHNLGLKVR 129

Query: 100 GQRTHTNAR 108
           GQRT T  R
Sbjct: 130 GQRTRTTGR 138


>gi|312137106|ref|YP_004004443.1| ssu ribosomal protein s13p [Methanothermus fervidus DSM 2088]
 gi|311224825|gb|ADP77681.1| SSU ribosomal protein S13P [Methanothermus fervidus DSM 2088]
          Length = 148

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 23/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  ++   K V  A+  I GIG    + I         +++  L + E+ ++  AI
Sbjct: 8   IVRLARRDLDGNKNVEEAITGIKGIGKALGKAIARVTGFEG-KKIGYLSDEELEKLEDAI 66

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+       +E DL  T+  +I RL  +  YRG+RH  GLPV
Sbjct: 67  ENPGNYGIPSWMFNRKKDYRTGENKHLIEADLEMTIREDINRLKRIRSYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R  +  G
Sbjct: 127 RGQRTKSTFRKGQTVG 142


>gi|295672670|ref|XP_002796881.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01]
 gi|226282253|gb|EEH37819.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01]
          Length = 114

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 44  RVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
           ++  L   +++ +  A+ +  ++E DLRR +  +I+RL D+G  RG RH  GLPVRGQRT
Sbjct: 11  KIGDLGNKQILSLTAALSE-MKIENDLRRQILNDIQRLKDIGTIRGRRHALGLPVRGQRT 69

Query: 104 HT 105
            +
Sbjct: 70  RS 71


>gi|300711114|ref|YP_003736928.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
 gi|299124797|gb|ADJ15136.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
          Length = 168

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 20/134 (14%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ I     I       +L + E+  I + +
Sbjct: 20  FVRIGQTDLDGTKTVERSLSEMNGIGRRAARIIAQNAGISRTATFGRLEDDEIDAIVEEV 79

Query: 61  E-------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E             Q Y       +   DL  T   +I RL  +  YRG+RH+RG  VRG
Sbjct: 80  EGFAENNPEWLANHQGYYDGEITHETGNDLELTRRQDINRLQMISAYRGVRHQRGQKVRG 139

Query: 101 QRTHTNARTRKKFG 114
           QRT +  R+    G
Sbjct: 140 QRTRSTGRSEGTIG 153


>gi|15678064|ref|NP_275178.1| 30S ribosomal protein S13P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122789|sp|O26141|RS13_METTH RecName: Full=30S ribosomal protein S13P
 gi|2621070|gb|AAB84542.1| ribosomal protein S18 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 149

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIA  +I   K +  AL  I G+G   S+ I         +R+  L + E+ ++ +AI
Sbjct: 8   MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67

Query: 61  EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                DY+       +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +   T +K    GV RK+
Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148


>gi|55376996|ref|YP_134846.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049]
 gi|266965|sp|Q00861|RS13_HALMA RecName: Full=30S ribosomal protein S13P; AltName: Full=HmaS13
 gi|148770|gb|AAA73209.1| ribosomal protein HmaS13 [Haloarcula marismortui]
 gi|55229721|gb|AAV45140.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049]
          Length = 177

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 23/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-IRQA 59
             RI   ++   K V RAL  ++GIG ++++ I  K  +   R V   ++ +VI+ + + 
Sbjct: 23  FVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVD-RRAVFGKLDDDVIERVVER 81

Query: 60  IE--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +E              +DY       +   DL+ T   +I R+  +  YRG+RH+RG  V
Sbjct: 82  VENFADDVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKV 141

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  RT    G
Sbjct: 142 RGQRTKSTGRTEGTIG 157


>gi|114329815|ref|YP_740719.1| ribosomal protein S13 [Tetrahymena malaccensis]
 gi|114150048|gb|ABI51628.1| ribosomal protein S13 [Tetrahymena malaccensis]
          Length = 276

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 27/40 (67%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           L+  +  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 73  LKNRIDTNIFFLEFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|167042556|gb|ABZ07280.1| putative ribosomal protein S13/S18 [uncultured marine microorganism
           HF4000_ANIW133F6]
          Length = 155

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+A  +I   + + + L  I G+G +++  +C+   I   +    L + E  +IR  I++
Sbjct: 18  RLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTIDE 77

Query: 63  --------------DYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                         D Q   D       ++ T+  +I RL  +  YRG+RHR G  VRGQ
Sbjct: 78  YALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVRGQ 137

Query: 102 RTHTNARTRKKFG 114
           R  +N R+    G
Sbjct: 138 RLRSNGRSGATLG 150


>gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool]
          Length = 156

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--Q 58
           + RI   N+   ++VV AL  I GIG + S  IC K  I   +R  +L   E+ ++    
Sbjct: 14  ILRILNTNVDGREKVVIALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73

Query: 59  AIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +  Q +++            +G  +  VA         +++RL  +  +RGLRH  GL V
Sbjct: 74  STPQQFKIPTWFLNRQKDVRDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|91772118|ref|YP_564810.1| 30S ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
 gi|121684548|sp|Q12ZR6|RS13_METBU RecName: Full=30S ribosomal protein S13P
 gi|91711133|gb|ABE51060.1| SSU ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
          Length = 148

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG ++S+ I +   I P   +  L + ++ ++   I
Sbjct: 9   LVRIMNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTI 68

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  + +  D+  T+  ++  L     YRGLRH RGL VR
Sbjct: 69  DKFEEQLPKWMLNRQFDPLTGENKHLLGQDIILTLKEDLNDLKKSRAYRGLRHERGLKVR 128

Query: 100 GQRTHTNAR 108
           GQRT +  R
Sbjct: 129 GQRTKSTGR 137


>gi|114329906|ref|YP_740808.1| ribosomal protein S13 [Tetrahymena pigmentosa]
 gi|114150139|gb|ABI51717.1| ribosomal protein S13 [Tetrahymena pigmentosa]
          Length = 276

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +SE  + +  I + +     ++  V  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 53  DSEWKKFKSIILKFFPKSRSIKNRVDCNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|291334094|gb|ADD93766.1| putative ribosomal protein S13/S18 [uncultured marine bacterium
           MedDCM-OCT-S05-C222]
          Length = 155

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 24/141 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+A  ++   K +  AL  + G+G +++  IC      P      L   +   +R+AIE 
Sbjct: 18  RMADTDMDGLKTLATALTAVKGVGPRTAIQICKNTGFDPASLAGHLSAEQQETLREAIEG 77

Query: 62  -------------QDYQVEGDLRRT---VAM----NIKRLMDLGCYRGLRHRRGLPVRGQ 101
                        +D +   +L  T   V++    +I RL  + CYRG+RH  G  VRGQ
Sbjct: 78  YAETVPLWMLNRQRDLETGDELHLTGQQVSLTFEDDINRLRTMKCYRGVRHASGNKVRGQ 137

Query: 102 RTHTNARTRKKFGKGGVARKR 122
           R  +N R        GV+RK+
Sbjct: 138 RGRSNGRGGLTL---GVSRKK 155


>gi|21228257|ref|NP_634179.1| 30S ribosomal protein S13P [Methanosarcina mazei Go1]
 gi|32363348|sp|Q8PV19|RS13_METMA RecName: Full=30S ribosomal protein S13P
 gi|20906714|gb|AAM31851.1| SSU ribosomal protein S13P [Methanosarcina mazei Go1]
          Length = 162

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++  AK V  AL  + GIG +++  I     + P   +  L + EV ++  AI
Sbjct: 23  LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAI 82

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                QD  + G D+  T   +I  L  +  YRGLRH RGL VR
Sbjct: 83  GKFEEIVPSWMLNRQKDLTTGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV+RK+
Sbjct: 143 GQRTKSTGRRGSTV---GVSRKK 162


>gi|73667630|ref|YP_303645.1| 30S ribosomal protein S13P [Methanosarcina barkeri str. Fusaro]
 gi|91207705|sp|Q46GC7|RS13_METBF RecName: Full=30S ribosomal protein S13P
 gi|72394792|gb|AAZ69065.1| SSU ribosomal protein S13P [Methanosarcina barkeri str. Fusaro]
          Length = 162

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++  AK V  AL  + GIG +++  I     + P   +  L + EV ++ +AI
Sbjct: 23  LVRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAI 82

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                QD  + G D+  T   +I  L  +  YRGLRH RGL VR
Sbjct: 83  GNFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVR 142

Query: 100 GQRTHTNAR 108
           GQRT +  R
Sbjct: 143 GQRTKSTGR 151


>gi|304314284|ref|YP_003849431.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587743|gb|ADL58118.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
           Marburg]
          Length = 149

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIA  +I   K +  AL  I G+G   S+ I         +R+  L + E+ ++ +AI
Sbjct: 8   MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67

Query: 61  EQ---------------DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                DY+       +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KNPAKYNIPSWMINRRNDYETGEDKHLIESDLDMCLREDLNRMRKTRSYKGRRHELGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +   T +K    GV RK+
Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148


>gi|145539402|ref|XP_001455391.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423199|emb|CAK87994.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLSKRAGELTDDEAHKITEVI 73

Query: 61  E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 134 RGQHTKTTGRGGQTLG 149


>gi|11465886|ref|NP_066435.1| ribosomal protein S13 [Ochromonas danica]
 gi|10505219|gb|AAG18401.1|AF287134_26 ribosomal protein S13 [Ochromonas danica]
          Length = 125

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           L+     NI  L++   YRG RH++ LPVRGQRTHTNA+T KK
Sbjct: 55  LKEFDKKNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKK 97


>gi|167042197|gb|ABZ06929.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
           HF4000_ANIW93I24]
          Length = 180

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 22/116 (18%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-------------- 60
           +V  L  I G+G+  +  I N L I P +R+  L   +V  I   I              
Sbjct: 1   MVVGLTKIRGVGYMFANTIINVLKINPNQRIGYLSPEQVKSIESIIKNPSASNFPSWFLN 60

Query: 61  --------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                   E  + +  D+  TV  +I+R    G +RG+RH  GL VRGQRT    R
Sbjct: 61  RRKDIETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVRGQRTRCTGR 116


>gi|16082067|ref|NP_394493.1| 30S ribosomal protein S13P [Thermoplasma acidophilum DSM 1728]
 gi|32363410|sp|Q9HJD6|RS13_THEAC RecName: Full=30S ribosomal protein S13P
 gi|10640348|emb|CAC12162.1| probable ribosomal protein S13 [Thermoplasma acidophilum]
          Length = 171

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG +    I  +L +P ++++ +L E ++ ++R+ +
Sbjct: 31  IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90

Query: 61  E-QDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E ++Y                     V  DL   V  +I  +  +  Y+G+RH +G  VR
Sbjct: 91  EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150

Query: 100 GQRTHTNAR 108
           GQRT +N R
Sbjct: 151 GQRTRSNGR 159


>gi|209880283|ref|XP_002141581.1| 40S ribosomal protein S18 [Cryptosporidium muris RN66]
 gi|209557187|gb|EEA07232.1| 40S ribosomal protein S18, putative [Cryptosporidium muris RN66]
          Length = 153

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           RI   N+   ++V+ AL  I GIG + S  +C K  +   +R  QL + EV +I      
Sbjct: 15  RIMNTNVDGRQKVMYALTAIKGIGRRFSNIVCKKADVDLRKRAGQLTQDEVNRIVAIVTN 74

Query: 57  ------------RQAIEQD----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                       RQ   +D    +    +L  ++  +++RL  +  +RGLRH  G+ VRG
Sbjct: 75  PLQFNIPSYMLNRQRDLKDGKYKHMTSNNLEASLREDLERLKKIRSHRGLRHHWGIRVRG 134

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 135 QHTKTTGR 142


>gi|11466256|ref|NP_049571.1| ribosomal protein S13 [Tetrahymena pyriformis]
 gi|5306132|gb|AAD41916.1|AF160864_4 ribosomal protein S13 [Tetrahymena pyriformis]
          Length = 276

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 28/41 (68%)

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +L+  V  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 72  NLKNRVDCNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|145479337|ref|XP_001425691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145534229|ref|XP_001452859.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392763|emb|CAK58293.1| unnamed protein product [Paramecium tetraurelia]
 gi|124420558|emb|CAK85462.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 134 RGQHTKTTGRGGQTLG 149


>gi|145483041|ref|XP_001427543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394625|emb|CAK60145.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  E---------------------QDYQVE-GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 134 RGQHTKTTGRGGQTLG 149


>gi|15027633|ref|NP_149367.1| ribosomal protein S13 [Tetrahymena thermophila]
 gi|15011469|gb|AAK77564.1|AF396436_4 ribosomal protein S13 [Tetrahymena thermophila]
          Length = 276

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++E  + +  +   +     L+  +  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 53  DTEWKKFKSILSTFFPKSRSLKNRMDTNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|330506853|ref|YP_004383281.1| 30S ribosomal protein S13p/S18e [Methanosaeta concilii GP-6]
 gi|328927661|gb|AEB67463.1| ribosomal protein S13p/S18e [Methanosaeta concilii GP-6]
          Length = 181

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   ++V  AL  I G+G + ++    +  + P   +  L ++E+ ++++ +
Sbjct: 29  IVRILNTDLAGKRQVHMALTGIKGVGRRCAKIFTERAGVDPNATLGLLPDAEIDKLKKVV 88

Query: 61  EQD---------------------YQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E+D                       + G DL  T+  ++  +  +  Y+GLRH RGL V
Sbjct: 89  EEDAINILPVWMVNRRGDIETGKDIHIMGMDLNMTLREDLDLMKKMRSYKGLRHERGLRV 148

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T +  RT       GV+RKR
Sbjct: 149 RGQKTRSTGRTGAIV---GVSRKR 169


>gi|161527833|ref|YP_001581659.1| 30S ribosomal protein S13P [Nitrosopumilus maritimus SCM1]
 gi|160339134|gb|ABX12221.1| ribosomal protein S13 [Nitrosopumilus maritimus SCM1]
          Length = 194

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP  ++++  L  I GIG+  +  I + L I     +  L +  V  I + I
Sbjct: 12  IVRIVGNDIPGERKMLVGLTQIKGIGYNFATAILDTLNIDSNSNIGHLTDENVQAIEKLI 71

Query: 61  E---------------QDYQVEGDLRR-------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +D +   DL         T+  +I+R      +RG RH  GL V
Sbjct: 72  TNPAEGNFPTWFLNRRKDIETGNDLHLLTSDIPFTLRNDIERERVTASWRGYRHLSGLKV 131

Query: 99  RGQRTHTNAR 108
           RGQRT T+ R
Sbjct: 132 RGQRTRTSGR 141


>gi|195653817|gb|ACG46376.1| 30S ribosomal protein S13 [Zea mays]
          Length = 124

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKITKDLSEEEVITLRKEVGK 105

Query: 63  DYQVEGDLRR 72
            Y +EGDL+R
Sbjct: 106 -YMIEGDLKR 114


>gi|302690598|ref|XP_003034978.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8]
 gi|300108674|gb|EFJ00076.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8]
          Length = 171

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 33/53 (62%)

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + ++E +LRR +  NI     +G Y GLRH   LPVRGQ T +NA+T KK  +
Sbjct: 115 NLRIESELRREIRENIAHQRMIGSYVGLRHAMHLPVRGQNTQSNAKTAKKLNQ 167


>gi|296085211|emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 774 RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVAN 833

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 834 PRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 893

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 894 QHTKTTGRRGKTV---GVSKKR 912


>gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
 gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
          Length = 156

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V+ AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIM 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  STPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|33521690|gb|AAQ21388.1| ribosomal protein S18 [Ixodes ricinus]
          Length = 152

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71

Query: 57  ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|156847769|ref|XP_001646768.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117448|gb|EDO18910.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 146

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL YI G+G + +  +C K  +   +R  +L + E+ ++ Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 73

Query: 61  E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DY  +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNFKIPAWFLNRQKDVNDGKDYHSLANNIESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|301117146|ref|XP_002906301.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
 gi|262107650|gb|EEY65702.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
          Length = 152

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  AL  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 12  ILRILNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDVTKRAGELTNDEIERVVAII 71

Query: 61  EQDYQVE--------------GDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           +   Q +              G   + VA N++        RL  +  +RGLRH  GL V
Sbjct: 72  QNPLQFKIPVWFLNRQKDFKTGKHSQVVANNLQGKWREDYERLKKIYAHRGLRHWWGLKV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|67083901|gb|AAY66885.1| ribosomal protein S18 [Ixodes scapularis]
          Length = 153

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71

Query: 57  ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|15922391|ref|NP_378060.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7]
 gi|32363379|sp|Q96YV7|RS13_SULTO RecName: Full=30S ribosomal protein S13P
 gi|15623180|dbj|BAB67169.1| 172aa long hypothetical 30S ribosomal protein S13 [Sulfolobus
           tokodaii str. 7]
          Length = 172

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 22/123 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    +V  AL  + GIG+ +++ I  KL +  +RR+ +L + ++ +I   +
Sbjct: 10  IVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYL 69

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  TDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKV 129

Query: 99  RGQ 101
           RGQ
Sbjct: 130 RGQ 132


>gi|255717919|ref|XP_002555240.1| KLTH0G04664p [Lachancea thermotolerans]
 gi|238936624|emb|CAR24803.1| KLTH0G04664p [Lachancea thermotolerans]
          Length = 146

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+    ++V AL  I G+G + +  +C K  +  ++R  +L + E   ++QI 
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLVCKKADVSLQKRAGELTQEELERIVQIM 73

Query: 58  QAIEQ------------------DYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q                  DY  +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQKDVNDGKDYHNLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRKR 145


>gi|323455964|gb|EGB11831.1| hypothetical protein AURANDRAFT_20379 [Aureococcus anophagefferens]
          Length = 154

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   NI   ++V+ AL  I G+G + S  +C K A+   +R  +L   EV ++   I  
Sbjct: 17  RVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAIIQN 76

Query: 61  -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+           L++ +  +++RL  +  +RGLRH  G+ VRG
Sbjct: 77  PKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRVRG 136

Query: 101 QRTHTNAR 108
           Q T +  R
Sbjct: 137 QHTKSTGR 144


>gi|50288491|ref|XP_446675.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525983|emb|CAG59602.1| unnamed protein product [Candida glabrata]
          Length = 147

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 30/136 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+    ++V AL  I G+G + +  +C K  +   +R  +L + E   V+QI 
Sbjct: 15  ILRLLNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 74

Query: 58  QAIEQ------------------DY-----QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
           Q   Q                  DY     QVE  LR     +++RL  +  +RG+RH  
Sbjct: 75  QNPTQYKIPAWFLNRQRDIADGKDYHTLANQVESKLRD----DLERLKKIRAHRGIRHFW 130

Query: 95  GLPVRGQRTHTNARTR 110
           GL VRGQ T T  R R
Sbjct: 131 GLRVRGQHTKTTGRRR 146


>gi|268324996|emb|CBH38584.1| 30S ribosomal protein S13P [uncultured archaeon]
          Length = 167

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   + V  +LC ++GIG + ++ +     I  + ++  L + EV +++ AI
Sbjct: 15  FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74

Query: 61  EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                 D  + G DL      +I  L  +  YRG+RH RGL VR
Sbjct: 75  NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134

Query: 100 GQRTHTNAR 108
           GQRT    R
Sbjct: 135 GQRTKATGR 143


>gi|49258832|pdb|1S1H|M Chain M, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
           Yeast Obtained By Docking Atomic Models For Rna And
           Protein Components Into A 11.7 A Cryo-Em Map. This File,
           1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
           In File 1s1i
          Length = 132

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++ 
Sbjct: 2   RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 61

Query: 62  -------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRG 100
                        Q+   +G    T+A N++        RL  +  +RG+RH  GL VRG
Sbjct: 62  PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 121

Query: 101 QRTHTNARTR 110
           Q T T  R R
Sbjct: 122 QHTKTTGRRR 131


>gi|298674774|ref|YP_003726524.1| 30S ribosomal protein S13P [Methanohalobium evestigatum Z-7303]
 gi|298287762|gb|ADI73728.1| ribosomal protein S13P [Methanohalobium evestigatum Z-7303]
          Length = 149

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++P  + V  AL  I GIG +++  +     I P+ ++  L + E+  +   I
Sbjct: 9   LVRVMNTDLPGDQPVRLALTGIKGIGRRTANIVVEGSGIDPDTKIGYLSDEEIDTLNSTI 68

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  + +  D+  ++  ++  L     YRG+RH RGL VR
Sbjct: 69  NNFESHLPSWMLNRQNDPYSGENKHLLGQDIFMSLREDVNTLKKTRAYRGVRHERGLKVR 128

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV++K+
Sbjct: 129 GQRTKSTGRGGSTI---GVSKKK 148


>gi|6320658|ref|NP_010738.1| Rps18ap [Saccharomyces cerevisiae S288c]
 gi|6323615|ref|NP_013686.1| Rps18bp [Saccharomyces cerevisiae S288c]
 gi|1350951|sp|P35271|RS18_YEAST RecName: Full=40S ribosomal protein S18
 gi|313103676|pdb|3IZB|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
 gi|315113459|pdb|3O2Z|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The First 80s In The Asymmetric Unit.
 gi|315113487|pdb|3O30|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The Second 80s In The Asymmetric Unit.
 gi|575693|emb|CAA86629.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|927725|gb|AAB64891.1| Ydr450wp [Saccharomyces cerevisiae]
 gi|151942415|gb|EDN60771.1| ribosomal protein S18A [Saccharomyces cerevisiae YJM789]
 gi|151946135|gb|EDN64366.1| ribosomal protein S18B [Saccharomyces cerevisiae YJM789]
 gi|190408214|gb|EDV11479.1| ribosomal protein S18A [Saccharomyces cerevisiae RM11-1a]
 gi|259145683|emb|CAY78947.1| Rps18ap [Saccharomyces cerevisiae EC1118]
 gi|259148549|emb|CAY81794.1| Rps18bp [Saccharomyces cerevisiae EC1118]
 gi|285811461|tpg|DAA12285.1| TPA: Rps18ap [Saccharomyces cerevisiae S288c]
 gi|285813977|tpg|DAA09872.1| TPA: Rps18bp [Saccharomyces cerevisiae S288c]
          Length = 146

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           +              Q+   +G    T+A N++        RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|302680575|ref|XP_003029969.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8]
 gi|300103660|gb|EFI95066.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8]
          Length = 156

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E   ++ I 
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 58  QAIEQ------------------DYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q                  DYQ+  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKDYQILSNGIDSKLRDDLERLKKIRAHRGLRHYWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|284165825|ref|YP_003404104.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
 gi|284015480|gb|ADB61431.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
          Length = 174

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP--------PERRVHQLVES- 51
             RI   ++   K V R+L  ++G+G ++++ I ++  +          +  + ++VE+ 
Sbjct: 18  FVRIGQTDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETV 77

Query: 52  --------EVIQIRQAI----EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                   + +  RQ+     E  +++  DL+ T   +I R+  +  Y+G RH+RG  VR
Sbjct: 78  ENYAEEVPDWLNNRQSDFYTGETTHEIGNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVR 137

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 138 GQRTKSTGRTEGTIG 152


>gi|224085191|ref|XP_002307515.1| predicted protein [Populus trichocarpa]
 gi|222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + S  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFSNIVCKKADVDMNKRAGELSAAELDNLMTIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|281500818|pdb|3JYV|M Chain M, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
           EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
           Lanuginosus Ribosome At 8.9a Resolution
          Length = 130

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++ 
Sbjct: 1   RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 60

Query: 62  -------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRG 100
                        Q+   +G    T+A N++        RL  +  +RG+RH  GL VRG
Sbjct: 61  PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 120

Query: 101 QRTHTNARTR 110
           Q T T  R R
Sbjct: 121 QHTKTTGRRR 130


>gi|289580104|ref|YP_003478570.1| ribosomal protein S13P [Natrialba magadii ATCC 43099]
 gi|289529657|gb|ADD04008.1| ribosomal protein S13P [Natrialba magadii ATCC 43099]
          Length = 171

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPER---RVHQLVESEVIQI- 56
             RI   ++   K V R+L  ++GIG ++++ I  K  +       R+ + V  EV+ + 
Sbjct: 17  FVRIGQTDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLV 76

Query: 57  -------------RQ----AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                        RQ    + E  +++  DL+ +   +I R+  +  Y+G+RH+RG  VR
Sbjct: 77  ENYAEEVPDWLNNRQNDFYSGETTHEIGNDLQLSRQHDINRMKMIDSYKGVRHKRGQKVR 136

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 137 GQRTKSTGRTEGTIG 151


>gi|114329861|ref|YP_740764.1| ribosomal protein S13 [Tetrahymena paravorax]
 gi|114150094|gb|ABI51673.1| ribosomal protein S13 [Tetrahymena paravorax]
          Length = 276

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 25/34 (73%)

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           +NI  L  +  YRGLRH +GLPVRGQRT TNA +
Sbjct: 79  INIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|195998744|ref|XP_002109240.1| ribosomal protein S18 [Trichoplax adhaerens]
 gi|190587364|gb|EDV27406.1| ribosomal protein S18 [Trichoplax adhaerens]
          Length = 153

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+ G NI    +++ AL  I G G + +  +C K  +  ++R  +L E E   VI I 
Sbjct: 13  ILRVMGTNIDGRVKIMFALTAIKGCGRRFANIVCKKAGVDIDKRAGELTEDEIDKVITIM 72

Query: 58  QAIEQ----DYQV-------EGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+ +       +G   + ++ N++        RL  +  +RG+RH  GL V
Sbjct: 73  QNPRQYKIPDWFLNRQKDIKDGKFSQVLSNNLETKLREDLERLKKVRAHRGIRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 133 RGQHTKTTGRKGRTV---GVAKKK 153


>gi|146422129|ref|XP_001487006.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
 gi|146388127|gb|EDK36285.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
          Length = 145

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + S  +C K  +  ++R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIM 73

Query: 61  E--------------QDYQVEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98
           +              Q  QV+G     +A N        ++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNMESKLRDDLERLKKIRAHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|149286992|gb|ABR23395.1| ribosomal protein S18 [Ornithodoros parkeri]
          Length = 153

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELSEEEVEKLITIM 71

Query: 57  ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88]
 gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger]
          Length = 155

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E   ++ I 
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 58  QAIEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q+  Q                  D QV    L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QSPTQYKIPTWFLNRQRDITDGKDSQVVSNSLDSKIREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|22653468|gb|AAN04078.1| ribosomal protein S13 [Amoebidium parasiticum]
          Length = 130

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 22  IHGIGFKSSQDICNKLAIPPE--RRVHQLVESEV-------IQIRQAIEQDYQ---VEGD 69
           ++GIG K    I  +L +     R V     S++       ++    I  D+    +E +
Sbjct: 26  VYGIGEKEYATISVQLGLSSNQGRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIEQN 85

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           LR  +   I  L ++  Y+G+RH++GLPV GQRT TNA
Sbjct: 86  LRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNA 123


>gi|305662631|ref|YP_003858919.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230]
 gi|304377200|gb|ADM27039.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230]
          Length = 156

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  +I     +   L  + GIG+  +  IC  L + P   +  + + E+ +I + +
Sbjct: 8   IVRVAETDIAGELSLSWGLSRVKGIGYNMAIAICRILGLDPSMPIGFITDQEIEKIEELL 67

Query: 61  E---------------QDYQVEGDLRRTVA-------MNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   D+    +        +I R + +  +RG+RH  G  V
Sbjct: 68  KNPQKYGIPVWFLNRRKDYETGNDMHLVSSELIYYARQDIDREIRIRSWRGIRHAMGYKV 127

Query: 99  RGQRTHTNAR 108
           RGQRTHT  R
Sbjct: 128 RGQRTHTTGR 137


>gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4]
 gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550)
           [Aspergillus nidulans FGSC A4]
          Length = 155

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  + G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTIL 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DYQV  + L      +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA]
 gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii]
 gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei]
          Length = 156

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V  AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|13877525|gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana]
 gi|17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana]
          Length = 152

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKTDVDMNKRAGELSAAEIDNLMTIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|256270865|gb|EEU06003.1| Rps18bp [Saccharomyces cerevisiae JAY291]
          Length = 146

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           +              Q+    G    T+A N++        RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQNDITNGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|318086970|gb|ADV40077.1| ribosomal protein S18 [Latrodectus hesperus]
          Length = 153

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++    
Sbjct: 12  ILRVMNTNIDGRRKVMFALTAIKGVGRRFSNLVCKKADVDLNKRAGELSEEEVEKLITIM 71

Query: 57  ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+              QV  + L   +  +++RL  +  ++GLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNGLENKLREDLERLKKIRAHKGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|170592174|ref|XP_001900844.1| 40S ribosomal protein S18 [Brugia malayi]
 gi|158591711|gb|EDP30315.1| 40S ribosomal protein S18, putative [Brugia malayi]
          Length = 154

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   RR  +L E ++ +++Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKYSQMLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|156372342|ref|XP_001628997.1| predicted protein [Nematostella vectensis]
 gi|156215987|gb|EDO36934.1| predicted protein [Nematostella vectensis]
          Length = 153

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   ++++ A+  I G+G + +  +C K  I   +R  +L E EV ++      
Sbjct: 14  RVLNTNIDGKQKIMFAMTSIKGVGRRYANIVCKKADIDMNKRAGELTEDEVERVVTIMQN 73

Query: 57  ------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                       RQ   +D +    +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDHKDGKYSQILANGLDNKMREDLERLKKIRAHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GVA+K+
Sbjct: 134 QHTKTTGRKGRTV---GVAKKK 152


>gi|149234674|ref|XP_001523216.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146453005|gb|EDK47261.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 145

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + S  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIM 73

Query: 61  E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           +              Q  QV+G     +A N++        RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|312082633|ref|XP_003143525.1| 40S ribosomal protein S18 [Loa loa]
 gi|307761312|gb|EFO20546.1| 40S ribosomal protein S18 [Loa loa]
          Length = 154

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   RR  +L E ++ +++Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKYSQVLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|154313500|ref|XP_001556076.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10]
 gi|150849516|gb|EDN24709.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10]
          Length = 82

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +E +L+R +  NI+R+  +G YRG RH  GLPVRGQ T +   T +K  K  +A
Sbjct: 3   LETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNKDCIA 56


>gi|15219950|ref|NP_173692.1| PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding /
           structural constituent of ribosome [Arabidopsis
           thaliana]
 gi|15234790|ref|NP_192718.1| RPS18C (S18 RIBOSOMAL PROTEIN); RNA binding / nucleic acid binding
           / structural constituent of ribosome [Arabidopsis
           thaliana]
 gi|18399100|ref|NP_564434.1| 40S ribosomal protein S18 (RPS18B) [Arabidopsis thaliana]
 gi|297809155|ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297845304|ref|XP_002890533.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297851838|ref|XP_002893800.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
           lyrata]
 gi|464707|sp|P34788|RS18_ARATH RecName: Full=40S ribosomal protein S18
 gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein S18 [Arabidopsis thaliana]
 gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal protein S18; 25853-24673 [Arabidopsis thaliana]
 gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal protein [Arabidopsis thaliana]
 gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5 [Arabidopsis thaliana]
 gi|405613|emb|CAA80684.1| ribosomal protein S18A [Arabidopsis thaliana]
 gi|434343|emb|CAA82273.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|434345|emb|CAA82274.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|434906|emb|CAA82275.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|2505871|emb|CAA72909.1| ribosomal protein S18A [Arabidopsis thaliana]
 gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A.
           thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and
           gb|R30430 come from this gene [Arabidopsis thaliana]
 gi|4538910|emb|CAB39647.1| S18.A ribosomal protein [Arabidopsis thaliana]
 gi|7267675|emb|CAB78103.1| S18.A ribosomal protein [Arabidopsis thaliana]
 gi|14334584|gb|AAK59471.1| putative ribosomal protein S18 [Arabidopsis thaliana]
 gi|17979113|gb|AAL47500.1| putative ribosomal protein S18 [Arabidopsis thaliana]
 gi|21555397|gb|AAM63849.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|21592452|gb|AAM64403.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|21593027|gb|AAM64976.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis thaliana]
 gi|56236126|gb|AAV84519.1| At1g22780 [Arabidopsis thaliana]
 gi|98961089|gb|ABF59028.1| At1g22780 [Arabidopsis thaliana]
 gi|145713244|gb|ABP96570.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713246|gb|ABP96571.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713248|gb|ABP96572.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713250|gb|ABP96573.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713252|gb|ABP96574.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713254|gb|ABP96575.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713256|gb|ABP96576.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713258|gb|ABP96577.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713260|gb|ABP96578.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713262|gb|ABP96579.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713264|gb|ABP96580.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713266|gb|ABP96581.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713268|gb|ABP96582.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713270|gb|ABP96583.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713272|gb|ABP96584.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713274|gb|ABP96585.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713276|gb|ABP96586.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713278|gb|ABP96587.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713280|gb|ABP96588.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713282|gb|ABP96589.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713284|gb|ABP96590.1| pointed first leaf [Arabidopsis thaliana]
 gi|297318298|gb|EFH48720.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336375|gb|EFH66792.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339642|gb|EFH70059.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332192166|gb|AEE30287.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
 gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
          Length = 152

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|322695969|gb|EFY87768.1| 40S ribosomal protein S18 [Metarhizium acridum CQMa 102]
 gi|322707043|gb|EFY98622.1| 40S ribosomal protein S18 [Metarhizium anisopliae ARSEF 23]
          Length = 156

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
           Iowa II]
 gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502]
 gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
           Iowa II]
 gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis]
          Length = 153

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   N+   ++++ AL  I GIG + S  +C K  +   +R  QL + E+ +I   +  
Sbjct: 15  RIMNTNVDGRQKIMYALTAIKGIGRRFSNIVCKKADVNLSKRAGQLSQEEINRIVAIVAN 74

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                         +L  ++  +++RL  +  +RGLRH  G+ VRG
Sbjct: 75  PLQFNIPSYMLNRQKDVKDGKYKHITSNNLEASLREDLERLKKIRSHRGLRHHWGVRVRG 134

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 135 QHTKTTGR 142


>gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40]
 gi|238507888|ref|XP_002385145.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
 gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae]
 gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
          Length = 155

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E   V+ I 
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERVVTIL 73

Query: 58  QAIEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q                  D QV   +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi]
 gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi]
          Length = 156

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRVLNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|257388629|ref|YP_003178402.1| 30S ribosomal protein S13P [Halomicrobium mukohataei DSM 12286]
 gi|257170936|gb|ACV48695.1| ribosomal protein S13 [Halomicrobium mukohataei DSM 12286]
          Length = 178

 Score = 47.8 bits (112), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ I  K  +  +     L + ++  + + +
Sbjct: 20  FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79

Query: 61  E--------------QDY-------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E               D+       ++  DL+     ++ R+  +  Y+G+RH+RG  VR
Sbjct: 80  EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 140 GQRTKSTGRTEGTIG 154


>gi|315425850|dbj|BAJ47503.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427708|dbj|BAJ49304.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 161

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ-- 58
           + R+   ++    R+  AL  + GIG      I     I P  R+  L E ++ +I Q  
Sbjct: 8   IVRVLNTDVDGTLRLPYALARVKGIGVNLGYAIARAAGIDPATRLGNLTEKQIEKIEQIA 67

Query: 59  -------------------AIEQDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 +D  + G DL   +  +I+ +M    ++G+RH  GL V
Sbjct: 68  RNPTRFGIPAWLLNRRFDPVTGEDRHLTGADLELAIKEDIQTMMRTKSWKGIRHSLGLKV 127

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 128 RGQRTRTTGR 137


>gi|164660596|ref|XP_001731421.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966]
 gi|159105321|gb|EDP44207.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966]
          Length = 189

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 35  NKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
           N   +PP +R     ++ +  +R  +     +E DLRR V  NI     +G Y G RH  
Sbjct: 89  NPAELPPSQRP----KASMDPLRSIV-----LESDLRREVLANIAHHRSIGSYVGKRHAG 139

Query: 95  GLPVRGQRTHTNARTRKKFGK 115
           G PVRGQRT  NA T ++  +
Sbjct: 140 GFPVRGQRTQRNALTARRLNR 160


>gi|242043060|ref|XP_002459401.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
 gi|241922778|gb|EER95922.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
          Length = 152

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +  
Sbjct: 14  RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELSSDELERLMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|45190917|ref|NP_985171.1| AER315Cp [Ashbya gossypii ATCC 10895]
 gi|44983985|gb|AAS52995.1| AER315Cp [Ashbya gossypii ATCC 10895]
          Length = 146

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + +  IC K  +   +R  +L + E+ ++ Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIM 73

Query: 61  E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DY  +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|169598492|ref|XP_001792669.1| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
 gi|160704404|gb|EAT90262.2| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
          Length = 155

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLGKRAGDLTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +T+A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ + T  R
Sbjct: 134 RGQHSKTTGR 143


>gi|226493800|ref|NP_001141254.1| hypothetical protein LOC100273341 [Zea mays]
 gi|194703562|gb|ACF85865.1| unknown [Zea mays]
 gi|195618614|gb|ACG31137.1| 40S ribosomal protein S18 [Zea mays]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +  
Sbjct: 14  RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|255628659|gb|ACU14674.1| unknown [Glycine max]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + S   C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFSNICCKKADVDMNKRAGELSAAELDSVMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQLKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|255566712|ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
 gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18, putative [Ricinus communis]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|224082650|ref|XP_002306780.1| predicted protein [Populus trichocarpa]
 gi|118481499|gb|ABK92692.1| unknown [Populus trichocarpa]
 gi|222856229|gb|EEE93776.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|294872965|ref|XP_002766467.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294881108|ref|XP_002769248.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294951469|ref|XP_002786996.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294956183|ref|XP_002788842.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239867347|gb|EEQ99184.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239872526|gb|EER01966.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239901586|gb|EER18792.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239904454|gb|EER20638.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
          Length = 149

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+    +V  AL  I GIG + +  IC K  +   +R  +L + E+ +I Q I
Sbjct: 13  IQRICNTNVDGRVKVAYALTAIKGIGRRFATLICKKCEVDTNKRAGELTQEEIQKIVQVI 72

Query: 61  EQDYQ--------------VEGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
               Q              V+G   +  +         +++R+  +  +RGLRH  G+ V
Sbjct: 73  SNPQQFRIPQWFLNRQHDPVDGTYSQKYSNLLDASKREDLERMKKMRLHRGLRHYWGIRV 132

Query: 99  RGQRTHTNAR 108
           RGQ T T+ R
Sbjct: 133 RGQHTKTSGR 142


>gi|224066487|ref|XP_002302108.1| predicted protein [Populus trichocarpa]
 gi|118481417|gb|ABK92651.1| unknown [Populus trichocarpa]
 gi|222843834|gb|EEE81381.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|219852960|ref|YP_002467392.1| 30S ribosomal protein S13P [Methanosphaerula palustris E1-9c]
 gi|219547219|gb|ACL17669.1| ribosomal protein S13 [Methanosphaerula palustris E1-9c]
          Length = 151

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R++  ++   K V  AL  I G+G  +S  I  + A+     + +L + +V +IR  +
Sbjct: 11  FVRVSNTDLDGTKSVRVALTGIPGVGRHTSGIITRRAAVNEHELLGRLPDGDVDRIRDVV 70

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  + +  DL  T   ++  L  + CYRG+RH  G  VR
Sbjct: 71  TDYGALIPAWMRNRIKDVYTGESKHILGSDLAMTNDEDVNLLRKIRCYRGIRHETGQKVR 130

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 131 GQRTKSTGRTGTTVG 145


>gi|226504536|ref|NP_001151612.1| 40S ribosomal protein S18 [Zea mays]
 gi|242032711|ref|XP_002463750.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
 gi|194708790|gb|ACF88479.1| unknown [Zea mays]
 gi|195605976|gb|ACG24818.1| 40S ribosomal protein S18 [Zea mays]
 gi|195618188|gb|ACG30924.1| 40S ribosomal protein S18 [Zea mays]
 gi|195620216|gb|ACG31938.1| 40S ribosomal protein S18 [Zea mays]
 gi|195648096|gb|ACG43516.1| 40S ribosomal protein S18 [Zea mays]
 gi|238008500|gb|ACR35285.1| unknown [Zea mays]
 gi|241917604|gb|EER90748.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
          Length = 152

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +  
Sbjct: 14  RLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELERLMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|19074361|ref|NP_585867.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
 gi|51702028|sp|Q8SRP2|RS18_ENCCU RecName: Full=40S ribosomal protein S18
 gi|19069003|emb|CAD25471.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
          Length = 153

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA- 59
           + RI   NI   KR+  AL  I GIG + +  IC +L I   +R  ++ E E+ +I  A 
Sbjct: 13  IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72

Query: 60  -------IEQDYQ------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR--------GLPV 98
                  I + Y       ++G     +   +   + +   RG +++R        GL V
Sbjct: 73  LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 133 RGQRTKSNGRRGRSM---GVSRKK 153


>gi|25553581|dbj|BAC24846.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|50509331|dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|125599284|gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group]
          Length = 148

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + S   C K  I   +R  +L   E+ ++   +
Sbjct: 8   ILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 67

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 68  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 128 RGQHTKTTGRRGKTV---GVSKKR 148


>gi|307352909|ref|YP_003893960.1| 30S ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
 gi|307156142|gb|ADN35522.1| ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
          Length = 148

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V  AL  + GIG  +S  I     + P   +  L E  V +IR+ +
Sbjct: 9   FVRVENTDLDGTKSVQVALTGLAGIGMHTSVSIAQMAGVDPRATLGLLEEDVVDRIREVV 68

Query: 61  --------------EQD-YQVEG------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                         ++D Y  E       DLR  V  ++ R+  + CYRG+RH     VR
Sbjct: 69  SGYTEKVPAWMLNRQKDVYTGEAKQLLGTDLRMAVDDDVNRMRKIRCYRGIRHETHQKVR 128

Query: 100 GQRTHTNAR 108
           GQRT +  R
Sbjct: 129 GQRTKSTGR 137


>gi|282164925|ref|YP_003357310.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
 gi|282157239|dbj|BAI62327.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
          Length = 225

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++    +V+ AL  I GIG + S+ +  K  + P   +  L   +V ++R A+
Sbjct: 71  LVRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNAL 130

Query: 61  EQ---------------DYQVEG------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                 Y  E       DL  +   +I  +  +  Y+G+RH RG  VR
Sbjct: 131 ENIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVR 190

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 191 GQRTRSTGRTGATVG 205


>gi|310798436|gb|EFQ33329.1| ribosomal protein S13/S18 [Glomerella graminicola M1.001]
          Length = 156

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|256273632|gb|EEU08559.1| Rps18ap [Saccharomyces cerevisiae JAY291]
          Length = 147

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61
           +   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++  
Sbjct: 18  LLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQNP 77

Query: 62  ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101
                       Q+   +G    T+A N++        RL  +  +RG+RH  GL VRGQ
Sbjct: 78  THYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRGQ 137

Query: 102 RTHTNARTR 110
            T T  R R
Sbjct: 138 HTKTTGRRR 146


>gi|302410605|ref|XP_003003136.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
 gi|261358160|gb|EEY20588.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
          Length = 156

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVHSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|260829983|ref|XP_002609941.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
 gi|41018059|sp|Q8ISP0|RS18_BRABE RecName: Full=40S ribosomal protein S18
 gi|24266988|gb|AAN52390.1| ribosomal protein S18 [Branchiostoma belcheri]
 gi|229295303|gb|EEN65951.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
          Length = 152

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   ++++ AL  I G+G + S  +C K  I   +R  +L + EV   I I 
Sbjct: 12  ILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIM 71

Query: 58  QAIEQ----DYQVE---------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+ +                  L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|269986619|gb|EEZ92901.1| ribosomal protein S13 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 179

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 22/124 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K+V   L  I GIGF  S  +   L IP   ++  L E ++ ++++A+
Sbjct: 26  IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85

Query: 61  EQ---------------------DYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                  DY  +  +LR    M I+++     Y+G RH     +
Sbjct: 86  SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145

Query: 99  RGQR 102
           RGQ+
Sbjct: 146 RGQK 149


>gi|156086130|ref|XP_001610474.1| 40S ribosomal protein S18 [Babesia bovis T2Bo]
 gi|154797727|gb|EDO06906.1| 40S ribosomal protein S18, putative [Babesia bovis]
          Length = 154

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           RI   N+   ++V  AL  I GIG + +  +C    I   +R  +L   E+ ++   I  
Sbjct: 16  RILNTNVDGRQKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTTDEINKVVTIISS 75

Query: 61  -------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+   +L  T  M       +++R+  +  +RGLRH  GL  RG
Sbjct: 76  PADVMIPAWFLNRQKDYKEGKNLHNTANMLDTCLRDDLERMKKMRLHRGLRHYWGLRTRG 135

Query: 101 QRTHTNARTRKKFG 114
           Q T +  R  K  G
Sbjct: 136 QHTKSTGRHGKTVG 149


>gi|322369537|ref|ZP_08044102.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
 gi|320551269|gb|EFW92918.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
          Length = 168

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ +  +  +  +    +L + ++ ++ +A+
Sbjct: 16  FVRIGQTDLDGTKTVERSLSEMNGIGRRTARIVAEEADVDRKATFGRLDDDDIERVVEAV 75

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       ++   DL  +   ++ R+  +  Y+G+RH+RG  VR
Sbjct: 76  ENYADEVPAWLTNHRKEYFSGETTHETGNDLSMSRRRDLNRMQMIDSYKGVRHKRGQKVR 135

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 136 GQRTKSTGRTEGTIG 150


>gi|302915869|ref|XP_003051745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732684|gb|EEU46032.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 131

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 1   ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 60

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G     +A         +++RL  +  +RGLRH  GL V
Sbjct: 61  QNPTQYKIPTWFLNRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 120

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 121 RGQHTKTTGR 130


>gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 155

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E   ++ I 
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTIL 73

Query: 58  QAIEQ------------------DYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q                  D QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QTPTQYKIPSWFLNRQRDITDGKDTQVVSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|10802919|gb|AAG23667.1|AF288091_12 ribosomal protein S13 [Thraustochytrium aureum]
          Length = 120

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 45  VHQLVESEVIQIRQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +    ES++  +   IE+++     +  +  +  +   K+++     R LR ++GLPVRG
Sbjct: 44  ISLFSESQLEHLSIWIEKNFTGSNCIHTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRG 103

Query: 101 QRTHTNARTRKKFGKGG 117
           QRT TNA+T K+  KG 
Sbjct: 104 QRTKTNAKTAKRLNKGS 120


>gi|50303317|ref|XP_451600.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640732|emb|CAH01993.1| KLLA0B01562p [Kluyveromyces lactis]
          Length = 146

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+     VV AL  I G+G + +  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNINVVYALTTIRGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  E---------------------QDYQ-VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DY  +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRSHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|11466207|ref|NP_066530.1| ribosomal protein S13 [Naegleria gruberi]
 gi|10444242|gb|AAG17808.1|AF288092_33 ribosomal protein S13 [Naegleria gruberi]
          Length = 163

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEV------IQIRQAIEQDY-----QVEGDLRR 72
           GIG   ++ +C    + P  R+H  +++          I + I+  +      ++  L +
Sbjct: 38  GIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLHK 97

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +   I  L  + C +G RH   LPVRGQR  TNARTRK
Sbjct: 98  EMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136


>gi|294658981|ref|XP_461313.2| DEHA2F22308p [Debaryomyces hansenii CBS767]
 gi|202953527|emb|CAG89714.2| DEHA2F22308p [Debaryomyces hansenii]
          Length = 165

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61
           +   NI    +++ AL  I G+G + S  +C K  +  ++R  +L + E+ +I   ++  
Sbjct: 37  LLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNP 96

Query: 62  ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101
                       Q  QV+G     +A N++        RL  +  +RG+RH  GL VRGQ
Sbjct: 97  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQ 156

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 157 HTKTTSRGR 165


>gi|261403748|ref|YP_003247972.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7]
 gi|261370741|gb|ACX73490.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7]
          Length = 154

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48
           + R++  +I   K+++ AL  I+G+G   ++ I     + P++    L            
Sbjct: 13  LVRVSRTDIDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTEEEIKKIEEVL 72

Query: 49  -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                  + S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP 
Sbjct: 73  IDPAKFGIPSWMFNRRKDYITGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 132

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 133 RGQRTKSTFR 142


>gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas]
          Length = 152

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++++ A+  I GIG + +  +C K  +   +R  +L E E+ +I   +
Sbjct: 12  ILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKFSQVMSNTLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152


>gi|292656901|ref|YP_003536798.1| 30S ribosomal protein S13 [Haloferax volcanii DS2]
 gi|291370341|gb|ADE02568.1| ribosomal protein S13 [Haloferax volcanii DS2]
          Length = 167

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 21/133 (15%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   ++   K V R+L  + GIG ++++ I +   +       +L E E+  +   +E 
Sbjct: 22  RIGQTDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDAVVDVVEN 81

Query: 63  ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                D+    DL      +I R+  +  Y+G+RH+RG  VRGQ
Sbjct: 82  FEDHAPEWMANRRKDFFSGDTDHITGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141

Query: 102 RTHTNARTRKKFG 114
           RT +  RT    G
Sbjct: 142 RTKSTGRTEGTIG 154


>gi|290559361|gb|EFD92694.1| ribosomal protein S13 [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 179

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 22/127 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K V   L  I GI F  S  +   L IP  +++  L E E+  +++A+
Sbjct: 27  IVRIADTDLDGSKAVKDLLRSIPGISFSYSNALMKVLNIPKGKKLQDLDEKELNTLKEAL 86

Query: 61  EQ---------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                  DY +   DLR    M I+++     YRG RH     +
Sbjct: 87  SDPFKYKIPHWLFNWRRDDETGLDYHLLSNDLRSKTTMRIQKIKTSRSYRGYRHSFNYKL 146

Query: 99  RGQRTHT 105
           RGQ+  +
Sbjct: 147 RGQKVKS 153


>gi|254582072|ref|XP_002497021.1| ZYRO0D13574p [Zygosaccharomyces rouxii]
 gi|238939913|emb|CAR28088.1| ZYRO0D13574p [Zygosaccharomyces rouxii]
          Length = 146

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 30/136 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +VV AL  I G+G + +  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLSKRAGELTQEELERIVQIM 73

Query: 61  EQDYQ--------------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
           +   Q                          VE  LR     +++RL  +  +RG+RH  
Sbjct: 74  QNPTQYKIPTWFLSRQKDVNDGKDHHMLANGVESKLRD----DLERLKKIRAHRGIRHFW 129

Query: 95  GLPVRGQRTHTNARTR 110
           GL VRGQ T T  R R
Sbjct: 130 GLRVRGQHTKTTGRKR 145


>gi|198425572|ref|XP_002131089.1| PREDICTED: similar to putative ribosomal protein S18 [Ciona
           intestinalis]
          Length = 152

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   + +  AL  I GIG + S  +C K  +   +R  +L + E+ +I   +
Sbjct: 12  ILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +I+RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|170092941|ref|XP_001877692.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647551|gb|EDR11795.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 156

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTII 74

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + ++         +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKNSQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|112799401|gb|ABI23025.1| SSU ribosomal protein S13AB [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
 gi|255513949|gb|EET90214.1| ribosomal protein S13 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 177

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 26/140 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----NKLAIPPERRVHQLVESEVIQI 56
           + RIA  +I     + RAL  + GIG   S  +     +K  I P   +  L ES+V Q+
Sbjct: 19  IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78

Query: 57  RQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
            + I+  ++                      +  DL   V  +I R + L  +RG RH+ 
Sbjct: 79  EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138

Query: 95  GLPVRGQRTHTNARTRKKFG 114
           G  VRGQ T +  RT    G
Sbjct: 139 GQKVRGQHTRSTGRTGATVG 158


>gi|313229085|emb|CBY18237.1| unnamed protein product [Oikopleura dioica]
          Length = 152

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV-------IQ 55
           R+   NI   + +  A+  I GIG + +  IC K  I   +R  QL E E+       + 
Sbjct: 14  RVQNTNIDGQRNITFAMTAIKGIGRRFANIICKKADINISQRAGQLDEEEIKRMETIMLN 73

Query: 56  IRQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    DY +       +G   + ++         +++R+  + C+RGLRH   L VRG
Sbjct: 74  PRQYKVPDYFLNRQKDAKDGTFTQVISNGLETKLREDLERMKKIRCHRGLRHYWMLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
 gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
          Length = 157

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 16  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 75

Query: 61  EQDYQ--------------VEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G   + +A N        ++RL  +  +RGLRH  GL V
Sbjct: 76  QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 135

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 136 RGQHTKTTGR 145


>gi|255559398|ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
 gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18, putative [Ricinus communis]
          Length = 152

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|154316255|ref|XP_001557449.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10]
 gi|156037576|ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980]
 gi|150846499|gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10]
 gi|154697910|gb|EDN97648.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 156

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVEGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQVLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ + T  R
Sbjct: 134 RGQHSKTTGR 143


>gi|247421835|gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]
          Length = 152

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS]
 gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
          Length = 155

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITTEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G   + +A N        ++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|115455881|ref|NP_001051541.1| Os03g0794700 [Oryza sativa Japonica Group]
 gi|297606796|ref|NP_001059007.2| Os07g0173700 [Oryza sativa Japonica Group]
 gi|25553579|dbj|BAC24844.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|28269440|gb|AAO37983.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
 gi|50400039|gb|AAT76427.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
 gi|50509329|dbj|BAD30787.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|108711530|gb|ABF99325.1| 40S ribosomal protein S18, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113550012|dbj|BAF13455.1| Os03g0794700 [Oryza sativa Japonica Group]
 gi|125557400|gb|EAZ02936.1| hypothetical protein OsI_25076 [Oryza sativa Indica Group]
 gi|215765128|dbj|BAG86825.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765330|dbj|BAG87027.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636521|gb|EEE66653.1| hypothetical protein OsJ_23275 [Oryza sativa Japonica Group]
 gi|255677547|dbj|BAF20921.2| Os07g0173700 [Oryza sativa Japonica Group]
          Length = 152

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I G+G + S   C K  I   +R  +L   E+ ++   +  
Sbjct: 14  RLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|241957179|ref|XP_002421309.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36]
 gi|223644653|emb|CAX40643.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36]
 gi|238883265|gb|EEQ46903.1| 40S ribosomal protein S18 [Candida albicans WO-1]
          Length = 145

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIM 73

Query: 61  E--------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPV 98
           +              Q  QV+G     +A N++        RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
 gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
          Length = 155

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|299753190|ref|XP_001833116.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130]
 gi|298410185|gb|EAU88805.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130]
          Length = 185

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%)

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++E +LRR +  NI+    +G Y G RH   LPVRGQ T +NA T KK  +
Sbjct: 131 KIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLNR 181


>gi|222480228|ref|YP_002566465.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453130|gb|ACM57395.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239]
          Length = 174

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
             RI G ++   K V R+L  + GIG ++++ +  K  +        L E +   V+ I 
Sbjct: 20  FVRIGGADLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDAVVDIA 79

Query: 58  QAIE----------QDYQVEGDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPVR 99
           + +E          Q+    G+    V  +        I R+  +  Y+G+RH+RG  VR
Sbjct: 80  ENLEDHVPSWMTNRQNDFYSGETTHLVGTDVSEKRRHDINRMKIIESYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R+    G
Sbjct: 140 GQRTKSTGRSEGTIG 154


>gi|121700288|ref|XP_001268409.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1]
 gi|119396551|gb|EAW06983.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1]
          Length = 155

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|255629171|gb|ACU14930.1| unknown [Glycine max]
          Length = 152

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I GIG + +   C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|224032085|gb|ACN35118.1| unknown [Zea mays]
          Length = 129

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNF-DNKITKDLSEEEVITLRKEVGK 105

Query: 63  DYQVEGDL 70
            Y +EGDL
Sbjct: 106 -YMIEGDL 112


>gi|118576779|ref|YP_876522.1| ribosomal protein S13 [Cenarchaeum symbiosum A]
 gi|158706221|sp|A0RY01|RS13_CENSY RecName: Full=30S ribosomal protein S13P
 gi|118195300|gb|ABK78218.1| ribosomal protein S13 [Cenarchaeum symbiosum A]
          Length = 227

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++P  K+ V  L  I GIG+  +  I + L I     +  L + +V  I + +
Sbjct: 54  IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 E  +    D+  TV  +++R    G ++G RH  GL V
Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173

Query: 99  RGQRTHTNAR 108
           RGQRT    R
Sbjct: 174 RGQRTRNTGR 183


>gi|126179743|ref|YP_001047708.1| 30S ribosomal protein S13P [Methanoculleus marisnigri JR1]
 gi|158706247|sp|A3CWH6|RS13_METMJ RecName: Full=30S ribosomal protein S13P
 gi|125862537|gb|ABN57726.1| SSU ribosomal protein S13P [Methanoculleus marisnigri JR1]
          Length = 149

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V  AL  I GIG  +S+ I    A+ P   + +L +  V +I  A+
Sbjct: 9   FVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAV 68

Query: 61  EQ------DYQVE-------GDLRRTVAMNIKRLMD--------LGCYRGLRHRRGLPVR 99
           +       D+ V        G++R  +  ++  + D        +  YRG+RH  G  VR
Sbjct: 69  DTYTEQVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVR 128

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 129 GQRTKSTGRTGTTVG 143


>gi|254569222|ref|XP_002491721.1| Protein component of the small (40S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|238031518|emb|CAY69441.1| Protein component of the small (40S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|328351775|emb|CCA38174.1| 40S ribosomal protein S18 [Pichia pastoris CBS 7435]
          Length = 153

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + S  +C K  +   +R  +L + E+ ++   +
Sbjct: 17  ILRLLNTNVDGRIKIMYALTTIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIM 76

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G    T+A         +I+RL  +  +RG+RH  GL V
Sbjct: 77  QNPTQYKIPAWFLNRQRDTVDGKDYHTLANSLESKYRDDIERLKKIRAHRGIRHAWGLKV 136

Query: 99  RGQRTHTNAR 108
           RGQ T T +R
Sbjct: 137 RGQHTKTTSR 146


>gi|46125031|ref|XP_387069.1| hypothetical protein FG06893.1 [Gibberella zeae PH-1]
          Length = 179

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 37  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIL 96

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G     +A         +++RL  +  +RGLRH  GL V
Sbjct: 97  QNPTQYKIPTWFINRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 156

Query: 99  RGQRTHTNARTRKKFG----KGG 117
           RGQ T T  R  +  G    KGG
Sbjct: 157 RGQHTKTTGRRGRTVGVSKKKGG 179


>gi|39941500|ref|XP_360287.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
 gi|59802871|gb|AAX07649.1| 40S ribosomal protein S18-like protein [Magnaporthe grisea]
 gi|145022352|gb|EDK06372.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
          Length = 156

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++V AL  I G+G + S  +  K  +   +R  +L   E+ ++   +
Sbjct: 14  ILRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTIL 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +T+A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|225432662|ref|XP_002282412.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225437044|ref|XP_002278727.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225460586|ref|XP_002262702.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 152

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|294463827|gb|ADE77437.1| unknown [Picea sitchensis]
          Length = 152

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGIGRRFANLVCKKADVDMNKRAGELSAAELENLMTIVSN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PKQFKIPEWFLNRQKDYKDGRTNQLVSNALDMRLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
 gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
 gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR]
 gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88]
          Length = 155

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITSEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|126136941|ref|XP_001384994.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054]
 gi|126092216|gb|ABN66965.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054]
          Length = 145

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVDLTKRAGELTQEELERIVTIM 73

Query: 61  E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DY V   +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKVPAWFLNRQKDHVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|313103638|pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|22204120|gb|AAM92708.1| putative ribosomal protein S18 [Triticum aestivum]
          Length = 152

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 27/143 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I G+G + S  +C K  I   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVVHN 73

Query: 61  -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99
                        ++DY+ +G   + V+         +++RL  +  +RGLRH  G+ VR
Sbjct: 74  PRQFKVPDWFLNRKKDYK-DGRFSQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRVR 132

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQ T T  R  K     GV++KR
Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152


>gi|300708772|ref|XP_002996559.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
 gi|239605870|gb|EEQ82888.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
          Length = 161

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   N+   KRVV ALC I GIG + +  IC +  +   RR   L + E+ +I+ AI  
Sbjct: 23  RIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAIND 82

Query: 63  -----------DYQ---VEGDLRRTVA--MNIKRLMDLGCYRGLRHRR------GLPVRG 100
                      +Y+   V+G     V+  M+ +  M L   + +RH R      GL V G
Sbjct: 83  PSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKVHG 142

Query: 101 QRTHTNAR 108
           QR+ +N R
Sbjct: 143 QRSKSNGR 150


>gi|150402489|ref|YP_001329783.1| 30S ribosomal protein S13P [Methanococcus maripaludis C7]
 gi|159905737|ref|YP_001549399.1| 30S ribosomal protein S13P [Methanococcus maripaludis C6]
 gi|150033519|gb|ABR65632.1| ribosomal protein S13 [Methanococcus maripaludis C7]
 gi|159887230|gb|ABX02167.1| ribosomal protein S13 [Methanococcus maripaludis C6]
          Length = 149

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CYRG+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYRGVRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKG---GVARKR 122
           Q      RTR  F KG   GV RK+
Sbjct: 131 Q------RTRGSFRKGTSMGVKRKK 149


>gi|154151764|ref|YP_001405382.1| 30S ribosomal protein S13P [Candidatus Methanoregula boonei 6A8]
 gi|154000316|gb|ABS56739.1| ribosomal protein S13 [Methanoregula boonei 6A8]
          Length = 153

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 21/133 (15%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   ++   K V  AL  I GIG  +S  I     +    ++  L E  V +IR A+E+
Sbjct: 12  RIGTTDLDGTKSVRVALTGIKGIGRHTSTVISRMAKVDEYAKLGLLDEESVNRIRAAVEK 71

Query: 63  ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                 + + GD+      +I  +  + CY+G+RH  G  VRGQ
Sbjct: 72  YATSIPMWMANRPKDLYTGENKHLIGGDVALARDEDINMMRKIRCYKGIRHETGQKVRGQ 131

Query: 102 RTHTNARTRKKFG 114
           RT +  RT    G
Sbjct: 132 RTKSTGRTGTTVG 144


>gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
 gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
 gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3]
 gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188]
          Length = 155

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITSEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|324525495|gb|ADY48555.1| 40S ribosomal protein S18 [Ascaris suum]
          Length = 154

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   +R  +L E ++ ++ Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINKRAGELTEEDMEKLTQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PKQYKIPNWFLNRQKDIKDGKYTQCLSTALDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
 gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
 gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18]
          Length = 155

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|118372788|ref|XP_001019588.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
           thermophila]
 gi|319443368|pdb|2XZM|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 1
 gi|319443403|pdb|2XZN|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 2
 gi|89301355|gb|EAR99343.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
           thermophila SB210]
 gi|315570327|tpg|DAA33982.1| TPA_exp: 40S ribosomal protein rpS18e [Tetrahymena thermophila]
          Length = 155

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           RI   NI   +    AL  I GIG + +  IC  L I P  R   L E +  +I   I  
Sbjct: 16  RILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75

Query: 62  --------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               ++YQ+  + L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 76  PEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRG 135

Query: 101 QRTHTNAR 108
           Q T T+ R
Sbjct: 136 QHTKTSGR 143


>gi|311334520|emb|CBN08641.1| 40S ribosomal protein S18 [Microcosmus squamiger]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 30/134 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + RI+  NI   ++++ A+  + G+G + S  IC K  +   +R  +L + E   V+ I 
Sbjct: 12  ILRISNTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIM 71

Query: 58  QAIEQ----DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
           Q   Q    D+                   Q++  LR     + +R+  +  +RGLRH  
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKFSQVLSNQLDNKLRE----DTERMKKIRAHRGLRHYW 127

Query: 95  GLPVRGQRTHTNAR 108
           GL VRGQ T T  R
Sbjct: 128 GLRVRGQHTKTTGR 141


>gi|303244311|ref|ZP_07330648.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1]
 gi|302485438|gb|EFL48365.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1]
          Length = 168

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           E  + +E DL  TV  +I  +  + CYRG+RH  GLP RGQRT  + R
Sbjct: 110 EDKHLIETDLMLTVQEDITTMKKIRCYRGIRHELGLPCRGQRTRGSFR 157


>gi|189208913|ref|XP_001940789.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976882|gb|EDU43508.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 155

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ + T  R
Sbjct: 134 RGQHSKTTGR 143


>gi|299751837|ref|XP_002911694.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130]
 gi|298409557|gb|EFI28200.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130]
          Length = 156

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTII 74

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     ++YQ+  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKNYQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|54039447|sp|Q962R1|RS18_SPOFR RecName: Full=40S ribosomal protein S18
 gi|15213824|gb|AAK92187.1|AF400215_1 ribosomal protein S18 [Spodoptera frugiperda]
 gi|48958395|dbj|BAD23920.1| ribosomal protein S18 [Antheraea yamamai]
 gi|268306384|gb|ACY95313.1| ribosomal protein S18 [Manduca sexta]
 gi|315115383|gb|ADT80664.1| ribosomal protein S18 [Euphydryas aurinia]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI   ++V+ A+  I G+G + S  +  K  I  ++R  +  E EV +I    
Sbjct: 12  ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
              RQ    D+        V+G   +  + N+        +RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|299115551|emb|CBN75754.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 192

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  +L  I G+G + +  IC K  + P +R  ++   E+ ++   I
Sbjct: 52  ILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAII 111

Query: 61  EQ-------DY----QVEGDLRRTVAM-----------NIKRLMDLGCYRGLRHRRGLPV 98
           +        D+    Q +    +T  +           +++RL  +  +RG+RH  G+ V
Sbjct: 112 QNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRV 171

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ T T  R  K    GG
Sbjct: 172 RGQHTKTTGRRGKIVAAGG 190


>gi|115661694|ref|XP_001202116.1| PREDICTED: similar to ribosomal protein S18, partial
           [Strongylocentrotus purpuratus]
 gi|115689720|ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial
           [Strongylocentrotus purpuratus]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I G+G + +   C K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|112984000|ref|NP_001037269.1| ribosomal protein S18 [Bombyx mori]
 gi|49532882|dbj|BAD26676.1| Ribosomal protein S18 [Plutella xylostella]
 gi|54609321|gb|AAV34876.1| ribosomal protein S18 [Bombyx mori]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI   ++V+ A+  I G+G + S  +  K  I  ++R  +  E EV +I    
Sbjct: 12  ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
              RQ    D+        V+G   +  + N+        +RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|242211468|ref|XP_002471572.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
 gi|220729344|gb|EED83220.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
          Length = 156

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTII 74

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + ++         +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQRDIVDGKNSQILSNSVDSKIRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|307165872|gb|EFN60227.1| 40S ribosomal protein S18 [Camponotus floridanus]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I      
Sbjct: 14  RVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 73

Query: 57  -RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+        V+G   +  + N+        +R+  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|255629053|gb|ACU14871.1| unknown [Glycine max]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I GIG + +   C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELSAAELDSVMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|255087650|ref|XP_002505748.1| ribosomal protein S18 [Micromonas sp. RCC299]
 gi|226521018|gb|ACO67006.1| ribosomal protein S18 [Micromonas sp. RCC299]
          Length = 145

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   N+    +V+ AL  I GIG + S  +C K  I   +R  +L  +E+  +    
Sbjct: 12  ILRVLNTNVDGRTKVMYALTQIRGIGRRFSNVVCKKAEIDMGKRAGELSAAELESLMVIV 71

Query: 57  --------------RQAIEQD----YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                         RQ   +D     QV   L  ++  +++RL  +  +RGLRH  G+ V
Sbjct: 72  SNPRQFRIPDWFLNRQKNYKDGKYIQQVSNQLDTSLRDDLERLKKIRNHRGLRHYWGIRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|50344504|emb|CAH04338.1| S18e ribosomal protein [Timarcha balearica]
          Length = 152

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI G NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  E EV +I    
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYSNLVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 57  ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +  I+  Y       L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|156542046|ref|XP_001601390.1| PREDICTED: similar to S18e ribosomal protein [Nasonia vitripennis]
          Length = 165

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I      
Sbjct: 27  RVVGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 86

Query: 57  -RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+        V+G   +  + N+        +R+  +  +RGLRH  GL VRG
Sbjct: 87  PRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 146

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 147 QHTKTTGR 154


>gi|242772774|ref|XP_002478105.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500]
 gi|218721724|gb|EED21142.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500]
          Length = 163

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R   +   E+ +I   I
Sbjct: 22  IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 81

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + ++         +++RL  +  +RGLRH  GL V
Sbjct: 82  QNPTQYKIPSWFLNRQRDIVDGKDSQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 141

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 142 RGQHTKTTGR 151


>gi|11466475|ref|NP_038178.1| ribosomal protein S13 [Chrysodidymus synuroideus]
 gi|7110472|gb|AAF36944.1|AF222718_18 ribosomal protein S13 [Chrysodidymus synuroideus]
          Length = 112

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 23/33 (69%)

Query: 81  LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
              +  Y+  R+  G P+RGQRTHTNA+T+KKF
Sbjct: 64  FYKIKNYKNFRNLLGYPIRGQRTHTNAKTKKKF 96


>gi|70909571|emb|CAJ17207.1| ribosomal protein S18e [Curculio glandium]
          Length = 152

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI G NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  E EV +I    
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 57  ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +  ++  Y       L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|297618742|ref|YP_003706847.1| ribosomal protein S13P [Methanococcus voltae A3]
 gi|297377719|gb|ADI35874.1| ribosomal protein S13P [Methanococcus voltae A3]
          Length = 149

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  I GIG   ++ I     + P+ +   + + EV +I   +E 
Sbjct: 11  RISKTDLKGESPLEYALQEIKGIGRAMARAIIRLTELDPKVQAGYIGDEEVAKIESVLED 70

Query: 63  ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  L CYRG+RH   LP RG
Sbjct: 71  PAKHGIPSWMFNRKKDVYSGLDKHLIETDLTMTVQEDITTMKKLRCYRGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFG 114
           QRT  + R     G
Sbjct: 131 QRTRGSFRKGSSMG 144


>gi|219128444|ref|XP_002184423.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404224|gb|EEC44172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 146

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   + VV  L  I GIG + S  IC K  +  ++R  +L   E+ ++   I
Sbjct: 14  ILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVI 73

Query: 61  EQDYQVE--------------GDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98
           +   Q +              G   +  A N        I+RL  +  +RGLRH   + V
Sbjct: 74  QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIRAHRGLRHWWNIRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T +  R R
Sbjct: 134 RGQHTCSTGRRR 145


>gi|296081217|emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 54  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 113

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 114 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 173

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 174 RGQHTKTTGRRGKTV---GVSKKR 194


>gi|325182081|emb|CCA16534.1| 40S ribosomal protein S18 putative [Albugo laibachii Nc14]
          Length = 152

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++   AL  I GIG + +  IC K  +   +R  +L   E+ ++   I
Sbjct: 12  ILRILNTNIDGRRKCWIALTSIAGIGRRFAILICKKAEVDITKRAGELSNDEIERLVAII 71

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+       V  +L+  +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPLQFKIPVWFLNRKKDYKTGKHSQAVANNLQGKLREDLERLKKIHTHRGLRHCWGLKV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
 gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
          Length = 155

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDINDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|12232348|gb|AAG47944.1| ribosomal protein S18 [Cherax destructor]
          Length = 142

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   ++V+ A+  I G+G + S  +  K  I   +R  ++ E EV +I      
Sbjct: 4   RLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSN 63

Query: 57  -RQAIEQDY--------------QV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+              QV   +L   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 64  PRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRVRG 123

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 124 QHTKTTGR 131


>gi|72095995|ref|XP_794924.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus
           purpuratus]
 gi|115959683|ref|XP_001190162.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus
           purpuratus]
          Length = 176

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++++ AL  I G+G + +   C K  I   +R  +L + EV ++   ++ 
Sbjct: 38  RVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTILQN 97

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +  +L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 98  PRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRVRG 157

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 158 QHTKTTGR 165


>gi|88799197|ref|ZP_01114777.1| 30S ribosomal protein S13 [Reinekea sp. MED297]
 gi|88778180|gb|EAR09375.1| 30S ribosomal protein S13 [Reinekea sp. MED297]
          Length = 35

 Score = 45.1 bits (105), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/27 (77%), Positives = 22/27 (81%)

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRK 111
           G YRG+RHRR LPVRGQ T  NARTRK
Sbjct: 1   GLYRGIRHRRNLPVRGQNTKNNARTRK 27


>gi|116207686|ref|XP_001229652.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51]
 gi|88183733|gb|EAQ91201.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51]
          Length = 156

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 14  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERLVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D Q+  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTAYKIPSWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|328899750|gb|AEB54647.1| ribosomal protein S18 [Procambarus clarkii]
          Length = 152

 Score = 45.1 bits (105), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   ++V+ A+  I G+G + S  +  K  I   +R  ++ E EV +I      
Sbjct: 14  RLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIMSN 73

Query: 57  -RQAIEQDY--------------QV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+              QV   +L   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|71747446|ref|XP_822778.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927]
 gi|71747448|ref|XP_822779.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927]
 gi|70832446|gb|EAN77950.1| 40S ribosomal protein S18, putative [Trypanosoma brucei]
 gi|70832447|gb|EAN77951.1| 40S ribosomal protein S18, putative [Trypanosoma brucei]
 gi|261332570|emb|CBH15565.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
           DAL972]
 gi|261332571|emb|CBH15566.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 153

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + GIG + +  +C K  +  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSPEELEKISEVI 72

Query: 61  EQDYQV---EGDLRR------------TVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
               +    E  L R            T +M       +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPEWFLNRQRDPKTGKTEHLTSSMVDTRLREDLERLRKIRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 133 RGQHTCTSGRRGKTVG 148


>gi|322490674|emb|CBZ25936.1| putative 40S ribosomal protein S18 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322490675|emb|CBZ25937.1| putative 40S ribosomal protein S18 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 153

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVAFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 133 RGQHTCTSGRHGKTVG 148


>gi|255731334|ref|XP_002550591.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
 gi|240131600|gb|EER31159.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
          Length = 133

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61
           +   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   ++  
Sbjct: 5   LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 64

Query: 62  ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101
                       Q  QV+G     +A N++        RL  +  +RG+RH  GL VRGQ
Sbjct: 65  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 124

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 125 HTKTTSRGR 133


>gi|217075242|gb|ACJ85981.1| unknown [Medicago truncatula]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   +++  A+  I GIG + +   C K  +   +R  +L  +E+  I   +  
Sbjct: 14  RVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|68471071|ref|XP_720312.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
 gi|77022566|ref|XP_888727.1| hypothetical protein CaO19_7018 [Candida albicans SC5314]
 gi|46442174|gb|EAL01465.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
 gi|76573540|dbj|BAE44624.1| hypothetical protein [Candida albicans]
          Length = 135

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61
           +   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   ++  
Sbjct: 7   LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 66

Query: 62  ------------QDYQVEGDLRRTVAMNIK--------RLMDLGCYRGLRHRRGLPVRGQ 101
                       Q  QV+G     +A N++        RL  +  +RG+RH  GL VRGQ
Sbjct: 67  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 126

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 127 HTKTTSRGR 135


>gi|330932805|ref|XP_003303916.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1]
 gi|311319761|gb|EFQ87978.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1]
          Length = 155

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ ++   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ + T  R
Sbjct: 134 RGQHSKTTGR 143


>gi|164429137|ref|XP_956794.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
 gi|157072424|gb|EAA27558.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
 gi|289618437|emb|CBI55161.1| unnamed protein product [Sordaria macrospora]
          Length = 156

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIM 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D Q+  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|45358882|ref|NP_988439.1| 30S ribosomal protein S13P [Methanococcus maripaludis S2]
 gi|74553909|sp|Q6LXN1|RS13_METMP RecName: Full=30S ribosomal protein S13P
 gi|45047748|emb|CAF30875.1| SSU ribosomal protein S13 [Methanococcus maripaludis S2]
          Length = 149

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 31/145 (21%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CY+G+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKG---GVARKR 122
           Q      RTR  F KG   GV RK+
Sbjct: 131 Q------RTRGSFRKGTSMGVKRKK 149


>gi|70909575|emb|CAJ17208.1| ribosomal protein S18e [Sphaerius sp. APV-2005]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI   ++V+ AL  I GIG + S  +  K  +  ++R  +  E EV +I    
Sbjct: 12  ILRIMNTNIEGNRKVMFALTAIKGIGRRYSNIVLKKADVDLDKRAGECSEEEVEKIVTIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
              RQ    D+        V+G   +  + N+        +R+  +  +RG+RH  GL V
Sbjct: 72  QVPRQFKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|296411741|ref|XP_002835588.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629374|emb|CAZ79745.1| unnamed protein product [Tuber melanosporum]
          Length = 216

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 75  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTII 134

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 135 QNPTQYKIPTWFLNRQRDIIDGKDSQILANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 194

Query: 99  RGQRTHTNAR 108
           RGQ + T  R
Sbjct: 195 RGQHSKTTGR 204


>gi|76573321|gb|ABA46765.1| unknown [Solanum tuberosum]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 27/143 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I GIG + +   C K  I   +R  +L  +E+  +   +  
Sbjct: 14  RVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMSKRAGELTAAELDSLMVVVAN 73

Query: 61  -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99
                        ++DY+ +G   +  +         +++RL  +  +RGLRH  GL VR
Sbjct: 74  PRQFKIPDWFLNRQKDYK-DGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQ T T  R  K     GV++KR
Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152


>gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
 gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
 gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
 gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
 gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
 gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
 gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
          Length = 155

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|281211011|gb|EFA85177.1| 40S ribosomal protein S18 [Polysphondylium pallidum PN500]
          Length = 154

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++++ AL  + GIG + +  +C K  +  ++R  +L + EV ++   +
Sbjct: 12  IIRIYNTNVDGRRKIMYALTNVKGIGRRFANLVCKKADVDLQKRAGELSKDEVERLTTIL 71

Query: 61  EQDYQV--------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
               Q               +G   + +A         +++RL  +  +RG+RH  GL V
Sbjct: 72  NHPRQYNIPAWFLNRQKDIKDGKYSQALANQLDVKYREDLERLKKIRAHRGIRHHMGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ+T T  R
Sbjct: 132 RGQKTKTTGR 141


>gi|15668361|ref|NP_247157.1| 30S ribosomal protein S13P [Methanocaldococcus jannaschii DSM 2661]
 gi|3334492|sp|P54019|RS13_METJA RecName: Full=30S ribosomal protein S13P
 gi|2826258|gb|AAB98169.1| SSU ribosomal protein S13P (rpsM) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 150

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48
           + R++  ++   K+++ AL  I+G+G   ++ I     + P +    L            
Sbjct: 9   LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 68

Query: 49  -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                  + S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP 
Sbjct: 69  ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 128

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 129 RGQRTKSTFR 138


>gi|217071380|gb|ACJ84050.1| unknown [Medicago truncatula]
          Length = 152

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++  A+  I GIG + +   C K  +   +R  +L  +E+  I   +
Sbjct: 12  ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTVAELENIMTVV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|223469633|gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +  
Sbjct: 14  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +   RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNPRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV++KR
Sbjct: 134 QHTKTTGRRGKTV---GVSKKR 152


>gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
 gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
          Length = 155

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|260942527|ref|XP_002615562.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
 gi|238850852|gb|EEQ40316.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
          Length = 117

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 22/115 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIRQAIEQ------------ 62
           AL  I G+G + S  +C K  +   +R  +L + E   V+ I Q   Q            
Sbjct: 3   ALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPTQYKIPAWFLNRQK 62

Query: 63  ------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
                 DY V   +L   +  +++RL  +  +RG+RH  GL VRGQ T T +R R
Sbjct: 63  DHVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQHTKTTSRGR 117


>gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H]
 gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H]
          Length = 156

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + RI   N+   ++V  AL  I GIG + +  IC +  +   +R  +L   E+   + I 
Sbjct: 14  ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73

Query: 58  QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
            A  Q    D+ +       EG     +A         +++R+  +  +RGLRH  GL V
Sbjct: 74  NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|50344500|emb|CAH04336.1| S18e ribosomal protein [Cicindela campestris]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI G NI   ++V+ A+  I G+G + +  +  K  +  ++R  +  E EV +I    
Sbjct: 12  ILRILGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
              RQ    D+        V+G   +  + N+        +R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|50344502|emb|CAH04337.1| S18e ribosomal protein [Dascillus cervinus]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI G NI   ++V+ AL  I G+G + +  +  K  +  ++R  +  E EV +I    
Sbjct: 12  ILRIMGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVA--MNIKRLMDLG------CYRGLRHRRGLPV 98
              RQ    D+        V+G   +  +  ++ K   DLG       +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLGRMKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|312219643|emb|CBX99586.1| hypothetical protein [Leptosphaeria maculans]
          Length = 233

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ ++   I+ 
Sbjct: 94  RLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTIIQN 153

Query: 63  DYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100
             Q              V+G   + +A         +++RL  +  +RGLRH  GL VRG
Sbjct: 154 PLQYKIPAWFLNRQRDIVDGKNSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRVRG 213

Query: 101 QRTHTNAR 108
           Q + T  R
Sbjct: 214 QHSKTTGR 221


>gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax SaI-1]
 gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax]
          Length = 156

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59
           RI   N+   ++V  AL  I GIG + +  IC +  +   +R  +L   E+   + I  A
Sbjct: 16  RILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIMNA 75

Query: 60  IEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100
             Q    D+ +       EG     +A         +++R+  +  +RGLRH  GL VRG
Sbjct: 76  PSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRVRG 135

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 136 QHTKTTGR 143


>gi|187119176|ref|NP_001119689.1| ribosomal protein S18 [Acyrthosiphon pisum]
 gi|89473736|gb|ABD72680.1| putative ribosomal protein S18 [Acyrthosiphon pisum]
 gi|239788236|dbj|BAH70806.1| ACYPI000081 [Acyrthosiphon pisum]
 gi|326493984|dbj|BAJ85454.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522712|dbj|BAJ88402.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ A+  I GIG + S  +  K  +   +R  +  + EV +I   +
Sbjct: 12  ILRILSTNIDGKRKVMFAMTAIKGIGRRFSNIVLKKADVDLNKRAGECTDEEVEKIITIM 71

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +  +         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVVDGKFSQLTSSTLDSKLREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|61252180|sp|P0A4B0|RS13_LACLC RecName: Full=30S ribosomal protein S13
 gi|97982|pir||S17990 ribosomal protein S13 - Lactococcus lactis subsp. lactis
          (fragment)
 gi|44077|emb|CAA41943.1| ribosomal protein S13 [Lactococcus lactis]
          Length = 51

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL 48
          MAR AGV+IP  KR+V +L Y+ G+G ++S+ +     +  + R   L
Sbjct: 1  MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDL 48


>gi|2129263|pir||F64323 ribosomal protein S18 - Methanococcus jannaschii
          Length = 186

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL------------ 48
           + R++  ++   K+++ AL  I+G+G   ++ I     + P +    L            
Sbjct: 45  LIRVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVL 104

Query: 49  -------VESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                  + S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP 
Sbjct: 105 ADPAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPC 164

Query: 99  RGQRTHTNAR 108
           RGQRT +  R
Sbjct: 165 RGQRTKSTFR 174


>gi|62083469|gb|AAX62459.1| ribosomal protein S18 [Lysiphlebus testaceipes]
          Length = 155

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   NI   +++  AL  I G+G + +  +  K  I  ++R  +  E E+ +I   I
Sbjct: 15  MLRVMSTNIDGNRKITLALTDIKGVGRRYADMVVKKADIALQKRAGECTEEEIEKIVTII 74

Query: 61  EQ-------DY-------QVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
                    DY       +V+G   +            +++RL  +  ++GLRH  GL V
Sbjct: 75  ANPRHYKIPDYYLNRQKDKVDGKYSQLTGSSVDSKLREDLERLKKIRAHKGLRHYWGLRV 134

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 135 RGQHTKTTGR 144


>gi|225678479|gb|EEH16763.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb03]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 60  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 119

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV  + +   +  +++RL  +  +RGLRH  GL V
Sbjct: 120 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 179

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 180 RGQHTKTTGR 189


>gi|210075787|ref|XP_503080.2| YALI0D20614p [Yarrowia lipolytica]
 gi|199425832|emb|CAG81272.2| YALI0D20614p [Yarrowia lipolytica]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ A+C I G+G + +  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGELTVEELERIVTII 73

Query: 61  EQ--DYQVEG--------------------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +    Y++ G                     L   +  +I+RL  +  +RGLRH  G  V
Sbjct: 74  QNPGQYKIPGWFLNRQRDFTDGKDSQLLVNQLDVKLRDDIERLKKIRAHRGLRHYWGYKV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTTR 143


>gi|307109786|gb|EFN58023.1| 40S ribosomal protein S18 [Chlorella variabilis]
          Length = 153

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+   ++++ AL  I GIG + S   C K  +   +R  +L   E+  I   +  
Sbjct: 15  RVLNTNVDGKQKIMYALTAIKGIGRRFSNICCKKAEVDLNKRAGELSAEELESIMTIVAN 74

Query: 63  -------DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                  D+              QV    L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 75  PRAYKIPDWFLNRQKDVKDGRYSQVTSSALDTKLRDDLERLKKIRNHRGLRHYWGLTVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GVA+K+
Sbjct: 135 QHTKTTGRRGKTV---GVAKKK 153


>gi|159475653|ref|XP_001695933.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii]
 gi|158275493|gb|EDP01270.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii]
          Length = 124

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           AL  + G+G  +S  +     I  + +V  + +S + ++   IE ++     L+R V  N
Sbjct: 18  ALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYIEANFVTGDTLKRQVREN 77

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           +   + +   RG+RH  GLPV   +T +N    +K 
Sbjct: 78  VLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKL 113


>gi|157124077|ref|XP_001660320.1| 40S ribosomal protein S18 [Aedes aegypti]
 gi|94468520|gb|ABF18109.1| ribosomal protein S18 [Aedes aegypti]
 gi|108874121|gb|EAT38346.1| 40S ribosomal protein S18 [Aedes aegypti]
          Length = 152

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  E EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSEEEVEKIVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|261884953|ref|ZP_06008992.1| hypothetical protein CfetvA_06945 [Campylobacter fetus subsp.
          venerealis str. Azul-94]
          Length = 29

 Score = 44.3 bits (103), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/26 (76%), Positives = 22/26 (84%)

Query: 66 VEGDLRRTVAMNIKRLMDLGCYRGLR 91
          VEGDL  +VAM+IK LMDLG YRGLR
Sbjct: 2  VEGDLTESVAMDIKALMDLGSYRGLR 27


>gi|302789830|ref|XP_002976683.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
 gi|300155721|gb|EFJ22352.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVAN 73

Query: 61  -------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++DY+       V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++KR
Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152


>gi|289191583|ref|YP_003457524.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22]
 gi|288938033|gb|ADC68788.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22]
          Length = 150

 Score = 43.9 bits (102), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           E  + +E DL      +I RL  + CYRG+RH  GLP RGQRT +  R
Sbjct: 91  EDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRGQRTRSTFR 138


>gi|71666149|ref|XP_820037.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
 gi|71666187|ref|XP_820056.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
 gi|70885364|gb|EAN98186.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
 gi|70885383|gb|EAN98205.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
          Length = 153

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 72

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       T AM       +++RL     +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 133 RGQHTCTSGRHGKTVG 148


>gi|322827919|gb|EFZ31897.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
          Length = 154

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 14  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 73

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       T AM       +++RL     +RG+RH  GL V
Sbjct: 74  ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 133

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 134 RGQHTCTSGRHGKTVG 149


>gi|330845753|ref|XP_003294736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
 gi|325074743|gb|EGC28736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
          Length = 154

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V+ AL  + G+G + +  +C K  +   +R  +L + EV ++   +
Sbjct: 12  IIRIYNTNVDGRRKVMYALMCVKGVGKRFADLVCKKADVDTSKRAGELSKDEVERLTTIM 71

Query: 61  EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q               +G   + +A  I        +RL  +  +RG+RH  GL V
Sbjct: 72  NHPRQYNIPTWFLNRQKDIKDGKYSQCLANQIDVKFREDLERLKKIRAHRGIRHHFGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T T  R  +     GVA+KR
Sbjct: 132 RGQKTKTTGRRGRTV---GVAKKR 152


>gi|302023186|ref|ZP_07248397.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68]
          Length = 44

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/31 (61%), Positives = 25/31 (80%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQ 31
          MARIAGV+IP  KRVV +L Y++GIG  +S+
Sbjct: 1  MARIAGVDIPNDKRVVISLTYVYGIGLATSK 31


>gi|150399381|ref|YP_001323148.1| 30S ribosomal protein S13P [Methanococcus vannielii SB]
 gi|150012084|gb|ABR54536.1| ribosomal protein S13 [Methanococcus vannielii SB]
          Length = 149

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 31/145 (21%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEVKGIGRAMAKALIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL   V  +I  +  + CYRG+RH   LP RG
Sbjct: 71  PAKHGIPSWMFNRKKDVYTGLDKHLIETDLVLAVQEDIGNMKKIRCYRGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKG---GVARKR 122
           Q      RTR  F KG   GV RK+
Sbjct: 131 Q------RTRGSFRKGSTMGVKRKK 149


>gi|143450|gb|AAA22706.1| ribosomal protein S13 [Bacillus subtilis]
          Length = 36

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/25 (80%), Positives = 22/25 (88%)

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRK 111
           YRG+RHRRGLPVRGQ +  NARTRK
Sbjct: 1   YRGIRHRRGLPVRGQNSKNNARTRK 25


>gi|320170357|gb|EFW47256.1| ribosomal protein S18 [Capsaspora owczarzaki ATCC 30864]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    ++  AL  I G+G + S  +C K  I  ++R  ++ E+EV ++   +
Sbjct: 12  ILRMLNTNIDGKVKIPFALTKIKGVGRRYSNLVCKKADIDLKKRAGEVNEAEVERLLSIL 71

Query: 61  E--------------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +              Q   V+G   + ++         +I+RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRSYKIPDWFLNRQKDIVDGKTSQVLSNGLDNKLREDIERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ T T  R  +  G G 
Sbjct: 132 RGQHTKTTGRHGRTVGVGA 150


>gi|154345580|ref|XP_001568727.1| 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|154345582|ref|XP_001568728.1| 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066069|emb|CAM43857.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066070|emb|CAM43858.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 153

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ ++ + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKTGIDVERRAGTLTAEELEKVAEVI 72

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 73  VDPARFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 133 RGQHTCTSGRHGKTVG 148


>gi|40287492|gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 27/143 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ A+  I GIG + +   C K  I   +R  +L  +E+  +   +  
Sbjct: 14  RVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGELSAAELDSLMVVVAN 73

Query: 61  -------------EQDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVR 99
                        ++DY+ +G   +  +         +++RL  +  +RGLRH  GL VR
Sbjct: 74  PRQFKIPDWFLNRQKDYK-DGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVR 132

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQ T T  R  K     GV++KR
Sbjct: 133 GQHTKTTGRRGKTV---GVSKKR 152


>gi|124783098|gb|ABN14904.1| ribosomal protein S18 [Taenia asiatica]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 12  ILRVMNTNIDGQRKITYALTAIKGVGRRYATVVCKKADVDIRKRAGELTDDEIEKIVTVM 71

Query: 61  EQDYQV--------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
               Q               +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPNWFLNRQKDIEDGKHTQLLAQGLDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|157876642|ref|XP_001686666.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin]
 gi|68129741|emb|CAJ09047.1| putative 40S ribosomal protein S18 [Leishmania major strain
           Friedlin]
          Length = 153

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 133 RGQHTCTSGRHGKTVG 148


>gi|212531369|ref|XP_002145841.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
 gi|210071205|gb|EEA25294.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
          Length = 155

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R   +   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 73

Query: 61  E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +D QV    +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|194753476|ref|XP_001959038.1| ribosomal protein S18 [Drosophila ananassae]
 gi|190620336|gb|EDV35860.1| ribosomal protein S18 [Drosophila ananassae]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              V+G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIVDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|41018060|sp|Q8IT98|RS18_AEQIR RecName: Full=40S ribosomal protein S18
 gi|22758908|gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians]
          Length = 152

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   ++++ A+  I G+G + +  +C K  +   +R  +L E E+ ++      
Sbjct: 14  RVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSN 73

Query: 57  ------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                       RQ   +D +    +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GVA+K+
Sbjct: 134 QHTKTTGRRGRTV---GVAKKK 152


>gi|171686194|ref|XP_001908038.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943058|emb|CAP68711.1| unnamed protein product [Podospora anserina S mat+]
          Length = 219

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +  ++R  +L   E+ ++   I
Sbjct: 77  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTII 136

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +                  V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 137 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 196

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 197 RGQHTKTTGR 206


>gi|159145688|gb|ABW90381.1| putative ribosomal protein S18 [Sipunculus nudus]
          Length = 152

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +C K  +   +R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGKRKIAFAMTAIKGVGRRYATIVCKKADVDVTKRAGELSDDEVEKLITVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPNWFLNRQKDVKDGKFSQVMSNQLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|221122256|ref|XP_002155929.1| PREDICTED: similar to ribosomal protein S18 isoform 1 [Hydra
           magnipapillata]
 gi|221122258|ref|XP_002155978.1| PREDICTED: similar to ribosomal protein S18 isoform 2 [Hydra
           magnipapillata]
          Length = 155

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI    +++ A+  I G+G + S     K  I  ++R  +L + EV   I I 
Sbjct: 12  ILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIM 71

Query: 58  QAIEQ----DYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    DY +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDYFLNRQKDIKDGKYTQVLANALDNKLREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 132 RGQHTKTTGRKGRTVG 147


>gi|134045319|ref|YP_001096805.1| 30S ribosomal protein S13P [Methanococcus maripaludis C5]
 gi|132662944|gb|ABO34590.1| SSU ribosomal protein S13P [Methanococcus maripaludis C5]
          Length = 149

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 22/134 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CY+G+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGVRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFG 114
           QRT  + R     G
Sbjct: 131 QRTRGSFRKGTSMG 144


>gi|66548968|ref|XP_625104.1| PREDICTED: 40S ribosomal protein S18 [Apis mellifera]
          Length = 152

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I      
Sbjct: 14  RVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMAN 73

Query: 57  -RQAIEQDYQ-------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+        V+G   +  +         +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLERMKKIRAHRGLRHYWGLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|121544007|gb|ABM55667.1| putative ribosomal protein S18 [Maconellicoccus hirsutus]
          Length = 152

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI    +++ AL  I GIG + S  +  K  +  ++R  +  + EV +I    
Sbjct: 12  ILRIMNTNIDGKIKIMFALTAIKGIGRRFSNVVLKKADVDLDKRAGECSDEEVEKIITIM 71

Query: 57  ---RQAIEQDYQV---------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +                 +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  TNPRQFKIPDWFLNRQKDIVDGKYLQLASSNLDSKIREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|211938661|gb|ACJ13227.1| FI09342p [Drosophila melanogaster]
          Length = 170

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 30  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 89

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 90  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 149

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 150 RGQHTKTTGR 159


>gi|195380645|ref|XP_002049081.1| ribosomal protein S18 [Drosophila virilis]
 gi|194143878|gb|EDW60274.1| ribosomal protein S18 [Drosophila virilis]
          Length = 152

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|146103213|ref|XP_001469509.1| 40S ribosomal protein S18 [Leishmania infantum]
 gi|134073879|emb|CAM72618.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
          Length = 153

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  K  G
Sbjct: 133 RGQHTCTTGRHGKTVG 148


>gi|21392218|gb|AAM48463.1| RH43343p [Drosophila melanogaster]
          Length = 152

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|307195851|gb|EFN77647.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|307195853|gb|EFN77649.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|307195858|gb|EFN77654.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|332020747|gb|EGI61151.1| 40S ribosomal protein S18 [Acromyrmex echinatior]
          Length = 137

 Score = 43.5 bits (101), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 22/125 (17%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQ 58
           G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I       RQ
Sbjct: 2   GTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQ 61

Query: 59  AIEQDYQ-------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPVRGQRT 103
               D+        V+G   +  + N+        +R+  +  +RGLRH  GL VRGQ T
Sbjct: 62  YKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRGQHT 121

Query: 104 HTNAR 108
            T  R
Sbjct: 122 KTTGR 126


>gi|223994887|ref|XP_002287127.1| RS18, ribosomal protein 18 40S small ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
 gi|220976243|gb|EED94570.1| RS18, ribosomal protein 18 40S small ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
          Length = 146

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   + VV  L  I G+G + +  IC K  I   +R  +L   E+ ++   I
Sbjct: 14  ILRILNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAII 73

Query: 61  EQDYQVE--------------GDLRRTVAMN--------IKRLMDLGCYRGLRHRRGLPV 98
           +   Q +              G   +  A N        I+R+  +  +RGLRH  G+ V
Sbjct: 74  QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNFDAKLRDDIERMKKIRAHRGLRHWWGIRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T +  R
Sbjct: 134 RGQHTCSTGR 143


>gi|186522813|ref|NP_001119224.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis
           thaliana]
 gi|332004634|gb|AED92017.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
          Length = 128

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVIQIRQAI 60
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +  E ++ + + E E+I +R  +
Sbjct: 48  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM--ENKITKDMAEEELIILRDEV 105

Query: 61  EQDYQVEGDL 70
            + Y +EGDL
Sbjct: 106 SK-YMIEGDL 114


>gi|17136882|ref|NP_476964.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
 gi|24656100|ref|NP_725943.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
 gi|194881531|ref|XP_001974884.1| ribosomal protein S18 [Drosophila erecta]
 gi|195336052|ref|XP_002034661.1| ribosomal protein S18 [Drosophila sechellia]
 gi|195486935|ref|XP_002091713.1| ribosomal protein S18 [Drosophila yakuba]
 gi|195585039|ref|XP_002082302.1| ribosomal protein S18 [Drosophila simulans]
 gi|730637|sp|P41094|RS18_DROME RecName: Full=40S ribosomal protein S18
 gi|349256|gb|AAA28870.1| ribosomal protein S18 [Drosophila melanogaster]
 gi|7302403|gb|AAF57491.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
 gi|21626903|gb|AAM68401.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
 gi|38047723|gb|AAR09764.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba]
 gi|38048391|gb|AAR10098.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba]
 gi|56201301|dbj|BAD72904.1| RpS18 [Drosophila simulans]
 gi|56201321|dbj|BAD72922.1| RpS18 [Drosophila sechellia]
 gi|90855595|gb|ABE01159.1| IP16603p [Drosophila melanogaster]
 gi|190658071|gb|EDV55284.1| ribosomal protein S18 [Drosophila erecta]
 gi|194126631|gb|EDW48674.1| ribosomal protein S18 [Drosophila sechellia]
 gi|194177814|gb|EDW91425.1| ribosomal protein S18 [Drosophila yakuba]
 gi|194194311|gb|EDX07887.1| ribosomal protein S18 [Drosophila simulans]
          Length = 152

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|264667373|gb|ACY71272.1| ribosomal protein S18 [Chrysomela tremulae]
          Length = 152

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI G NI   ++V+ AL  I G+G + +  +  K  +  ++R  +  + EV +I    
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSDEEVEKIITIM 71

Query: 57  ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +  I+  Y       L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIIDGKYSQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|15897041|ref|NP_341646.1| 30S ribosomal protein S13P [Sulfolobus solfataricus P2]
 gi|284173385|ref|ZP_06387354.1| 30S ribosomal protein S13P [Sulfolobus solfataricus 98/2]
 gi|2500459|sp|P95986|RS13_SULSO RecName: Full=30S ribosomal protein S13P
 gi|1707820|emb|CAA69528.1| ribosomal protein S18 [Sulfolobus solfataricus P2]
 gi|13813206|gb|AAK40436.1| SSU ribosomal protein S13AB (rps13AB) [Sulfolobus solfataricus P2]
 gi|261601695|gb|ACX91298.1| ribosomal protein S13P [Sulfolobus solfataricus 98/2]
          Length = 165

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++    ++  AL  + GIG+ +++ I  KL + P  R+ +L ++EV ++   I
Sbjct: 8   VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVI 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R      +RG+RH  GL V
Sbjct: 68  SDHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  RT       GVARK+
Sbjct: 128 RGQRTRTTGRTGMTI---GVARKK 148


>gi|145357113|ref|XP_001422767.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
 gi|144583010|gb|ABP01084.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
          Length = 144

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 22/133 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ +L  I GIG + S  +C K  I   +R  +L  +E+  +   +
Sbjct: 12  IIRVLNTNVDGREKVMYSLTKIKGIGRRFSNLVCKKAEIDLGKRAGELSAAELESLMVIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          + D++       V   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  SNPRQFRIPDWFLNRKHDFKDGKFSQLVSNQLDTKLRDDLERLKKMRNHRGLRHYWGIRV 131

Query: 99  RGQRTHTNARTRK 111
           RGQ T T  R R+
Sbjct: 132 RGQHTKTTGRGRR 144


>gi|268534940|ref|XP_002632603.1| C. briggsae CBR-RPS-18 protein [Caenorhabditis briggsae]
 gi|187022469|emb|CAP38284.1| CBR-RPS-18 protein [Caenorhabditis briggsae AF16]
          Length = 154

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  I   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVCCRKADIDVNKRAGELTEEDFDKIVTIMQN 73

Query: 63  DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100
             Q +                 G L  T   N     ++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|195124097|ref|XP_002006530.1| GI21106 [Drosophila mojavensis]
 gi|193911598|gb|EDW10465.1| GI21106 [Drosophila mojavensis]
          Length = 158

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 18  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 77

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 78  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 137

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 138 RGQHTKTTGR 147


>gi|301353227|ref|YP_003795224.1| ribosomal protein S13 [Proteromonas lacertae]
 gi|290573175|gb|ADD46362.1| ribosomal protein S13 [Proteromonas lacertae]
          Length = 129

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVI-----QIRQAIEQ 62
           NI     +   L  I+ I    +  ICNKL   P +++  + + + I        + +E+
Sbjct: 12  NIKLNINISELLTSIYSINLPKAIGICNKLGFNPNKQLKTIKDIDFILKILSNFLKLVEK 71

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR---GLPVRGQRTHTNARTRK 111
           + +++      +   I  L +L   + L++ R   GLPV GQRTH+N +  K
Sbjct: 72  NDKIKSKKLHNIET-IAYLNNLKNTKNLKYYRLKNGLPVHGQRTHSNGQIAK 122


>gi|116783572|gb|ABK23001.1| unknown [Picea sitchensis]
 gi|116784761|gb|ABK23462.1| unknown [Picea sitchensis]
 gi|116785907|gb|ABK23903.1| unknown [Picea sitchensis]
 gi|116790495|gb|ABK25635.1| unknown [Picea sitchensis]
 gi|116792192|gb|ABK26268.1| unknown [Picea sitchensis]
 gi|116792691|gb|ABK26459.1| unknown [Picea sitchensis]
 gi|116793924|gb|ABK26933.1| unknown [Picea sitchensis]
 gi|148907687|gb|ABR16972.1| unknown [Picea sitchensis]
 gi|148908291|gb|ABR17259.1| unknown [Picea sitchensis]
 gi|224284844|gb|ACN40152.1| unknown [Picea sitchensis]
          Length = 152

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQL--VESEVIQIRQ 58
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E E + I  
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKRAGELTALELENLMIIV 71

Query: 59  AIEQDYQV-------EGDLR--RTVAM-----------NIKRLMDLGCYRGLRHRRGLPV 98
           A  + +++       + D++  RT  +           +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPKQFKIPDWFLNRQKDIKDGRTTQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|56755399|gb|AAW25879.1| unknown [Schistosoma japonicum]
          Length = 157

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L + EV ++   +
Sbjct: 17  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 76

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RG+RH  GL V
Sbjct: 77  SNPSQSKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 136

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 137 RGQHTKTTGRRGRTV---GVSRKK 157


>gi|195431724|ref|XP_002063878.1| ribosomal protein S18 [Drosophila willistoni]
 gi|194159963|gb|EDW74864.1| ribosomal protein S18 [Drosophila willistoni]
          Length = 152

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  TNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|150401524|ref|YP_001325290.1| 30S ribosomal protein S13P [Methanococcus aeolicus Nankai-3]
 gi|150014227|gb|ABR56678.1| ribosomal protein S13 [Methanococcus aeolicus Nankai-3]
          Length = 149

 Score = 43.1 bits (100), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           +E DL   V  +I  +  + CYRG+RH  GLP RGQRT  + R
Sbjct: 96  IESDLTMAVQEDIATMKKIRCYRGIRHELGLPCRGQRTRGSFR 138


>gi|195057283|ref|XP_001995231.1| GH23036 [Drosophila grimshawi]
 gi|193899437|gb|EDV98303.1| GH23036 [Drosophila grimshawi]
          Length = 162

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 22  ILRIMSTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 81

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 82  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 141

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 142 RGQHTKTTGR 151


>gi|115390150|ref|XP_001212580.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
 gi|114194976|gb|EAU36676.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
          Length = 155

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ ++   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERVVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   + +    +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQRDITDGKDAHVLSNGVDQKAREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|296243122|ref|YP_003650609.1| 30S ribosomal protein S13P [Thermosphaera aggregans DSM 11486]
 gi|296095706|gb|ADG91657.1| SSU ribosomal protein S13P [Thermosphaera aggregans DSM 11486]
          Length = 162

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   +I  +  ++  L  + G+G+  S  I   L + P  R+  L + +V +I   +
Sbjct: 10  IIRVLETDIDGSLPLIYGLAEVKGLGYTFSLAITRILGLDPNTRIGYLSDEDVRKIEALV 69

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY        V  +L   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  KNPSSYGLPSWMFNRRKDYASGKDLHLVGAELIYYVKEDIEREKRVRSWRGVRHALGLKV 129

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 130 RGQRTRTTGR 139


>gi|282931689|ref|ZP_06337181.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1]
 gi|281304187|gb|EFA96297.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1]
          Length = 33

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 23/26 (88%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIG 26
          MARIAGV++PR KR+V AL YI+GIG
Sbjct: 4  MARIAGVDLPREKRIVVALTYIYGIG 29


>gi|157690762|tpe|CAL69108.1| TPA: putative 40S ribosomal protein S18 [Spadella cephaloptera]
          Length = 154

 Score = 43.1 bits (100), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++++ A+  I G G + S  +C K  +   +R  +L + EV ++    
Sbjct: 12  ILRVMNTNIDGRRKIMFAMTSIKGCGRRFSNIVCKKADVDMTKRAGELSDEEVERVVTIM 71

Query: 57  --------------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                         RQ   +D +    +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  NNPRQYKIPDWFLNRQKDVKDGKYSQVLSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|125809258|ref|XP_001361051.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
 gi|195154539|ref|XP_002018179.1| GL16906 [Drosophila persimilis]
 gi|54636224|gb|EAL25627.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
 gi|194113975|gb|EDW36018.1| GL16906 [Drosophila persimilis]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  TNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|213028320|ref|ZP_03342767.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 62

 Score = 42.7 bits (99), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60


>gi|146103218|ref|XP_001469510.1| 40S ribosomal protein S18 [Leishmania infantum]
 gi|134073880|emb|CAM72619.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
 gi|322503453|emb|CBZ38538.1| unnamed protein product [Leishmania donovani BPK282A1]
 gi|322503454|emb|CBZ38539.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 166

 Score = 42.7 bits (99), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 26  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 85

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 86  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 145

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  K  G
Sbjct: 146 RGQHTCTTGRHGKTVG 161


>gi|56758184|gb|AAW27232.1| SJCHGC01887 protein [Schistosoma japonicum]
 gi|226472372|emb|CAX77222.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472374|emb|CAX77223.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472376|emb|CAX77224.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472378|emb|CAX77225.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472380|emb|CAX77226.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472382|emb|CAX77227.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472384|emb|CAX77228.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472386|emb|CAX77229.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472388|emb|CAX77230.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473486|emb|CAX71428.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473488|emb|CAX71429.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473490|emb|CAX71430.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473492|emb|CAX71431.1| ribosomal protein S18 [Schistosoma japonicum]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L + EV ++    
Sbjct: 12  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 71

Query: 57  ---RQAIEQDY----QVEGD-----------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+    Q + D           L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152


>gi|170056800|ref|XP_001864194.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
 gi|167876481|gb|EDS39864.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIVTII 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q              ++G   +  + N+        +RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|17542018|ref|NP_502794.1| Ribosomal Protein, Small subunit family member (rps-18)
           [Caenorhabditis elegans]
 gi|3881192|emb|CAB16517.1| C. elegans protein Y57G11C.16, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 154

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  +   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQN 73

Query: 63  DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100
             Q +                 G L  T   N     ++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|15790213|ref|NP_280037.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1]
 gi|169235942|ref|YP_001689142.1| 30S ribosomal protein S13P [Halobacterium salinarum R1]
 gi|13124533|sp|Q9V2W4|RS13_HALSA RecName: Full=30S ribosomal protein S13P; AltName: Full=HS13
 gi|6172227|dbj|BAA85895.1| ribosomal protein HS13 [Halobacterium salinarum]
 gi|10580671|gb|AAG19517.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1]
 gi|167727008|emb|CAP13794.1| ribosomal protein S13 [Halobacterium salinarum R1]
          Length = 171

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  + G+G + ++ + ++  +     +  L +  +  +  A+
Sbjct: 16  FVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAV 75

Query: 61  E--------------------QDYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           +                    ++  + G D+  T   +I R+  +  Y+G+RH RG  VR
Sbjct: 76  DSFTEHAPAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVR 135

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 136 GQRTKSTGRTEGTIG 150


>gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata]
 gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata]
          Length = 154

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV AL  I G+G + +  +C +  +   +R  +L + E+ ++   I
Sbjct: 14  ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTQDEINKLVAII 73

Query: 61  EQ--DYQV-------EGDLRRTVAM-------------NIKRLMDLGCYRGLRHRRGLPV 98
               +++V       + D++    M             +++RL  +  +RGLRH  GL  
Sbjct: 74  SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|19113298|ref|NP_596506.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-]
 gi|162312104|ref|NP_588057.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|6831658|sp|O94754|RS18_SCHPO RecName: Full=40S ribosomal protein S18
 gi|4481957|emb|CAB38515.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe]
 gi|157310505|emb|CAB58414.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe]
          Length = 152

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ A+  I G+G + +  +C K  I   +R  +L   E+ +I   I
Sbjct: 12  ILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTII 71

Query: 61  EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G   + +A N+        +RL  +  +RGLRH   L V
Sbjct: 72  QNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  K  G
Sbjct: 132 RGQHTKTTGRRGKTVG 147


>gi|320581243|gb|EFW95464.1| ribosomal protein S18B [Pichia angusta DL-1]
          Length = 150

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIRQA 59
           R+   N+    +V+ AL  I G+G + +  +C K  +   +R  +L + E   ++ I Q 
Sbjct: 16  RLLNTNVDGRIKVMYALTTIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIMQN 75

Query: 60  IEQ------------------DYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                  DY V   +L   +  +++RL  +  +RGLRH   L VRG
Sbjct: 76  PTQYKIPAWFLNRQADVVDGKDYHVLANNLESKLREDLERLKRMRAHRGLRHSWRLRVRG 135

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 136 QHTKTTGR 143


>gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga]
 gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva]
          Length = 154

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV AL  I G+G + +  +C +  +   +R  +L + E+ ++   I
Sbjct: 14  ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDITKRAGELTQDEINKLVAII 73

Query: 61  EQ--DYQV-------EGDLRRTVAM-------------NIKRLMDLGCYRGLRHRRGLPV 98
               +++V       + D++    M             +++RL  +  +RGLRH  GL  
Sbjct: 74  SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri]
          Length = 152

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   ++++ A+  I GIG + +  +  K  +   +R  +L E EV ++      
Sbjct: 14  RVMNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIMSN 73

Query: 57  -RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+              QV  + L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRHYWGLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|11467079|ref|NP_042555.1| ribosomal protein S13 [Acanthamoeba castellanii]
 gi|1173315|sp|P46760|RT13_ACACA RecName: Full=Ribosomal protein S13, mitochondrial
 gi|562060|gb|AAD11848.1| ribosomal protein S13 [Acanthamoeba castellanii]
          Length = 119

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 18/26 (69%), Positives = 20/26 (76%)

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRKK 112
           Y G+RH   LPVRGQRTHTNA+T  K
Sbjct: 88  YTGMRHILKLPVRGQRTHTNAKTPSK 113


>gi|195610746|gb|ACG27203.1| 40S ribosomal protein S18 [Zea mays]
          Length = 126

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 25/127 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---------------EQ 62
           A+  I G+G + S  +C K  I   +R  +L   E+ ++   +               ++
Sbjct: 3   AMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPRQFKVPDWFLNRKK 62

Query: 63  DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           DY+       V   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K    
Sbjct: 63  DYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV-- 120

Query: 116 GGVARKR 122
            GV++KR
Sbjct: 121 -GVSKKR 126


>gi|157876640|ref|XP_001686665.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin]
 gi|66476122|gb|AAY51369.1| ribosomal protein S18 [Leishmania major]
 gi|68129740|emb|CAJ09046.1| putative 40S ribosomal protein S18 [Leishmania major strain
           Friedlin]
          Length = 218

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 78  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137

Query: 61  ---------------EQDYQVEGDLRRTVAM-------NIKRLMDLGCYRGLRHRRGLPV 98
                          ++D +       + +M       +++RL  +  +RG+RH  GL V
Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T+ R  K  G
Sbjct: 198 RGQHTCTSGRHGKTVG 213


>gi|308450179|ref|XP_003088206.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
 gi|308461679|ref|XP_003093129.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
 gi|308248781|gb|EFO92733.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
 gi|308250761|gb|EFO94713.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
          Length = 154

 Score = 42.0 bits (97), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  +   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELSEEDFDKIVTIMQN 73

Query: 63  DYQVE-----------------GDLRRTVAMN-----IKRLMDLGCYRGLRHRRGLPVRG 100
             Q +                 G L  T   N     ++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRKGRTVGVSKKKGG 154


>gi|66818921|ref|XP_643120.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
 gi|74926730|sp|Q869U7|RS18_DICDI RecName: Full=40S ribosomal protein S18
 gi|60471198|gb|EAL69161.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
          Length = 154

 Score = 42.0 bits (97), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +++  AL  + G+G + +  +C K  I   +R  +L + EV ++   +
Sbjct: 14  IIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIM 73

Query: 61  EQDYQV--------------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
               Q               +G     +A  I        +RL  +  +RG+RH  GL V
Sbjct: 74  NHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ+T T  R  +  G  G
Sbjct: 134 RGQKTKTTGRRGRTVGVAG 152


>gi|88604135|ref|YP_504313.1| 30S ribosomal protein S13P [Methanospirillum hungatei JF-1]
 gi|121721492|sp|Q2FT96|RS13_METHJ RecName: Full=30S ribosomal protein S13P
 gi|88189597|gb|ABD42594.1| SSU ribosomal protein S13P [Methanospirillum hungatei JF-1]
          Length = 151

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 21/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V+ +L  I G+G  +++ I     +     + +L E+ V +IR+ +
Sbjct: 11  FVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVV 70

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                 + + +  D+  TV  +I  L  +  YRG+RH  G  VR
Sbjct: 71  SNYADRIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVR 130

Query: 100 GQRTHTNART 109
           GQRT +  RT
Sbjct: 131 GQRTKSTGRT 140


>gi|147905776|ref|NP_001084747.1| ribosomal protein S18 [Xenopus laevis]
 gi|46329492|gb|AAH68873.1| MGC82306 protein [Xenopus laevis]
          Length = 152

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|242019380|ref|XP_002430139.1| ribosomal protein S18, putative [Pediculus humanus corporis]
 gi|212515230|gb|EEB17401.1| ribosomal protein S18, putative [Pediculus humanus corporis]
          Length = 137

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 22/124 (17%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---------- 56
            NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I          
Sbjct: 3   TNIDGKRKVMFAMTSIKGVGRRFANIVLKKADIDLDKRAGECSEEEVDKIITVLTNPRQY 62

Query: 57  --------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
                   RQ   QD +       +L   +  +++RL  +  +RG+RH  GL VRGQ T 
Sbjct: 63  KIPDWFLNRQKDIQDGKYSQLTSTNLDSKLREDLERLKKIKAHRGMRHYWGLRVRGQHTK 122

Query: 105 TNAR 108
           T  R
Sbjct: 123 TTGR 126


>gi|126697458|gb|ABO26686.1| 40S ribosomal protein S18 [Haliotis discus discus]
          Length = 154

 Score = 42.0 bits (97), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI    +++ AL  I G+G + S  +  K  I   +R  +L + EV ++    
Sbjct: 14  ILRVMNTNIDGRTKIMFALTAIKGMGRRFSNVVLKKANIDLTKRAGELSDEEVDRVITVM 73

Query: 57  ---RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  TNPRQYKIPDWFLNRQKDVKDGKFNQVLANMLDNKLREDLERLKKIRNHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|321458683|gb|EFX69747.1| hypothetical protein DAPPUDRAFT_300691 [Daphnia pulex]
          Length = 152

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI    +++ A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRILNTNIDGKIKIMFAVTSIKGVGRRYANVVLKKADIDLTKRAGELSEEEVEKLITIM 71

Query: 57  ---RQAIEQDY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIKDGKFSQVTSNMLENKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|326434114|gb|EGD79684.1| 40S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
          Length = 154

 Score = 42.0 bits (97), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+   + ++ +L  I G+G + S     K  I  ++R  QL   +V +I + ++ 
Sbjct: 14  RVLNTNLAGEENIMYSLTAIRGVGRRYSNLCLKKAEINQKQRAGQLNNDDVDRIVKVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      V  DL   +  + +R+  +  +RG+RH  G+ VRG
Sbjct: 74  PLQYKIPKWFLNRQKDPKDGAYQHCVANDLNSKLRDDFERMKKMRLHRGIRHMWGVRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GVA+K+
Sbjct: 134 QHTKTTGRRGKTV---GVAKKK 152


>gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii]
          Length = 184

 Score = 42.0 bits (97), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++++ AL  I G+G + S  +C K  +   +R  ++   +V ++    
Sbjct: 44  ILRVMNTNIDGRRKIMFALTAIKGVGRRYSNVVCKKADVDLTKRAXKISAIQVEKLITIM 103

Query: 57  ---RQAIEQDYQV-------EGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A N+        +R+  +  +RGLRH  GL V
Sbjct: 104 SNPRQYKIPDWFLNRQKDVKDGKYSQVLANNLDNKLREDLERMKKIRAHRGLRHYWGLRV 163

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 164 RGQHTKTTGR 173


>gi|225710398|gb|ACO11045.1| 40S ribosomal protein S18 [Caligus rogercresseyi]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI   + ++ A+  I GIG + +  +  K  I   +R  +L E EV +I      
Sbjct: 14  RVMNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIMQN 73

Query: 57  -RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+ +       EG   + ++         +++RL  +  +RGLRH  G+ VRG
Sbjct: 74  PRQYKIPDWFLNRQKDIKEGKTSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGVRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|124486067|ref|YP_001030683.1| 30S ribosomal protein S13P [Methanocorpusculum labreanum Z]
 gi|158706246|sp|A2SSW0|RS13_METLZ RecName: Full=30S ribosomal protein S13P
 gi|124363608|gb|ABN07416.1| SSU ribosomal protein S13P [Methanocorpusculum labreanum Z]
          Length = 150

 Score = 41.6 bits (96), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 26/144 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   + V  AL  I GIG  ++  I  +  +     +  L + +V  I + +
Sbjct: 10  FVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQV 69

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  +    DL      +I  +  + CYRG+RH  GL VR
Sbjct: 70  KAYPASVPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVR 129

Query: 100 GQRTHTNARTRKKFGK-GGVARKR 122
           GQRT    R    FGK  GV+++R
Sbjct: 130 GQRTKATGR----FGKIVGVSKRR 149


>gi|62858571|ref|NP_001016358.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
 gi|161611793|gb|AAI55979.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
 gi|166796647|gb|AAI59393.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|168049335|ref|XP_001777119.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671562|gb|EDQ58112.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +      
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73

Query: 57  -RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+ +       +G   + V+         +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDHKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++KR
Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152


>gi|322699777|gb|EFY91536.1| 30S ribosomal protein S13 [Metarhizium acridum CQMa 102]
          Length = 119

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 36 KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
          K +I    +V  L    V  +   + Q   +E D RR V  NI+RL D+G YRG RH  G
Sbjct: 3  KYSIHKLAKVGSLSPRTVTSLTAELSQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMG 61

Query: 96 LP 97
          LP
Sbjct: 62 LP 63


>gi|89257933|gb|ABD65245.1| ribosomal protein S18 [Stenella coeruleoalba]
          Length = 141

 Score = 41.6 bits (96), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 1   ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 60

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 61  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 119

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 120 VRGQHTKTTGR 130


>gi|168004052|ref|XP_001754726.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694347|gb|EDQ80696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +      
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73

Query: 57  -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+                V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKVPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++KR
Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152


>gi|321263256|ref|XP_003196346.1| ribosomal protein S18 [Cryptococcus gattii WM276]
 gi|317462822|gb|ADV24559.1| ribosomal protein S18, putative [Cryptococcus gattii WM276]
          Length = 155

 Score = 41.6 bits (96), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G  +  ++         +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPSWFLNRQRDITDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 135 RGQHTKTTGR 144


>gi|309262972|ref|XP_003085935.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|148668546|gb|EDL00865.1| mCG114988 [Mus musculus]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|148700464|gb|EDL32411.1| mCG116671 [Mus musculus]
          Length = 152

 Score = 41.6 bits (96), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|213406555|ref|XP_002174049.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|213409073|ref|XP_002175307.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|212002096|gb|EEB07756.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|212003354|gb|EEB09014.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I G+G + +   C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKNKVMYALTQIKGVGRRYANIACKKADVDMSKRAGELTTEELERLVTIV 71

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G   + +A N+        +RL  +  +RGLRH   L V
Sbjct: 72  QNPTQFKIPAWFLNRQKDITDGKSYQLLANNVDSKLRDDLERLKKIQAHRGLRHALDLRV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  K  G
Sbjct: 132 RGQHTKTTGRRGKTVG 147


>gi|198578|gb|AAA16796.1| ribosomal protein [Mus musculus]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLHNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|6755368|ref|NP_035426.1| 40S ribosomal protein S18 [Mus musculus]
 gi|11968182|ref|NP_072045.1| 40S ribosomal protein S18 [Homo sapiens]
 gi|47087103|ref|NP_998722.1| 40S ribosomal protein S18 [Rattus norvegicus]
 gi|47522714|ref|NP_999105.1| 40S ribosomal protein S18 [Sus scrofa]
 gi|75812924|ref|NP_001028786.1| 40S ribosomal protein S18 [Bos taurus]
 gi|189339186|ref|NP_001041547.1| 40S ribosomal protein S18 [Canis lupus familiaris]
 gi|55626404|ref|XP_518400.1| PREDICTED: similar to ribosomal protein [Pan troglodytes]
 gi|114606875|ref|XP_001170296.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes]
 gi|149732112|ref|XP_001497114.1| PREDICTED: similar to ribosomal protein S18 [Equus caballus]
 gi|291396021|ref|XP_002714578.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
 gi|291408932|ref|XP_002720764.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
 gi|293340584|ref|XP_002724624.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|293351981|ref|XP_002727879.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|296197873|ref|XP_002746441.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus]
 gi|297661285|ref|XP_002809198.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
 gi|301757095|ref|XP_002914379.1| PREDICTED: 40S ribosomal protein S18-like [Ailuropoda melanoleuca]
 gi|50403620|sp|P62271|RS18_RAT RecName: Full=40S ribosomal protein S18
 gi|50403625|sp|P62269|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
           Short=Ke3
 gi|54039371|sp|P62272|RS18_PIG RecName: Full=40S ribosomal protein S18
 gi|54039385|sp|P62270|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
           Short=Ke3
 gi|62900940|sp|Q5TJE9|RS18_CANFA RecName: Full=40S ribosomal protein S18
 gi|91207636|sp|Q3T0R1|RS18_BOVIN RecName: Full=40S ribosomal protein S18
 gi|206558173|sp|A5JST6|RS18_CAPHI RecName: Full=40S ribosomal protein S18
 gi|187609266|pdb|2ZKQ|MM Chain m, Structure Of A Mammalian Ribosomal 40s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|198580|gb|AAA16795.1| ribosomal protein [Mus musculus]
 gi|433447|emb|CAA40750.1| ribosomal protein S18 [Rattus rattus]
 gi|1841304|dbj|BAA19211.1| ribosomal protein [Sus scrofa]
 gi|3811382|gb|AAC69898.1| ribosomal protein subunit S18 [Mus musculus]
 gi|3820980|emb|CAA20231.1| ribosomal protein S18 [Homo sapiens]
 gi|4050105|gb|AAC97978.1| RPS18 [Mus musculus]
 gi|6006558|emb|CAB56794.1| ribosomal protein S18 [Homo sapiens]
 gi|26341376|dbj|BAC34350.1| unnamed protein product [Mus musculus]
 gi|46237544|emb|CAE83925.1| ribosomal protein S18 [Rattus norvegicus]
 gi|51980402|gb|AAH81459.1| Ribosomal protein S18 [Mus musculus]
 gi|51980469|gb|AAH81458.1| Ribosomal protein S18 [Mus musculus]
 gi|55956952|emb|CAI11439.1| ribosomal protein S18 [Canis lupus familiaris]
 gi|55961242|emb|CAI17530.1| ribosomal protein S18 [Homo sapiens]
 gi|55961291|emb|CAI18076.1| ribosomal protein S18 [Homo sapiens]
 gi|55961522|emb|CAI18127.1| ribosomal protein S18 [Homo sapiens]
 gi|55961771|emb|CAI17656.1| ribosomal protein S18 [Homo sapiens]
 gi|57209749|emb|CAI41848.1| ribosomal protein S18 [Homo sapiens]
 gi|62533209|gb|AAH93500.1| Ribosomal protein S18 [Mus musculus]
 gi|72679475|gb|AAI00605.1| Ribosomal protein S18 [Mus musculus]
 gi|74141885|dbj|BAE41010.1| unnamed protein product [Mus musculus]
 gi|74195924|dbj|BAE30520.1| unnamed protein product [Mus musculus]
 gi|74226926|dbj|BAE27106.1| unnamed protein product [Mus musculus]
 gi|74268023|gb|AAI02294.1| Ribosomal protein S18 [Bos taurus]
 gi|75517276|gb|AAI01787.1| Ribosomal protein S18 [Homo sapiens]
 gi|75517910|gb|AAI01789.1| Ribosomal protein S18 [Homo sapiens]
 gi|76779249|gb|AAI06064.1| Ribosomal protein S18 [Homo sapiens]
 gi|117558483|gb|AAI26073.1| Ribosomal protein S18 [Rattus norvegicus]
 gi|119624100|gb|EAX03695.1| ribosomal protein S18, isoform CRA_b [Homo sapiens]
 gi|147744669|gb|ABQ51201.1| ribosomal protein S18 [Capra hircus]
 gi|148678285|gb|EDL10232.1| mCG23000, isoform CRA_b [Mus musculus]
 gi|149043391|gb|EDL96842.1| rCG60872, isoform CRA_a [Rattus norvegicus]
 gi|168985411|emb|CAQ08021.1| ribosomal protein S18 [Homo sapiens]
 gi|168985731|emb|CAQ08251.1| ribosomal protein S18 [Homo sapiens]
 gi|197127178|gb|ACH43676.1| putative ribosomal protein S18 [Taeniopygia guttata]
 gi|296474555|gb|DAA16670.1| 40S ribosomal protein S18 [Bos taurus]
 gi|307685871|dbj|BAJ20866.1| ribosomal protein S18 [synthetic construct]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|58259960|ref|XP_567390.1| ribosomal protein S18 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116184|ref|XP_773263.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255885|gb|EAL18616.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229440|gb|AAW45873.1| ribosomal protein S18, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 155

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 61  EQDYQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q               +G  +  ++         +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPSWFLNRQRDISDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 135 RGQHTKTTGR 144


>gi|121512018|gb|ABM55460.1| ribosomal protein S18 [Xenopsylla cheopis]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           RI   NI   ++V+ A+  I G+G + +  +  K  +   +R  +  E EV +I      
Sbjct: 14  RIMSTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIMST 73

Query: 57  -RQAIEQDYQV---------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+ +                  L   +  +++R+  +  +RG+RH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRQKDIVDGRYSQLTSSSLDSKLREDLERMKKIKAHRGMRHYWGLRVRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|281338468|gb|EFB14052.1| hypothetical protein PANDA_002275 [Ailuropoda melanoleuca]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|318190651|ref|NP_001187081.1| 40S ribosomal protein S18 [Ictalurus punctatus]
 gi|41018101|sp|Q90YQ5|RS18_ICTPU RecName: Full=40S ribosomal protein S18
 gi|15294049|gb|AAK95201.1|AF402827_1 40S ribosomal protein S18 [Ictalurus punctatus]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|225734652|gb|ACO25361.1| 40S ribosomal protein S18 [Gillichthys seta]
 gi|226442023|gb|ACO57601.1| 40S ribosomal protein S18 [Gillichthys mirabilis]
          Length = 142

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 6   ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 65

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 66  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 126 RGQHTKTTGR 135


>gi|91083227|ref|XP_973632.1| PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum]
 gi|270007711|gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  + EV +I    
Sbjct: 12  ILRILNTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSDEEVEKIVTIM 71

Query: 57  ---RQAIEQDYQ-------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+        V+G   +  +         +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|302829312|ref|XP_002946223.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
 gi|300269038|gb|EFJ53218.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
          Length = 153

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+    +++ A+  I GIG + S  +C K  +   +R  +    E+ ++   +  
Sbjct: 15  RLLNTNVDGKNKIMYAMTAIKGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVAN 74

Query: 61  -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++D++           L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 75  PRAYKIPDWFLNRQKDHKTGRYSQLTSSGLDTALRDDLERLKKIRNHRGLRHYWGLRVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GVA+K+
Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153


>gi|28626512|ref|NP_775341.1| 40S ribosomal protein S18 [Danio rerio]
 gi|41018061|sp|Q8JGS9|RS18_DANRE RecName: Full=40S ribosomal protein S18
 gi|20977555|gb|AAM28205.1| 40S ribosomal protein S18 [Danio rerio]
 gi|38566120|gb|AAH62289.1| Ribosomal protein S18 [Danio rerio]
 gi|126632524|emb|CAM56557.1| ribosomal protein S18 [Danio rerio]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|74197062|dbj|BAE35083.1| unnamed protein product [Mus musculus]
 gi|74204663|dbj|BAE35401.1| unnamed protein product [Mus musculus]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIRGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|168024894|ref|XP_001764970.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683779|gb|EDQ70186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +      
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73

Query: 57  -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+                V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++KR
Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152


>gi|168004046|ref|XP_001754723.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168049271|ref|XP_001777087.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168052464|ref|XP_001778670.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669988|gb|EDQ56565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671530|gb|EDQ58080.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694344|gb|EDQ80693.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +      
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIVAN 73

Query: 57  -RQAIEQDY---------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+                V   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++KR
Sbjct: 134 QHTKTTGRRGRTV---GVSKKR 152


>gi|60417186|emb|CAH57704.1| 40S ribosomal protein S18 [Platichthys flesus]
 gi|116488056|gb|ABJ98610.1| 40S ribosomal protein S18 [Scophthalmus maximus]
 gi|124300823|dbj|BAF45907.1| ribosomal protein S18 [Solea senegalensis]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|303289004|ref|XP_003063790.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
 gi|226454858|gb|EEH52163.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
          Length = 144

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I GIG + +  +C K  I   +R  +L  +E+  +   +
Sbjct: 13  ILRVLNTNVDGRTKVMYALTQIRGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIV 72

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+           L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 73  ANPRQFRIPDWFLNRQKDYKDGKYVQLTSNALDTKLRDDLERLKKIRNHRGLRHYWGIRV 132

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 133 RGQHTKTTGR 142


>gi|71005082|ref|XP_757207.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
 gi|46096569|gb|EAK81802.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
          Length = 154

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V  AL  I G+G + +  +C K  I   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLSKRAGELNSDELERIVTIL 74

Query: 61  EQDYQ--------------VEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
           +   +              V+G   + ++ NI        +RL  +  +RG+RH  GL V
Sbjct: 75  QNPAEFKIPSWFLNRQRDIVDGKSSQLLSNNIDSKLRDDLERLKKIKAHRGIRHYLGLRV 134

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 135 RGQHTKTTGR 144


>gi|327289179|ref|XP_003229302.1| PREDICTED: 40S ribosomal protein S18-like [Anolis carolinensis]
          Length = 197

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 57  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 116

Query: 58  QAIEQ----DYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 117 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 176

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 177 RGQHTKTTGR 186


>gi|312380810|gb|EFR26705.1| hypothetical protein AND_25954 [Anopheles darlingi]
          Length = 146

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   +
Sbjct: 6   ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIV 65

Query: 61  E--------------QDYQVEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
                          Q   V+G   +  + NI        +RL  +  +RG+RH  GL V
Sbjct: 66  SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHHWGLRV 125

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 126 RGQHTKTTGR 135


>gi|110671476|gb|ABG81989.1| putative ribosomal protein S18 [Diaphorina citri]
          Length = 153

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 31/135 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++V+ AL  I G G + S  +  K  I   +R  +  E EV +I    
Sbjct: 12  ILRVMSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM 71

Query: 57  ---RQAIEQDY--------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
              RQ    D+                    Q++  LR     +++RL  +  +RG+RH 
Sbjct: 72  TNPRQYKIPDWFLNRQKDIVDGKYSQLTSTAQLDSKLRE----DLERLKKIRAHRGMRHY 127

Query: 94  RGLPVRGQRTHTNAR 108
            GL VRGQ T T  R
Sbjct: 128 WGLRVRGQHTKTTGR 142


>gi|158289973|ref|XP_311570.4| AGAP010375-PA [Anopheles gambiae str. PEST]
 gi|157018416|gb|EAA07206.5| AGAP010375-PA [Anopheles gambiae str. PEST]
          Length = 152

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITII 71

Query: 61  E--------------QDYQVEGDLRRTVAMNI--------KRLMDLGCYRGLRHRRGLPV 98
                          Q   V+G   +  + NI        +RL  +  +RG+RH  GL V
Sbjct: 72  SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|47570246|ref|ZP_00240897.1| 30S ribosomal protein s13 [Bacillus cereus G9241]
 gi|47553070|gb|EAL11470.1| 30S ribosomal protein s13 [Bacillus cereus G9241]
          Length = 30

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 22/26 (84%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIG 26
          MARIAGV+IPR KRVV +L Y+ GIG
Sbjct: 1  MARIAGVDIPRDKRVVISLTYVFGIG 26


>gi|159476746|ref|XP_001696472.1| ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Chlamydomonas reinhardtii]
 gi|158282697|gb|EDP08449.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
          Length = 153

 Score = 41.2 bits (95), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+    +++ A+  I GIG + S  +C K  +   +R  +    E+ ++   +  
Sbjct: 15  RLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIVAN 74

Query: 61  -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++D++           L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 75  PRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GVA+K+
Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153


>gi|293347481|ref|XP_002726601.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQ----DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|293359376|ref|XP_002729551.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score = 40.8 bits (94), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQ----DY--------------QVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+              QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|297737051|emb|CBI26252.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 25/127 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---------------EQ 62
           AL  I GIG + +  +C K  +   +R  +L  +E+  +   +               ++
Sbjct: 3   ALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKK 62

Query: 63  DYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           DY+       V   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K    
Sbjct: 63  DYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV-- 120

Query: 116 GGVARKR 122
            GV++KR
Sbjct: 121 -GVSKKR 126


>gi|167527167|ref|XP_001747916.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773665|gb|EDQ87303.1| predicted protein [Monosiga brevicollis MX1]
          Length = 154

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 26/141 (18%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59
           R+   NI   + ++ A+  I G+G + S     K  I   RR  +L E +V   + I Q 
Sbjct: 14  RVMNTNIAGDRNIMYAMTAIKGVGRRYSNLCLKKAEISTRRRAGELTEDDVRRVVTIMQN 73

Query: 60  IEQ----DYQVE---------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q    D+ +                 DL   +  +++R+  +  +RG+RH  G+ VRG
Sbjct: 74  PRQYKIPDWFLNRKKDIKDGTYSQLLASDLNVKLRDDLERMKKIRLHRGIRHYWGVRVRG 133

Query: 101 QRTHTNARTRKKFG----KGG 117
           Q T T  R  +  G    KGG
Sbjct: 134 QHTKTTGRRGRTVGVSKKKGG 154


>gi|114606877|ref|XP_001170149.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes]
          Length = 143

 Score = 40.8 bits (94), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 17/123 (13%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E E    RQ  
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDE--NPRQYK 69

Query: 61  EQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
             D+ +       +G   + +A         +++RL  +  +RGLRH  GL VRGQ T T
Sbjct: 70  IPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKT 129

Query: 106 NAR 108
             R
Sbjct: 130 TGR 132


>gi|328852742|gb|EGG01885.1| hypothetical protein MELLADRAFT_91715 [Melampsora larici-populina
           98AG31]
          Length = 156

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +   C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 74

Query: 61  E---------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     + +QV  + L   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPNWFLNRQRDIVDGKSFQVLSNGLDSKMREDLERLKKIRAHRGLRHYWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|290985905|ref|XP_002675665.1| ribosomal protein S13 [Naegleria gruberi]
 gi|284089263|gb|EFC42921.1| ribosomal protein S13 [Naegleria gruberi]
          Length = 156

 Score = 40.8 bits (94), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +  + AL  + GIG + +  +  K  I   +R  +L E ++ +I+  I
Sbjct: 14  LLRLFNTNIEGRRSALYALTSVKGIGRRFAGIVLKKAEIELTKRSGELSEEQINKIQDII 73

Query: 61  --EQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              + Y++             G     VA         +++RL  +   RGLRH  GL V
Sbjct: 74  LAPEKYKIPSWFLNRRRDWKSGATEHLVANAVDMYLREDLERLKKIKSERGLRHMWGLRV 133

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  K  G
Sbjct: 134 RGQHTKTTGRRGKTVG 149


>gi|225714468|gb|ACO13080.1| 40S ribosomal protein S18 [Lepeophtheirus salmonis]
          Length = 152

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   + ++ A+  I GIG + +  +  K  I   +R  +L E EV +I    
Sbjct: 12  ILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       EG   + ++         +++RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|70992765|ref|XP_751231.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
 gi|66848864|gb|EAL89193.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
 gi|159130314|gb|EDP55427.1| ribosomal protein S13p/S18e [Aspergillus fumigatus A1163]
          Length = 127

 Score = 40.4 bits (93), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 22/113 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE---------------- 61
           AL  I G+G + S  +C K  +   +R  +L   E+ +I   ++                
Sbjct: 3   ALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPTQYKIPTWFLNRQR 62

Query: 62  -----QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                +D QV  + L   +  +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 63  DIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR 115


>gi|27658598|ref|XP_226269.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQA 59
           R+   N+   +++  A+  I G+G++ +  +  K  I   +R  +L E EV   I I Q 
Sbjct: 14  RVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQN 73

Query: 60  IEQDYQVEGDLRRTVAM-------------------NIKRLMDLGCYRGLRHRRGLPVRG 100
             Q    +  L R   M                   +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDMKDGKYSQVLANSLDNKLREDLERVKKIRAHRGLRHFWGLRVRG 133

Query: 101 QRTHTNAR 108
           + T T  R
Sbjct: 134 RHTKTTGR 141


>gi|331219824|ref|XP_003322588.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301578|gb|EFP78169.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 215

 Score = 40.4 bits (93), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   N+    +++ AL  I G+G + +   C K  +   +R  +L   E+ +I   I+ 
Sbjct: 77  RLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTIIQN 136

Query: 62  --------------------QDYQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               + YQV  + L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 137 PAQFKIPAWFLNRQRDIVDGKSYQVLSNGLDSKLREDLERLKKIRAHRGLRHYWGLRVRG 196

Query: 101 QRTHTNARTRKKFG 114
           Q T T  R  K  G
Sbjct: 197 QHTKTTGRRGKTVG 210


>gi|75764943|ref|ZP_00744281.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|74487567|gb|EAO51445.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
          Length = 30

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 19/26 (73%), Positives = 22/26 (84%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIG 26
          MARIAGV+IPR KRVV +L Y+ GIG
Sbjct: 1  MARIAGVDIPRDKRVVISLTYVFGIG 26


>gi|109097924|ref|XP_001085646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca
           mulatta]
 gi|297263054|ref|XP_002798738.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
 gi|297263056|ref|XP_002798739.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
          Length = 152

 Score = 40.4 bits (93), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIYGQRKIAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
           +  +Q               +G   + +A         +++RL  +  +RGL H  GL V
Sbjct: 72  QNPHQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|313126020|ref|YP_004036290.1| SSU ribosomal protein s13p [Halogeometricum borinquense DSM 11551]
 gi|312292385|gb|ADQ66845.1| SSU ribosomal protein S13P [Halogeometricum borinquense DSM 11551]
          Length = 172

 Score = 40.4 bits (93), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E  ++   DL +    +I R+  +  Y+G+RH+RG  VRGQRT +  RT    G
Sbjct: 101 ETTHKTGSDLEQKRRHDINRMKMINSYKGVRHKRGQKVRGQRTKSTGRTEGTIG 154


>gi|225703456|gb|ACO07574.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score = 40.0 bits (92), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152


>gi|256084884|ref|XP_002578655.1| 40S ribosomal protein S18 [Schistosoma mansoni]
 gi|238664036|emb|CAZ34893.1| 40S ribosomal protein S18, putative [Schistosoma mansoni]
          Length = 152

 Score = 40.0 bits (92), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 22/123 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTEDEVEKLVTVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      + G L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDVDDGKHSQLMSGALETKLREDLERLKRIRSHRGIRHYWGLRV 131

Query: 99  RGQ 101
           RGQ
Sbjct: 132 RGQ 134


>gi|302782790|ref|XP_002973168.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
 gi|300158921|gb|EFJ25542.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
          Length = 156

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 31/147 (21%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 14  RVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIVAN 73

Query: 61  -------------EQDYQVEGDLRRTVA--MNIKRLMDL----------GCYRGLRHRRG 95
                        ++DY+ +G   + VA  +++K   DL            +RGLRH  G
Sbjct: 74  PRQFKIPDWFLNRKKDYK-DGRYSQVVANALDMKLRDDLERLKKIRQAYSDHRGLRHYWG 132

Query: 96  LPVRGQRTHTNARTRKKFGKGGVARKR 122
           L VRGQ T T  R  +     GV++KR
Sbjct: 133 LRVRGQHTKTTERRGRTV---GVSKKR 156


>gi|148362150|gb|ABQ59673.1| ribosomal protein S18 [Salmo salar]
 gi|197631783|gb|ACH70615.1| ribosomal protein S18 [Salmo salar]
 gi|209732176|gb|ACI66957.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209733230|gb|ACI67484.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209736928|gb|ACI69333.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209738224|gb|ACI69981.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223646140|gb|ACN09828.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223646324|gb|ACN09920.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223671987|gb|ACN12175.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223672171|gb|ACN12267.1| 40S ribosomal protein S18 [Salmo salar]
 gi|225703166|gb|ACO07429.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225703728|gb|ACO07710.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225705884|gb|ACO08788.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225716168|gb|ACO13930.1| 40S ribosomal protein S18 [Esox lucius]
 gi|260182164|gb|ACX35593.1| ribosomal protein S18 [Salmo salar]
 gi|260182178|gb|ACX35606.1| ribosomal protein S18 [Salmo salar]
 gi|307147577|gb|ADN37677.1| ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score = 40.0 bits (92), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|229367816|gb|ACQ58888.1| 40S ribosomal protein S18 [Anoplopoma fimbria]
          Length = 152

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|209738282|gb|ACI70010.1| 40S ribosomal protein S18 [Salmo salar]
          Length = 152

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV   + I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVEGVVTIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|123492382|ref|XP_001326044.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|121908953|gb|EAY13821.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
          Length = 155

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV--ESEVI---- 54
           M R+   N+   + +  AL  I GIG + +  +  +  + P RR   L   E E+I    
Sbjct: 14  MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73

Query: 55  ------QI----------RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                 QI          R   +  + V  DL   +   I+R+  +   RG+RH  GL V
Sbjct: 74  QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T +  R   + G  GV RK+
Sbjct: 134 RGQCTKSTGR---RGGALGVERKK 154


>gi|61654738|gb|AAX48895.1| S18 [Suberites domuncula]
          Length = 152

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 30/134 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   NI   ++++  L  I G+G + +  +  K  +   +R  +L E E   VI I 
Sbjct: 12  ILRVLNTNIDGHQKIMFGLTAIKGVGRRYANLVLKKADVDMNKRAGELSEEEIERVITIM 71

Query: 58  QAIEQ----DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
           Q   Q    D+                   Q+E  LR     +++RL  +  +RGLRH  
Sbjct: 72  QNPRQYKIPDWFLNRQKDHRDGKYSQILANQLEHKLRE----DLERLKKIRAHRGLRHYW 127

Query: 95  GLPVRGQRTHTNAR 108
           G+ VRGQ T T  R
Sbjct: 128 GVRVRGQHTKTTGR 141


>gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata]
          Length = 154

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +  K  +   +R  +L + EV  +   I
Sbjct: 12  ILRVMNTNIDGRIKIMYALTAIKGVGRRYANLVLKKADVDLRKRAGELTDEEVEAVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  NNPKQYKIPNWFLNRQKDIKDGKYMQVTSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|328767380|gb|EGF77430.1| hypothetical protein BATDEDRAFT_91663 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 165

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE---VIQIR 57
           + R+   NI   ++++ AL  I GIG + +  +  K  I   +R  ++   E   V+ I 
Sbjct: 24  IIRLLNTNIDGKRKIMYALTSIKGIGRRYANLVLKKADIDLNKRAGEVTNDELERVVTIM 83

Query: 58  QAIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  G+ 
Sbjct: 84  QNPRQ-YKIPDWFLNRQKDIKDGKYTQVIANALDNKLREDLERLKKIRAHRGLRHYWGVR 142

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 143 VRGQHTKTTGR 153


>gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea]
          Length = 152

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI------ 56
           R+   NI     ++ A+  I GIG + +  +  K  I   +R  +L E EV Q+      
Sbjct: 14  RVFNTNIDGNICILHAMTAIKGIGRRYAHAVLRKADIDIRKRAGELAEEEVQQVVTIMSN 73

Query: 57  -RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRG 100
            RQ    D+ +       +G   + +A         +++R+  +  +RGLRH  GL  RG
Sbjct: 74  PRQYKIPDWYLNRQRDIKDGKTSQVIANGLDNKMREDMERMKKIRLHRGLRHYWGLRTRG 133

Query: 101 QRTHTNAR 108
           Q T T  R
Sbjct: 134 QHTKTTGR 141


>gi|508718|gb|AAC36889.1| homolog [Chlamydia trachomatis]
          Length = 46

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR 44
          M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R
Sbjct: 1  MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEAR 44


>gi|148679456|gb|EDL11403.1| mCG9349 [Mus musculus]
          Length = 143

 Score = 39.7 bits (91), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTQDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|225704576|gb|ACO08134.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++    
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKRIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|149264635|ref|XP_001473856.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 152

 Score = 39.3 bits (90), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGL H  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|114588265|ref|XP_001147895.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes]
 gi|114588267|ref|XP_001147958.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes]
 gi|114588269|ref|XP_001148030.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes]
 gi|114588271|ref|XP_001148104.1| PREDICTED: similar to ribosomal protein isoform 4 [Pan troglodytes]
 gi|114588273|ref|XP_001148176.1| PREDICTED: similar to ribosomal protein isoform 5 [Pan troglodytes]
          Length = 152

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K      +R  +L + EV   I I 
Sbjct: 12  ILRVLNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHLWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|146304895|ref|YP_001192211.1| 30S ribosomal protein S13P [Metallosphaera sedula DSM 5348]
 gi|145703145|gb|ABP96287.1| SSU ribosomal protein S13P [Metallosphaera sedula DSM 5348]
          Length = 165

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+ G ++    +    L  + GIG+ +++ I  KL I  ++R+ +L + E+ +I    
Sbjct: 9   IVRLFGQDVDGTMKAPYGLAMVKGIGYNTARVILMKLNIDKDKRLGELTDHELKKIEEML 68

Query: 57  ---------------RQAIE--QD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          R+ IE  QD + V  DL   V  +I+R   L  +RG+RH  GL V
Sbjct: 69  ANKKIESLPAWIFNRRKDIESGQDLHYVTSDLVFVVRNDIEREKKLKSWRGVRHSLGLKV 128

Query: 99  RG 100
           RG
Sbjct: 129 RG 130


>gi|327239254|gb|AEA39494.1| ribosomal protein S18 [Ailuropoda melanoleuca]
 gi|327239350|gb|AEA39542.1| ribosomal protein S18 [Ailuropoda melanoleuca]
          Length = 152

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLG 130

Query: 98  VRGQRTHTNAR 108
            RGQ T T  R
Sbjct: 131 ERGQHTKTTGR 141


>gi|330834006|ref|YP_004408734.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
 gi|329566145|gb|AEB94250.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
          Length = 163

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    +V   L  I GIG+ +++ I  KL I  +RR+ +L + E+ +I + +
Sbjct: 9   IVRLFGQDVDGTMKVPYGLAMIKGIGYNTARVILMKLNIDKDRRLGELNDHELKKIEEFL 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 69  SNKRLETLPSWMYNRRKDLETGLDMHYVTSDLVFVVRNDIEREKKIKSWRGIRHSLGLKV 128

Query: 99  RG 100
           RG
Sbjct: 129 RG 130


>gi|297670462|ref|XP_002813387.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
          Length = 152

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L   EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71

Query: 58  QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+ +       +G   + +A         +++RL  +  +RGLRH  G  V
Sbjct: 72  QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131

Query: 99  RGQRTHTNAR 108
           RGQRT T  R
Sbjct: 132 RGQRTKTTGR 141


>gi|227831062|ref|YP_002832842.1| 30S ribosomal protein S13P [Sulfolobus islandicus L.S.2.15]
 gi|227457510|gb|ACP36197.1| ribosomal protein S13 [Sulfolobus islandicus L.S.2.15]
          Length = 166

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   I
Sbjct: 8   VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVI 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R      +RG+RH  GL V
Sbjct: 68  SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127

Query: 99  RG 100
           RG
Sbjct: 128 RG 129


>gi|229579943|ref|YP_002838342.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.G.57.14]
 gi|229581396|ref|YP_002839795.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.N.15.51]
 gi|229585534|ref|YP_002844036.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.27]
 gi|238620496|ref|YP_002915322.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.4]
 gi|284998558|ref|YP_003420326.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
 gi|228010658|gb|ACP46420.1| ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14]
 gi|228012112|gb|ACP47873.1| ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51]
 gi|228020584|gb|ACP55991.1| ribosomal protein S13 [Sulfolobus islandicus M.16.27]
 gi|238381566|gb|ACR42654.1| ribosomal protein S13 [Sulfolobus islandicus M.16.4]
 gi|284446454|gb|ADB87956.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
 gi|323475374|gb|ADX85980.1| ribosomal protein S13 [Sulfolobus islandicus REY15A]
 gi|323478099|gb|ADX83337.1| ribosomal protein S13 [Sulfolobus islandicus HVE10/4]
          Length = 166

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   I
Sbjct: 8   VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVI 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R      +RG+RH  GL V
Sbjct: 68  SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127

Query: 99  RG 100
           RG
Sbjct: 128 RG 129


>gi|125546023|gb|EAY92162.1| hypothetical protein OsI_13875 [Oryza sativa Indica Group]
 gi|125588230|gb|EAZ28894.1| hypothetical protein OsJ_12934 [Oryza sativa Japonica Group]
          Length = 170

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 43/160 (26%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI----------PPERR-------- 44
           R+   N+   ++++ AL  I G+G + S   C K  I          PP RR        
Sbjct: 14  RLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPPPPSRRQISVMVGG 73

Query: 45  VHQLVESEVIQIRQAI---------------EQDYQ-------VEGDLRRTVAMNIKRLM 82
             +L   E+ ++   +               ++DY+       V   L   +  +++RL 
Sbjct: 74  AGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLK 133

Query: 83  DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +  +RGLRH  GL VRGQ T T  R  K     GV++KR
Sbjct: 134 KIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 170


>gi|123367594|ref|XP_001297089.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123448087|ref|XP_001312777.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123453508|ref|XP_001314734.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123475112|ref|XP_001320735.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123479230|ref|XP_001322774.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123482954|ref|XP_001323914.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123503102|ref|XP_001328438.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|121877055|gb|EAX84159.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121894636|gb|EAX99847.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121897372|gb|EAY02495.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121903547|gb|EAY08512.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121905626|gb|EAY10551.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121906788|gb|EAY11691.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121911381|gb|EAY16215.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
          Length = 155

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV--ESEVI---- 54
           M R+   N+   + +  AL  I GIG + +  +  +  + P RR   L   E E+I    
Sbjct: 14  MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73

Query: 55  ------QI----------RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                 QI          R   +  + V  DL   +   I+R+  +   RG+RH  GL V
Sbjct: 74  QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLGANIRAEIERMKKMRMKRGIRHGLGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T +  R   + G  GV RK+
Sbjct: 134 RGQCTKSTGR---RGGALGVERKK 154


>gi|299830268|ref|YP_003734432.1| ribosomal protein S13 [Paramecium caudatum]
 gi|299507827|emb|CAZ66811.1| ribosomal protein S13 [Paramecium caudatum]
          Length = 244

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 16/29 (55%), Positives = 20/29 (68%)

Query: 84  LGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           L  Y+G RH +GLP RGQRT +NA +  K
Sbjct: 90  LWNYKGWRHFKGLPCRGQRTWSNAWSSYK 118


>gi|109073773|ref|XP_001099137.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
 gi|109073775|ref|XP_001099240.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
 gi|297292315|ref|XP_002804060.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
 gi|297292317|ref|XP_002804061.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
          Length = 152

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 24/137 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRQKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNARTRKKFG 114
           VRGQ   T  R  +  G
Sbjct: 131 VRGQHAKTTGRCGRTVG 147


>gi|119600195|gb|EAW79789.1| hCG1777176, isoform CRA_b [Homo sapiens]
          Length = 152

 Score = 38.9 bits (89), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K      +R  +L + EV   I I 
Sbjct: 12  ILRVLNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407]
          Length = 156

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++VV AL  + G G + +  +  K  I    R  +L   ++ +I   +
Sbjct: 14  IIRLLNTNIDGKQKVVYALTKVKGCGRRYANIVAKKADIDLNLRAGELTAEQLERIVSIL 73

Query: 61  EQDYQ--------------VEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   + +A         +++RL  +  +RGLRH  GL V
Sbjct: 74  QSPTQYKIPSWFLNRQRDIVDGKDSQILANGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 134 RGQHTKTTGR 143


>gi|1350947|sp|P49202|RS18_CHLRE RecName: Full=40S ribosomal protein S18
 gi|624957|emb|CAA58668.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
 gi|1587084|prf||2205351A ribosomal protein S18
          Length = 153

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   N+    +++ A+  I GIG + S  +C K  +   +   +    E+ ++   +  
Sbjct: 15  RLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIVAN 74

Query: 61  -------------EQDYQV-------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                        ++D++           L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 75  PRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GVA+K+
Sbjct: 135 QHTKTTGRAGKTV---GVAKKK 153


>gi|67478589|ref|XP_654681.1| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|167379766|ref|XP_001735274.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|56471746|gb|EAL49291.1| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|165902807|gb|EDR28533.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
          Length = 143

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I   +
Sbjct: 1   MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 60

Query: 61  EQ--DYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
               +Y++            +G   + +A         +I+ L  +  +RGLRH  GL V
Sbjct: 61  NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 120

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 121 RGQHTKTTGRRGRTVG 136


>gi|212531371|ref|XP_002145842.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
 gi|210071206|gb|EEA25295.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
          Length = 127

 Score = 38.5 bits (88), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 22/113 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------------ 65
           AL  I G+G + S  +C K  +   +R   +   E+ +I   I+   Q            
Sbjct: 3   ALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPTQYKIPAWFLNRQR 62

Query: 66  ----------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                     +   +   +  +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 63  DITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGR 115


>gi|167378734|ref|XP_001734909.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|167381370|ref|XP_001735684.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|183231655|ref|XP_654098.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|183233172|ref|XP_653090.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|165902209|gb|EDR28096.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
 gi|165903334|gb|EDR28910.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
 gi|169801707|gb|EAL47704.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|169802392|gb|EAL48712.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 155

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I   +
Sbjct: 13  MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72

Query: 61  EQ--DYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
               +Y++            +G   + +A         +I+ L  +  +RGLRH  GL V
Sbjct: 73  NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 133 RGQHTKTTGR 142


>gi|269862378|ref|XP_002650814.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|269862740|ref|XP_002650957.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|269864585|ref|XP_002651624.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220064177|gb|EED42431.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220065356|gb|EED43099.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220065576|gb|EED43243.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
          Length = 161

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 30/133 (22%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   K++V AL  I G+G + ++    +  + P +   +L   E+  I+  I++
Sbjct: 23  RLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVIDE 82

Query: 63  -------DY-------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGL 96
                  +Y                   +++GDLR    M I++       RG R   GL
Sbjct: 83  PLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLR----MLIEKAKKFKEIRGCRLAMGL 138

Query: 97  PVRGQRTHTNART 109
              GQRT +N R 
Sbjct: 139 KCNGQRTRSNGRN 151


>gi|1350948|sp|P48151|RS18_ENTHI RecName: Full=40S ribosomal protein S18
 gi|509603|gb|AAD09140.1| ribosomal protein S18 [Entamoeba histolytica]
          Length = 155

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 30/134 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I    
Sbjct: 13  MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72

Query: 57  --------------RQAIEQDYQ--------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
                         RQ   +D +        VE  LR     +I+ L  +  +RGLRH  
Sbjct: 73  TTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLRE----DIEALKKMRAHRGLRHYW 128

Query: 95  GLPVRGQRTHTNAR 108
           GL VRGQ T T  R
Sbjct: 129 GLRVRGQNTKTTGR 142


>gi|227828304|ref|YP_002830084.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.14.25]
 gi|227460100|gb|ACP38786.1| ribosomal protein S13 [Sulfolobus islandicus M.14.25]
          Length = 166

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   +
Sbjct: 8   VVRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVL 67

Query: 61  E---------------QDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+       V  DL   V  +I+R      +RG+RH  GL V
Sbjct: 68  SDHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKV 127

Query: 99  RG 100
           RG
Sbjct: 128 RG 129


>gi|116754907|ref|YP_844025.1| 30S ribosomal protein S13P [Methanosaeta thermophila PT]
 gi|121694236|sp|A0B9L1|RS13_METTP RecName: Full=30S ribosomal protein S13P
 gi|116666358|gb|ABK15385.1| SSU ribosomal protein S13P [Methanosaeta thermophila PT]
          Length = 159

 Score = 38.1 bits (87), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I G+G + ++    K  + P   + +L E ++  ++  I
Sbjct: 15  IVRIYNTDLDGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVI 74

Query: 61  EQ--------------------DYQVEG-DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                     D  V G ++  T+  ++  +     Y+G+RH  GL VR
Sbjct: 75  ESVRDNIPAWMMNRRKDIITGVDKHVMGAEVLTTLREDLDIMKKTRSYKGIRHELGLRVR 134

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R+       GV RK+
Sbjct: 135 GQRTRSTGRSGATV---GVTRKK 154


>gi|37779106|gb|AAP20213.1| 40S ribosomal protein S18 [Pagrus major]
          Length = 140

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 22/124 (17%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQA 59
            NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++       RQ 
Sbjct: 6   TNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPRQY 65

Query: 60  IEQDYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
              D+ +       +G   + +A         +++RL  +  +RGLRH  GL VRGQ T 
Sbjct: 66  KIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTK 125

Query: 105 TNAR 108
           T  R
Sbjct: 126 TTGR 129


>gi|141013|sp|P15609|YM08_PARTE RecName: Full=Uncharacterized mitochondrial protein ORF8
 gi|578757|emb|CAA34049.1| unnamed protein product [Paramecium aurelia]
          Length = 241

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           A NI     +  YR  RH +GLP RGQRT +NA +
Sbjct: 78  AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASS 112


>gi|8928596|ref|NP_059401.1| ribosomal protein S13 [Paramecium aurelia]
          Length = 244

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 21/35 (60%)

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           A NI     +  YR  RH +GLP RGQRT +NA +
Sbjct: 81  AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNASS 115


>gi|300120359|emb|CBK19913.2| unnamed protein product [Blastocystis hominis]
 gi|300175444|emb|CBK20755.2| unnamed protein product [Blastocystis hominis]
 gi|300175526|emb|CBK20837.2| unnamed protein product [Blastocystis hominis]
          Length = 111

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE--------------GDLRRTVAMNI 78
           +C K  I   RR  +L   E+ ++   I    Q +              G  R+ V+ N+
Sbjct: 3   VCKKAEIDISRRAGELSNDEIEKLIAVISTPLQFDIPEWFLNRQKDVETGKYRQVVSNNL 62

Query: 79  K--------RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVARKR 122
           +        RL  +   RGLRH   L VRGQ T T  R    FGK  GV+ K+
Sbjct: 63  QANLREDLNRLKKMRANRGLRHYWNLKVRGQHTKTTGR----FGKSVGVSTKK 111


>gi|109083515|ref|XP_001098938.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
          Length = 152

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 24/137 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI    ++  A+  I G+G + +  +  K      +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 72  QNPRQ-YKIPDRFLNRQKDVKDGKYSQALANGLDNNLRKDLERLKKIQAHRGLRHFWGLC 130

Query: 98  VRGQRTHTNARTRKKFG 114
           V+GQ T T  R  +  G
Sbjct: 131 VQGQHTKTTGRRGRTMG 147


>gi|263173239|gb|ACY69887.1| S18e ribosomal protein [Cimex lectularius]
          Length = 131

 Score = 37.4 bits (85), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 22/118 (18%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------- 65
           ++V+ A+  I G+G + +  +  K  +  ++R  +  E EV +I   ++   Q       
Sbjct: 3   RKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKILTIMQNPRQYKIPDWF 62

Query: 66  -------VEG--------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                  VEG         L   +  +++RL  +  +RG+RH  GL VRGQ T T  R
Sbjct: 63  LNRQKDIVEGKYFQLTSASLDAKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 120


>gi|297712488|ref|XP_002832792.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
          Length = 152

 Score = 37.4 bits (85), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L   EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71

Query: 58  QAIEQ----DYQV-------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPV 98
           Q   Q    D+ +       +G   + +A         +++RL  +  +RGLRH  G  V
Sbjct: 72  QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|7861934|gb|AAF70446.1|AF210641_1 Ke3 [Danio rerio]
          Length = 126

 Score = 37.0 bits (84), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 22/118 (18%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-------RQAIEQDYQ 65
           +++  A+  I G+G + +  +  K  I   +R  +L E EV ++       RQ    D+ 
Sbjct: 2   RKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDWF 61

Query: 66  V-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           +       +G   + +A         +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 62  LNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 119


>gi|56754053|gb|AAW25217.1| unknown [Schistosoma japonicum]
          Length = 149

 Score = 36.2 bits (82), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 25/138 (18%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ- 65
            NI    +++ A+  I G+G + +  +  K  I   +R  +L + EV ++   +    Q 
Sbjct: 15  TNIGGQLKIMYAITSIRGVGSRYANVVGKKADIALTKRAGELTDDEVEKLVPVMSNPSQY 74

Query: 66  ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
                                +   L   +  +++RL  +  +RG+RH  GL VRGQ T 
Sbjct: 75  KIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRVRGQHTK 134

Query: 105 TNARTRKKFGKGGVARKR 122
           T  R  +     GV+RK+
Sbjct: 135 TTGRRGRTV---GVSRKK 149


>gi|157361543|gb|ABV44729.1| 40S ribosomal protein S18-like protein [Phlebotomus papatasi]
          Length = 152

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R    NI   ++V  A+  I G+G + +     K  +   +R  +  + EV ++   I
Sbjct: 12  ILRFMNTNIDGKRKVPIAMTAIKGVGRRYANIALKKADVDLSKRAGECTDEEVERVVAVI 71

Query: 61  EQD---------------------YQVEGD-LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                       YQ+    L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRIYKIPDWFLNRQKDVTDGKYYQLTSAVLESKLRDDLERLKKICAHRGLRHHWGLRV 131

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 132 RGQHTKTTGR 141


>gi|115484775|ref|NP_001067531.1| Os11g0224300 [Oryza sativa Japonica Group]
 gi|113644753|dbj|BAF27894.1| Os11g0224300 [Oryza sativa Japonica Group]
          Length = 383

 Score = 36.2 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQ---DICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           V +  AKR  + LC+ +   +K  +   ++  KL +PP+ +VH +V   V  +++AI  D
Sbjct: 270 VQMSVAKRSCQKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVV--HVSLLKKAIRPD 327

Query: 64  YQVEGDL 70
            QV+ DL
Sbjct: 328 VQVQADL 334


>gi|296214070|ref|XP_002753551.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus]
          Length = 152

 Score = 35.8 bits (81), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++R   +  ++GLRH   L 
Sbjct: 72  QNPRQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDLERQKKIWAHKGLRHFWDLR 130

Query: 98  VRGQRTHTNAR 108
           VRGQ T T  R
Sbjct: 131 VRGQHTKTTGR 141


>gi|253745946|gb|EET01539.1| Ribosomal protein S18 [Giardia intestinalis ATCC 50581]
          Length = 154

 Score = 35.8 bits (81), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 22/113 (19%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE---------------Q 62
           AL  I GIG + +     K  I   +R  +L  +E   + + +E                
Sbjct: 30  ALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLEDPLSHGIPAWMLNRNN 89

Query: 63  DYQVEGDLR---RTVA----MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           D++   D+     T+A    M+++RL    C RG+RH   L VRGQ T +  R
Sbjct: 90  DFESGKDMHILVNTIASTHRMDLERLRKTRCERGVRHHHNLKVRGQHTKSTGR 142


>gi|149940233|emb|CAM32184.1| ribosomal protein S18 [Sparus aurata]
          Length = 132

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 24/119 (20%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIRQAIEQDYQV--- 66
           +++  A+  I G+G + +  +  K  I   +R  +L + EV   + I Q   Q Y++   
Sbjct: 4   RKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERAVTIMQNPRQ-YKIPDW 62

Query: 67  ---------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                    +G   + +A         +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 63  FLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGR 121


>gi|238597051|ref|XP_002394222.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
 gi|215462901|gb|EEB95152.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
          Length = 79

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 14/84 (16%)

Query: 39  IPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +PP R+   +V+ +  QI  +   D ++  DL        +RL  +  +RGLRH  GL V
Sbjct: 9   VPPARK--NIVDGKDYQI-LSTNVDSKLRDDL--------ERLKKIRAHRGLRHFWGLRV 57

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 58  RGQHTKTTGRRGKTV---GVSKKR 78


>gi|311261966|ref|XP_003128953.1| PREDICTED: 40S ribosomal protein S18-like [Sus scrofa]
          Length = 200

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+    I   +++  A   I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 60  ILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIM 119

Query: 58  QAIEQDYQV------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH  GL 
Sbjct: 120 QNPGQ-YKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLR 178

Query: 98  VRGQRTHTNAR 108
           V GQ T T  R
Sbjct: 179 VGGQHTKTTGR 189


>gi|270261413|ref|ZP_06189686.1| indigoidine synthase A like protein [Serratia odorifera 4Rx13]
 gi|270044897|gb|EFA17988.1| indigoidine synthase A like protein [Serratia odorifera 4Rx13]
          Length = 312

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 9/107 (8%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G N+ +  R  R L +I   G   +  + + + I     +H      +  + +  EQ + 
Sbjct: 88  GHNVAKVSR--RDLPFIVAAGKHGATTVASTMIIAEMAGIHVFATGGIGGVHRGAEQTFD 145

Query: 66  VEGDLRRTVAMNI-------KRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           +  DL+     N+       K ++DLG         G+P+ G RT T
Sbjct: 146 ISADLQELARTNVAVICAGAKSILDLGLTTEYLETHGVPLIGYRTQT 192


>gi|218884677|ref|YP_002429059.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
 gi|218766293|gb|ACL11692.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
          Length = 174

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++     +V  L  + G+G+  S  IC  L + PE+RV  L +  V  I + +
Sbjct: 22  IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81

Query: 61  ---------------EQDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY    +L  T       V  +I+R   +  +RG+RH  GL V
Sbjct: 82  RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141

Query: 99  RG 100
           RG
Sbjct: 142 RG 143


>gi|1086185|pir||S51064 ribosomal protein S13 - Thermus aquaticus (fragment)
          Length = 24

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/24 (75%), Positives = 19/24 (79%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGI 25
          ARIAGV IPR KRV  AL YI+GI
Sbjct: 1  ARIAGVEIPRNKRVDVALTYIYGI 24


>gi|114669049|ref|XP_511822.2| PREDICTED: similar to ribosomal protein [Pan troglodytes]
          Length = 152

 Score = 35.4 bits (80), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI    ++  A+  I G+G + +  +  K  I   +R  +L+E EV ++    
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELIEDEVERVVTIM 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +  +RGL H  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYNQVLANGLDNELREDLERLKKIRAHRGLSHFWGLRV 131

Query: 99  RGQRTHTNA 107
           RG+ T T  
Sbjct: 132 RGRHTKTTG 140


>gi|224980450|gb|ACN73088.1| COSII_At5g14320 [Solanum dulcamara]
          Length = 83

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +  E +V + L E E+I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDLSEEELI 83


>gi|262192754|gb|ACY30447.1| RPS18.A-like protein [Liriodendron tulipifera]
          Length = 197

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 22/139 (15%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC----------NKLAIPPERRVHQLVES- 51
           R+   N+   ++++ AL  I GIG + +  +C           +L+      +  +V + 
Sbjct: 62  RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKGRRRHEQEAGELSAAELENLMVIVANP 121

Query: 52  EVIQIRQAIEQDYQVEGDLRRTV---AMNIKRLMDLGC-----YRGLRHRRGLPVRGQRT 103
           +  + +   EQ+  ++G     V   A+++K   D        +RGLRH  GL VRGQ T
Sbjct: 122 DSSRFQTGFEQEEGLQGWRYSQVVSNALDMKLRDDWTTEEDQDHRGLRHYWGLRVRGQHT 181

Query: 104 HTNARTRKKFGKGGVARKR 122
            T  R  K     GV++KR
Sbjct: 182 KTTGRRGKTV---GVSKKR 197


>gi|148709378|gb|EDL41324.1| mCG121998 [Mus musculus]
          Length = 134

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 22/129 (17%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE------ 61
           NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   ++      
Sbjct: 1   NINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYS 60

Query: 62  --------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
                   Q Y  +G   + +A         +++RL  +  +R L H  GL VRGQ T T
Sbjct: 61  IPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQHTKT 120

Query: 106 NARTRKKFG 114
             R  +  G
Sbjct: 121 TGRRGRTMG 129


>gi|224980452|gb|ACN73089.1| COSII_At5g14320 [Datura inoxia]
          Length = 83

 Score = 35.0 bits (79), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +  E +V + L E E+I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDLSEEELI 83


>gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           cellulosilyticus DSM 2522]
          Length = 264

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 27/41 (65%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           +I GIG   S +IC +  + PER++++L   EV+ + Q+I+
Sbjct: 161 FISGIGNLYSDEICYEARLLPERKMNELSTQEVLDLFQSIQ 201


>gi|109126207|ref|XP_001091975.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
          Length = 149

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 22/131 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLT 71

Query: 57  ---RQAIEQDYQV-------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPV 98
              RQ    D+ +       +G   + +A         +++RL  +   RGL H  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAPRGLCHFWGLRV 131

Query: 99  RGQRTHTNART 109
           RGQ T T   T
Sbjct: 132 RGQHTKTTGLT 142


>gi|317494288|ref|ZP_07952703.1| indigoidine synthase A like protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917743|gb|EFV39087.1| indigoidine synthase A like protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 312

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 9/106 (8%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G N+ +  R  R L +I   G   +  + + + I     +H      +  + +  EQ + 
Sbjct: 88  GHNVAKVSR--RDLPFIVAAGKNGATTVASTMIIAEMAGIHVFATGGIGGVHRGAEQTFD 145

Query: 66  VEGDLRRTVAMNI-------KRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +  DL+     N+       K ++DLG         G+P+ G RT 
Sbjct: 146 ISADLQELAKTNVAVICAGAKSILDLGLTTEYLETHGVPLIGYRTQ 191


>gi|23464609|ref|NP_696977.1| ribosomal protein S13 [Monosiga brevicollis ATCC 50154]
 gi|23344072|gb|AAN28348.1| ribosomal protein S13 [Monosiga brevicollis]
          Length = 166

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +E +L    +  I  L+ +   RG R + G P +GQRT +NA T K+  K
Sbjct: 112 IEENLNDYESSQINTLIQINALRGRRIKMGYPSKGQRTRSNAITAKRINK 161


>gi|62733753|gb|AAX95862.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
 gi|77549399|gb|ABA92196.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 332

 Score = 34.7 bits (78), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKSSQ---DICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           V +  AKR  + LC+ +   +K  +   ++  KL +PP+ +VH +V   +  +++AI  D
Sbjct: 219 VQMSVAKRSCQKLCFRYFGPYKILERIGEVAYKLDLPPQSQVHPVVHVSL--LKKAIRPD 276

Query: 64  YQVEGDL 70
            QV+ DL
Sbjct: 277 VQVQADL 283


>gi|82952669|ref|XP_893065.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|94395028|ref|XP_001001941.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 186

 Score = 34.7 bits (78), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 22/133 (16%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE-- 61
           +   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   ++  
Sbjct: 49  VLNTNINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNP 108

Query: 62  ------------QDYQVEGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLPVRGQ 101
                       Q Y  +G   + +A         +++RL  +  +R L H  GL VRGQ
Sbjct: 109 RQYSIPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQ 168

Query: 102 RTHTNARTRKKFG 114
            T T  R  +  G
Sbjct: 169 HTKTTGRRGRTMG 181


>gi|551831|gb|AAA83903.1| ribosomal protein S13 [Escherichia coli]
 gi|554544|gb|AAA72457.1| S13 protein (gtg start codon) [synthetic construct]
          Length = 36

 Score = 34.3 bits (77), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/33 (54%), Positives = 22/33 (66%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
          MARIAG+NIP  K  V AL  I+G+G   S+ I
Sbjct: 1  MARIAGINIPDHKHAVIALTSIYGVGKTRSKAI 33


>gi|156042836|ref|XP_001587975.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980]
 gi|154695602|gb|EDN95340.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 37

 Score = 34.3 bits (77), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 84  LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +G YRG RH  GLPVRGQ T     T +K  K
Sbjct: 1   MGSYRGRRHAMGLPVRGQNTKGQISTARKLNK 32


>gi|342763|gb|AAA70291.1| ribosomal protein S13 [Oenothera berteroana]
          Length = 26

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 15/22 (68%), Positives = 19/22 (86%)

Query: 91  RHRRGLPVRGQRTHTNARTRKK 112
           RH+ G P+RGQR+HTNART +K
Sbjct: 1   RHQDGSPLRGQRSHTNARTSRK 22


>gi|224980696|gb|ACN73211.1| COSII_At5g14320 [Solanum bulbocastanum]
 gi|224980700|gb|ACN73213.1| COSII_At5g14320 [Solanum trifidum]
 gi|224980702|gb|ACN73214.1| COSII_At5g14320 [Solanum polyadenium]
          Length = 83

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +  E +V + + E E+I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDMSEEELI 83


>gi|224980706|gb|ACN73216.1| COSII_At5g14320 [Solanum andreanum]
          Length = 83

 Score = 34.3 bits (77), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ-LVESEVI 54
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +  E +V + + E E+I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM--ENKVMKDMSEEELI 83


>gi|7525003|ref|NP_050101.1| ribosomal protein S13 [Dictyostelium discoideum]
 gi|74833664|sp|O21038|RT13_DICDI RecName: Full=Ribosomal protein S13, mitochondrial
 gi|2627258|dbj|BAA23575.1| ribosomal protein S13 [Dictyostelium discoideum]
 gi|4958906|dbj|BAA78083.1| ribosomal protein S13 [Dictyostelium discoideum]
          Length = 169

 Score = 34.3 bits (77), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 22  IHGIGFKSSQDI---CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           I G+ F  +Q +      +A     ++ Q  E +++ I Q  +  Y     L+      I
Sbjct: 24  IKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVDILQRFKGLYSHNYGLKEEALAKI 83

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           +R+ +   YR +R R+G PVRG RT +NA T K+
Sbjct: 84  RRIEN--VYRYIRVRQGYPVRG-RTKSNANTVKR 114


>gi|301139496|gb|ADK66163.1| COSII_At5g14320 [Solanum pascoense]
          Length = 77

 Score = 34.3 bits (77), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 66


>gi|301139216|gb|ADK66023.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139540|gb|ADK66185.1| COSII_At5g14320 [Solanum piurae]
          Length = 67

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 56


>gi|327186831|gb|AEA30820.1| hypothetical protein [Solanum agrimonifolium]
          Length = 73

 Score = 34.3 bits (77), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|327186939|gb|AEA30874.1| hypothetical protein [Solanum hjertingii]
 gi|327186943|gb|AEA30876.1| hypothetical protein [Solanum hjertingii]
 gi|327186947|gb|AEA30878.1| hypothetical protein [Solanum hjertingii]
 gi|327186951|gb|AEA30880.1| hypothetical protein [Solanum hjertingii]
 gi|327186955|gb|AEA30882.1| hypothetical protein [Solanum hjertingii]
 gi|327186959|gb|AEA30884.1| hypothetical protein [Solanum hjertingii]
 gi|327187061|gb|AEA30935.1| hypothetical protein [Solanum schenckii]
 gi|327187067|gb|AEA30938.1| hypothetical protein [Solanum schenckii]
 gi|327187073|gb|AEA30941.1| hypothetical protein [Solanum schenckii]
 gi|327187079|gb|AEA30944.1| hypothetical protein [Solanum schenckii]
 gi|327187083|gb|AEA30946.1| hypothetical protein [Solanum schenckii]
 gi|327187089|gb|AEA30949.1| hypothetical protein [Solanum schenckii]
 gi|327187097|gb|AEA30953.1| hypothetical protein [Solanum stoloniferum]
 gi|327187101|gb|AEA30955.1| hypothetical protein [Solanum stoloniferum]
 gi|327187105|gb|AEA30957.1| hypothetical protein [Solanum stoloniferum]
 gi|327187109|gb|AEA30959.1| hypothetical protein [Solanum stoloniferum]
 gi|327187123|gb|AEA30966.1| hypothetical protein [Solanum stoloniferum]
 gi|327187129|gb|AEA30969.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 33.9 bits (76), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|320101541|ref|YP_004177133.1| 30S ribosomal protein S13P [Desulfurococcus mucosus DSM 2162]
 gi|319753893|gb|ADV65651.1| SSU ribosomal protein S13P [Desulfurococcus mucosus DSM 2162]
          Length = 162

 Score = 33.9 bits (76), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++     +V  L  + G+G+  S  +C  L + P +R   L +  V  I + +
Sbjct: 10  IVRILETDVDGELPLVYGLSEVKGLGYAFSLAVCRVLGLDPRQRTGFLSDDTVKSIEEVV 69

Query: 61  E---------------QDYQVEGDLRRT-------VAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    DL  T       V  +I+R   +  +RG+RH  GL V
Sbjct: 70  RNPGKYGIPAWIYNRRKDYATGQDLHLTSANLIYYVKEDIEREKRIKSWRGIRHALGLKV 129

Query: 99  RG 100
           RG
Sbjct: 130 RG 131


>gi|327186963|gb|AEA30886.1| hypothetical protein [Solanum hougasii]
          Length = 73

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|301139212|gb|ADK66021.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 66

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 55


>gi|327186829|gb|AEA30819.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186833|gb|AEA30821.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186835|gb|AEA30822.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186859|gb|AEA30834.1| hypothetical protein [Solanum albicans]
 gi|327186875|gb|AEA30842.1| hypothetical protein [Solanum chomatophilum]
 gi|327186887|gb|AEA30848.1| hypothetical protein [Solanum colombianum]
 gi|327186965|gb|AEA30887.1| hypothetical protein [Solanum hougasii]
 gi|327186971|gb|AEA30890.1| hypothetical protein [Solanum hougasii]
 gi|327186977|gb|AEA30893.1| hypothetical protein [Solanum hougasii]
 gi|327186983|gb|AEA30896.1| hypothetical protein [Solanum hougasii]
 gi|327186989|gb|AEA30899.1| hypothetical protein [Solanum hougasii]
 gi|327187001|gb|AEA30905.1| hypothetical protein [Solanum iopetalum]
 gi|327187007|gb|AEA30908.1| hypothetical protein [Solanum iopetalum]
 gi|327187013|gb|AEA30911.1| hypothetical protein [Solanum iopetalum]
 gi|327187025|gb|AEA30917.1| hypothetical protein [Solanum iopetalum]
 gi|327187043|gb|AEA30926.1| hypothetical protein [Solanum moscopanum]
 gi|327187045|gb|AEA30927.1| hypothetical protein [Solanum moscopanum]
 gi|327187049|gb|AEA30929.1| hypothetical protein [Solanum moscopanum]
 gi|327187051|gb|AEA30930.1| hypothetical protein [Solanum moscopanum]
 gi|327187055|gb|AEA30932.1| hypothetical protein [Solanum piurae]
 gi|327187063|gb|AEA30936.1| hypothetical protein [Solanum schenckii]
 gi|327187069|gb|AEA30939.1| hypothetical protein [Solanum schenckii]
 gi|327187085|gb|AEA30947.1| hypothetical protein [Solanum schenckii]
 gi|327187091|gb|AEA30950.1| hypothetical protein [Solanum schenckii]
 gi|327187125|gb|AEA30967.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|327186969|gb|AEA30889.1| hypothetical protein [Solanum hougasii]
 gi|327186975|gb|AEA30892.1| hypothetical protein [Solanum hougasii]
 gi|327186981|gb|AEA30895.1| hypothetical protein [Solanum hougasii]
 gi|327186987|gb|AEA30898.1| hypothetical protein [Solanum hougasii]
          Length = 73

 Score = 33.9 bits (76), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|327186889|gb|AEA30849.1| hypothetical protein [Solanum cardiophyllum]
          Length = 68

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|327186873|gb|AEA30841.1| hypothetical protein [Solanum chomatophilum]
          Length = 57

 Score = 33.9 bits (76), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 16 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 51


>gi|301139434|gb|ADK66132.1| COSII_At5g14320 [Solanum jalcae]
          Length = 74

 Score = 33.9 bits (76), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 28 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 63


>gi|327186933|gb|AEA30871.1| hypothetical protein [Solanum dulcamara]
          Length = 73

 Score = 33.9 bits (76), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|327186883|gb|AEA30846.1| hypothetical protein [Solanum colombianum]
          Length = 73

 Score = 33.9 bits (76), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|301139172|gb|ADK66001.1| COSII_At5g14320 [Solanum andreanum]
          Length = 77

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 66


>gi|27671346|ref|XP_234780.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|109482109|ref|XP_001058023.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score = 33.9 bits (76), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 24/131 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV---IQIR 57
           + R+   NI    ++  A+  I G+G + +  +  K  I   +R  +L E EV   I I 
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 58  QAIEQDYQV------------EGDLRRTVAM--------NIKRLMDLGCYRGLRHRRGLP 97
           Q   Q Y++            +G   + +A         +++RL  +  +RGLRH   L 
Sbjct: 72  QNPRQ-YKIPDWFLDRQKDVKDGKYSQVLAKGLDNKLHEDLERLKKIRAHRGLRHFWDLR 130

Query: 98  VRGQRTHTNAR 108
           V GQ + T  R
Sbjct: 131 VGGQHSKTTGR 141


>gi|301139574|gb|ADK66202.1| COSII_At5g14320 [Solanum tarnii]
 gi|301139576|gb|ADK66203.1| COSII_At5g14320 [Solanum tarnii]
 gi|301139578|gb|ADK66204.1| COSII_At5g14320 [Solanum tarnii]
          Length = 77

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


>gi|301139364|gb|ADK66097.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139366|gb|ADK66098.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139374|gb|ADK66102.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139376|gb|ADK66103.1| COSII_At5g14320 [Solanum huancabambense]
          Length = 77

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


>gi|301139164|gb|ADK65997.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139166|gb|ADK65998.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139168|gb|ADK65999.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139170|gb|ADK66000.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139174|gb|ADK66002.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139176|gb|ADK66003.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139178|gb|ADK66004.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139180|gb|ADK66005.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139218|gb|ADK66024.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139220|gb|ADK66025.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139224|gb|ADK66027.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139226|gb|ADK66028.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139228|gb|ADK66029.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139234|gb|ADK66032.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139236|gb|ADK66033.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139238|gb|ADK66034.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139242|gb|ADK66036.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139244|gb|ADK66037.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139246|gb|ADK66038.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139254|gb|ADK66042.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139262|gb|ADK66046.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139264|gb|ADK66047.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139266|gb|ADK66048.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139362|gb|ADK66096.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139426|gb|ADK66128.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139428|gb|ADK66129.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139432|gb|ADK66131.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139462|gb|ADK66146.1| COSII_At5g14320 [Solanum minutifoliolum]
 gi|301139472|gb|ADK66151.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139500|gb|ADK66165.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139502|gb|ADK66166.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139504|gb|ADK66167.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139506|gb|ADK66168.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139508|gb|ADK66169.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139512|gb|ADK66171.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139514|gb|ADK66172.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139518|gb|ADK66174.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139520|gb|ADK66175.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139536|gb|ADK66183.1| COSII_At5g14320 [Solanum piurae]
 gi|301139542|gb|ADK66186.1| COSII_At5g14320 [Solanum piurae]
 gi|301139566|gb|ADK66198.1| COSII_At5g14320 [Solanum solisii]
 gi|301139584|gb|ADK66207.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139586|gb|ADK66208.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139588|gb|ADK66209.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139590|gb|ADK66210.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139592|gb|ADK66211.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139594|gb|ADK66212.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139596|gb|ADK66213.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139598|gb|ADK66214.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139600|gb|ADK66215.1| COSII_At5g14320 [Solanum tuquerrense]
          Length = 77

 Score = 33.9 bits (76), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


>gi|326516128|dbj|BAJ88087.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 100

 Score = 33.5 bits (75), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 58  DLERLKKIKAHRGLRHYWGLRVRGQHTKTTGR 89


>gi|158187718|gb|ABW23148.1| ribosomal protein rps18 [Arenicola marina]
          Length = 114

 Score = 33.5 bits (75), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 22/101 (21%)

Query: 30  SQDICNKLAIPPERRVHQLVESEVIQI-------RQAIEQDY--------------QVEG 68
           S  +C K  +   +R  +L + EV +I       RQ    D+              Q+  
Sbjct: 3   SHVVCKKADVDTSKRAGELSDEEVEKIVTIMSNPRQYKIPDWFLNRQKDVKDGKFSQIMS 62

Query: 69  D-LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
           + L   +  +++RL  +  +RGLRH  GL VRGQ T T  R
Sbjct: 63  NVLDSKIREDLERLKKIRVHRGLRHYWGLRVRGQHTKTTGR 103


>gi|224980698|gb|ACN73212.1| COSII_At5g14320 [Solanum stenophyllidium]
          Length = 83

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63


>gi|327187113|gb|AEA30961.1| hypothetical protein [Solanum stoloniferum]
 gi|327187137|gb|AEA30973.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 58


>gi|313509192|gb|ADR65906.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509196|gb|ADR65908.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509200|gb|ADR65910.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509206|gb|ADR65913.1| hypothetical protein [Solanum colombianum]
 gi|313509212|gb|ADR65916.1| hypothetical protein [Solanum colombianum]
 gi|313509214|gb|ADR65917.1| hypothetical protein [Solanum colombianum]
 gi|313509220|gb|ADR65920.1| hypothetical protein [Solanum colombianum]
 gi|313509222|gb|ADR65921.1| hypothetical protein [Solanum colombianum]
 gi|313509226|gb|ADR65923.1| hypothetical protein [Solanum colombianum]
 gi|313509232|gb|ADR65926.1| hypothetical protein [Solanum colombianum]
 gi|313509234|gb|ADR65927.1| hypothetical protein [Solanum colombianum]
 gi|313509236|gb|ADR65928.1| hypothetical protein [Solanum colombianum]
 gi|313509240|gb|ADR65930.1| hypothetical protein [Solanum colombianum]
 gi|313509242|gb|ADR65931.1| hypothetical protein [Solanum colombianum]
 gi|313509246|gb|ADR65933.1| hypothetical protein [Solanum colombianum]
 gi|313509250|gb|ADR65935.1| hypothetical protein [Solanum colombianum]
 gi|313509254|gb|ADR65937.1| hypothetical protein [Solanum flahaultii]
 gi|313509256|gb|ADR65938.1| hypothetical protein [Solanum flahaultii]
 gi|313509258|gb|ADR65939.1| hypothetical protein [Solanum flahaultii]
 gi|313509264|gb|ADR65942.1| hypothetical protein [Solanum garcia-barrigae]
 gi|313509266|gb|ADR65943.1| hypothetical protein [Solanum lobbianum]
 gi|313509270|gb|ADR65945.1| hypothetical protein [Solanum longiconicum]
 gi|313509274|gb|ADR65947.1| hypothetical protein [Solanum longiconicum]
 gi|313509280|gb|ADR65950.1| hypothetical protein [Solanum longiconicum]
 gi|313509296|gb|ADR65958.1| hypothetical protein [Solanum moscopanum]
 gi|313509298|gb|ADR65959.1| hypothetical protein [Solanum moscopanum]
 gi|313509302|gb|ADR65961.1| hypothetical protein [Solanum moscopanum]
 gi|313509306|gb|ADR65963.1| hypothetical protein [Solanum moscopanum]
 gi|313509308|gb|ADR65964.1| hypothetical protein [Solanum moscopanum]
 gi|313509310|gb|ADR65965.1| hypothetical protein [Solanum moscopanum]
 gi|313509312|gb|ADR65966.1| hypothetical protein [Solanum moscopanum]
 gi|313509316|gb|ADR65968.1| hypothetical protein [Solanum moscopanum]
 gi|313509318|gb|ADR65969.1| hypothetical protein [Solanum moscopanum]
 gi|313509328|gb|ADR65974.1| hypothetical protein [Solanum orocense]
 gi|313509330|gb|ADR65975.1| hypothetical protein [Solanum otites]
 gi|313509332|gb|ADR65976.1| hypothetical protein [Solanum oxycarpum]
 gi|313509336|gb|ADR65978.1| hypothetical protein [Solanum oxycarpum]
 gi|313509340|gb|ADR65980.1| hypothetical protein [Solanum oxycarpum]
 gi|313509356|gb|ADR65988.1| hypothetical protein [Solanum sucubunense]
 gi|313509358|gb|ADR65989.1| hypothetical protein [Solanum sucubunense]
 gi|313509360|gb|ADR65990.1| hypothetical protein [Solanum tundalomense]
 gi|313509366|gb|ADR65993.1| hypothetical protein [Solanum tundalomense]
 gi|313509368|gb|ADR65994.1| hypothetical protein [Solanum tundalomense]
 gi|313509372|gb|ADR65996.1| hypothetical protein [Solanum tundalomense]
 gi|313509376|gb|ADR65998.1| hypothetical protein [Solanum tundalomense]
 gi|313509378|gb|ADR65999.1| hypothetical protein [Solanum tundalomense]
 gi|313509420|gb|ADR66020.1| hypothetical protein [Solanum woodsonii]
          Length = 78

 Score = 33.5 bits (75), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63


>gi|301139260|gb|ADK66045.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 75

 Score = 33.5 bits (75), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


>gi|313509354|gb|ADR65987.1| hypothetical protein [Solanum sucubunense]
          Length = 78

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63


>gi|313509320|gb|ADR65970.1| hypothetical protein [Solanum moscopanum]
 gi|313509364|gb|ADR65992.1| hypothetical protein [Solanum tundalomense]
          Length = 78

 Score = 33.5 bits (75), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 63


>gi|301139558|gb|ADK66194.1| COSII_At5g14320 [Solanum x sambucinum]
          Length = 77

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


>gi|301139200|gb|ADK66015.1| COSII_At5g14320 [Solanum stenophyllidium]
 gi|301139202|gb|ADK66016.1| COSII_At5g14320 [Solanum stenophyllidium]
 gi|301139570|gb|ADK66200.1| COSII_At5g14320 [Solanum stenophyllidium]
          Length = 77

 Score = 33.5 bits (75), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDI 33
           R+ GV +P  KRV  +L YIHGIG  S++ I
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQI 62


Searching..................................................done


Results from round 2




>gi|210611151|ref|ZP_03288765.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787]
 gi|210152138|gb|EEA83145.1| hypothetical protein CLONEX_00955 [Clostridium nexile DSM 1787]
          Length = 178

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ R   L + EV QI   I
Sbjct: 57  MARIAGVDLPRDKRVEIGLTYIYGIGRVSATKILEAAGVNPDTRCRDLTDEEVKQISAVI 116

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ YQVEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 117 DESYQVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 176

Query: 121 KR 122
           K+
Sbjct: 177 KK 178


>gi|167036826|ref|YP_001664404.1| 30S ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039545|ref|YP_001662530.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X514]
 gi|256752657|ref|ZP_05493509.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289579117|ref|YP_003477744.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
 gi|297545304|ref|YP_003677606.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|300915204|ref|ZP_07132519.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
 gi|307266989|ref|ZP_07548505.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|307725128|ref|YP_003904879.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
 gi|320115248|ref|YP_004185407.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|326390636|ref|ZP_08212191.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
 gi|226712796|sp|B0KCM5|RS13_THEP3 RecName: Full=30S ribosomal protein S13
 gi|226712797|sp|B0K5R8|RS13_THEPX RecName: Full=30S ribosomal protein S13
 gi|166853785|gb|ABY92194.1| ribosomal protein S13 [Thermoanaerobacter sp. X514]
 gi|166855660|gb|ABY94068.1| ribosomal protein S13 [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748477|gb|EEU61529.1| ribosomal protein S13 [Thermoanaerobacter ethanolicus CCSD1]
 gi|289528830|gb|ADD03182.1| 30S ribosomal protein S13 [Thermoanaerobacter italicus Ab9]
 gi|296843079|gb|ADH61595.1| 30S ribosomal protein S13 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|300888928|gb|EFK84075.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X561]
 gi|306917974|gb|EFN48232.1| 30S ribosomal protein S13 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|307582189|gb|ADN55588.1| 30S ribosomal protein S13 [Thermoanaerobacter sp. X513]
 gi|319928339|gb|ADV79024.1| 30S ribosomal protein S13 [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|325993314|gb|EGD51751.1| 30S ribosomal protein S13 [Thermoanaerobacter ethanolicus JW 200]
          Length = 122

 Score =  193 bits (493), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S +I  K  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEEEVSRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLR+ VAMNIKRLMD+GCYRG+RH+RGLPVRGQRT TNARTRK   K    +
Sbjct: 61  DKEYKVEGDLRKEVAMNIKRLMDIGCYRGIRHKRGLPVRGQRTRTNARTRKGPRKTVAKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|20808635|ref|NP_623806.1| 30S ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
 gi|32363349|sp|Q8R7X9|RS13_THETN RecName: Full=30S ribosomal protein S13
 gi|20517269|gb|AAM25410.1| Ribosomal protein S13 [Thermoanaerobacter tengcongensis MB4]
          Length = 122

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRSRSKEILAKAGVNPDTRVRDLTEDEVSKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEGDLR+ VAMNIKRL+D+GCYRG+RH+ GLPVRGQRT TNARTRK   K    +
Sbjct: 61  EKEYKVEGDLRKEVAMNIKRLIDIGCYRGIRHKLGLPVRGQRTRTNARTRKGPRKTVAKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153812442|ref|ZP_01965110.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174]
 gi|149831367|gb|EDM86455.1| hypothetical protein RUMOBE_02841 [Ruminococcus obeum ATCC 29174]
          Length = 194

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + +V +I   I
Sbjct: 73  MARIAGVDLPRDKRIEIGLTYIYGIGRTSADKILAQAGVNPDIRVRDLTDDDVKKISAVI 132

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 133 DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 192

Query: 121 KR 122
           K+
Sbjct: 193 KK 194


>gi|296131861|ref|YP_003639108.1| 30S ribosomal protein S13 [Thermincola sp. JR]
 gi|296030439|gb|ADG81207.1| 30S ribosomal protein S13 [Thermincola potens JR]
          Length = 123

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  ++  I ++  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGRPTANQILSQTGVNPDTRVRDLTEEEVAKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNYKVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPAKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|296534009|ref|ZP_06896525.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957]
 gi|296265675|gb|EFH11784.1| 30S ribosomal protein S13 [Roseomonas cervicalis ATCC 49957]
          Length = 177

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ +L YI+GIG  +++ IC +L IP +RRV+QL + E+++IR+ I
Sbjct: 53  MARIAGVNIPTNKRVLISLRYIYGIGPANAKVICEQLGIPEDRRVNQLTDEEILKIRELI 112

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR  AMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK        +
Sbjct: 113 DREYRVEGDLRRENAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGKAVAIAGK 172

Query: 121 KR 122
           K+
Sbjct: 173 KK 174


>gi|258512645|ref|YP_003186079.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479371|gb|ACV59690.1| 30S ribosomal protein S13 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 122

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P +RV  L E EV+++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|288958719|ref|YP_003449060.1| small subunit ribosomal protein S13 [Azospirillum sp. B510]
 gi|288911027|dbj|BAI72516.1| small subunit ribosomal protein S13 [Azospirillum sp. B510]
          Length = 122

 Score =  190 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YIHGIG   +++IC KL IP ERRV++L + EV++IR+ I
Sbjct: 1   MARIAGVNIPAQKRVEIGLTYIHGIGPFKAKEICAKLEIPAERRVNELTDDEVLKIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYRVEGDLRREVAMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218289981|ref|ZP_03494158.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
 gi|218239966|gb|EED07153.1| ribosomal protein S13 [Alicyclobacillus acidocaldarius LAA1]
          Length = 122

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P +RV  L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSNKILAATGIDPNKRVRDLTEDEVVRLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEGDLRR VAMNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  ERNYKVEGDLRREVAMNIKRLIDIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254466762|ref|ZP_05080173.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I]
 gi|206687670|gb|EDZ48152.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium Y4I]
          Length = 122

 Score =  190 bits (484), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC+ + I P RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICDAVGIDPTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269792768|ref|YP_003317672.1| 30S ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100403|gb|ACZ19390.1| ribosomal protein S13 [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 125

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +S+ I     + P RR   L + E  +IR  I
Sbjct: 1   MARIAGVDLPREKRIEIALTYIYGIGLTTSRKILASTGVDPNRRTKDLTDEEAQRIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENNYKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|110678752|ref|YP_681759.1| 30S ribosomal protein S13 [Roseobacter denitrificans OCh 114]
 gi|122972937|sp|Q16AC0|RS13_ROSDO RecName: Full=30S ribosomal protein S13
 gi|109454868|gb|ABG31073.1| ribosomal protein S13 [Roseobacter denitrificans OCh 114]
          Length = 122

 Score =  190 bits (483), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKQICEAVGIDPSRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|167771242|ref|ZP_02443295.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM
           17241]
 gi|167666493|gb|EDS10623.1| hypothetical protein ANACOL_02600 [Anaerotruncus colihominis DSM
           17241]
          Length = 122

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI GIG K++Q I     + P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPKDKRVEIGLTYIFGIGRKTAQQILEATGVNPDTRVKDLTEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DHNVHVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83593998|ref|YP_427750.1| 30S ribosomal protein S13 [Rhodospirillum rubrum ATCC 11170]
 gi|91207722|sp|Q2RQY2|RS13_RHORT RecName: Full=30S ribosomal protein S13
 gi|83576912|gb|ABC23463.1| SSU ribosomal protein S13P [Rhodospirillum rubrum ATCC 11170]
          Length = 122

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   + +IC +  I   RRV+ L + EV++IR+ I
Sbjct: 1   MARIAGVNIPSNKRVCIALTYIYGIGRTKAGEICERTGIAENRRVNDLSDDEVVRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VAMNIKR+MDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSEYKVEGDLRREVAMNIKRIMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325293314|ref|YP_004279178.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3]
 gi|325061167|gb|ADY64858.1| 30S ribosomal protein S13 [Agrobacterium sp. H13-3]
          Length = 122

 Score =  189 bits (482), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 104/122 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ +P ++RVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGLPADKRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319404403|emb|CBI78006.1| 30S ribosomal protein S13 [Bartonella rochalimae ATCC BAA-1498]
          Length = 122

 Score =  189 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  K+ I PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIEKVGISPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159184981|ref|NP_354901.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58]
 gi|32363355|sp|Q8UE39|RS13_AGRT5 RecName: Full=30S ribosomal protein S13
 gi|159140257|gb|AAK87686.2| 30S ribosomal protein S13 [Agrobacterium tumefaciens str. C58]
          Length = 122

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 90/122 (73%), Positives = 104/122 (85%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I +K+ IP E+RVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMDKVGIPAEKRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|84499818|ref|ZP_00998106.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597]
 gi|84392962|gb|EAQ05173.1| 30S ribosomal protein S13 [Oceanicola batsensis HTCC2597]
          Length = 122

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+Q IC    I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPSSAQSICEATGIDQTRRVNELSDAEVLTIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312880346|ref|ZP_07740146.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260]
 gi|310783637|gb|EFQ24035.1| SSU ribosomal protein S13P [Aminomonas paucivorans DSM 12260]
          Length = 125

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  SS+ I     + P+ R   L + E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLTSSKKILAATGVNPDTRTKDLTDEEAQRIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR VAMNIKRLMD+GCYRGLRHR GLPVRGQRT TNARTRK   +    +
Sbjct: 61  ENQFKVEGDLRREVAMNIKRLMDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126737030|ref|ZP_01752765.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6]
 gi|126721615|gb|EBA18318.1| 30S ribosomal protein S13 [Roseobacter sp. SK209-2-6]
          Length = 122

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPTSAKAICEAVNIDETRRVNELSDAEVLSIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294101654|ref|YP_003553512.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261]
 gi|293616634|gb|ADE56788.1| 30S ribosomal protein S13 [Aminobacterium colombiense DSM 12261]
          Length = 125

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/121 (60%), Positives = 87/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +S  I     I P+ RV  L E E  +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLPTSHLILAATGINPDTRVKDLTEEEAQRIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V MNIKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  QEHYKVEGDLRREVTMNIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRKGPRRTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|260432470|ref|ZP_05786441.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416298|gb|EEX09557.1| 30S ribosomal protein S13 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 122

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKKICEAVGIDESRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|51894185|ref|YP_076876.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863]
 gi|81387945|sp|Q67JW8|RS13_SYMTH RecName: Full=30S ribosomal protein S13
 gi|51857874|dbj|BAD42032.1| 30S ribosomal protein S13 [Symbiobacterium thermophilum IAM 14863]
          Length = 124

 Score =  188 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG+  S++I  K  I P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEAALPYIYGIGWSLSREILKKTGIDPDTRVRDLTEEQVAKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDL+R V MNIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DHEYKVEGDLQREVQMNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|217967393|ref|YP_002352899.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
 gi|226712734|sp|B8E1F7|RS13_DICTD RecName: Full=30S ribosomal protein S13
 gi|217336492|gb|ACK42285.1| ribosomal protein S13 [Dictyoglomus turgidum DSM 6724]
          Length = 124

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V  AL YI+GIG  +S+ I     + P +RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPSNKKVEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT  NARTRK   K   A+
Sbjct: 61  ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRKGPRKTVGAK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|325294421|ref|YP_004280935.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325064869|gb|ADY72876.1| 30S ribosomal protein S13 [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 126

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K+V  +L YI+GIG K+   IC +  I PE+RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPDNKKVPYSLAYIYGIGIKTGFKICEEAGIDPEKRVKDLTEEEIAKIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLR+ +AMNIKRLM++GCYRG+RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  ETEYKVEGDLRKEIAMNIKRLMEIGCYRGIRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|237815630|ref|ZP_04594627.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A]
 gi|237788928|gb|EEP63139.1| 30S ribosomal protein S13 [Brucella abortus str. 2308 A]
          Length = 175

 Score =  188 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/121 (69%), Positives = 98/121 (80%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI+
Sbjct: 55  ARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAID 114

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K
Sbjct: 115 ADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGKK 174

Query: 122 R 122
           +
Sbjct: 175 K 175


>gi|302669988|ref|YP_003829948.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316]
 gi|302394461|gb|ADL33366.1| ribosomal protein S13 RpsM [Butyrivibrio proteoclasticus B316]
          Length = 157

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I     + P+ RV  L + EV +I + I
Sbjct: 36  MARIAGVDLPRDKRVEIGLTYIYGIGRTSSNKILEAAKVNPDTRVRDLTDDEVKKIAEII 95

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             DY VEGDLRR VAMNIKRL ++GC+RG+RHRRGLP RGQRT TNARTRK   +    +
Sbjct: 96  GNDYDVEGDLRREVAMNIKRLTEIGCFRGMRHRRGLPCRGQRTKTNARTRKGPKRTIANK 155

Query: 121 KR 122
           K+
Sbjct: 156 KK 157


>gi|325288602|ref|YP_004264783.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271]
 gi|324964003|gb|ADY54782.1| SSU ribosomal protein S13P [Syntrophobotulus glycolicus DSM 8271]
          Length = 122

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  AL YI+GIG   S+ I  K  + P+ RV  L + EV +IR+ I
Sbjct: 1   MARISGVDIPRDKRVEIALTYIYGIGNSQSKKILEKTQVSPDTRVRDLTDDEVARIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKEYMVEGDLRREVSLNIKRLMEIGCYRGMRHRRGLPVRGQRTKTNARTRKGPARAIARK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114767224|ref|ZP_01446089.1| 30S ribosomal protein S13 [Pelagibaca bermudensis HTCC2601]
 gi|114540634|gb|EAU43705.1| 30S ribosomal protein S13 [Roseovarius sp. HTCC2601]
          Length = 122

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+Q IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHTSAQQICEAVNIDATRRVNELSDTEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114567815|ref|YP_754969.1| 30S ribosomal protein S13 [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317307|sp|Q0AUK6|RS13_SYNWW RecName: Full=30S ribosomal protein S13
 gi|114338750|gb|ABI69598.1| SSU ribosomal protein S13P [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 122

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI GIG  SS+ I     I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEVSLTYIFGIGRSSSRKILTDAGINPDTRVKDLTEEEVSKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y VEGDLRR V M+IKRLMDLGCYRG+RHRRGLPVRGQ T TNARTRK   +    +
Sbjct: 61  EKEYHVEGDLRRQVNMDIKRLMDLGCYRGIRHRRGLPVRGQNTKTNARTRKGPKRTAGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|161611321|ref|YP_162274.2| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761082|ref|ZP_04759171.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|260752952|ref|YP_003225845.1| 30S ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|91207635|sp|Q5NQ42|RS13_ZYMMO RecName: Full=30S ribosomal protein S13
 gi|241374701|gb|EER64162.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|258552315|gb|ACV75261.1| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|283775271|gb|AAV89163.2| ribosomal protein S13 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 122

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  +++ I  KL I PERRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALTYIHGIGPTTAKKIVTKLGIAPERRVQDLSDNEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|328951211|ref|YP_004368546.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884]
 gi|328451535|gb|AEB12436.1| 30S ribosomal protein S13 [Marinithermus hydrothermalis DSM 14884]
          Length = 126

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   ++       I P  RV  L + EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVEIALTYIYGIGRTRAKQALEATGIDPSVRVKDLSDQEVVKLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTWKLEGELRAEVQANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319407403|emb|CBI81054.1| 30S ribosomal protein S13 [Bartonella sp. 1-1C]
          Length = 122

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  ++ I PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGISPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154253199|ref|YP_001414023.1| 30S ribosomal protein S13 [Parvibaculum lavamentivorans DS-1]
 gi|171769644|sp|A7HWT3|RS13_PARL1 RecName: Full=30S ribosomal protein S13
 gi|154157149|gb|ABS64366.1| ribosomal protein S13 [Parvibaculum lavamentivorans DS-1]
          Length = 122

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG   +++IC  + IP ERRV++L ++EVIQIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIHGIGNTKAKEICGTVGIPAERRVNELTDAEVIQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|190891377|ref|YP_001977919.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652]
 gi|226712781|sp|B3PWU3|RS13_RHIE6 RecName: Full=30S ribosomal protein S13
 gi|190696656|gb|ACE90741.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 652]
          Length = 122

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260426999|ref|ZP_05780978.1| 30S ribosomal protein S13 [Citreicella sp. SE45]
 gi|260421491|gb|EEX14742.1| 30S ribosomal protein S13 [Citreicella sp. SE45]
          Length = 122

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+Q IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHTSAQAICEAVNIEASRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255283708|ref|ZP_05348263.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469]
 gi|255265773|gb|EET58978.1| 30S ribosomal protein S13 [Bryantella formatexigens DSM 14469]
          Length = 122

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +IR  +
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRTSSNKILEAAGVNPDTRVRDLTDEEVSKIRDVM 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DEHYTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|144900906|emb|CAM77770.1| 30S ribosomal protein S13 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 125

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI GIG   + +IC KL+IP ERRV+QL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYITGIGRTKAAEICTKLSIPAERRVNQLTDDEVLKIREMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSDYTVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|326203870|ref|ZP_08193732.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782]
 gi|325985968|gb|EGD46802.1| 30S ribosomal protein S13 [Clostridium papyrosolvens DSM 2782]
          Length = 122

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S +I  K  + P+ RV  L + E+ +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRPKSNEILVKTGVSPDTRVRDLTDDEINKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR +A+NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DKEYKVEGDLRREIALNIKRLIEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPSKPVSGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|303230139|ref|ZP_07316908.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a]
 gi|303231267|ref|ZP_07318005.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514174|gb|EFL56178.1| 30S ribosomal protein S13 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515200|gb|EFL57173.1| 30S ribosomal protein S13 [Veillonella atypica ACS-134-V-Col7a]
          Length = 122

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLADEILAKTGINPDTRVRDLSEDEVAKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK   K    +
Sbjct: 61  DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|206900392|ref|YP_002250725.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
 gi|226712733|sp|B5YDW7|RS13_DICT6 RecName: Full=30S ribosomal protein S13
 gi|206739495|gb|ACI18553.1| ribosomal protein S13p/S18e [Dictyoglomus thermophilum H-6-12]
          Length = 124

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  +S+ I     + P +RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPSNKKIEIALTYIYGIGRTTSKKILQATGVDPNKRVKDLTEEEISKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLR+ VA NI+RL+++GCYRG+RH+RGLPVRGQRT  NARTRK   K   A+
Sbjct: 61  ENNYKVEGDLRQEVAANIRRLIEIGCYRGIRHKRGLPVRGQRTRCNARTRKGPRKTVGAK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|291544482|emb|CBL17591.1| SSU ribosomal protein S13P [Ruminococcus sp. 18P13]
          Length = 122

 Score =  187 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  ++  I  +  + P+ RV  L ES+V  +R  I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIYGIGRNTAATILKETGVNPDTRVKDLTESDVALLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DKHYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|288574687|ref|ZP_06393044.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570428|gb|EFC91985.1| ribosomal protein S13 [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 122

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI GIG  +S+ I     + P+ RV  L E E  ++R  I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIFGIGLTTSKKILATTGVNPDTRVKDLTEEETQKLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR V MNIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTRK   +    +
Sbjct: 61  QNGYTVEGDLRREVTMNIKRLMDIGCYRGIRHRQGLPLRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|268609567|ref|ZP_06143294.1| 30S ribosomal protein S13 [Ruminococcus flavefaciens FD-1]
          Length = 122

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG +++ +I     + P+ RV  L E +V ++R  I
Sbjct: 1   MARIAGVDLPKNKRIEIGLTYIYGIGRQTATNILANTGVNPDTRVKDLAEEDVAKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVALNIKRLVEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86357327|ref|YP_469219.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42]
 gi|123512263|sp|Q2K9J4|RS13_RHIEC RecName: Full=30S ribosomal protein S13
 gi|86281429|gb|ABC90492.1| 30S ribosomal protein S13 [Rhizobium etli CFN 42]
          Length = 122

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 91/122 (74%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|220928233|ref|YP_002505142.1| 30S ribosomal protein S13 [Clostridium cellulolyticum H10]
 gi|254811141|sp|B8I805|RS13_CLOCE RecName: Full=30S ribosomal protein S13
 gi|219998561|gb|ACL75162.1| ribosomal protein S13 [Clostridium cellulolyticum H10]
          Length = 122

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  + P+ RV  L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIYGIGRPKANEILVKTGVNPDTRVRDLTDDEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR +A+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DKEYKVEGDLRREIALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPSKPVSGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153009308|ref|YP_001370523.1| 30S ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188]
 gi|239832100|ref|ZP_04680429.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301]
 gi|166231914|sp|A6X0E0|RS13_OCHA4 RecName: Full=30S ribosomal protein S13
 gi|151561196|gb|ABS14694.1| ribosomal protein S13 [Ochrobactrum anthropi ATCC 49188]
 gi|239824367|gb|EEQ95935.1| 30S ribosomal protein S13 [Ochrobactrum intermedium LMG 3301]
          Length = 122

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114800366|ref|YP_761507.1| 30S ribosomal protein S13 [Hyphomonas neptunium ATCC 15444]
 gi|123027743|sp|Q0BYD6|RS13_HYPNA RecName: Full=30S ribosomal protein S13
 gi|114740540|gb|ABI78665.1| ribosomal protein S13 [Hyphomonas neptunium ATCC 15444]
          Length = 122

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   S++IC K+ + P RRV+QL ++EVI+IR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALRYIHGIGPSFSKEICEKVGVEPSRRVNQLTDAEVIKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR  +MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRKKLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163760822|ref|ZP_02167901.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
 gi|162281866|gb|EDQ32158.1| 30S ribosomal protein S13 [Hoeflea phototrophica DFL-43]
          Length = 126

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 5   MARIAGVNIPTNKRVIIALTYIHGIGNKFAAEIVEKVGIPLDRRVNQLSDAEVLQIRETI 64

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 65  DRDYQVEGDLRRENSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 124

Query: 121 KR 122
           K+
Sbjct: 125 KK 126


>gi|126728201|ref|ZP_01744017.1| 30S ribosomal protein S13 [Sagittula stellata E-37]
 gi|126711166|gb|EBA10216.1| 30S ribosomal protein S13 [Sagittula stellata E-37]
          Length = 122

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGHTSARAICEAVGIDATRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|310816988|ref|YP_003964952.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25]
 gi|308755723|gb|ADO43652.1| ribosomal protein S13p/S18e [Ketogulonicigenium vulgare Y25]
          Length = 122

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGPTSAEAICAAVGIEPTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V+MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVSMNIKRLMDLGAYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|56695423|ref|YP_165771.1| 30S ribosomal protein S13 [Ruegeria pomeroyi DSS-3]
 gi|81350693|sp|Q5LW34|RS13_SILPO RecName: Full=30S ribosomal protein S13
 gi|56677160|gb|AAV93826.1| ribosomal protein S13 [Ruegeria pomeroyi DSS-3]
          Length = 122

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++E++ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIDATRRVNELSDAEILAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYSVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222148388|ref|YP_002549345.1| 30S ribosomal protein S13 [Agrobacterium vitis S4]
 gi|254811121|sp|B9JVQ9|RS13_AGRVS RecName: Full=30S ribosomal protein S13
 gi|221735376|gb|ACM36339.1| 30S ribosomal protein S13 [Agrobacterium vitis S4]
          Length = 122

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ +  +RRVHQL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIMEKVGLSADRRVHQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|209548957|ref|YP_002280874.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|218674113|ref|ZP_03523782.1| 30S ribosomal protein S13 [Rhizobium etli GR56]
 gi|218679851|ref|ZP_03527748.1| 30S ribosomal protein S13 [Rhizobium etli CIAT 894]
 gi|226712782|sp|B5ZZ55|RS13_RHILW RecName: Full=30S ribosomal protein S13
 gi|209534713|gb|ACI54648.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 122

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149915867|ref|ZP_01904391.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b]
 gi|149810190|gb|EDM70036.1| ribosomal protein S13 [Roseobacter sp. AzwK-3b]
          Length = 122

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP +KRV  AL YI GIG  S++ IC  + I   RRV++L ++E++ +R+ +
Sbjct: 1   MARIAGVNIPTSKRVPIALTYITGIGHASAKAICEAVGIDQSRRVNELSDAELLAVREHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|116251562|ref|YP_767400.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. viciae 3841]
 gi|158706271|sp|Q1MIB9|RS13_RHIL3 RecName: Full=30S ribosomal protein S13
 gi|115256210|emb|CAK07291.1| putative 30S ribosomal protein S13 (BS14) [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 122

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGPKFAQEIVAKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255262793|ref|ZP_05342135.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62]
 gi|255105128|gb|EET47802.1| 30S ribosomal protein S13 [Thalassiobium sp. R2A62]
          Length = 122

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL Y+ GIG  S+Q IC  + I P RRV++L ++EV+++R+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYVTGIGTTSAQKICEAVGIDPTRRVNELSDAEVLKVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENYTVEGDLRREATMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163739471|ref|ZP_02146881.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
 gi|163740264|ref|ZP_02147658.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10]
 gi|161386122|gb|EDQ10497.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis 2.10]
 gi|161387224|gb|EDQ11583.1| 30S ribosomal protein S13 [Phaeobacter gallaeciensis BS107]
          Length = 122

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGTTSAEAICEAVGIDATRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83949765|ref|ZP_00958498.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM]
 gi|83837664|gb|EAP76960.1| 30S ribosomal protein S13 [Roseovarius nubinhibens ISM]
          Length = 122

 Score =  186 bits (474), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTHKRVPIALTYITGIGNTSAKAICEAVGIDLTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYMVEGDLRRETQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319789263|ref|YP_004150896.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
 gi|317113765|gb|ADU96255.1| 30S ribosomal protein S13 [Thermovibrio ammonificans HB-1]
          Length = 126

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K+V  +L YI+GIG KS   IC K  + PE+RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPDNKKVPYSLAYIYGIGIKSGFKICEKAGVDPEKRVKDLTEEEIAKIRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLR+ +AMNIKRL+++GCYRG+RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENEYKVEGDLRKEIAMNIKRLIEIGCYRGVRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319899077|ref|YP_004159170.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73]
 gi|319403041|emb|CBI76596.1| 30S ribosomal protein S13 [Bartonella clarridgeiae 73]
          Length = 122

 Score =  186 bits (474), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ + PERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGQKFAQEIVEKVGVSPERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291533604|emb|CBL06717.1| SSU ribosomal protein S13P [Megamonas hypermegale ART12/1]
          Length = 122

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 69/121 (57%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG K+SQDI     I P+ R   L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGLKTSQDILAATGINPDTRARDLTEDEVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR +++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK   K  + +
Sbjct: 61  DKNHLVEGDLRREISLNIKRLVEIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKTVMGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|256371240|ref|YP_003109064.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007824|gb|ACU53391.1| ribosomal protein S13 [Acidimicrobium ferrooxidans DSM 10331]
          Length = 125

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ +     + P+ RV  L + EV+ +R  I
Sbjct: 1   MARIAGVDIPREKRVEVALTYIYGIGPTLARQVLEATGVNPDTRVRNLTDEEVLALRSWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+ +VEGDLRR V  NIKR + +GCY+G+RHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQNLKVEGDLRREVDQNIKRKIQIGCYQGIRHRRGLPVRGQRTHTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|289523343|ref|ZP_06440197.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503035|gb|EFD24199.1| 30S ribosomal protein S13 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 127

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG  S++ I     I P+ RV  L E E+ ++++ I
Sbjct: 1   MARIAGIDLPRDKRVEIALTYIYGIGLPSAKKILASTGISPDTRVKDLTEDEINKLQREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  NIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK   +    +
Sbjct: 61  ENNHKVEGDLRREVNANIKRLIDIGCYRGLRHRLGLPVRGQRTRTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254294418|ref|YP_003060441.1| ribosomal protein S13 [Hirschia baltica ATCC 49814]
 gi|254042949|gb|ACT59744.1| ribosomal protein S13 [Hirschia baltica ATCC 49814]
          Length = 122

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +Q+IC+K+ I  ERRV  L ++EVIQ+R+AI
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIHGIGPVKAQEICDKVGIAAERRVQDLSDAEVIQVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|99080118|ref|YP_612272.1| 30S ribosomal protein S13 [Ruegeria sp. TM1040]
 gi|123379121|sp|Q1GK06|RS13_SILST RecName: Full=30S ribosomal protein S13
 gi|99036398|gb|ABF63010.1| SSU ribosomal protein S13P [Ruegeria sp. TM1040]
          Length = 122

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDATRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DATYTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|78043008|ref|YP_361093.1| 30S ribosomal protein S13 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|91207693|sp|Q3A9U1|RS13_CARHZ RecName: Full=30S ribosomal protein S13
 gi|77995123|gb|ABB14022.1| ribosomal protein S13 [Carboxydothermus hydrogenoformans Z-2901]
          Length = 123

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/123 (60%), Positives = 94/123 (76%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I  K  I P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGRPTANVILKKTGINPDTRVKDLTEEEVAKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           E++Y+VEG+LRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK   +  GV 
Sbjct: 61  EKNYKVEGELRREVALNIKRLIEIGCYRGIRHRKGLPVRGQRTRTNARTRKGPRRTVGVK 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|254474763|ref|ZP_05088149.1| ribosomal protein S13p/S18e [Ruegeria sp. R11]
 gi|214029006|gb|EEB69841.1| ribosomal protein S13p/S18e [Ruegeria sp. R11]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGSTSAEAICEAVGIDRTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|110634008|ref|YP_674216.1| 30S ribosomal protein S13 [Mesorhizobium sp. BNC1]
 gi|123162300|sp|Q11HS4|RS13_MESSB RecName: Full=30S ribosomal protein S13
 gi|110284992|gb|ABG63051.1| SSU ribosomal protein S13P [Chelativorans sp. BNC1]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I +K+ IP +RRVHQL ++EV+ IR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKLAREITSKVGIPDDRRVHQLTDAEVLAIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|328543380|ref|YP_004303489.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1]
 gi|326413125|gb|ADZ70188.1| 30S ribosomal protein S13 [Polymorphum gilvum SL003B-26A1]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I +K+ I PERRV+QL +SEV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKFAQEIIDKVNIAPERRVNQLSDSEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|85706697|ref|ZP_01037789.1| 30S ribosomal protein S13 [Roseovarius sp. 217]
 gi|85668755|gb|EAQ23624.1| 30S ribosomal protein S13 [Roseovarius sp. 217]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  L I   RRV++L ++E + +R+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHSSAKSICEALNIDTSRRVNELSDAEALALREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRRESQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86135791|ref|ZP_01054370.1| ribosomal protein S13 [Roseobacter sp. MED193]
 gi|85826665|gb|EAQ46861.1| ribosomal protein S13 [Roseobacter sp. MED193]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPAAKRVPIALTYITGIGNTSAATICEAVGIDVTRRVNELSDAEVLSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254486500|ref|ZP_05099705.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101]
 gi|214043369|gb|EEB84007.1| ribosomal protein S13p/S18e [Roseobacter sp. GAI101]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNSSAAQICEAVGIDTTRRINELSDAEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENFSVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|209964062|ref|YP_002296977.1| ribosomal protein S13 [Rhodospirillum centenum SW]
 gi|226712783|sp|B6IRS8|RS13_RHOCS RecName: Full=30S ribosomal protein S13
 gi|209957528|gb|ACI98164.1| ribosomal protein S13 [Rhodospirillum centenum SW]
          Length = 122

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++IC K+ IP ERRVHQL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTQKRVEIALQYIHGIGAAKAKEICGKVGIPVERRVHQLTDDEVLRIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR VAMNIKRLMD+ CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DSDYKVEGDLRREVAMNIKRLMDMACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|313903126|ref|ZP_07836520.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965]
 gi|317123072|ref|YP_004103075.1| 30S ribosomal protein S13P [Thermaerobacter marianensis DSM 12885]
 gi|313466628|gb|EFR62148.1| SSU ribosomal protein S13P [Thermaerobacter subterraneus DSM 13965]
 gi|315593052|gb|ADU52348.1| SSU ribosomal protein S13P [Thermaerobacter marianensis DSM 12885]
          Length = 126

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  + P+ RV  L E E+ ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEYALPYIYGIGLSRSREILAKAQVNPDTRVRDLTEDEINRLRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY+VEG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  ERDYKVEGELRSEVQRNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           KR
Sbjct: 121 KR 122


>gi|119950852|gb|ABM09763.1| ribosomal protein S13p/S18e [Arthrobacter aurescens TC1]
          Length = 164

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L ++E++Q+R  I
Sbjct: 40  MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 99

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 100 EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 159

Query: 121 KR 122
           K+
Sbjct: 160 KK 161


>gi|158424156|ref|YP_001525448.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571]
 gi|158331045|dbj|BAF88530.1| ribosomal protein S13 [Azorhizobium caulinodans ORS 571]
          Length = 157

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 86/121 (71%), Positives = 99/121 (81%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRVV AL YIHGIG K +++I  K+ I  ERRV+QL ++EV+QIR+ I+
Sbjct: 37  ARIAGVNIPTNKRVVIALQYIHGIGPKKAEEIVEKVGIAAERRVNQLTDAEVLQIRETID 96

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 97  RDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 156

Query: 122 R 122
           +
Sbjct: 157 K 157


>gi|331091642|ref|ZP_08340476.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330403399|gb|EGG82958.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+ +I  K  + P+ R   L + EV  I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRVSANNILEKAGVNPDTRCRDLTDEEVKVISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++YQVEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DENYQVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254719269|ref|ZP_05181080.1| 30S ribosomal protein S13 [Brucella sp. 83/13]
 gi|265984269|ref|ZP_06097004.1| ribosomal protein S13 [Brucella sp. 83/13]
 gi|306838020|ref|ZP_07470878.1| 30S ribosomal protein S13 [Brucella sp. NF 2653]
 gi|306840323|ref|ZP_07473095.1| 30S ribosomal protein S13 [Brucella sp. BO2]
 gi|306844114|ref|ZP_07476708.1| 30S ribosomal protein S13 [Brucella sp. BO1]
 gi|264662861|gb|EEZ33122.1| ribosomal protein S13 [Brucella sp. 83/13]
 gi|306275557|gb|EFM57289.1| 30S ribosomal protein S13 [Brucella sp. BO1]
 gi|306289722|gb|EFM60911.1| 30S ribosomal protein S13 [Brucella sp. BO2]
 gi|306406944|gb|EFM63165.1| 30S ribosomal protein S13 [Brucella sp. NF 2653]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|224370668|ref|YP_002604832.1| 30S ribosomal protein S13 [Desulfobacterium autotrophicum HRM2]
 gi|259494673|sp|C0Q9V0|RS13_DESAH RecName: Full=30S ribosomal protein S13
 gi|223693385|gb|ACN16668.1| RpsM [Desulfobacterium autotrophicum HRM2]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K V  AL YI+GIG   SQ I  K+ I P  +   L E +V  IR+ I
Sbjct: 1   MARIAGVDLPRNKHVEIALTYIYGIGRTRSQQILEKVGINPTLKSDALTEEQVNDIRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D++VEG+LR  ++MNIKRLMDLGCYRGLRHR+ LP RGQRT TNARTRK   +  V +
Sbjct: 61  DSDFKVEGELRTQISMNIKRLMDLGCYRGLRHRKSLPCRGQRTSTNARTRKGPKRAAVKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83941473|ref|ZP_00953935.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36]
 gi|83847293|gb|EAP85168.1| 30S ribosomal protein S13 [Sulfitobacter sp. EE-36]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/122 (63%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|167629493|ref|YP_001679992.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1]
 gi|226712743|sp|B0TC82|RS13_HELMI RecName: Full=30S ribosomal protein S13
 gi|167592233|gb|ABZ83981.1| 30S ribosomal protein s13 [Heliobacterium modesticaldum Ice1]
          Length = 123

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI GIG  ++  I  +  I P+ R   L + EV ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIAIALTYIFGIGRPTADKILAETGINPDTRTRDLTDEEVARLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR +++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKNVEVEGDLRREISLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227821777|ref|YP_002825747.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234]
 gi|254811161|sp|C3MB01|RS13_RHISN RecName: Full=30S ribosomal protein S13
 gi|227340776|gb|ACP24994.1| 30S ribosomal protein S13 [Sinorhizobium fredii NGR234]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K + +I  K+ IP +RRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAHEIVEKVGIPTDRRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319405876|emb|CBI79508.1| 30S ribosomal protein S13 [Bartonella sp. AR 15-3]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG K +Q+I  ++ IP ERRVH+L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIYGIGQKFAQEIIERVGIPLERRVHELSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQSYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|323703523|ref|ZP_08115169.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574]
 gi|323531514|gb|EGB21407.1| 30S ribosomal protein S13 [Desulfotomaculum nigrificans DSM 574]
          Length = 123

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/123 (59%), Positives = 93/123 (75%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR   AL YI+GIG  ++Q I  +  + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRTEIALTYIYGIGRPTAQKILAQTGVNPDTRVKDLTEEEVNKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++ +VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNIKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|147676680|ref|YP_001210895.1| 30S ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
 gi|189044284|sp|A5D5E5|RS13_PELTS RecName: Full=30S ribosomal protein S13
 gi|146272777|dbj|BAF58526.1| ribosomal protein S13 [Pelotomaculum thermopropionicum SI]
          Length = 123

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/123 (62%), Positives = 95/123 (77%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +SQ I  +  + P+ RV  L E E+ ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGKPTSQKILAQSGVNPDTRVRNLTEEEINKLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           E++Y+VEGDLRR VA+NIKRL+++GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  EKNYKVEGDLRREVALNIKRLIEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|251799616|ref|YP_003014347.1| ribosomal protein S13 [Paenibacillus sp. JDR-2]
 gi|247547242|gb|ACT04261.1| ribosomal protein S13 [Paenibacillus sp. JDR-2]
          Length = 122

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI GIG  +SQ I     + P+ RV  L E E+ ++R+AI
Sbjct: 1   MARIAGVDIPRDKRVEIALTYIFGIGKTTSQKILASTGVNPDTRVRDLTEDELAKLREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218885210|ref|YP_002434531.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226712732|sp|B8DNK6|RS13_DESVM RecName: Full=30S ribosomal protein S13
 gi|218756164|gb|ACL07063.1| ribosomal protein S13 [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +   R +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTALQILDVTGVDWSRNIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQNHKVEGDLRREISSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|150396229|ref|YP_001326696.1| 30S ribosomal protein S13 [Sinorhizobium medicae WSM419]
 gi|166231926|sp|A6U881|RS13_SINMW RecName: Full=30S ribosomal protein S13
 gi|150027744|gb|ABR59861.1| ribosomal protein S13 [Sinorhizobium medicae WSM419]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/122 (73%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIVEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238018648|ref|ZP_04599074.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748]
 gi|269798525|ref|YP_003312425.1| ribosomal protein S13 [Veillonella parvula DSM 2008]
 gi|282849889|ref|ZP_06259272.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745]
 gi|294792819|ref|ZP_06757966.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27]
 gi|294794573|ref|ZP_06759709.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44]
 gi|237865119|gb|EEP66409.1| hypothetical protein VEIDISOL_00483 [Veillonella dispar ATCC 17748]
 gi|269095154|gb|ACZ25145.1| ribosomal protein S13 [Veillonella parvula DSM 2008]
 gi|282580326|gb|EFB85726.1| 30S ribosomal protein S13 [Veillonella parvula ATCC 17745]
 gi|294454903|gb|EFG23276.1| 30S ribosomal protein S13 [Veillonella sp. 3_1_44]
 gi|294456718|gb|EFG25081.1| 30S ribosomal protein S13 [Veillonella sp. 6_1_27]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLASEIIAKTGINPDTRVRDLSEDEVAKIRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK   K    +
Sbjct: 61  DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302344332|ref|YP_003808861.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075]
 gi|301640945|gb|ADK86267.1| 30S ribosomal protein S13 [Desulfarculus baarsii DSM 2075]
          Length = 123

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  +S+ I +   + P+ +   L   EV +IRQ I
Sbjct: 1   MARIAGIDLPRNKRIEVALTYIYGIGPSTSKRILDAAGVNPDTKSDALNSEEVNRIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   +  V +
Sbjct: 61  DEAYKVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSRAVVGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|121534657|ref|ZP_01666478.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1]
 gi|121306677|gb|EAX47598.1| ribosomal protein S13 [Thermosinus carboxydivorans Nor1]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I     I P+ RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTLSREILAATKINPDTRVRDLTEEEISKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR   +NIKRL+++GCYRG RHR GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKNYKVEGDLRREEQLNIKRLIEIGCYRGKRHRAGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|17987062|ref|NP_539696.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|23502088|ref|NP_698215.1| 30S ribosomal protein S13 [Brucella suis 1330]
 gi|62290122|ref|YP_221915.1| 30S ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941]
 gi|82700045|ref|YP_414619.1| 30S ribosomal protein S13 [Brucella melitensis biovar Abortus 2308]
 gi|148560452|ref|YP_001259131.1| 30S ribosomal protein S13 [Brucella ovis ATCC 25840]
 gi|161619166|ref|YP_001593053.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365]
 gi|163843476|ref|YP_001627880.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445]
 gi|189024360|ref|YP_001935128.1| Ribosomal protein S13 [Brucella abortus S19]
 gi|225627682|ref|ZP_03785719.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo]
 gi|225852707|ref|YP_002732940.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457]
 gi|254689431|ref|ZP_05152685.1| 30S ribosomal protein S13 [Brucella abortus bv. 6 str. 870]
 gi|254693916|ref|ZP_05155744.1| 30S ribosomal protein S13 [Brucella abortus bv. 3 str. Tulya]
 gi|254697566|ref|ZP_05159394.1| 30S ribosomal protein S13 [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701952|ref|ZP_05163780.1| 30S ribosomal protein S13 [Brucella suis bv. 5 str. 513]
 gi|254704496|ref|ZP_05166324.1| 30S ribosomal protein S13 [Brucella suis bv. 3 str. 686]
 gi|254706608|ref|ZP_05168436.1| 30S ribosomal protein S13 [Brucella pinnipedialis M163/99/10]
 gi|254710282|ref|ZP_05172093.1| 30S ribosomal protein S13 [Brucella pinnipedialis B2/94]
 gi|254730460|ref|ZP_05189038.1| 30S ribosomal protein S13 [Brucella abortus bv. 4 str. 292]
 gi|256031776|ref|ZP_05445390.1| 30S ribosomal protein S13 [Brucella pinnipedialis M292/94/1]
 gi|256044861|ref|ZP_05447765.1| 30S ribosomal protein S13 [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061291|ref|ZP_05451441.1| 30S ribosomal protein S13 [Brucella neotomae 5K33]
 gi|256113765|ref|ZP_05454569.1| 30S ribosomal protein S13 [Brucella melitensis bv. 3 str. Ether]
 gi|256159946|ref|ZP_05457664.1| 30S ribosomal protein S13 [Brucella ceti M490/95/1]
 gi|256255177|ref|ZP_05460713.1| 30S ribosomal protein S13 [Brucella ceti B1/94]
 gi|256257677|ref|ZP_05463213.1| 30S ribosomal protein S13 [Brucella abortus bv. 9 str. C68]
 gi|256263802|ref|ZP_05466334.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9]
 gi|256369635|ref|YP_003107145.1| 30S ribosomal protein S13 [Brucella microti CCM 4915]
 gi|260168910|ref|ZP_05755721.1| 30S ribosomal protein S13 [Brucella sp. F5/99]
 gi|260546670|ref|ZP_05822409.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038]
 gi|260565537|ref|ZP_05836021.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|260566260|ref|ZP_05836730.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40]
 gi|260754954|ref|ZP_05867302.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870]
 gi|260758170|ref|ZP_05870518.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292]
 gi|260761996|ref|ZP_05874339.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883963|ref|ZP_05895577.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68]
 gi|261214208|ref|ZP_05928489.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya]
 gi|261222373|ref|ZP_05936654.1| SSU ribosomal protein S13P [Brucella ceti B1/94]
 gi|261314067|ref|ZP_05953264.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10]
 gi|261317845|ref|ZP_05957042.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94]
 gi|261325298|ref|ZP_05964495.1| SSU ribosomal protein S13P [Brucella neotomae 5K33]
 gi|261752520|ref|ZP_05996229.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513]
 gi|261755179|ref|ZP_05998888.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686]
 gi|261758403|ref|ZP_06002112.1| SSU ribosomal protein S13P [Brucella sp. F5/99]
 gi|265988874|ref|ZP_06101431.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1]
 gi|265991288|ref|ZP_06103845.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995125|ref|ZP_06107682.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether]
 gi|265998338|ref|ZP_06110895.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1]
 gi|294852546|ref|ZP_06793219.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026]
 gi|297248517|ref|ZP_06932235.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196]
 gi|54039348|sp|P66382|RS13_BRUSU RecName: Full=30S ribosomal protein S13
 gi|54042120|sp|P66381|RS13_BRUME RecName: Full=30S ribosomal protein S13
 gi|75496693|sp|Q57CT0|RS13_BRUAB RecName: Full=30S ribosomal protein S13
 gi|91207690|sp|Q2YRT8|RS13_BRUA2 RecName: Full=30S ribosomal protein S13
 gi|158706216|sp|A5VQY4|RS13_BRUO2 RecName: Full=30S ribosomal protein S13
 gi|189040492|sp|A9M5M7|RS13_BRUC2 RecName: Full=30S ribosomal protein S13
 gi|189040493|sp|B0CH09|RS13_BRUSI RecName: Full=30S ribosomal protein S13
 gi|226712703|sp|B2S657|RS13_BRUA1 RecName: Full=30S ribosomal protein S13
 gi|254811133|sp|C0RJH8|RS13_BRUMB RecName: Full=30S ribosomal protein S13
 gi|17982719|gb|AAL51960.1| ssu ribosomal protein s13p [Brucella melitensis bv. 1 str. 16M]
 gi|23348047|gb|AAN30130.1| ribosomal protein S13 [Brucella suis 1330]
 gi|62196254|gb|AAX74554.1| RpsM, ribosomal protein S13 [Brucella abortus bv. 1 str. 9-941]
 gi|82616146|emb|CAJ11189.1| Ribosomal protein S13 [Brucella melitensis biovar Abortus 2308]
 gi|148371709|gb|ABQ61688.1| ribosomal protein S13 [Brucella ovis ATCC 25840]
 gi|161335977|gb|ABX62282.1| 30S ribosomal protein S13 [Brucella canis ATCC 23365]
 gi|163674199|gb|ABY38310.1| 30S ribosomal protein S13 [Brucella suis ATCC 23445]
 gi|189019932|gb|ACD72654.1| Ribosomal protein S13 [Brucella abortus S19]
 gi|225617687|gb|EEH14732.1| 30S ribosomal protein S13 [Brucella ceti str. Cudo]
 gi|225641072|gb|ACO00986.1| 30S ribosomal protein S13 [Brucella melitensis ATCC 23457]
 gi|255999797|gb|ACU48196.1| 30S ribosomal protein S13 [Brucella microti CCM 4915]
 gi|260095720|gb|EEW79597.1| SSU ribosomal protein S13P [Brucella abortus NCTC 8038]
 gi|260151605|gb|EEW86699.1| ribosomal protein S13 [Brucella melitensis bv. 1 str. 16M]
 gi|260155778|gb|EEW90858.1| ribosomal protein S13 [Brucella suis bv. 4 str. 40]
 gi|260668488|gb|EEX55428.1| SSU ribosomal protein S13P [Brucella abortus bv. 4 str. 292]
 gi|260672428|gb|EEX59249.1| SSU ribosomal protein S13P [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675062|gb|EEX61883.1| SSU ribosomal protein S13P [Brucella abortus bv. 6 str. 870]
 gi|260873491|gb|EEX80560.1| SSU ribosomal protein S13P [Brucella abortus bv. 9 str. C68]
 gi|260915815|gb|EEX82676.1| SSU ribosomal protein S13P [Brucella abortus bv. 3 str. Tulya]
 gi|260920957|gb|EEX87610.1| SSU ribosomal protein S13P [Brucella ceti B1/94]
 gi|261297068|gb|EEY00565.1| SSU ribosomal protein S13P [Brucella pinnipedialis B2/94]
 gi|261301278|gb|EEY04775.1| SSU ribosomal protein S13P [Brucella neotomae 5K33]
 gi|261303093|gb|EEY06590.1| SSU ribosomal protein S13P [Brucella pinnipedialis M163/99/10]
 gi|261738387|gb|EEY26383.1| SSU ribosomal protein S13P [Brucella sp. F5/99]
 gi|261742273|gb|EEY30199.1| SSU ribosomal protein S13P [Brucella suis bv. 5 str. 513]
 gi|261744932|gb|EEY32858.1| SSU ribosomal protein S13P [Brucella suis bv. 3 str. 686]
 gi|262552806|gb|EEZ08796.1| SSU ribosomal protein S13P [Brucella ceti M490/95/1]
 gi|262766238|gb|EEZ12027.1| SSU ribosomal protein S13P [Brucella melitensis bv. 3 str. Ether]
 gi|263002072|gb|EEZ14647.1| SSU ribosomal protein S13P [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093930|gb|EEZ17864.1| ribosomal protein S13 [Brucella melitensis bv. 2 str. 63/9]
 gi|264661071|gb|EEZ31332.1| SSU ribosomal protein S13P [Brucella pinnipedialis M292/94/1]
 gi|294821135|gb|EFG38134.1| 30S ribosomal protein S13 [Brucella sp. NVSL 07-0026]
 gi|297175686|gb|EFH35033.1| 30S ribosomal protein S13 [Brucella abortus bv. 5 str. B3196]
 gi|326409232|gb|ADZ66297.1| Ribosomal protein S13 [Brucella melitensis M28]
 gi|326538940|gb|ADZ87155.1| 30S ribosomal protein S13 [Brucella melitensis M5-90]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83858544|ref|ZP_00952066.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633]
 gi|83853367|gb|EAP91219.1| 30S ribosomal protein S13 [Oceanicaulis alexandrii HTCC2633]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   + +IC K+ IP E+RV QL ++E++QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIHGIGPAMAAEICEKVGIPAEKRVSQLTDAEILQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR VA+N+KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYTVEGDLRREVAVNVKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319408743|emb|CBI82400.1| 30S ribosomal protein S13 [Bartonella schoenbuchensis R1]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I  K+ IP ERRVH+L+++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGRKFAQEIVEKVGIPSERRVHELLDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89053106|ref|YP_508557.1| 30S ribosomal protein S13 [Jannaschia sp. CCS1]
 gi|122499557|sp|Q28UT0|RS13_JANSC RecName: Full=30S ribosomal protein S13
 gi|88862655|gb|ABD53532.1| SSU ribosomal protein S13P [Jannaschia sp. CCS1]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL Y+ GIG  S+  IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYVTGIGHTSAAAICEAVGIDVTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYAVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|259416113|ref|ZP_05740033.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B]
 gi|259347552|gb|EEW59329.1| 30S ribosomal protein S13 [Silicibacter sp. TrichCH4B]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPASAKAICEAVNIDVTRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DATFTVEGDLRREVQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254780239|ref|YP_003064652.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254039916|gb|ACT56712.1| 30S ribosomal protein S13 [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI
Sbjct: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR
Sbjct: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120

Query: 121 KR 122
           KR
Sbjct: 121 KR 122


>gi|162139937|ref|YP_001261831.2| 30S ribosomal protein S13 [Sphingomonas wittichii RW1]
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++I  KL I P+RRV  L + EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|187933579|ref|YP_001884499.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B]
 gi|188589031|ref|YP_001919698.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251779722|ref|ZP_04822642.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|226712717|sp|B2UYD6|RS13_CLOBA RecName: Full=30S ribosomal protein S13
 gi|226712718|sp|B2TIK1|RS13_CLOBB RecName: Full=30S ribosomal protein S13
 gi|187721732|gb|ACD22953.1| 30S ribosomal protein S13 [Clostridium botulinum B str. Eklund 17B]
 gi|188499312|gb|ACD52448.1| 30S ribosomal protein S13 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243084037|gb|EES49927.1| 30S ribosomal protein S13 [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 122

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +SQ I +   I P+ RV  L E EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLSTSQKILSTTGISPDARVKDLSEDEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTMANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|241204187|ref|YP_002975283.1| 30S ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858077|gb|ACS55744.1| ribosomal protein S13 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 122

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 92/122 (75%), Positives = 103/122 (84%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGSKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|292669834|ref|ZP_06603260.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541]
 gi|292648631|gb|EFF66603.1| 30S ribosomal protein S13 [Selenomonas noxia ATCC 43541]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  ++Q I     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEISLTYIYGIGLTTAQKILAIADVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154505144|ref|ZP_02041882.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149]
 gi|153794623|gb|EDN77043.1| hypothetical protein RUMGNA_02657 [Ruminococcus gnavus ATCC 29149]
          Length = 159

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + +V +I + I
Sbjct: 38  MARIAGVDLPRDKRVEIGLTYIYGIGKTSAIRILADAGVDPDTRVRDLTQDDVKKISEVI 97

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 98  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 157

Query: 121 KR 122
           K+
Sbjct: 158 KK 159


>gi|94985943|ref|YP_605307.1| 30S ribosomal protein S13 [Deinococcus geothermalis DSM 11300]
 gi|158706226|sp|Q1IX96|RS13_DEIGD RecName: Full=30S ribosomal protein S13
 gi|94556224|gb|ABF46138.1| ribosomal protein S13 [Deinococcus geothermalis DSM 11300]
          Length = 126

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   ++++  +  + P+ RV  L E+E   +R+AI
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGLTRAKEVLARTGVNPDTRVKNLSETEQSALREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|197117347|ref|YP_002137774.1| 30S ribosomal protein S13 [Geobacter bemidjiensis Bem]
 gi|253701898|ref|YP_003023087.1| 30S ribosomal protein S13 [Geobacter sp. M21]
 gi|226712741|sp|B5EFS4|RS13_GEOBB RecName: Full=30S ribosomal protein S13
 gi|259494680|sp|C6E4N3|RS13_GEOSM RecName: Full=30S ribosomal protein S13
 gi|197086707|gb|ACH37978.1| ribosomal protein S13 [Geobacter bemidjiensis Bem]
 gi|251776748|gb|ACT19329.1| ribosomal protein S13 [Geobacter sp. M21]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ+I     +    R   L E+EV +IR+ I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTAAGVDMNTRCDNLTEAEVTKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   +    +
Sbjct: 61  DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|13470573|ref|NP_102142.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099]
 gi|260468532|ref|ZP_05813699.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075]
 gi|32363384|sp|Q98N35|RS13_RHILO RecName: Full=30S ribosomal protein S13
 gi|14021315|dbj|BAB47928.1| 30S ribosomal protein S13 [Mesorhizobium loti MAFF303099]
 gi|259028688|gb|EEW29997.1| ribosomal protein S13 [Mesorhizobium opportunistum WSM2075]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I +K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGKKFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|116749014|ref|YP_845701.1| 30S ribosomal protein S13 [Syntrophobacter fumaroxidans MPOB]
 gi|158706289|sp|A0LIL4|RS13_SYNFM RecName: Full=30S ribosomal protein S13
 gi|116698078|gb|ABK17266.1| SSU ribosomal protein S13P [Syntrophobacter fumaroxidans MPOB]
          Length = 124

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  ++Q I  +  I    +   L E+++  IR  I
Sbjct: 1   MARIAGIDLPKNKRIEIALTYIYGIGRPTAQKILEQANIDGNTKSDDLTENQINSIRHVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLR  V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   +  + +
Sbjct: 61  DSHYKVEGDLRTEVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRSVMGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|125975410|ref|YP_001039320.1| 30S ribosomal protein S13 [Clostridium thermocellum ATCC 27405]
 gi|256005303|ref|ZP_05430269.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
 gi|281419372|ref|ZP_06250387.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
 gi|158706224|sp|A3DJJ8|RS13_CLOTH RecName: Full=30S ribosomal protein S13
 gi|125715635|gb|ABN54127.1| SSU ribosomal protein S13P [Clostridium thermocellum ATCC 27405]
 gi|255990739|gb|EEU00855.1| ribosomal protein S13 [Clostridium thermocellum DSM 2360]
 gi|281406992|gb|EFB37255.1| 30S ribosomal protein S13 [Clostridium thermocellum JW20]
 gi|316939526|gb|ADU73560.1| 30S ribosomal protein S13 [Clostridium thermocellum DSM 1313]
          Length = 123

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S +I  K  I P+ RV  L + E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRTLSNEILRKTGINPDTRVKDLTDEEISKLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR +A+NIKRLM++GCYRG RHR GLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKEYKVEGDLRREIALNIKRLMEIGCYRGRRHRAGLPVRGQRTKTNARTRKGPKKTVGVQ 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|90106929|gb|ABD88966.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB18]
          Length = 148

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 81/121 (66%), Positives = 96/121 (79%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ I  ++RV+QL + EV+QIR+ I+
Sbjct: 28  ARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVID 87

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 88  RDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGKK 147

Query: 122 R 122
           +
Sbjct: 148 K 148


>gi|303328071|ref|ZP_07358510.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3]
 gi|302861897|gb|EFL84832.1| 30S ribosomal protein S13 [Desulfovibrio sp. 3_1_syn3]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTALKILDSTGVNWERSIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQNFKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319783342|ref|YP_004142818.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169230|gb|ADV12768.1| 30S ribosomal protein S13 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +Q+I +K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGKRFAQEIVDKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163868628|ref|YP_001609837.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476]
 gi|189040491|sp|A9IVZ8|RS13_BART1 RecName: Full=30S ribosomal protein S13
 gi|161018284|emb|CAK01842.1| 30S ribosomal protein S13 [Bartonella tribocorum CIP 105476]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ IP  RRVH+L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITEKVGIPTGRRVHELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148499439|gb|ABQ67693.1| SSU ribosomal protein S13P [Sphingomonas wittichii RW1]
          Length = 137

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 82/121 (67%), Positives = 93/121 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  AL YIHGIG   +++I  KL I P+RRV  L + EV+QIR+AI+
Sbjct: 17  ARIAGVNIPTNKRVEIALTYIHGIGPAKAKEITAKLGIEPQRRVQDLSDQEVLQIREAID 76

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             Y VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +K
Sbjct: 77  AGYTVEGDLRRQVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGKK 136

Query: 122 R 122
           +
Sbjct: 137 K 137


>gi|46579737|ref|YP_010545.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602786|ref|YP_967186.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris DP4]
 gi|81566848|sp|Q72CF7|RS13_DESVH RecName: Full=30S ribosomal protein S13
 gi|158706227|sp|A1VE93|RS13_DESVV RecName: Full=30S ribosomal protein S13
 gi|46449152|gb|AAS95804.1| ribosomal protein S13 [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563015|gb|ABM28759.1| SSU ribosomal protein S13P [Desulfovibrio vulgaris DP4]
 gi|311233528|gb|ADP86382.1| 30S ribosomal protein S13 [Desulfovibrio vulgaris RCH1]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +   R V  L   EV +IR+ I
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRATALQILDATGVNWTRNVDDLNADEVNEIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR ++ NIKRLMD+GCYRGLRHRRGLPVRGQRTHTNARTRK   +G V +
Sbjct: 61  EQNHKVEGDLRREISANIKRLMDIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRRGTVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159042863|ref|YP_001531657.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12]
 gi|157910623|gb|ABV92056.1| 30S ribosomal protein S13 [Dinoroseobacter shibae DFL 12]
          Length = 147

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/121 (61%), Positives = 89/121 (73%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVN+P  KR   AL YI GIG  S+Q IC  + I   RR+++L ++E++ IR+ I+
Sbjct: 27  ARIAGVNLPTGKRTPIALTYITGIGLSSAQAICEAVGIEESRRLNELSDAEILAIREHID 86

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K
Sbjct: 87  ANYTVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 146

Query: 122 R 122
           +
Sbjct: 147 K 147


>gi|254470460|ref|ZP_05083864.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062]
 gi|211960771|gb|EEA95967.1| ribosomal protein S13p/S18e [Pseudovibrio sp. JE062]
          Length = 122

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV AL YIHGIG K +Q+I +K+ I  ERRV++L ++EV++IR+AI
Sbjct: 1   MARIAGVNLPTNKRVVIALQYIHGIGAKFAQEITDKVGIAAERRVNELSDAEVLKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEYTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|163733785|ref|ZP_02141227.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149]
 gi|161392896|gb|EDQ17223.1| 30S ribosomal protein S13 [Roseobacter litoralis Och 149]
          Length = 145

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/121 (63%), Positives = 93/121 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP AKRV  AL YI GIG  S++ IC  + I P RRV++L ++EV+ +R+ I+
Sbjct: 25  ARIAGVNIPTAKRVPIALTYITGIGNNSAKQICEAVGIDPSRRVNELSDAEVLAVREHID 84

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K
Sbjct: 85  ANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 144

Query: 122 R 122
           +
Sbjct: 145 K 145


>gi|134298118|ref|YP_001111614.1| 30S ribosomal protein S13 [Desulfotomaculum reducens MI-1]
 gi|172044236|sp|A4J136|RS13_DESRM RecName: Full=30S ribosomal protein S13
 gi|134050818|gb|ABO48789.1| SSU ribosomal protein S13P [Desulfotomaculum reducens MI-1]
          Length = 123

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR   AL YI+GIG  ++Q I  +  + P+ R+  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRAEIALTYIYGIGKPTAQKILAQTGVNPDTRIKDLTEEEVNKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   K   AR
Sbjct: 61  DKNTKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPKKTVGAR 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|89070530|ref|ZP_01157819.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516]
 gi|89043837|gb|EAR50035.1| 30S ribosomal protein S13 [Oceanicola granulosus HTCC2516]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGPSSAKAICEAVNIDQTRRVNELSDAEVLSIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR   MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRRETQMNIKRLMDLGSYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225026388|ref|ZP_03715580.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353]
 gi|224956277|gb|EEG37486.1| hypothetical protein EUBHAL_00637 [Eubacterium hallii DSM 3353]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSADQILKAADVNPDTRVRDLTDDEVRRLSDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             DY VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  NADYTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83591250|ref|YP_431259.1| 30S ribosomal protein S13 [Moorella thermoacetica ATCC 39073]
 gi|123523769|sp|Q2RFS3|RS13_MOOTA RecName: Full=30S ribosomal protein S13
 gi|83574164|gb|ABC20716.1| SSU ribosomal protein S13P [Moorella thermoacetica ATCC 39073]
          Length = 123

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/123 (60%), Positives = 90/123 (73%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S  I     + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYIYGIGRPKSNMILAATGVNPDTRVRDLTEDEVNRLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++  VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK   +  GV 
Sbjct: 61  DKNVVVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|15965131|ref|NP_385484.1| 30S ribosomal protein S13 [Sinorhizobium meliloti 1021]
 gi|307314381|ref|ZP_07593987.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C]
 gi|307322093|ref|ZP_07601469.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83]
 gi|32363377|sp|Q925X7|RS13_RHIME RecName: Full=30S ribosomal protein S13
 gi|15074311|emb|CAC45957.1| Probable 30S ribosomal protein S13 [Sinorhizobium meliloti 1021]
 gi|16588800|gb|AAL26899.1| ribosomal protein S13 [Sinorhizobium meliloti]
 gi|306892275|gb|EFN23085.1| 30S ribosomal protein S13 [Sinorhizobium meliloti AK83]
 gi|306899079|gb|EFN29721.1| 30S ribosomal protein S13 [Sinorhizobium meliloti BL225C]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 90/122 (73%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALTYIHGIGTKFAQEIIEKVGIPAERRVHQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|320451276|ref|YP_004203372.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01]
 gi|320151445|gb|ADW22823.1| 30S ribosomal protein S13 [Thermus scotoductus SA-01]
          Length = 126

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+G+G   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGVGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|304438386|ref|ZP_07398327.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368752|gb|EFM22436.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG  +++ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAADVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260655359|ref|ZP_05860847.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1]
 gi|260629807|gb|EEX48001.1| 30S ribosomal protein S13 [Jonquetella anthropi E3_33 E1]
          Length = 123

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 83/121 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S+ I     + P+ RV  L E E  ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGVATSRKILETTGVNPDTRVKDLTEEEEQKLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             ++ VEGDLRR   MNIKRL+D+GCYRGLRH++GLPVRGQRT TNART K   +    +
Sbjct: 61  VNNHTVEGDLRRERTMNIKRLVDIGCYRGLRHKQGLPVRGQRTKTNARTCKGPRRTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|114778800|ref|ZP_01453607.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
 gi|114550931|gb|EAU53495.1| 30S ribosomal protein S13 [Mariprofundus ferrooxydans PV-1]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG  SS+ I     I    RV  L + EV +IR  I
Sbjct: 1   MARIAGVNIPTQKRVEIALTYIYGIGHTSSKAILASAGIDVNTRVKDLSDGEVDKIRSLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V M+IKRL DLGCYRGLRHR+GLPVRGQR+ TNARTRK   +    +
Sbjct: 61  DADYAVEGDLRREVTMSIKRLTDLGCYRGLRHRKGLPVRGQRSKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|78221870|ref|YP_383617.1| 30S ribosomal protein S13 [Geobacter metallireducens GS-15]
 gi|91207703|sp|Q39XY2|RS13_GEOMG RecName: Full=30S ribosomal protein S13
 gi|78193125|gb|ABB30892.1| SSU ribosomal protein S13P [Geobacter metallireducens GS-15]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  ++Q I  +  +  + R   L E+EV +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRTTAQKILAESGVSVDTRTDSLTEAEVAKIREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKNIKVEGDLRRDVSMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|303240947|ref|ZP_07327458.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2]
 gi|302591533|gb|EFL61270.1| 30S ribosomal protein S13 [Acetivibrio cellulolyticus CD2]
          Length = 123

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S  I  K  + P+ RV  L + E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRTLSNQILEKTGVNPDTRVRDLTDDEISKLRECI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR V++NIKRLM++GCYRG RHR GLP RGQRT TNARTRK   +  G  
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLMEVGCYRGRRHRMGLPCRGQRTKTNARTRKGPKRTVGAQ 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|322418388|ref|YP_004197611.1| 30S ribosomal protein S13 [Geobacter sp. M18]
 gi|320124775|gb|ADW12335.1| 30S ribosomal protein S13 [Geobacter sp. M18]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ+I     +    R   L E+EV +IR+ I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRSLSQEILTATGVDMNTRCDNLTEAEVAKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR ++M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   +    +
Sbjct: 61  DKNVKVEGDLRRDISMSIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222056682|ref|YP_002539044.1| ribosomal protein S13 [Geobacter sp. FRC-32]
 gi|254811149|sp|B9M6F5|RS13_GEOSF RecName: Full=30S ribosomal protein S13
 gi|221565971|gb|ACM21943.1| ribosomal protein S13 [Geobacter sp. FRC-32]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  +SQ I  +  +    R   L ESEV +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRSTSQKILAEAGVDANTRSDNLTESEVAKIRENI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK   +    +
Sbjct: 61  DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294675881|ref|YP_003576496.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003]
 gi|294474701|gb|ADE84089.1| 30S ribosomal protein S13 [Rhodobacter capsulatus SB 1003]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   ++ I   + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALQYIHGIGPMFAKQIVEAVGIAEARRVNELTDAEVLAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAHFTVEGDLRREVSMNIKRLMDLGCYRGLRHRKNLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291296966|ref|YP_003508364.1| 30S ribosomal protein S13 [Meiothermus ruber DSM 1279]
 gi|290471925|gb|ADD29344.1| ribosomal protein S13 [Meiothermus ruber DSM 1279]
          Length = 126

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IPR KRV  AL YI+G+G   +++      + P  RV  L E+EV ++R+ +
Sbjct: 1   MARISGVEIPRNKRVDVALTYIYGVGPARAKEALAATNVDPATRVKDLTEAEVARLREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTYKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149202866|ref|ZP_01879837.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035]
 gi|149143412|gb|EDM31448.1| 30S ribosomal protein S13 [Roseovarius sp. TM1035]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  L+I   RRV++L ++E + +R+ I
Sbjct: 1   MARIAGVNIPTNKRVPIALTYITGIGHASAKSICEALSIDVSRRVNELSDAEALALREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|162139378|ref|YP_914590.2| 30S ribosomal protein S13 [Paracoccus denitrificans PD1222]
 gi|158706363|sp|A1B050|RS13_PARDP RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR   MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|146278546|ref|YP_001168705.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17025]
 gi|166231918|sp|A4WVI6|RS13_RHOS5 RecName: Full=30S ribosomal protein S13
 gi|145556787|gb|ABP71400.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17025]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YIHGIG   ++ IC+ + I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYIHGIGNHVAEQICDAVGIDRARRVNQLSDAEVLAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238928131|ref|ZP_04659891.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531]
 gi|238884091|gb|EEQ47729.1| ribosomal protein S13 [Selenomonas flueggei ATCC 43531]
          Length = 122

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG  +++ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLTTAKKLLAAANVNPDTRTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR + MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREIQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254714279|ref|ZP_05176090.1| 30S ribosomal protein S13 [Brucella ceti M644/93/1]
 gi|254717716|ref|ZP_05179527.1| 30S ribosomal protein S13 [Brucella ceti M13/05/1]
 gi|261219559|ref|ZP_05933840.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1]
 gi|261322054|ref|ZP_05961251.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1]
 gi|260924648|gb|EEX91216.1| SSU ribosomal protein S13P [Brucella ceti M13/05/1]
 gi|261294744|gb|EEX98240.1| SSU ribosomal protein S13P [Brucella ceti M644/93/1]
          Length = 122

 Score =  183 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K +++I  K+ I  +RRV+QL ++EV++IR+AI
Sbjct: 1   MARIAGVNIPTNKRVNIALQYIHGIGPKFAREIVTKVGIADDRRVNQLSDAEVLRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYQVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|313893169|ref|ZP_07826746.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442522|gb|EFR60937.1| 30S ribosomal protein S13 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 122

 Score =  183 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   + +I  K  I P+ RV  L E EV++IR+ +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGPTLAAEIIAKTGINPDTRVRDLSEDEVVKIRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK   K    +
Sbjct: 61  DAEYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300742032|ref|ZP_07072053.1| 30S ribosomal protein S13 [Rothia dentocariosa M567]
 gi|311111946|ref|YP_003983168.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931]
 gi|300381217|gb|EFJ77779.1| 30S ribosomal protein S13 [Rothia dentocariosa M567]
 gi|310943440|gb|ADP39734.1| 30S ribosomal protein S13 [Rothia dentocariosa ATCC 17931]
          Length = 153

 Score =  183 bits (467), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   + +      + P+ RV  L + E++ +R  I
Sbjct: 32  MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 91

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 92  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 151

Query: 121 KR 122
           K+
Sbjct: 152 KK 153


>gi|163745566|ref|ZP_02152926.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45]
 gi|161382384|gb|EDQ06793.1| 30S ribosomal protein S13 [Oceanibulbus indolifex HEL-45]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGTSSAKAICEAVGIDATRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254511521|ref|ZP_05123588.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11]
 gi|221535232|gb|EEE38220.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium KLH11]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAKAICEAVGIEAHRRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR V MN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANFTVEGDLRREVQMNVKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260577157|ref|ZP_05845134.1| ribosomal protein S13 [Rhodobacter sp. SW2]
 gi|259020631|gb|EEW23950.1| ribosomal protein S13 [Rhodobacter sp. SW2]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG   ++ IC  + I   RRV+ L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGPHIAEQICEAVGIDRARRVNDLTDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANLTVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312115709|ref|YP_004013305.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220838|gb|ADP72206.1| 30S ribosomal protein S13 [Rhodomicrobium vannielii ATCC 17100]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YIHGIG K +++IC+K++IP ERRV++L ++E++QIR+ I
Sbjct: 1   MARIAGVNIPSNKRVEIGLRYIHGIGAKYAKEICDKVSIPVERRVNELSDAEILQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126724890|ref|ZP_01740733.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150]
 gi|126706054|gb|EBA05144.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2150]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTGKRVPIALTYITGIGTTSAAAICEAVGIESTRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANYNVEGDLRREVTMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257792537|ref|YP_003183143.1| 30S ribosomal protein S13 [Eggerthella lenta DSM 2243]
 gi|317490403|ref|ZP_07948887.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA]
 gi|325833513|ref|ZP_08165962.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1]
 gi|257476434|gb|ACV56754.1| ribosomal protein S13 [Eggerthella lenta DSM 2243]
 gi|316910538|gb|EFV32163.1| 30S ribosomal protein S13 [Eggerthella sp. 1_3_56FAA]
 gi|325485437|gb|EGC87906.1| 30S ribosomal protein S13 [Eggerthella sp. HGA1]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+   L YI+GIG  +S+ I  +  + P  RV  L E ++ ++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVGLTYIYGIGLTTSKKILAETGVDPSVRVKDLTEDDLTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + +VEGDL R V+ N+KRLM++GCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  QANIKVEGDLHREVSQNVKRLMEIGCYRGLRHRRGLPVRGQRTHTNARTRKGPRKQIGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222085697|ref|YP_002544227.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84]
 gi|254811120|sp|B9JDV0|RS13_AGRRK RecName: Full=30S ribosomal protein S13
 gi|221723145|gb|ACM26301.1| 30S ribosomal protein S13 [Agrobacterium radiobacter K84]
          Length = 122

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +Q+IC K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALRYIHGIGPKFAQEICEKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR  +MNIKRLMDLG YRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYQVEGDLRRETSMNIKRLMDLGSYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218294779|ref|ZP_03495633.1| ribosomal protein S13 [Thermus aquaticus Y51MC23]
 gi|218244687|gb|EED11211.1| ribosomal protein S13 [Thermus aquaticus Y51MC23]
          Length = 126

 Score =  183 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGIGPARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENAWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVPGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254421006|ref|ZP_05034730.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3]
 gi|196187183|gb|EDX82159.1| ribosomal protein S13p/S18e [Brevundimonas sp. BAL3]
          Length = 133

 Score =  183 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 79/121 (65%), Positives = 95/121 (78%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  AL YIHGIG  +++DI  K+ I P RRV+QL ++EV+ IR+ I+
Sbjct: 13  ARIAGVNIPTNKRVEIALQYIHGIGPAAAKDITEKVGIEPARRVNQLTDAEVLSIRETID 72

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +K
Sbjct: 73  KDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 132

Query: 122 R 122
           +
Sbjct: 133 K 133


>gi|304321462|ref|YP_003855105.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503]
 gi|303300364|gb|ADM09963.1| 30S ribosomal protein S13 [Parvularcula bermudensis HTCC2503]
          Length = 122

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++I +++ I  ERRV +L ++E+++IR+AI
Sbjct: 1   MARIAGVNIPNNKRVHIALTYIHGIGPSLAKEITDRVGIAEERRVQELSDAEILRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR  A+NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEGYTVEGDLRRETAVNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|256826597|ref|YP_003150556.1| 30S ribosomal protein S13P [Cryptobacterium curtum DSM 15641]
 gi|256582740|gb|ACU93874.1| SSU ribosomal protein S13P [Cryptobacterium curtum DSM 15641]
          Length = 122

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+   L YI+GIG  +SQ I  +  + P+ RV  + E ++ +IR  +
Sbjct: 1   MARLVGVDLPRDKRIEVGLTYIYGIGLTTSQKILAETGVDPDTRVRDITEEDLTKIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  VEGDL R V+ N+KRLM++GCYRGLRHR+GLPV GQRTHTNARTRK   K    +
Sbjct: 61  NENLSVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKQIGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|118579142|ref|YP_900392.1| 30S ribosomal protein S13 [Pelobacter propionicus DSM 2379]
 gi|158706257|sp|A1ALW4|RS13_PELPD RecName: Full=30S ribosomal protein S13
 gi|118501852|gb|ABK98334.1| SSU ribosomal protein S13P [Pelobacter propionicus DSM 2379]
          Length = 122

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+V AL YI+GIG  +++ I     + P  R   L E++V  +R  I
Sbjct: 1   MARIAGIDLPKNKRIVIALTYIYGIGNSTAEKILEATNVDPNTRTDNLTEADVSHLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DRNIKVEGDLRREISMNIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|220903957|ref|YP_002479269.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254811146|sp|B8IYL4|RS13_DESDA RecName: Full=30S ribosomal protein S13
 gi|219868256|gb|ACL48591.1| ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 122

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGIGRTTAMKILDTTGVNWERSIDDLSADEVNEIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ Y+VEGDLRR V+ NIKRLMD+GCYRGLRHRRGLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQHYKVEGDLRREVSSNIKRLMDIGCYRGLRHRRGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|77462281|ref|YP_351785.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides 2.4.1]
 gi|126461157|ref|YP_001042271.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides ATCC 17029]
 gi|221638135|ref|YP_002524397.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131]
 gi|91207723|sp|Q3J5Q0|RS13_RHOS4 RecName: Full=30S ribosomal protein S13
 gi|158706272|sp|A3PGN3|RS13_RHOS1 RecName: Full=30S ribosomal protein S13
 gi|254811163|sp|B9KLB3|RS13_RHOSK RecName: Full=30S ribosomal protein S13
 gi|77386699|gb|ABA77884.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides 2.4.1]
 gi|126102821|gb|ABN75499.1| SSU ribosomal protein S13P [Rhodobacter sphaeroides ATCC 17029]
 gi|221158916|gb|ACL99895.1| 30S ribosomal protein S13 [Rhodobacter sphaeroides KD131]
          Length = 122

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YIHGIG   +  IC+ + I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYIHGIGDFVAGQICDAVGIDRARRVNELSDAEVLSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRR  +MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANVTVEGDLRRETSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148263162|ref|YP_001229868.1| 30S ribosomal protein S13 [Geobacter uraniireducens Rf4]
 gi|189044277|sp|A5GAU3|RS13_GEOUR RecName: Full=30S ribosomal protein S13
 gi|146396662|gb|ABQ25295.1| SSU ribosomal protein S13P [Geobacter uraniireducens Rf4]
          Length = 122

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  ++Q I     +    R   L ESE+ +IR+ I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIYGIGRSTAQKILADAGVDSNTRSDNLTESEIARIRENI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR ++MNIKRLMDLGCYRGLRHR+GLPV GQRT TNARTRK   +    +
Sbjct: 61  DKNVKVEGDLRRDISMNIKRLMDLGCYRGLRHRKGLPVHGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|23492405|dbj|BAC17379.1| putative 30S ribosomal protein S13 [Corynebacterium efficiens
           YS-314]
          Length = 142

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  I
Sbjct: 21  MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 80

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 81  EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 140

Query: 121 KR 122
           K+
Sbjct: 141 KK 142


>gi|295694863|ref|YP_003588101.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912]
 gi|295410465|gb|ADG04957.1| 30S ribosomal protein S13 [Bacillus tusciae DSM 2912]
          Length = 122

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S  I  +  + P+ RV  L + EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRPMSNRILRETGVNPDTRVRDLTDEEVARLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR VAMNIKRL ++GCYRGLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DRNLKVEGDLRRDVAMNIKRLTEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312899069|ref|ZP_07758453.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359]
 gi|310619854|gb|EFQ03430.1| 30S ribosomal protein S13 [Megasphaera micronuciformis F0359]
          Length = 122

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SSQ+I  K  I P+ RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSSSQEILAKTGINPDTRVRDLTEDEVQKIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y+VEGDLRR  A+NIKRL+++  YRG RHR GLP+RGQRT TNARTRK   K    +
Sbjct: 61  GEEYKVEGDLRRETALNIKRLIEVNSYRGKRHRSGLPLRGQRTKTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15807119|ref|NP_295848.1| 30S ribosomal protein S13 [Deinococcus radiodurans R1]
 gi|32363426|sp|Q9RSJ9|RS13_DEIRA RecName: Full=30S ribosomal protein S13
 gi|6459923|gb|AAF11675.1|AE002047_8 ribosomal protein S13 [Deinococcus radiodurans R1]
          Length = 126

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG   S++I  +  + P+ RV  L E+E   +R+AI
Sbjct: 1   MARIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EKTYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|323141379|ref|ZP_08076270.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067]
 gi|322414128|gb|EFY04956.1| 30S ribosomal protein S13 [Phascolarctobacterium sp. YIT 12067]
          Length = 122

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI+GIG   S++I  K  I P+ RV  L E EV +IR+ +
Sbjct: 1   MARISGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEEEVAKIRETL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +QDY+VEGDLRR  ++NIKRL+++G YRG RHR GLPVRGQ T  NARTRK   +    +
Sbjct: 61  DQDYKVEGDLRREESLNIKRLIEIGSYRGRRHRMGLPVRGQNTKNNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|289449373|ref|YP_003475758.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289183920|gb|ADC90345.1| 30S ribosomal protein S13 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 122

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P  KR+  AL YI+GIG   S +I  K  + P+ RV  L + E+ +IR  +
Sbjct: 1   MARISGVDLPNEKRLEIALTYIYGIGRTLSGEIIAKCGLNPDTRVKDLSDDEIAKIRDVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR VA+NIKRL ++GCYRG RHR GLPVRGQRT TNARTRK   +    +
Sbjct: 61  ENQYKVEGDLRREVALNIKRLTEIGCYRGRRHRMGLPVRGQRTKTNARTRKGPKRTMANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|115376113|ref|ZP_01463358.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1]
 gi|310821019|ref|YP_003953377.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1]
 gi|115366928|gb|EAU65918.1| ribosomal protein S13p/S18e [Stigmatella aurantiaca DW4/3-1]
 gi|309394091|gb|ADO71550.1| 30S ribosomal protein S13 [Stigmatella aurantiaca DW4/3-1]
          Length = 128

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 73/121 (60%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P AKR V +L YI+GIG K++ +IC    I    R   L + +  +IR  I
Sbjct: 1   MARIAGVDLPPAKRAVISLQYIYGIGNKTAHEICAAAGIDLTTRTKDLTDEQARKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTN+RTRK   +G V  
Sbjct: 61  EANLKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNSRTRKGPKRGIVRA 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|313895242|ref|ZP_07828799.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529820|ref|ZP_08030897.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399]
 gi|312976137|gb|EFR41595.1| 30S ribosomal protein S13 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320137838|gb|EFW29743.1| 30S ribosomal protein S13 [Selenomonas artemidis F0399]
          Length = 122

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +S+ +     + P+ R   L E EV+++R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTTSKKLLAIADVNPDARTRDLTEDEVVRLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR V MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNAVVEGDLRREVQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83854950|ref|ZP_00948480.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1]
 gi|83842793|gb|EAP81960.1| 30S ribosomal protein S13 [Sulfitobacter sp. NAS-14.1]
          Length = 133

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 76/121 (62%), Positives = 92/121 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RR+++L ++E+++IR+ I+
Sbjct: 13  ARIAGVNIPTAKRVPIALTYITGIGNSSAAAICEAVGIDSTRRINELSDAEILKIREYID 72

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           ++Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K
Sbjct: 73  ENYTVEGDLRRDTQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKK 132

Query: 122 R 122
           +
Sbjct: 133 K 133


>gi|282857338|ref|ZP_06266575.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455]
 gi|282584838|gb|EFB90169.1| 30S ribosomal protein S13 [Pyramidobacter piscolens W5455]
          Length = 126

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 86/124 (69%), Gaps = 3/124 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  ++++I  K  + P+ RV  L E E   +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSTAREILKKTGVNPDTRVKDLTEEEAQLLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART---RKKFGKGG 117
             +++VEGDLRR V+MNIKRLMD+GCYRG+RHR GLP RGQRT TNART   RK   +  
Sbjct: 61  VNNHKVEGDLRREVSMNIKRLMDIGCYRGIRHRLGLPCRGQRTKTNARTWKNRKGRSRPV 120

Query: 118 VARK 121
             +K
Sbjct: 121 AGKK 124


>gi|114570323|ref|YP_757003.1| 30S ribosomal protein S13 [Maricaulis maris MCS10]
 gi|122315803|sp|Q0ANS2|RS13_MARMM RecName: Full=30S ribosomal protein S13
 gi|114340785|gb|ABI66065.1| SSU ribosomal protein S13P [Maricaulis maris MCS10]
          Length = 122

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG   +++IC +++I PERRV +L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVEIALRYIHGIGPAKAKEICEQVSILPERRVSELTDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+QVEGDLRR VA+NIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDHQVEGDLRREVAVNIKRLMDLGNYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|240850813|ref|YP_002972213.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup]
 gi|240267936|gb|ACS51524.1| 30S ribosomal protein S13 [Bartonella grahamii as4aup]
          Length = 122

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  ++ IP  RRVH+L ++EV+Q+R+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEIIERVGIPLGRRVHELSDAEVLQVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|253577205|ref|ZP_04854525.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843449|gb|EES71477.1| 30S ribosomal protein S13 [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 122

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I     I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKTTGINPDTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKTVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|46199605|ref|YP_005272.1| 30S ribosomal protein S13 [Thermus thermophilus HB27]
 gi|55981636|ref|YP_144933.1| 30S ribosomal protein S13 [Thermus thermophilus HB8]
 gi|24212669|sp|P80377|RS13_THET8 RecName: Full=30S ribosomal protein S13
 gi|50401368|sp|P62655|RS13_THET2 RecName: Full=30S ribosomal protein S13
 gi|10835597|pdb|1FJG|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotics Streptomycin,
           Spectinomycin, And Paromomycin
 gi|13096406|pdb|1HR0|M Chain M, Crystal Structure Of Initiation Factor If1 Bound To The
           30s Ribosomal Subunit
 gi|13399804|pdb|1HNW|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Tetracycline
 gi|13399826|pdb|1HNX|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Pactamycin
 gi|13399848|pdb|1HNZ|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Hygromycin B
 gi|14278022|pdb|1GIX|P Chain P, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1gix, Contains The 30s Ribosome Subunit,
           Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
           In The File 1giy
 gi|14278068|pdb|1IBK|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotic Paromomycin
 gi|14278089|pdb|1IBL|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site And With The Antibiotic Paromomycin
 gi|14278113|pdb|1IBM|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site
 gi|15826132|pdb|1JGO|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826157|pdb|1JGP|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|15826182|pdb|1JGQ|P Chain P, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 gi|20663898|pdb|1J5E|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit
 gi|24987759|pdb|1MJ1|P Chain P, Fitting The Ternary Complex Of Ef-TuTRNAGTP AND RIBOSOMAL
           Proteins Into A 13 A Cryo-Em Map Of The Coli 70s
           Ribosome
 gi|27065888|pdb|1N32|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The First Codon
           Position At The A Site With Paromomycin
 gi|27065915|pdb|1N33|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Bound To Codon And Near-Cognate Transfer Rna
           Anticodon Stem-Loop Mismatched At The Second Codon
           Position At The A Site With Paromomycin
 gi|27065942|pdb|1N34|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Codon And
           Crystallographically Disordered Near-Cognate Transfer
           Rna Anticodon Stem-Loop Mismatched At The First Codon
           Position
 gi|27065968|pdb|1N36|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In The Presence Of Crystallographically
           Disordered Codon And Near-Cognate Transfer Rna Anticodon
           Stem-Loop Mismatched At The Second Codon Position
 gi|28373711|pdb|1ML5|P Chain P, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|58177412|pdb|1XMO|M Chain M, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
           With Aag-Mrna In The Decoding Center
 gi|58177435|pdb|1XMQ|M Chain M, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
           Decoding Center
 gi|58177476|pdb|1XNQ|M Chain M, Structure Of An Inosine-Adenine Wobble Base Pair Complex
           In The Context Of The Decoding Center
 gi|58177499|pdb|1XNR|M Chain M, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
           In The Context Of The Decoding Center
 gi|66361066|pdb|1YL4|P Chain P, Crystal Structure Of 70s Ribosome With Thrs Operator And
           Trnas. 30s Subunit. The Coordinates For The 50s Subunit
           Are In The Pdb Entry 1yl3
 gi|88192248|pdb|2B64|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|88192311|pdb|2B9M|M Chain M, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400.
 gi|88192367|pdb|2B9O|M Chain M, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
           Structure Of The Whole Ribosomal Complex With A Stop
           Codon In The A-Site. This File Contains The 30s Subunit,
           Trnas And Mrna From A Crystal Structure Of The Whole
           Ribosomal Complex With A Stop Codon In The A-Site And Is
           Described In Remark 400.
 gi|110591335|pdb|2F4V|M Chain M, 30s Ribosome + Designer Antibiotic
 gi|116667666|pdb|2HHH|M Chain M, Crystal Structure Of Kasugamycin Bound To The 30s
           Ribosomal Subunit
 gi|116668209|pdb|2J00|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule I.
 gi|116668270|pdb|2J02|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
           This File Contains The 30s Subunit, Mrna, A-, P- And
           E-Site Trnas And Paromomycin For Molecule Ii.
 gi|119389724|pdb|2HGI|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
           This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
 gi|119389781|pdb|2HGP|P Chain P, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
           With Translocated And Rotated Shine-Dalgarno Duplex.
           This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
 gi|119389837|pdb|2HGR|P Chain P, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
           P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
           Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
           Found In Pdb Entry 2hgu.
 gi|149242720|pdb|2OW8|NN Chain n, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
           Functional Interactions And Rearrangements. This File,
           2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File
           1vsa.
 gi|149243630|pdb|2UU9|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gug-Codon In The
           A-Site And Paromomycin.
 gi|149243657|pdb|2UUA|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guc-Codon In The
           A-Site And Paromomycin.
 gi|149243684|pdb|2UUB|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Guu-Codon In The
           A-Site And Paromomycin.
 gi|149243711|pdb|2UUC|M Chain M, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit Complexed With A Valine-Asl With Cmo5u In
           Position 34 Bound To An Mrna With A Gua-Codon In The
           A-Site And Paromomycin.
 gi|149243850|pdb|2UXC|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Ucgu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836420|pdb|2UXB|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Gggu In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|157836497|pdb|2V46|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836553|pdb|2V48|M Chain M, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158430912|pdb|2UXD|M Chain M, Crystal Structure Of An Extended Trna Anticodon Stem Loop
           In Complex With Its Cognate Mrna Cggg In The Context Of
           The Thermus Thermophilus 30s Subunit.
 gi|160285951|pdb|2QNH|NN Chain n, Interactions And Dynamics Of The Shine-Dalgarno Helix In
           The 70s Ribosome. This File, 2qnh, Contains The 30s
           Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
           Ribosome Subunit Is In The File 1vsp.
 gi|186972861|pdb|2VQE|M Chain M, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|186972884|pdb|2VQF|M Chain M, Modified Uridines With C5-Methylene Substituents At The
           First Position Of The Trna Anticodon Stabilize U-G
           Wobble Pairing During Decoding
 gi|209156508|pdb|3D5A|M Chain M, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156564|pdb|3D5C|M Chain M, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|211938831|pdb|2JL5|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938889|pdb|2JL7|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|218766785|pdb|3F1E|M Chain M, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766841|pdb|3F1G|M Chain M, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|226887386|pdb|2WDG|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule I.
 gi|226887411|pdb|2WDH|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A-Site Trna,
           Deacylated P-Site Trna, And E-Site Trna.  This File
           Contains The 30s Subunit A-,P-, And E-Site Trnas And
           Paromomycin For Molecule Ii.
 gi|226887500|pdb|2WDK|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule I.
 gi|226887557|pdb|2WDM|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome In
           Complex With Mrna, Paromomycin, Acylated A- And P-Site
           Trnas, And E-Site Trna.  This File Contains The 30s
           Subunit A-,P-, And E-Site Trnas And Paromomycin For
           Molecule Ii.
 gi|237823541|pdb|2WH1|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823600|pdb|2WH3|M Chain M, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit.
 gi|260099998|pdb|3HUW|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule I.
 gi|260100054|pdb|3HUY|M Chain M, Structure Of Ef-P Bound To The 70s Ribosome; This File
           Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
           Molecule Ii.
 gi|261824496|pdb|2WRI|M Chain M, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 1 Of 4).
 gi|261824558|pdb|2WRK|M Chain M, The Structure Of The Ribosome With Elongation Factor G
           Trapped In The Post-Translocational State (Part 3 Of 4).
 gi|261824620|pdb|2WRN|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 1 Of 4).
 gi|261824679|pdb|2WRQ|M Chain M, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
           And Trna (Part 3 Of 4).
 gi|281307179|pdb|3KIQ|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 1 Of 4)
 gi|281307237|pdb|3KIS|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Precleavage State; Part 3 Of 4)
 gi|281307295|pdb|3KIU|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 1 Of 4)
 gi|281307353|pdb|3KIX|MM Chain m, Structure Of Rele Nuclease Bound To The 70s Ribosome
           (Postcleavage State; Part 3 Of 4)
 gi|288965616|pdb|3KNH|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule I
 gi|289526694|pdb|3KNJ|M Chain M, The Structures Of Viomycin Bound To The 70s Ribosome. This
           File Contains The 30s Subunit For Molecule Ii'
 gi|289526719|pdb|3KNL|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule I
 gi|289526744|pdb|3KNN|M Chain M, The Structures Of Capreomycin Bound To The 70s Ribosome.
           This File Contains The 30s Subunit For Molecule Ii
 gi|294979516|pdb|3I8G|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
           The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
           (50s).
 gi|294979541|pdb|3I8H|P Chain P, Elongation Complex Of The 70s Ribosome With Three Trnas
           And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
           Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
           The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
           (30s).
 gi|294979600|pdb|3I9B|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
           The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
           A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
           And 3i9e (50s)
 gi|294979654|pdb|3I9D|P Chain P, Initiation Complex Of 70s Ribosome With Two Trnas And
           Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
           The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
           B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
           And 3i9c (50s)
 gi|295982087|pdb|2X9R|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982146|pdb|2X9T|M Chain M, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|307567974|pdb|2XFZ|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 1 Of 4)
 gi|307568032|pdb|2XG1|M Chain M, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 3 Of 4)
 gi|307776624|pdb|3OTO|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
           Mutant Of Thermus Thermophilus (Hb8)
 gi|309320247|pdb|3OGE|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320268|pdb|3OGY|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Chloramphenicol. This File Contains The 30s Subunit
           Of One 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|309320349|pdb|3OHC|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320370|pdb|3OHD|M Chain M, Structure Of The Thermus Thermophilus Ribosome Complexed
           With Erythromycin. This File Contains The 30s Subunit Of
           One 70s Ribosome. The Entire Crystal Structure Contains
           Two 70s Ribosomes.
 gi|309320451|pdb|3OHY|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320502|pdb|3OI0|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Azithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320553|pdb|3OI2|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|309320604|pdb|3OI4|M Chain M, Structure Of The Thermus Thermophilus 70s Ribosome
           Complexed With Telithromycin. This File Contains The 30s
           Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|312207685|pdb|2XQD|M Chain M, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
           Ribosome With A Gtp Analog
 gi|313754011|pdb|2XSY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Pre-
           Translocational Translocation Intermediate Ti(Pre)
 gi|313754126|pdb|2XUY|M Chain M, Trna Tranlocation On The 70s Ribosome: The Post-
           Translocational Translocation Intermediate Ti(Post)
 gi|325533414|pdb|2Y0U|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533473|pdb|2Y0W|M Chain M, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
           Near-Cognate Codon On The 70s Ribosome
 gi|325533532|pdb|2Y0Y|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533591|pdb|2Y10|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|325533650|pdb|2Y12|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Near-Cognate Codon On The 70s Ribosome
 gi|325533709|pdb|2Y14|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533768|pdb|2Y16|M Chain M, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
           A Cognate Codon On The 70s Ribosome.
 gi|325533827|pdb|2Y18|M Chain M, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
           Cognate Codon On The 70s Ribosome.
 gi|4519420|dbj|BAA75546.1| ribosomal protein S13 [Thermus thermophilus]
 gi|46197231|gb|AAS81645.1| SSU ribosomal protein S13P [Thermus thermophilus HB27]
 gi|55773049|dbj|BAD71490.1| 30S ribosomal protein S13 [Thermus thermophilus HB8]
          Length = 126

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|39997926|ref|NP_953877.1| 30S ribosomal protein S13 [Geobacter sulfurreducens PCA]
 gi|81701334|sp|Q749B0|RS13_GEOSL RecName: Full=30S ribosomal protein S13
 gi|39984871|gb|AAR36227.1| ribosomal protein S13 [Geobacter sulfurreducens PCA]
 gi|298506864|gb|ADI85587.1| ribosomal protein S13 [Geobacter sulfurreducens KN400]
          Length = 122

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI GIG  ++Q I  +  +  + R   L ESEV +IR  I
Sbjct: 1   MARIAGIDLPRNKRIEIALTYIFGIGRTTAQRILAETGVSADTRTDNLAESEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR V+M+IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKNLKVEGDLRRDVSMDIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|217077307|ref|YP_002335025.1| 30S ribosomal protein S13 [Thermosipho africanus TCF52B]
 gi|226712795|sp|B7IHX0|RS13_THEAB RecName: Full=30S ribosomal protein S13
 gi|217037162|gb|ACJ75684.1| ribosomal protein S13p/S18e [Thermosipho africanus TCF52B]
          Length = 122

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL YI+GIG   ++ IC    I P++RV +L + E+ +I   I
Sbjct: 1   MARIVGVEIPNDKKVEIALTYIYGIGRTRAKQICEATNIDPDKRVRELNDEEISKIATYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+++VEG+LR  V  NIKRL+D+GCYRG RH+ GLPVRGQ+T +NARTRK      + +
Sbjct: 61  QQNFKVEGELRTEVMQNIKRLIDIGCYRGFRHKLGLPVRGQKTKSNARTRKGPRPSRIKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|49475772|ref|YP_033813.1| 30S ribosomal protein S13 [Bartonella henselae str. Houston-1]
 gi|81647796|sp|Q6G2Y7|RS13_BARHE RecName: Full=30S ribosomal protein S13
 gi|49238579|emb|CAF27820.1| 30S ribosomal protein s13 [Bartonella henselae str. Houston-1]
          Length = 122

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K+ IP  RRVH+L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKFAQEITKKVGIPIGRRVHELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR VAMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYQVEGDLRREVAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|117924177|ref|YP_864794.1| 30S ribosomal protein S13 [Magnetococcus sp. MC-1]
 gi|158706244|sp|A0L5Z5|RS13_MAGSM RecName: Full=30S ribosomal protein S13
 gi|117607933|gb|ABK43388.1| SSU ribosomal protein S13P [Magnetococcus sp. MC-1]
          Length = 122

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GI   S++ I  +  I P+ RV  L ++EV Q+R  I
Sbjct: 1   MARIAGVNIPVNKRVEIALTYIYGICRDSAKRITKEAGIEPQVRVSDLTDAEVAQLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR +AMN+KRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK   K    +
Sbjct: 61  DNNHTVEGDLRRQIAMNVKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|108761573|ref|YP_631522.1| 30S ribosomal protein S13 [Myxococcus xanthus DK 1622]
 gi|123374507|sp|Q1D751|RS13_MYXXD RecName: Full=30S ribosomal protein S13
 gi|108465453|gb|ABF90638.1| ribosomal protein S13 [Myxococcus xanthus DK 1622]
          Length = 127

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/121 (63%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  KR V +L YI+GIG KS+QDI     I P  R   L E +  +IR+ I
Sbjct: 1   MARIAGIDLPPNKRAVISLQYIYGIGNKSAQDIIAAAGIDPTTRTKDLTEEQARKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR V MNIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   +G V  
Sbjct: 61  EASYKVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRGIVRA 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|304315966|ref|YP_003851111.1| 30S ribosomal protein S13 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|323706476|ref|ZP_08118037.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|302777468|gb|ADL68027.1| 30S ribosomal protein S13 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|323534196|gb|EGB23986.1| 30S ribosomal protein S13 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 122

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/113 (60%), Positives = 87/113 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG   S +I  K  + P+ RV  L E EV ++R  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRSRSNEILAKAGVNPDTRVKDLTEDEVSRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           +++Y+VEGDLRR V++NIKRL+D+GCYRG+RHR+GLPVRGQRT TNARTRK  
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLIDIGCYRGIRHRKGLPVRGQRTRTNARTRKGP 113


>gi|320335499|ref|YP_004172210.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211]
 gi|319756788|gb|ADV68545.1| 30S ribosomal protein S13 [Deinococcus maricopensis DSM 21211]
          Length = 126

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   ++++  +  + P+ RV  L E+E  Q+R AI
Sbjct: 1   MARIAGVDLPREKRIEIALTYIYGIGLTRAKEVLAQTGVNPDTRVKNLSEAEQGQLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ ++VEGDLR  +  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EKTFKVEGDLRSEIGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254461772|ref|ZP_05075188.1| ribosomal protein S13p/S18e [Rhodobacterales bacterium HTCC2083]
 gi|206678361|gb|EDZ42848.1| ribosomal protein S13p/S18e [Rhodobacteraceae bacterium HTCC2083]
          Length = 122

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI GIG  S++ IC  + I   RRV++L ++EV+ +R+ I
Sbjct: 1   MARIAGVNIPTHKRVPIALTYITGIGPASAKAICEAVKIDETRRVNELSDAEVLAVREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 61  DATYNVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302388737|ref|YP_003824558.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646]
 gi|302199365|gb|ADL06935.1| SSU ribosomal protein S13P [Thermosediminibacter oceani DSM 16646]
          Length = 123

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/121 (59%), Positives = 90/121 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG   S  I  +  + P+ RV  L E E+  +R  I
Sbjct: 1   MARIAGVDLPKDKRVEIALTYIYGIGRSLSNKILKEAGVNPDTRVKDLTEREISNLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   K   AR
Sbjct: 61  EKNYKVEGDLRREVALNIKRLIEIGCYRGIRHRRGLPVRGQRTRTNARTRKGPRKTVGAR 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|221632954|ref|YP_002522177.1| 30S ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159]
 gi|254811173|sp|B9KZW3|RS13_THERP RecName: Full=30S ribosomal protein S13
 gi|221156457|gb|ACM05584.1| ribosomal protein S13p/S18e [Thermomicrobium roseum DSM 5159]
          Length = 128

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL  I+GIG+ +++ I  +  I P  +V  L + EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRIEYALTLIYGIGWTTARKILERTGIDPWTKVRDLTDDEVQRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  VEGDLRR VAMNIKRL+D+GCYRGLRHR GLPVRGQRT TNARTRK        +
Sbjct: 61  EKEMVVEGDLRRQVAMNIKRLIDIGCYRGLRHRMGLPVRGQRTRTNARTRKGPRPRIGVK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|168334326|ref|ZP_02692513.1| 30S ribosomal protein S13 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 122

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  SS+ I   + I  + RV  L + +  +IR  I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIYGIGRPSSRKILEAVGIDFDTRVKDLTDEQADKIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+   VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  EKTMMVEGDLRREVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114771245|ref|ZP_01448665.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255]
 gi|114548170|gb|EAU51057.1| 30S ribosomal protein S13 [alpha proteobacterium HTCC2255]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV  AL YI GIG  S+  ICN   I   RR+++L ++E++ IR+ I
Sbjct: 1   MARIAGVNLPTHKRVPIALTYITGIGPASADKICNGTKIDAARRINELSDAEILSIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  DANFEVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|46202866|ref|ZP_00052474.2| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 125

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   + +I   L IP ERRV+QL + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALTYIHGIGRAKATEITTSLGIPAERRVNQLTDDEVLKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+QVEGDLRR+VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK   K    +
Sbjct: 61  DRDFQVEGDLRRSVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325261518|ref|ZP_08128256.1| 30S ribosomal protein S13 [Clostridium sp. D5]
 gi|324032972|gb|EGB94249.1| 30S ribosomal protein S13 [Clostridium sp. D5]
          Length = 127

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ RV  L   EV +I + I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILTEAGVNPDTRVRDLTSEEVKKISEVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 66  EQSQTVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125

Query: 121 KR 122
           K+
Sbjct: 126 KK 127


>gi|15605671|ref|NP_213046.1| 30S ribosomal protein S13 [Aquifex aeolicus VF5]
 gi|6226059|sp|O66486|RS13_AQUAE RecName: Full=30S ribosomal protein S13
 gi|2982822|gb|AAC06445.1| ribosomal protein S13 [Aquifex aeolicus VF5]
          Length = 126

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG+  +++IC K  IP  +RV +L   E+  +R+ I
Sbjct: 1   MARIAGVDLPNNKRLEVALTYIYGIGWSRAREICEKTGIPCTKRVGELTPDELNTLRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR V +NIK+L D+GCYRG+RH RGLPVRGQ+T TNARTRK   K     
Sbjct: 61  DENYKVEGDLRREVQLNIKKLKDMGCYRGIRHARGLPVRGQQTRTNARTRKGKRKTVGGT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307694126|ref|ZP_07636363.1| 30S ribosomal protein S13 [Ruminococcaceae bacterium D16]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG  S+  I  K  I P+ RV  L E +  ++R+ I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRTSANKILAKAGINPDTRVKDLTEDDEAKLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y VEGDLRR VAM+IKRL ++GCYRG+RHR+GLPVRGQR+ TNARTRK   +    +
Sbjct: 61  SHEYTVEGDLRRNVAMDIKRLTEIGCYRGIRHRKGLPVRGQRSKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153816226|ref|ZP_01968894.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756]
 gi|317501798|ref|ZP_07959984.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|145846409|gb|EDK23327.1| hypothetical protein RUMTOR_02475 [Ruminococcus torques ATCC 27756]
 gi|316896831|gb|EFV18916.1| 30S ribosomal protein [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 127

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L   EV +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 66  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125

Query: 121 KR 122
           K+
Sbjct: 126 KK 127


>gi|291518022|emb|CBK73243.1| 30S ribosomal protein S13 [Butyrivibrio fibrisolvens 16/4]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  +     + P  RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGRVSSNKVLEAAGVDPNTRVKDLTDEEVKKISTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEG+LRR VA++IKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETLTVEGNLRREVALDIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|94496223|ref|ZP_01302801.1| ribosomal protein S13 [Sphingomonas sp. SKA58]
 gi|94424402|gb|EAT09425.1| ribosomal protein S13 [Sphingomonas sp. SKA58]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 81/122 (66%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRHTAVSIADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|38233155|ref|NP_938922.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae NCTC 13129]
 gi|81401847|sp|Q6NJ66|RS13_CORDI RecName: Full=30S ribosomal protein S13
 gi|38199414|emb|CAE49057.1| 30S ribosomal protein S13 [Corynebacterium diphtheriae]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLEETGISPDLRTDNLTDEQVSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|331004146|ref|ZP_08327626.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411556|gb|EGG90966.1| 30S ribosomal protein S13 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 122

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS+ I  +  + P+ RV  L + EV ++ Q I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTSSKRILKEAGVNPDTRVKDLTDDEVKELAQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  SDSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89893242|ref|YP_516729.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51]
 gi|219666515|ref|YP_002456950.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense DCB-2]
 gi|122483916|sp|Q250K7|RS13_DESHY RecName: Full=30S ribosomal protein S13
 gi|254811147|sp|B8G1Z1|RS13_DESHD RecName: Full=30S ribosomal protein S13
 gi|89332690|dbj|BAE82285.1| 30S ribosomal protein S13 [Desulfitobacterium hafniense Y51]
 gi|219536775|gb|ACL18514.1| ribosomal protein S13 [Desulfitobacterium hafniense DCB-2]
          Length = 123

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  ++Q I  +  + PE R+  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIYGIGLPTAQKILARTGVNPETRIRDLSEEEVNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK   K   A+
Sbjct: 61  DKEIKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGPIKTVGAK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|289548517|ref|YP_003473505.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484]
 gi|289182134|gb|ADC89378.1| 30S ribosomal protein S13 [Thermocrinis albus DSM 14484]
          Length = 126

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL Y++GIG+  +++IC K  IP  +R+ +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYLYGIGWSRAREICEKTGIPCTKRLGELTPDELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T TNARTRK   K     
Sbjct: 61  EQNYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRTNARTRKGKRKTVGGT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255659526|ref|ZP_05404935.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544]
 gi|260848079|gb|EEX68086.1| 30S ribosomal protein S13 [Mitsuokella multacida DSM 20544]
          Length = 123

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG K+SQ++     I P+ R   L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIFGIGLKTSQELLKMTGINPDTRTRDLTEDEVVKLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR   MNIKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKNVVVEGDLRRERQMNIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPKKAVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302382641|ref|YP_003818464.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264]
 gi|302193269|gb|ADL00841.1| 30S ribosomal protein S13 [Brevundimonas subvibrioides ATCC 15264]
          Length = 133

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/121 (65%), Positives = 95/121 (78%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  AL YIHGIG  +++DI  K+ I   RRV+QL ++EV+QIR+ I+
Sbjct: 13  ARIAGVNIPTNKRVEIALQYIHGIGPAAAKDIVGKVGIEASRRVNQLTDAEVLQIRETID 72

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +K
Sbjct: 73  KDHTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 132

Query: 122 R 122
           +
Sbjct: 133 K 133


>gi|326387081|ref|ZP_08208691.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208262|gb|EGD59069.1| 30S ribosomal protein S13 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   ++ I +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIVALTYIHGIGPFKARQIADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|256390170|ref|YP_003111734.1| 30S ribosomal protein S13 [Catenulispora acidiphila DSM 44928]
 gi|256356396|gb|ACU69893.1| ribosomal protein S13 [Catenulispora acidiphila DSM 44928]
          Length = 126

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KR+  AL YI+GIG   SQ  C +  I P  RV  L E +++++RQ I
Sbjct: 1   MARLSGVDIPREKRLEIALTYIYGIGRTRSQKTCAETGINPNTRVKDLTEDDLVKLRQWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR V  +I+R +++GCY+G+RHR+GLPV GQRTHTNARTRK   K    +
Sbjct: 61  DTNYRVEGDLRREVQADIRRKIEIGCYQGVRHRKGLPVHGQRTHTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312140892|ref|YP_004008228.1| 30S ribosomal protein s13 rpsm [Rhodococcus equi 103S]
 gi|325675470|ref|ZP_08155154.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
 gi|311890231|emb|CBH49549.1| 30S ribosomal protein S13 RpsM [Rhodococcus equi 103S]
 gi|325553441|gb|EGD23119.1| 30S ribosomal protein S13 [Rhodococcus equi ATCC 33707]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG  +S++I     + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTTSKEILAATGVNPDLRSKDLTDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EESVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269837091|ref|YP_003319319.1| 30S ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745]
 gi|269786354|gb|ACZ38497.1| ribosomal protein S13 [Sphaerobacter thermophilus DSM 20745]
          Length = 124

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 73/122 (59%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  +S+ +  +  + P+ RV  L + EV ++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIYGIGLSTSKKLLERTGVSPDTRVRDLTDDEVGRLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  VEGDLRR + MNIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   +    R
Sbjct: 61  EKEMVVEGDLRREINMNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPKRAIGVR 120

Query: 121 KR 122
           KR
Sbjct: 121 KR 122


>gi|227871777|ref|ZP_03990182.1| ribosomal protein S13 [Oribacterium sinus F0268]
 gi|227842378|gb|EEJ52603.1| ribosomal protein S13 [Oribacterium sinus F0268]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + EV  +   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAETGVNPDTRVKDLTDDEVKTLATYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  AEHQMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|150015069|ref|YP_001307323.1| 30S ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052]
 gi|189040496|sp|A6LPT7|RS13_CLOB8 RecName: Full=30S ribosomal protein S13
 gi|149901534|gb|ABR32367.1| ribosomal protein S13 [Clostridium beijerinckii NCIMB 8052]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KRV   L YI+GIG  +SQ I     I P+ RV  L E EV +IR  I
Sbjct: 1   MARISGIDLPREKRVEIGLTYIYGIGLSTSQKILAVTGINPDTRVKDLSEEEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  NKNLMVEGDLRRDVALNIKRLVEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|229825292|ref|ZP_04451361.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC
           49176]
 gi|229790664|gb|EEP26778.1| hypothetical protein GCWU000182_00646 [Abiotrophia defectiva ATCC
           49176]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   S +I  K A+ P+ R   L + +V +IR  I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRAKSNEILTKAAVDPDIRCKDLSDEQVGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+   VEGDLRR VAMNIKRL ++GCYRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 61  EESVLVEGDLRREVAMNIKRLQEIGCYRGVRHRKGLPVRGQNTKNNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302330096|gb|ADL20290.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis 1002]
          Length = 143

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 22  MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 81

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 82  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 141

Query: 121 KR 122
           K+
Sbjct: 142 KK 143


>gi|298291460|ref|YP_003693399.1| 30S ribosomal protein S13 [Starkeya novella DSM 506]
 gi|296927971|gb|ADH88780.1| 30S ribosomal protein S13 [Starkeya novella DSM 506]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKNAADIVEKVGIPLDRRVNQLTDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|87200542|ref|YP_497799.1| 30S ribosomal protein S13 [Novosphingobium aromaticivorans DSM
           12444]
 gi|123488705|sp|Q2G5A8|RS13_NOVAD RecName: Full=30S ribosomal protein S13
 gi|87136223|gb|ABD26965.1| SSU ribosomal protein S13P [Novosphingobium aromaticivorans DSM
           12444]
          Length = 122

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   ++ I +KL I   RRV  L ++E++QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGSFKAKQIADKLGIDHSRRVQDLSDAEILQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLRR VAMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DAEHTVEGDLRREVAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255994831|ref|ZP_05427966.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989]
 gi|255993544|gb|EEU03633.1| 30S ribosomal protein S13 [Eubacterium saphenum ATCC 49989]
          Length = 132

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P  KR+   L Y++GIG   S++I  K  + P+ RV  L E EV +IR+ I
Sbjct: 11  MARLAGVDLPNDKRIEIGLTYVYGIGNTKSKEILAKAKVDPDTRVKDLTEDEVGEIRKVI 70

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++ VEGDLRR  +MNIKRLM++GCYRG+RHR+GLPVRGQ+T TNARTRK   K     
Sbjct: 71  ENEHMVEGDLRRENSMNIKRLMEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVGRS 130

Query: 121 KR 122
           K+
Sbjct: 131 KK 132


>gi|153004797|ref|YP_001379122.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5]
 gi|166231897|sp|A7HBP2|RS13_ANADF RecName: Full=30S ribosomal protein S13
 gi|152028370|gb|ABS26138.1| ribosomal protein S13 [Anaeromyxobacter sp. Fw109-5]
          Length = 127

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/120 (61%), Positives = 92/120 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  ++Q IC++  +    R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVALQYIYGIGKTTAQAICHRANVDVTTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ  +VEGDLRR +++NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V +
Sbjct: 61  EQAVKVEGDLRREISLNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLVRK 120


>gi|150020870|ref|YP_001306224.1| 30S ribosomal protein S13 [Thermosipho melanesiensis BI429]
 gi|166231928|sp|A6LLN8|RS13_THEM4 RecName: Full=30S ribosomal protein S13
 gi|149793391|gb|ABR30839.1| ribosomal protein S13 [Thermosipho melanesiensis BI429]
          Length = 122

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL YI+GIG   ++ IC    I P +RV +L + E+ +I   I
Sbjct: 1   MARIVGVEIPNDKKVEIALTYIYGIGKTRAKQICEATNIDPNKRVRELGDEEISKIATFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+Y+VEG+LR  V  NIKRL+D+GCYRGLRH+ GLPVRGQ+T +NARTRK      + +
Sbjct: 61  QQNYKVEGELRTEVMQNIKRLIDIGCYRGLRHKLGLPVRGQKTKSNARTRKGPRPSRIKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300857806|ref|YP_003782789.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685260|gb|ADK28182.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis
           FRC41]
          Length = 142

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 21  MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 80

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 81  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 140

Query: 121 KR 122
           K+
Sbjct: 141 KK 142


>gi|331088681|ref|ZP_08337591.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330407204|gb|EGG86707.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 122

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L   EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSASRILADAGVDPNTRVRDLTSEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 61  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|322381103|ref|ZP_08055106.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154679|gb|EFX46950.1| 30S ribosomal protein S13-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+ AL YI GIG  ++Q I N+  + P+ RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDLPRDKRVIIALTYIFGIGKTTAQKIINETGVNPDTRVRDLTEDEISKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKQLKVEGDLRREIALNIKRLVEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225574730|ref|ZP_03783340.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038059|gb|EEG48305.1| hypothetical protein RUMHYD_02807 [Blautia hydrogenotrophica DSM
           10507]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRPSATRILADAKVNPDTRVRDLTDEEVNRIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|313680490|ref|YP_004058229.1| SSU ribosomal protein s13p [Oceanithermus profundus DSM 14977]
 gi|313153205|gb|ADR37056.1| SSU ribosomal protein S13P [Oceanithermus profundus DSM 14977]
          Length = 126

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI+GIG   +++      I    RV  L E +V+++R  +
Sbjct: 1   MARIAGVEIPRNKRVEIALTYIYGIGRTRAKEALEATGIDGSIRVKDLSEQDVVKLRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EG+LR  V  NIKRLMD+GCYRGLRHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  ENKWKLEGELRSEVQSNIKRLMDIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114704506|ref|ZP_01437414.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506]
 gi|114539291|gb|EAU42411.1| 30S ribosomal protein S13 [Fulvimarina pelagi HTCC2506]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR V AL YIHGIG   ++ I  K  +  +RRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRAVIALQYIHGIGPSLAKQIMAKANLTEDRRVNDLSDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++QVEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DREHQVEGDLRRETSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325663037|ref|ZP_08151487.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331086644|ref|ZP_08335721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325470491|gb|EGC73721.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330409810|gb|EGG89245.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRVSSNRILEEAGVNPDTRVRDLTDEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETQLVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|222529705|ref|YP_002573587.1| 30S ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
 gi|302871523|ref|YP_003840159.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
 gi|312127251|ref|YP_003992125.1| 30S ribosomal protein s13 [Caldicellulosiruptor hydrothermalis 108]
 gi|312135471|ref|YP_004002809.1| 30S ribosomal protein s13 [Caldicellulosiruptor owensensis OL]
 gi|312622070|ref|YP_004023683.1| 30S ribosomal protein s13 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254811124|sp|B9MKF6|RS13_ANATD RecName: Full=30S ribosomal protein S13
 gi|222456552|gb|ACM60814.1| ribosomal protein S13 [Caldicellulosiruptor bescii DSM 6725]
 gi|302574382|gb|ADL42173.1| 30S ribosomal protein S13 [Caldicellulosiruptor obsidiansis OB47]
 gi|311775522|gb|ADQ05009.1| 30S ribosomal protein S13 [Caldicellulosiruptor owensensis OL]
 gi|311777270|gb|ADQ06756.1| 30S ribosomal protein S13 [Caldicellulosiruptor hydrothermalis 108]
 gi|312202537|gb|ADQ45864.1| 30S ribosomal protein S13 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 124

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|73913588|gb|AAZ91709.1| 30S Ribosomal protein S13 [Corynebacterium stationis]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EASWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154498910|ref|ZP_02037288.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC
           29799]
 gi|150271750|gb|EDM98976.1| hypothetical protein BACCAP_02902 [Bacteroides capillosus ATCC
           29799]
          Length = 122

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+   L YI+GIG  S+  I  +  I P+ RV  L E++   +R+ I
Sbjct: 1   MARIAGIDLPKDKRIEIGLTYIYGIGRTSANKILAETGINPDTRVKDLTEADEAALRECI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y VEGDLRR VAM+IKRL ++GCYRGLRHR+GLPVRGQR+ TNARTRK   +    +
Sbjct: 61  AHNYTVEGDLRRDVAMDIKRLTEIGCYRGLRHRKGLPVRGQRSKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269925856|ref|YP_003322479.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798]
 gi|269789516|gb|ACZ41657.1| ribosomal protein S13 [Thermobaculum terrenum ATCC BAA-798]
          Length = 124

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/121 (60%), Positives = 87/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG  SS+ I  K  + P+ RV  L E EV +IR  I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYIYGIGPTSSKKILEKTGVNPDTRVKDLTEDEVARIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR VA NI+RL+++GCYRG+RHRR LPV GQRT TNAR R+   K   AR
Sbjct: 61  EHEYVVEGDLRREVAQNIRRLIEIGCYRGIRHRRNLPVHGQRTRTNARQRRGPRKTVGAR 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|296119327|ref|ZP_06837895.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306]
 gi|295967719|gb|EFG80976.1| 30S ribosomal protein S13 [Corynebacterium ammoniagenes DSM 20306]
          Length = 122

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPSRSKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EASFKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238916289|ref|YP_002929806.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC
           27750]
 gi|259494676|sp|C4Z2V4|RS13_EUBE2 RecName: Full=30S ribosomal protein S13
 gi|238871649|gb|ACR71359.1| small subunit ribosomal protein S13 [Eubacterium eligens ATCC
           27750]
          Length = 124

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG   +  I  +  + P+ RV  L + EV +I + I
Sbjct: 1   MARISGVDLPREKRIEIGLTYVYGIGRVRASKILEEAGVNPDTRVKDLTDEEVAKIAKVI 60

Query: 61  EQD--YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           + D  + VEGDLRR VAMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART K   K   
Sbjct: 61  DADPEHLVEGDLRREVAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNARTCKGPKKTVA 120

Query: 119 ARKR 122
            +K+
Sbjct: 121 NKKK 124


>gi|290968218|ref|ZP_06559761.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L]
 gi|290781700|gb|EFD94285.1| 30S ribosomal protein S13 [Megasphaera genomosp. type_1 str. 28L]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG  SSQ+I  K  I P+ RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIFGIGLSSSQEILKKTGINPDTRVRDLTEDEVQKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y+VEGDLRR  AMN+KRL+++  YRG RHR GLPVRGQR+ TNARTRK   K    +
Sbjct: 61  GSEYKVEGDLRREGAMNVKRLIEINSYRGKRHRAGLPVRGQRSKTNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|284049233|ref|YP_003399572.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731]
 gi|283953454|gb|ADB48257.1| 30S ribosomal protein S13 [Acidaminococcus fermentans DSM 20731]
          Length = 121

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEYALPYIYGIGLTLSREILAKTGINPDTRVRDLTEAEIAKLREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR  ++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK   K   A+
Sbjct: 61  DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKKVAGAK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|188584862|ref|YP_001916407.1| SSU ribosomal protein S13P [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|226712768|sp|B2A4P7|RS13_NATTJ RecName: Full=30S ribosomal protein S13
 gi|179349549|gb|ACB83819.1| SSU ribosomal protein S13P [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 121

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   +++I  +  +  + RV  L E EV ++R  I
Sbjct: 1   MARIAGVDLPRNKRVAIGLTYIYGIGHSKAEEIVEQTGVSTDTRVKDLTEDEVNRLRSTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR ++MNIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK   +   A+
Sbjct: 61  DNDYTVEGDLRREISMNIKRLMEIGCYRGLRHRRGLPVRGQSTKNNARTRKGPKRTVGAK 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|251772515|gb|EES53081.1| ribosomal protein S13 [Leptospirillum ferrodiazotrophum]
          Length = 124

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KR+  AL YI G+G  +SQ I  K  + P+ RVH L + EV ++R+A+
Sbjct: 1   MARIVGIDLPRNKRIEIALTYIFGVGKPTSQLILKKAGVNPDTRVHALTDDEVAKLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E    VEGDLRR ++ NIKR MD+GCY+GLRHR+GLPVRGQRT TNARTRK   KG  A+
Sbjct: 61  ETTCSVEGDLRREISQNIKRKMDIGCYQGLRHRKGLPVRGQRTKTNARTRKGPKKGIGAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|49474382|ref|YP_032424.1| 30S ribosomal protein S13 [Bartonella quintana str. Toulouse]
 gi|81646970|sp|Q6FZE4|RS13_BARQU RecName: Full=30S ribosomal protein S13
 gi|49239886|emb|CAF26284.1| 30s ribosomal protein s13 [Bartonella quintana str. Toulouse]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +Q+I  K+ IP  RRV +L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPRFAQEITKKVGIPVGRRVCELSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y+VEGDLRR VA+N+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DQGYKVEGDLRREVAVNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227497206|ref|ZP_03927454.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
 gi|226833337|gb|EEH65720.1| ribosomal protein S13 [Actinomyces urogenitalis DSM 15434]
          Length = 124

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++ +R  I
Sbjct: 1   MARISGVDLPREKRVEVALTYIFGIGRTRAHETLAATGVNPDTRVKDLSEDELVLLRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK   +    +
Sbjct: 61  DANYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154507839|ref|ZP_02043481.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC
           17982]
 gi|293190234|ref|ZP_06608730.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315605924|ref|ZP_07880955.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|153797473|gb|EDN79893.1| hypothetical protein ACTODO_00321 [Actinomyces odontolyticus ATCC
           17982]
 gi|292821050|gb|EFF80003.1| 30S ribosomal protein S13 [Actinomyces odontolyticus F0309]
 gi|315312206|gb|EFU60292.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 132

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E E++++R  I
Sbjct: 9   MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 68

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 69  EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 128

Query: 121 KR 122
           K+
Sbjct: 129 KK 130


>gi|163796897|ref|ZP_02190854.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199]
 gi|159177886|gb|EDP62435.1| 30S ribosomal protein S13 [alpha proteobacterium BAL199]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVNIP  KRVV AL YIHGIG  ++  IC+ + +P ERRVH+L E E+ ++R++I
Sbjct: 1   MARISGVNIPTQKRVVIALTYIHGIGRTTASRICSSVGVPAERRVHELTEDELSRLRESI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AM+IKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADLIVEGDLRRQTAMSIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|260893347|ref|YP_003239444.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
 gi|260865488|gb|ACX52594.1| 30S ribosomal protein S13 [Ammonifex degensii KC4]
          Length = 123

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 72/123 (58%), Positives = 94/123 (76%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG  S++ I  K  + P+ RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDLPKDKRVEIALTYIYGIGRSSAKKILEKTGVNPDTRVKDLTEDEIARIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR +AMNI+RL+D+ CYRG+RH RGLPVRGQRT TNARTRK   +  GV 
Sbjct: 61  DKEYKVEGDLRREIAMNIRRLIDIRCYRGIRHIRGLPVRGQRTRTNARTRKGPRRTVGVK 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|302205541|gb|ADL09883.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis C231]
 gi|308275777|gb|ADO25676.1| 30S ribosomal protein S13 [Corynebacterium pseudotuberculosis I19]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +  +  +  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAAQLLKETGISPDLRTDNLTDEQVSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|182418811|ref|ZP_02950076.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521]
 gi|237666810|ref|ZP_04526795.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377308|gb|EDT74869.1| ribosomal protein S13p/S18e [Clostridium butyricum 5521]
 gi|237658009|gb|EEP55564.1| 30S ribosomal protein S13 [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+G+G  +SQ I     I P+ R+  L E EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGVGLSTSQKILATTGINPDTRIKDLSEEEVNEIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  VEGDLRR VA+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  NKNLIVEGDLRRDVALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|308070949|ref|YP_003872554.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681]
 gi|310644174|ref|YP_003948933.1| 30S ribosomal protein s13 [Paenibacillus polymyxa SC2]
 gi|305860228|gb|ADM72016.1| 30S ribosomal protein S13 [Paenibacillus polymyxa E681]
 gi|309249125|gb|ADO58692.1| 30S ribosomal protein S13 [Paenibacillus polymyxa SC2]
          Length = 122

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I  +  I    RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKILKETGISANTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKEVKVEGDLRREISLNIKRLTEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|210623212|ref|ZP_03293651.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275]
 gi|210153749|gb|EEA84755.1| hypothetical protein CLOHIR_01601 [Clostridium hiranonis DSM 13275]
          Length = 149

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/113 (56%), Positives = 83/113 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I P+ R+  L E EV ++R+ I
Sbjct: 27  MARIAGVDLPREKRAEIGLTYIYGIGKATSNEILAKAGINPDTRIKDLSEDEVNELRKII 86

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP RGQ+T TNARTRK  
Sbjct: 87  DEDFLVEGDLRREIALNIKRLRDIKCYRGIRHMKGLPCRGQKTKTNARTRKGP 139


>gi|183221325|ref|YP_001839321.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911416|ref|YP_001962971.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|226712754|sp|B0SA23|RS13_LEPBA RecName: Full=30S ribosomal protein S13
 gi|226712755|sp|B0SSF5|RS13_LEPBP RecName: Full=30S ribosomal protein S13
 gi|167776092|gb|ABZ94393.1| 30S Ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779747|gb|ABZ98045.1| 30S ribosomal protein S13 [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 125

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+V  L YI GIG  SSQ+I  K  I    RV  L +     IR+ I
Sbjct: 1   MARIAGVDLPSNKRIVIGLTYIFGIGKTSSQNILKKAGIDESIRVKDLSDEHEAAIRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ YQVEGDLR  V +NIKRLMD+GCYRG RHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EESYQVEGDLRSEVNLNIKRLMDVGCYRGFRHRRGLPVNGQRTRTNARTRKGVKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225571579|ref|ZP_03780575.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM
           15053]
 gi|225159656|gb|EEG72275.1| hypothetical protein CLOHYLEM_07677 [Clostridium hylemonae DSM
           15053]
          Length = 170

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I ++  + P+ R   L + +V +I   I
Sbjct: 49  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILSEAGVSPDIRCRDLTDEDVKKISAVI 108

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 109 DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 168

Query: 121 KR 122
           K+
Sbjct: 169 KK 170


>gi|300779799|ref|ZP_07089655.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030]
 gi|300533909|gb|EFK54968.1| 30S ribosomal protein S13 [Corynebacterium genitalium ATCC 33030]
          Length = 122

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKELLEKTGISPDLRTDNLTDDQVAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENSWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254503181|ref|ZP_05115332.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11]
 gi|222439252|gb|EEE45931.1| ribosomal protein S13p/S18e [Labrenzia alexandrii DFL-11]
          Length = 126

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 84/121 (69%), Positives = 97/121 (80%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRVV AL YIHGIG K +Q+I  K +I   RRV++L ++EV+QIR+ I+
Sbjct: 6   ARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIVEKNSIDAARRVNELSDAEVLQIRETID 65

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 66  RDYMVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 125

Query: 122 R 122
           +
Sbjct: 126 K 126


>gi|58038833|ref|YP_190797.1| 30S ribosomal protein S13 [Gluconobacter oxydans 621H]
 gi|81352519|sp|Q5FU05|RS13_GLUOX RecName: Full=30S ribosomal protein S13
 gi|58001247|gb|AAW60141.1| SSU ribosomal protein S13P [Gluconobacter oxydans 621H]
          Length = 125

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL Y++GIG  ++Q ICNKL IP  +RV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALRYVYGIGPSTAQSICNKLEIPDAKRVNELSDDEIVKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + +VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK        +
Sbjct: 61  DSELRVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225016260|ref|ZP_03705452.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum
           DSM 5476]
 gi|224950935|gb|EEG32144.1| hypothetical protein CLOSTMETH_00163 [Clostridium methylpentosum
           DSM 5476]
          Length = 122

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG K+++DI     + P+ RV  L E E  ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVALTYIFGIGQKTAKDIIAATGVNPDTRVRDLTEDEASKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR VA+NIKRL+++ CYRG RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DKNLMVEGDLRRDVALNIKRLIEINCYRGTRHRKGLPVRGQKTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329889149|ref|ZP_08267492.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568]
 gi|328844450|gb|EGF94014.1| 30S ribosomal protein S13 [Brevundimonas diminuta ATCC 11568]
          Length = 122

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  ++++I  K+ I P RRV+QL ++E++QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVEIALQYIHGIGAHNAKEITAKIGIEPARRVNQLTDAEILQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|57239315|ref|YP_180451.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58579281|ref|YP_197493.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58617335|ref|YP_196534.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel]
 gi|75356679|sp|Q5FFR9|RS13_EHRRG RecName: Full=30S ribosomal protein S13
 gi|81352862|sp|Q5HAU3|RS13_EHRRW RecName: Full=30S ribosomal protein S13
 gi|57161394|emb|CAH58318.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416947|emb|CAI28060.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Gardel]
 gi|58417907|emb|CAI27111.1| 30S ribosomal protein S13 [Ehrlichia ruminantium str. Welgevonden]
          Length = 123

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIYGIGISLANKICESCNIDHNIRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   +  VA 
Sbjct: 61  RENYVVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSRLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|161485990|ref|NP_737179.2| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
 gi|32363329|sp|Q8FS35|RS13_COREF RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312793914|ref|YP_004026837.1| 30S ribosomal protein s13 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312877390|ref|ZP_07737355.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795864|gb|EFR12228.1| 30S ribosomal protein S13 [Caldicellulosiruptor lactoaceticus 6A]
 gi|312181054|gb|ADQ41224.1| 30S ribosomal protein S13 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 124

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/123 (57%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVARIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|294085980|ref|YP_003552740.1| 30S ribosomal protein S13 [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665555|gb|ADE40656.1| ribosomal protein S13 [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 122

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG  ++++IC +  +P ERRV+ L E E+ ++R  I
Sbjct: 1   MARIAGVNIPTKKRVEIALTYIHGIGTTTAKNICERAGVPDERRVNDLSEEELTKLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  +MNIKR +DLGC RGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADVLVEGDLRRQTSMNIKRYLDLGCLRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296116711|ref|ZP_06835321.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769]
 gi|295976923|gb|EFG83691.1| 30S ribosomal protein S13 [Gluconacetobacter hansenii ATCC 23769]
          Length = 125

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   +Q IC+KL+IP ERRV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIYGIGATKAQTICDKLSIPGERRVNELSDDEIVKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK        +
Sbjct: 61  DNDYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170738681|ref|YP_001767336.1| 30S ribosomal protein S13 [Methylobacterium sp. 4-46]
 gi|226712763|sp|B0UHU7|RS13_METS4 RecName: Full=30S ribosomal protein S13
 gi|168192955|gb|ACA14902.1| ribosomal protein S13 [Methylobacterium sp. 4-46]
          Length = 122

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|237786337|ref|YP_002907042.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259494670|sp|C4LKZ4|RS13_CORK4 RecName: Full=30S ribosomal protein S13
 gi|237759249|gb|ACR18499.1| 30S ribosomal protein S13 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 122

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG  S++ +  K  I P+ R   L + +V ++R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTSAKQLLEKTEISPDLRTDALTDDQVAKLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EAEYTVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319442998|ref|ZP_07992154.1| 30S ribosomal protein S13 [Corynebacterium variabile DSM 44702]
          Length = 122

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   + ++  K  I P+ R   L + +V  ++  I
Sbjct: 1   MARLAGVDLPRDKRMEVALTYIYGIGPARAAELLEKTGISPDLRSKDLTDEQVSALKDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGTWKVEGDLRREVAADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297623299|ref|YP_003704733.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093]
 gi|297164479|gb|ADI14190.1| 30S ribosomal protein S13 [Truepera radiovictrix DSM 17093]
          Length = 126

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   SQ++  +  + P+ RV  L E+EV ++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEHALPYIYGIGLSRSQEVLAQAGVNPDTRVKDLAEAEVARLREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y+VEGDLRR + +NIKRLMD+G YRGLRHRRGLPVRGQ + TNARTRK   +    +
Sbjct: 61  EKTYKVEGDLRREIQLNIKRLMDIGSYRGLRHRRGLPVRGQSSKTNARTRKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254452139|ref|ZP_05065576.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238]
 gi|198266545|gb|EDY90815.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 238]
          Length = 122

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 79/122 (64%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRV  AL YI GIG  S+Q IC  ++I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTAKRVPIALTYITGIGNTSAQAICEAVSIDVARRVNELSDAEVLAIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +YQVEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK   K    +
Sbjct: 61  DANYQVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|293402525|ref|ZP_06646660.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304039|gb|EFE45293.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 121

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  +++ I  K  I  + RV  L + ++  IR  +
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEQILAKTGISEDIRVKDLTDEQINAIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR VA+NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DS-IKVEGDLRREVALNIKRLMEIGCYRGIRHRKGLPVRGQRTKTNARTRKGPVRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|220917145|ref|YP_002492449.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254811122|sp|B8J884|RS13_ANAD2 RecName: Full=30S ribosomal protein S13
 gi|219954999|gb|ACL65383.1| ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 128

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 72/120 (60%), Positives = 92/120 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  S++ I  +  + P  R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V +
Sbjct: 61  EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLVRK 120


>gi|182679001|ref|YP_001833147.1| 30S ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|226712696|sp|B2IF93|RS13_BEII9 RecName: Full=30S ribosomal protein S13
 gi|182634884|gb|ACB95658.1| ribosomal protein S13 [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 122

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +++IC K++IPPERRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGPKKAEEICEKVSIPPERRVVDLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226309833|ref|YP_002769727.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599]
 gi|254811132|sp|C0ZIK5|RS13_BREBN RecName: Full=30S ribosomal protein S13
 gi|226092781|dbj|BAH41223.1| 30S ribosomal protein S13 [Brevibacillus brevis NBRC 100599]
          Length = 122

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ I +   +    RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVALTYIFGIGRPTSQKILSATGVDMNTRVRDLTEDEVNKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRLM++GC+RG+RHRRGLPVRGQR+ TNARTRK   +    +
Sbjct: 61  DKTVKVEGDLRREISLNIKRLMEIGCFRGIRHRRGLPVRGQRSKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|111023122|ref|YP_706094.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226365621|ref|YP_002783404.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
 gi|123045552|sp|Q0S3F0|RS13_RHOSR RecName: Full=30S ribosomal protein S13
 gi|254811162|sp|C1B038|RS13_RHOOB RecName: Full=30S ribosomal protein S13
 gi|110822652|gb|ABG97936.1| 30S ribosomal protein S13 [Rhodococcus jostii RHA1]
 gi|226244111|dbj|BAH54459.1| 30S ribosomal protein S13 [Rhodococcus opacus B4]
          Length = 124

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I +   + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325282665|ref|YP_004255206.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP]
 gi|324314474|gb|ADY25589.1| 30S ribosomal protein S13 [Deinococcus proteolyticus MRP]
          Length = 125

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  I  + R+  L E+E   +R AI
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTRSREILERTGINADTRIKDLSEAEQSTLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y+VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  EKTYKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQKTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|315925230|ref|ZP_07921444.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621464|gb|EFV01431.1| 30S ribosomal protein S13 [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 122

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S++I  +L I P  R   L E EV  +R  +
Sbjct: 1   MARIAGVDLPRNKRVEVGLTYIYGIGRSTSKEILAELKIDPNTRCKDLTEDEVNSLRNIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR V +NIKRL+++G YRG RHRRGLPVRGQ+T TNARTRK   +     
Sbjct: 61  DEKYTVEGDLRREVNLNIKRLIEIGSYRGYRHRRGLPVRGQKTKTNARTRKGPKRTVGRS 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325068057|ref|ZP_08126730.1| 30S ribosomal protein S13 [Actinomyces oris K20]
          Length = 124

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I
Sbjct: 1   MARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK   +    +
Sbjct: 61  DGNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|229829401|ref|ZP_04455470.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM
           14600]
 gi|229791832|gb|EEP27946.1| hypothetical protein GCWU000342_01491 [Shuttleworthia satelles DSM
           14600]
          Length = 122

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  +     + P+ RV  L + EV +I  AI
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRASSDAVLASANVDPDTRVKDLTDDEVKRISNAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+   VEGDLRR  A++IKRL ++GCYRG RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  EETLTVEGDLRRQTALDIKRLQEIGCYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|197303836|ref|ZP_03168872.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC
           29176]
 gi|197297129|gb|EDY31693.1| hypothetical protein RUMLAC_02575 [Ruminococcus lactaris ATCC
           29176]
          Length = 127

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P+ RV  L   EV +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSADRILKDAGVNPDTRVRDLTSEEVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 66  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 125

Query: 121 KR 122
           K+
Sbjct: 126 KK 127


>gi|154483164|ref|ZP_02025612.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC
           27560]
 gi|149735972|gb|EDM51858.1| hypothetical protein EUBVEN_00865 [Eubacterium ventriosum ATCC
           27560]
          Length = 127

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS+ I  +  + P+ R   L + EV +I   I
Sbjct: 6   MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILTEAGVNPDTRCKDLTDDEVKKISDVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +    VEGDLRR +A+NIKRL ++GCYRG+RHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 66  DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRRGLPVRGQNTKNNARTRKGPKRTVANK 125

Query: 121 KR 122
           K+
Sbjct: 126 KK 127


>gi|146297260|ref|YP_001181031.1| 30S ribosomal protein S13 [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166231904|sp|A4XLQ5|RS13_CALS8 RecName: Full=30S ribosomal protein S13
 gi|145410836|gb|ABP67840.1| SSU ribosomal protein S13P [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 124

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 70/123 (56%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI GIG   S+ I     + P +RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRIEIALTYIFGIGLSRSKQILRDTGVDPNKRVKDLTDDEVAKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++++VEG+LR  +A NIKRL+D+ CYRGLRH RGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DKNFKVEGELRAEIARNIKRLIDIRCYRGLRHLRGLPVRGQRTRTNARTRKGPRKTVGVM 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|162136028|ref|YP_533285.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB18]
 gi|158706368|sp|Q211H0|RS13_RHOPB RecName: Full=30S ribosomal protein S13
          Length = 122

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ I  ++RV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEILEKVKIADDKRVNQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|303233092|ref|ZP_07319765.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4]
 gi|308233882|ref|ZP_07664619.1| SSU ribosomal protein S13P [Atopobium vaginae DSM 15829]
 gi|328943589|ref|ZP_08241054.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829]
 gi|302480677|gb|EFL43764.1| 30S ribosomal protein S13 [Atopobium vaginae PB189-T1-4]
 gi|327491558|gb|EGF23332.1| 30S ribosomal protein S13 [Atopobium vaginae DSM 15829]
          Length = 123

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++G+G   +  +C +  I P+ RV  L E EV ++R  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGVGQTRATKVCAETGINPDTRVKDLTEDEVTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++  EGDLRR V  N  RLM++GCYRGLRHR+GLPVRGQRTHTNARTRK   +   A+
Sbjct: 61  DANFTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGKRRQIGAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149922190|ref|ZP_01910628.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1]
 gi|149816930|gb|EDM76415.1| 30S ribosomal protein S13 [Plesiocystis pacifica SIR-1]
          Length = 123

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI+G+G  +SQ+I  K  +    R   L E ++  IR+ I
Sbjct: 1   MARISGVDLPRNKRVEIALTYIYGVGRTTSQEILVKAGVGGSIRTDDLNEEQLSAIRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY+VEGDLRR V   IKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  ESDYKVEGDLRREVQTKIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPKRGQVAM 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|320533219|ref|ZP_08033933.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|326773988|ref|ZP_08233270.1| 30S ribosomal protein S13 [Actinomyces viscosus C505]
 gi|320134569|gb|EFW26803.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|326636127|gb|EGE37031.1| 30S ribosomal protein S13 [Actinomyces viscosus C505]
          Length = 136

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/121 (50%), Positives = 83/121 (68%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I+
Sbjct: 14  ARISGVDLPREKRVEIALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVKLRTHID 73

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK   +    +K
Sbjct: 74  GNYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGKK 133

Query: 122 R 122
           +
Sbjct: 134 K 134


>gi|172040038|ref|YP_001799752.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
 gi|226712722|sp|B1VEX9|RS13_CORU7 RecName: Full=30S ribosomal protein S13
 gi|171851342|emb|CAQ04318.1| 30S ribosomal protein S13 [Corynebacterium urealyticum DSM 7109]
          Length = 122

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLSDEQLAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENNWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291549396|emb|CBL25658.1| 30S ribosomal protein S13 [Ruminococcus torques L2-14]
          Length = 122

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S++ I     + P+ RV  L   EV +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSAERILKDAGVNPDTRVRDLTSEEVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR + +NIKRL ++GCYRG+RHR+GLPVRGQ+T TNART K   +    +
Sbjct: 61  DETQVVEGDLRREIQLNIKRLKEIGCYRGIRHRKGLPVRGQKTKTNARTCKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|169830461|ref|YP_001716443.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C]
 gi|226712730|sp|B1I1M4|RS13_DESAP RecName: Full=30S ribosomal protein S13
 gi|169637305|gb|ACA58811.1| ribosomal protein S13 [Candidatus Desulforudis audaxviator MP104C]
          Length = 123

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 71/123 (57%), Positives = 94/123 (76%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV  AL YI+GIG  S++ +  ++ + PE RV  L E E+ ++R  I
Sbjct: 1   MARISGVDLPRDKRVEVALTYIYGIGRSSAKQLLEQVNVNPETRVRDLTEEEISRLRDLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR V++NIKRL+++G YRGLRHRRGLPV GQRT TNARTRK   K  GV 
Sbjct: 61  DKEYKVEGDLRREVSLNIKRLIEIGSYRGLRHRRGLPVWGQRTRTNARTRKGPKKTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|118591159|ref|ZP_01548558.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614]
 gi|118436235|gb|EAV42877.1| 30S ribosomal protein S13 [Stappia aggregata IAM 12614]
          Length = 126

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 83/121 (68%), Positives = 95/121 (78%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRVV AL YIHGIG K +Q+I  K  I   RRV++L ++EV+ IR+ I+
Sbjct: 6   ARIAGVNIPTNKRVVIALQYIHGIGAKFAQEIIEKNNIDAARRVNELSDAEVLSIRETID 65

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 66  RDYLVEGDLRRETAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 125

Query: 122 R 122
           +
Sbjct: 126 K 126


>gi|154248693|ref|YP_001419651.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2]
 gi|226712806|sp|A7IPP8|RS13_XANP2 RecName: Full=30S ribosomal protein S13
 gi|154162778|gb|ABS69994.1| ribosomal protein S13 [Xanthobacter autotrophicus Py2]
          Length = 122

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++++I  K+ IP ERRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKNAEEIVTKVGIPAERRVNQLTDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|213964843|ref|ZP_03393042.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46]
 gi|213952379|gb|EEB63762.1| 30S ribosomal protein S13 [Corynebacterium amycolatum SK46]
          Length = 122

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   + ++  K  I P+ R   L + +V  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARANELLEKTGISPDLRTDALTDEQVAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|315652329|ref|ZP_07905321.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986]
 gi|315485452|gb|EFU75842.1| 30S ribosomal protein S13 [Eubacterium saburreum DSM 3986]
          Length = 122

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS+ I  +  + P+ RV  L + EV ++ Q I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGLTSSRRILKEANVNPDTRVKDLTDDEVKELAQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  SDTQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKNLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227499171|ref|ZP_03929306.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21]
 gi|226904618|gb|EEH90536.1| 30S ribosomal protein S13 [Acidaminococcus sp. D21]
          Length = 121

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG   S++I  K  I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRDKRVEYALPYIYGIGLTLSREILEKTGINPDTRVRDLTEAEIAKLRELL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR  ++NIKRL+++GCYRG RHR GLPVRGQ T  NARTRK     G  +
Sbjct: 61  DHEYKVEGDLRREESLNIKRLVEIGCYRGRRHRAGLPVRGQNTKNNARTRKGPKNVGGKK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|255326869|ref|ZP_05367945.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296]
 gi|283457574|ref|YP_003362157.1| 30S ribosomal protein S13 [Rothia mucilaginosa DY-18]
 gi|255296086|gb|EET75427.1| 30S ribosomal protein S13 [Rothia mucilaginosa ATCC 25296]
 gi|283133572|dbj|BAI64337.1| ribosomal protein S13 [Rothia mucilaginosa DY-18]
          Length = 122

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   + +      + P+ RV  L + E++ +R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGKTRAHETLAATGVNPDTRVKDLTDQELVALRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|239623372|ref|ZP_04666403.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522338|gb|EEQ62204.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 122

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKKLATII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K   K    +
Sbjct: 61  AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|166031633|ref|ZP_02234462.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC
           27755]
 gi|166028610|gb|EDR47367.1| hypothetical protein DORFOR_01333 [Dorea formicigenerans ATCC
           27755]
          Length = 139

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 18  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAQAGVNPDIRCRDLTDDDVKKISAVI 77

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 78  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 137

Query: 121 KR 122
           K+
Sbjct: 138 KK 139


>gi|73667207|ref|YP_303223.1| 30S ribosomal protein S13 [Ehrlichia canis str. Jake]
 gi|91207702|sp|Q3YRN0|RS13_EHRCJ RecName: Full=30S ribosomal protein S13
 gi|72394348|gb|AAZ68625.1| SSU ribosomal protein S13P [Ehrlichia canis str. Jake]
          Length = 123

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 76/122 (62%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRVVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   K  VA 
Sbjct: 61  RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159901448|ref|YP_001547695.1| 30S ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779]
 gi|226712747|sp|A9B434|RS13_HERA2 RecName: Full=30S ribosomal protein S13
 gi|159894487|gb|ABX07567.1| ribosomal protein S13 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 127

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  +L YI+GIG  +S +I  +  I P  RV  L E EVI++R+ I
Sbjct: 1   MARISGVDIPRNKRVEISLTYIYGIGRTTSTEILARTNINPNVRVKDLTEDEVIRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +QDY VEGDLRR V +NIKRLMD+GCYRG+RHR+GLP+RGQRT TNARTR+      +  
Sbjct: 61  DQDYTVEGDLRRAVQLNIKRLMDIGCYRGIRHRKGLPLRGQRTKTNARTRRGKKGAAIGG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|261415796|ref|YP_003249479.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372252|gb|ACX74997.1| 30S ribosomal protein S13 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302328112|gb|ADL27313.1| ribosomal protein S13 [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 122

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ K V   L  I+G+G  ++  +C +L I   ++   L E E  +IR  +
Sbjct: 1   MARIAGVDLPKNKTVEYGLTAIYGVGLFTANKVCAQLGIDKNKKCDDLTEEEQGKIRHLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEG LR  V +NIKRL D+GCYRG+RHR+GLPVRGQR+ TNARTRK   K    +
Sbjct: 61  EDEYSVEGQLRAEVTLNIKRLQDIGCYRGIRHRKGLPVRGQRSRTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226323037|ref|ZP_03798555.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758]
 gi|225208604|gb|EEG90958.1| hypothetical protein COPCOM_00809 [Coprococcus comes ATCC 27758]
          Length = 135

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + EV +I   I
Sbjct: 14  MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILAEAGVNPDTRCRDLTDDEVKKISAVI 73

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 74  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 133

Query: 121 KR 122
           K+
Sbjct: 134 KK 135


>gi|220921921|ref|YP_002497222.1| 30S ribosomal protein S13 [Methylobacterium nodulans ORS 2060]
 gi|254811155|sp|B8IT33|RS13_METNO RecName: Full=30S ribosomal protein S13
 gi|219946527|gb|ACL56919.1| ribosomal protein S13 [Methylobacterium nodulans ORS 2060]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVAMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|253580645|ref|ZP_04857909.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848016|gb|EES75982.1| 30S ribosomal protein S13p/S18e [Ruminococcus sp. 5_1_39BFAA]
 gi|291548008|emb|CBL21116.1| 30S ribosomal protein S13 [Ruminococcus sp. SR1/5]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  K  + P+ RV  L + EV ++   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRPSADKILAKAEVNPDTRVRDLTDDEVKRLSAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227487077|ref|ZP_03917393.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227541759|ref|ZP_03971808.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227093151|gb|EEI28463.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182465|gb|EEI63437.1| 30S ribosomal protein S13 [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAKKLLEETGISPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EASWKVEGDLRRQVAADIRRKIEIGCYQGMRHRRGLPVHGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225020481|ref|ZP_03709673.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305679948|ref|ZP_07402758.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266]
 gi|224946870|gb|EEG28079.1| hypothetical protein CORMATOL_00488 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660568|gb|EFM50065.1| 30S ribosomal protein S13 [Corynebacterium matruchotii ATCC 14266]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLKETGISPDLRTDNLTDEQIASLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|160881760|ref|YP_001560728.1| ribosomal protein S13 [Clostridium phytofermentans ISDg]
 gi|189040498|sp|A9KJG9|RS13_CLOPH RecName: Full=30S ribosomal protein S13
 gi|160430426|gb|ABX43989.1| ribosomal protein S13 [Clostridium phytofermentans ISDg]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG  SS  I  K  + P+ RV  L + EV +IR  I
Sbjct: 1   MARISGVDLPREKRIEIGLTYVYGIGRVSSNRILAKAGVNPDTRVRDLTDEEVAKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETMLVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302876508|ref|YP_003845141.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
 gi|307687180|ref|ZP_07629626.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
 gi|302579365|gb|ADL53377.1| 30S ribosomal protein S13 [Clostridium cellulovorans 743B]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KRV  AL YI+GIG  +SQ I ++  + P+ RV  L E EV  +R  I
Sbjct: 1   MARIAGIDIPKEKRVEIALTYIYGIGLPTSQRILSETGVNPDTRVKNLTEDEVNLLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR +A+NIKRL+++GCYRG+RHRR LPVRGQ+T TNARTRK   K    +
Sbjct: 61  NKTVKVEGDLRREIALNIKRLVEIGCYRGIRHRRNLPVRGQKTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|315497995|ref|YP_004086799.1| 30S ribosomal protein s13 [Asticcacaulis excentricus CB 48]
 gi|315416007|gb|ADU12648.1| 30S ribosomal protein S13 [Asticcacaulis excentricus CB 48]
          Length = 122

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG + +++I  K+ I   RRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQQKAKEIVEKVGIEDARRVNSLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|303247015|ref|ZP_07333291.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ]
 gi|302491722|gb|EFL51605.1| 30S ribosomal protein S13 [Desulfovibrio fructosovorans JJ]
          Length = 123

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  ++  I     +   +    L   E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIYGIGRTTALTILEASGVDWTKNSDALTPEETNTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  NIKRLMD+GCYRG RHRRGLP RGQRTHTNARTRK   +G +A+
Sbjct: 61  EANHKVEGDLRRDVTANIKRLMDIGCYRGFRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297567259|ref|YP_003686231.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946]
 gi|296851708|gb|ADH64723.1| 30S ribosomal protein S13 [Meiothermus silvanus DSM 9946]
          Length = 126

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV IPR KRV  AL YI G+G+  +++      + P  RV  L E+EV ++R+ I
Sbjct: 1   MARIAGVEIPRNKRVDVALTYIFGVGWSRAKEALAATNVDPATRVKDLSEAEVARLREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y++EG+LR  +A NIKRLMD+GCYRGLRHRRGLPVRGQRT TNAR+RK   K    +
Sbjct: 61  ENTYKLEGELRAEIAGNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARSRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|304405591|ref|ZP_07387250.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9]
 gi|304345630|gb|EFM11465.1| 30S ribosomal protein S13 [Paenibacillus curdlanolyticus YK9]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +++ I     +  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALQYIFGIGQTTAKKILATTGVDAQTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DKSVKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227549865|ref|ZP_03979914.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078120|gb|EEI16083.1| ribosomal protein S13 [Corynebacterium lipophiloflavum DSM 44291]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEIALTYIYGIGATRSKELLEKTGISPDLRTDNLTDDQLAALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ESSYTVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|283796528|ref|ZP_06345681.1| 30S ribosomal protein S13 [Clostridium sp. M62/1]
 gi|291075942|gb|EFE13306.1| 30S ribosomal protein S13 [Clostridium sp. M62/1]
 gi|295092571|emb|CBK78678.1| 30S ribosomal protein S13 [Clostridium cf. saccharolyticum K10]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASSNRILAEAGVNPDTRVKDLTDDEVKKLAAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  ADTQVVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|332186879|ref|ZP_08388621.1| 30S ribosomal protein S13 [Sphingomonas sp. S17]
 gi|332013212|gb|EGI55275.1| 30S ribosomal protein S13 [Sphingomonas sp. S17]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   +++I  KL I  +RRV  L + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGPAKAKEITAKLNIAADRRVQDLSDQEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|19551796|ref|NP_599798.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|62389451|ref|YP_224853.1| 30S ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|145294732|ref|YP_001137553.1| 30S ribosomal protein S13 [Corynebacterium glutamicum R]
 gi|32363343|sp|Q8NSV6|RS13_CORGL RecName: Full=30S ribosomal protein S13
 gi|158706225|sp|A4QBQ4|RS13_CORGB RecName: Full=30S ribosomal protein S13
 gi|21323326|dbj|BAB97954.1| Ribosomal protein S13 [Corynebacterium glutamicum ATCC 13032]
 gi|41324785|emb|CAF19267.1| RIBOSOMAL PROTEIN S13 [Corynebacterium glutamicum ATCC 13032]
 gi|140844652|dbj|BAF53651.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARSKQLLEETGISPDLRTDNLTDEQIAALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGTWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|309777156|ref|ZP_07672119.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53]
 gi|313897276|ref|ZP_07830820.1| 30S ribosomal protein S13 [Clostridium sp. HGF2]
 gi|308915026|gb|EFP60803.1| 30S ribosomal protein S13 [Erysipelotrichaceae bacterium 3_1_53]
 gi|312957997|gb|EFR39621.1| 30S ribosomal protein S13 [Clostridium sp. HGF2]
          Length = 121

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  +S+ I  K  I  + RV  L E +V  IR  I
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRSTSEKILAKTGISEDIRVKDLTEDQVNAIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  D-GVKVEGDLRREVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPVRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|161610771|ref|NP_948567.2| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009]
 gi|192292014|ref|YP_001992619.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris TIE-1]
 gi|226712784|sp|B3QBV7|RS13_RHOPT RecName: Full=30S ribosomal protein S13
 gi|192285763|gb|ACF02144.1| ribosomal protein S13 [Rhodopseudomonas palustris TIE-1]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|119373301|gb|ABL68894.1| SSU ribosomal protein S13P [Paracoccus denitrificans PD1222]
          Length = 128

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/121 (64%), Positives = 92/121 (76%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  AL YIHGIG K + +I + + I P RRV++L ++EV+QIR+ I+
Sbjct: 8   ARIAGVNIPTGKRVPIALTYIHGIGSKFADEIVSAVGIEPTRRVNELSDAEVLQIREYID 67

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +  VEGDLRR   MNIKRLMDLG YRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 68  ANLTVEGDLRRETQMNIKRLMDLGSYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGKK 127

Query: 122 R 122
           +
Sbjct: 128 K 128


>gi|295109499|emb|CBL23452.1| 30S ribosomal protein S13 [Ruminococcus obeum A2-162]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + +V +I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRASADKILAQAGVNPDIRVRDLTDDDVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETMMVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225376435|ref|ZP_03753656.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
           16841]
 gi|225211811|gb|EEG94165.1| hypothetical protein ROSEINA2194_02077 [Roseburia inulinivorans DSM
           16841]
          Length = 128

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P  R   L + EV +I + I
Sbjct: 7   MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILAEANVDPNTRCRDLTDDEVKRISEVI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +    VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 67  DNTQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 126

Query: 121 KR 122
           K+
Sbjct: 127 KK 128


>gi|323136109|ref|ZP_08071192.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242]
 gi|322399200|gb|EFY01719.1| 30S ribosomal protein S13 [Methylocystis sp. ATCC 49242]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++IC K+ IP ERRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGPKKAEEICEKVNIPAERRVAQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|14278542|pdb|1I94|M Chain M, Crystal Structures Of The Small Ribosomal Subunit With
           Tetracycline, Edeine And If3
 gi|14278563|pdb|1I95|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Edeine
 gi|14278584|pdb|1I96|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With The Translation
           Initiation Factor If3 (C-Terminal Domain)
 gi|14278606|pdb|1I97|M Chain M, Crystal Structure Of The 30s Ribosomal Subunit From
           Thermus Thermophilus In Complex With Tetracycline
 gi|34811541|pdb|1PNS|M Chain M, Crystal Structure Of A Streptomycin Dependent Ribosome
           From E. Coli, 30s Subunit Of 70s Ribosome. This File,
           1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
           Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
 gi|34811597|pdb|1PNX|M Chain M, Crystal Structure Of The Wild Type Ribosome From E. Coli,
           30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
           Only Molecules Of The 30s Ribosomal Subunit. The 50s
           Subunit Is In The Pdb File 1pny.
 gi|56966335|pdb|1VOQ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966388|pdb|1VOS|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966441|pdb|1VOV|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966494|pdb|1VOX|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|56966547|pdb|1VOZ|M Chain M, Crystal Structure Of Five 70s Ribosomes From Escherichia
           Coli In Complex With Protein Y. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Five 70s Ribosomes And Is Described
           In Remark 400.
 gi|149241287|pdb|2E5L|M Chain M, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
           The Shine- Dalgarno Interaction
 gi|170292340|pdb|2R1G|I Chain I, Coordinates Of The Thermus Thermophilus 30s Components
           Neighboring Rbfa As Obtained By Fitting Into The Cryo-Em
           Map Of A 30s-Rbfa Complex
 gi|224510701|pdb|3FIC|M Chain M, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
           And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
           6.4 A Cryo-Em Map. This File Contains The 30s Subunit
           And The Ligands
 gi|226887641|pdb|2ZM6|M Chain M, Crystal Structure Of The Thermus Thermophilus 30s
           Ribosomal Subunit
          Length = 125

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/121 (58%), Positives = 88/121 (72%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +K
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKK 120

Query: 122 R 122
           +
Sbjct: 121 K 121


>gi|330993870|ref|ZP_08317802.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1]
 gi|329759138|gb|EGG75650.1| 30S ribosomal protein S13 [Gluconacetobacter sp. SXCC-1]
          Length = 125

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 81/122 (66%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YI+GIG   +Q IC++L IP ERRV++L + E+ +IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIALRYIYGIGATKAQAICDQLEIPAERRVNELSDDEIGKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK        +
Sbjct: 61  DSNYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300932969|ref|ZP_07148225.1| 30S ribosomal protein S13 [Corynebacterium resistens DSM 45100]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTWKVEGDLRRQVQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|160932175|ref|ZP_02079566.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753]
 gi|156868777|gb|EDO62149.1| hypothetical protein CLOLEP_01010 [Clostridium leptum DSM 753]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG K++ +I     + P+ RV  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPRDKRIEIGLSYIYGIGRKTATEILKATGVNPDTRVRDLTEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + +VEGDLRR VA +IKRL+++GCYRG+RHR+GLPVRGQR+ TNARTRK   K    +
Sbjct: 61  DHNCRVEGDLRRDVAFDIKRLIEIGCYRGVRHRKGLPVRGQRSKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|95930499|ref|ZP_01313235.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684]
 gi|95133539|gb|EAT15202.1| ribosomal protein S13 [Desulfuromonas acetoxidans DSM 684]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  +SQ I ++  +    R   L E+EV QIR+ I
Sbjct: 1   MARIAGIDLPKNKRIEVALTYIYGIGRSTSQHILSQAGVDFSTRSDDLTEAEVGQIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + +VEGDLRR V+MNIKR+MDLG YRGLRHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DDELKVEGDLRREVSMNIKRMMDLGNYRGLRHRRGLPVRGQKTKTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|299135235|ref|ZP_07028426.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2]
 gi|298590212|gb|EFI50416.1| 30S ribosomal protein S13 [Afipia sp. 1NLS2]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGQKNAADIMEKVKIPLDRRVSQLSDAEVLQIREMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|317131395|ref|YP_004090709.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
 gi|315469374|gb|ADU25978.1| 30S ribosomal protein S13 [Ethanoligenens harbinense YUAN-3]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV   L YI GIG KS+ DI     I P+ RV  L E +V  +R  I
Sbjct: 1   MARIAGVNLPNEKRVEIGLTYIFGIGRKSADDIIKATGINPDIRVKDLTEEQVSLLRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DKEYTIEGDLRRRVALNIKRLVEVGCYRGVRHRKGLPVRGQRTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300022563|ref|YP_003755174.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524384|gb|ADJ22853.1| 30S ribosomal protein S13 [Hyphomicrobium denitrificans ATCC 51888]
          Length = 125

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  AL YIHGIG K S++IC K +IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTGKRVEIALRYIHGIGPKFSKEICAKCSIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V  NIKRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK        +
Sbjct: 61  DRDYTVEGDLRREVQTNIKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGKAVPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227832270|ref|YP_002833977.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
 gi|262183874|ref|ZP_06043295.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
 gi|254811143|sp|C3PL35|RS13_CORA7 RecName: Full=30S ribosomal protein S13
 gi|227453286|gb|ACP32039.1| 30S ribosomal protein S13 [Corynebacterium aurimucosum ATCC 700975]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPARAKELLEKTGISPDLRTDNLDDDQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227494570|ref|ZP_03924886.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
 gi|226832304|gb|EEH64687.1| ribosomal protein S13 [Actinomyces coleocanis DSM 15436]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E +++++R+ I
Sbjct: 1   MARIAGVDLPREKRMEIALTYIYGVGRTRAAETLEATGVSPDLRVKDATEEDLVKLREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218135256|ref|ZP_03464060.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990641|gb|EEC56652.1| hypothetical protein BACPEC_03161 [Bacteroides pectinophilus ATCC
           43243]
          Length = 123

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/123 (55%), Positives = 85/123 (69%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  +  + P+ RV  L + EV +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILAEAQVNPDTRVRDLTDEEVAKIRDVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E D   VEGDLRR +AMNIKRL ++GCYRG+RHR+GLP RGQ+T TNART K   K    
Sbjct: 61  ENDNILVEGDLRRDIAMNIKRLKEIGCYRGIRHRKGLPCRGQKTKTNARTCKGPKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|126697666|ref|YP_001086563.1| 30S ribosomal protein S13 [Clostridium difficile 630]
 gi|254973757|ref|ZP_05270229.1| 30S ribosomal protein S13 [Clostridium difficile QCD-66c26]
 gi|255091147|ref|ZP_05320625.1| 30S ribosomal protein S13 [Clostridium difficile CIP 107932]
 gi|255099258|ref|ZP_05328235.1| 30S ribosomal protein S13 [Clostridium difficile QCD-63q42]
 gi|255305041|ref|ZP_05349213.1| 30S ribosomal protein S13 [Clostridium difficile ATCC 43255]
 gi|255312801|ref|ZP_05354384.1| 30S ribosomal protein S13 [Clostridium difficile QCD-76w55]
 gi|255515560|ref|ZP_05383236.1| 30S ribosomal protein S13 [Clostridium difficile QCD-97b34]
 gi|255648655|ref|ZP_05395557.1| 30S ribosomal protein S13 [Clostridium difficile QCD-37x79]
 gi|255654188|ref|ZP_05399597.1| 30S ribosomal protein S13 [Clostridium difficile QCD-23m63]
 gi|260681872|ref|YP_003213157.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
 gi|260685470|ref|YP_003216603.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
 gi|296449773|ref|ZP_06891542.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
 gi|296877837|ref|ZP_06901859.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
 gi|306518778|ref|ZP_07405125.1| 30S ribosomal protein S13 [Clostridium difficile QCD-32g58]
 gi|123174671|sp|Q18CI0|RS13_CLOD6 RecName: Full=30S ribosomal protein S13
 gi|115249103|emb|CAJ66914.1| 30S ribosomal protein S13 [Clostridium difficile]
 gi|260208035|emb|CBA60233.1| 30S ribosomal protein S13 [Clostridium difficile CD196]
 gi|260211486|emb|CBE01623.1| 30S ribosomal protein S13 [Clostridium difficile R20291]
 gi|296261371|gb|EFH08197.1| 30S ribosomal protein S13 [Clostridium difficile NAP08]
 gi|296431137|gb|EFH16962.1| 30S ribosomal protein S13 [Clostridium difficile NAP07]
          Length = 123

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  ++ +I  K  I P+ R+  L E +V ++R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGKATANEILAKAEINPDTRIKDLSEDQVNELRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQRT TNARTRK   K    +
Sbjct: 61  DDDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQRTKTNARTRKGPRKTVSRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226305367|ref|YP_002765325.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229489477|ref|ZP_04383340.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
 gi|259494688|sp|C0ZW51|RS13_RHOE4 RecName: Full=30S ribosomal protein S13
 gi|226184482|dbj|BAH32586.1| 30S ribosomal protein S13 [Rhodococcus erythropolis PR4]
 gi|229323574|gb|EEN89332.1| 30S ribosomal protein S13 [Rhodococcus erythropolis SK121]
          Length = 124

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KR+  AL YI+GIG   S++I +   + P+ R   L + ++ ++R+ I
Sbjct: 1   MARLSGVDLPREKRMEIALTYIYGIGRTRSKEILDATGVSPDLRSKDLSDEDLAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EESLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226356868|ref|YP_002786608.1| 30S ribosomal protein S13 [Deinococcus deserti VCD115]
 gi|259494671|sp|C1CXD7|RS13_DEIDV RecName: Full=30S ribosomal protein S13
 gi|226318858|gb|ACO46854.1| putative 30S ribosomal protein S13 [Deinococcus deserti VCD115]
          Length = 126

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+++  +  I  + RV  L E+E   +R AI
Sbjct: 1   MARVAGVDLPREKRIEIALTYIYGIGLTRSKEVLAQTGISADTRVKNLTEAEQSTLRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ ++VEGDLR  V  NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EKTFKVEGDLRSEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|268316432|ref|YP_003290151.1| 30S ribosomal protein S13 [Rhodothermus marinus DSM 4252]
 gi|262333966|gb|ACY47763.1| ribosomal protein S13 [Rhodothermus marinus DSM 4252]
          Length = 126

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+IP  KR   AL  I+GIG   +++I +++ + P  R     E +  +IR+ I
Sbjct: 1   MPRIAGVDIPLHKRGEIALTAIYGIGKSRAKEILSRVGLDPNTRPKDWTEEQTREIRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+Y VEG LR  + MNIKRLMD+GCYRG+RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  EQEYVVEGQLRAEIQMNIKRLMDIGCYRGIRHRLGLPVRGQRTRTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294010567|ref|YP_003544027.1| ribosomal protein S13 [Sphingobium japonicum UT26S]
 gi|292673897|dbj|BAI95415.1| ribosomal protein S13 [Sphingobium japonicum UT26S]
          Length = 122

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI +KL I   RRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHSRRVQDLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307946309|ref|ZP_07661644.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
 gi|307769973|gb|EFO29199.1| 30S ribosomal protein S13 [Roseibium sp. TrichSKD4]
          Length = 122

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/122 (68%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K +Q+I  K  I   RRV++L ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALQYIHGIGAKFAQEIVEKNNIDAARRVNELSDAEVLSIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRRDTAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|310829559|ref|YP_003961916.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612]
 gi|308741293|gb|ADO38953.1| hypothetical protein ELI_4009 [Eubacterium limosum KIST612]
          Length = 122

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  +L I P+ RV  L E+EV  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIYGIGRPTSNKILKELNINPDTRVKDLTENEVNALRNIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR V +NIKRL+++G YRGLRHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DEKYTVEGDLRREVNLNIKRLIEIGSYRGLRHRRGLPVRGQKTKTNARTRKGPKKTVGRK 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|261338255|ref|ZP_05966139.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
 gi|270276909|gb|EFA22763.1| 30S ribosomal protein S13 [Bifidobacterium gallicum DSM 20093]
          Length = 125

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNDKRIEIALTYIFGVGRTRAKETLAATGINPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  ESNYKIEGDLRREIDADIRRKIQINCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153854995|ref|ZP_01996208.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814]
 gi|149752492|gb|EDM62423.1| hypothetical protein DORLON_02214 [Dorea longicatena DSM 13814]
          Length = 127

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 6   MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDDDVKKISAVI 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 66  DETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 125

Query: 121 KR 122
           K+
Sbjct: 126 KK 127


>gi|258542049|ref|YP_003187482.1| 30S ribosomal protein S13 [Acetobacter pasteurianus IFO 3283-01]
 gi|256633127|dbj|BAH99102.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-01]
 gi|256636184|dbj|BAI02153.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-03]
 gi|256639239|dbj|BAI05201.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-07]
 gi|256642293|dbj|BAI08248.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-22]
 gi|256645348|dbj|BAI11296.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-26]
 gi|256648403|dbj|BAI14344.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-32]
 gi|256651456|dbj|BAI17390.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654447|dbj|BAI20374.1| SSU ribosomal protein S13P [Acetobacter pasteurianus IFO 3283-12]
          Length = 125

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV  L YI+GIG   + +IC  L IP  +RV++L + E++++R+ I
Sbjct: 1   MARIAGVNVPTNKRVVIGLQYIYGIGATKAVEICKALEIPEAKRVNELSDDEILKLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK        +
Sbjct: 61  DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|317485799|ref|ZP_07944663.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6]
 gi|316922905|gb|EFV44127.1| 30S ribosomal protein S13 [Bilophila wadsworthia 3_1_6]
          Length = 122

 Score =  178 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR   AL YI+GIG  ++  I +   +   R +  L   E+ ++R+ +
Sbjct: 1   MARIAGVDLPRGKRADIALTYIYGIGRVTALKILDASGVNWTRGIDDLTAEELNEVRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ Y+VEGDLRR ++MNIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK   +G V +
Sbjct: 61  EQSYKVEGDLRREISMNIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRRGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|266620237|ref|ZP_06113172.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479]
 gi|288868141|gb|EFD00440.1| 30S ribosomal protein S13 [Clostridium hathewayi DSM 13479]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  ADSQMVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|229542179|ref|ZP_04431239.1| ribosomal protein S13 [Bacillus coagulans 36D1]
 gi|229326599|gb|EEN92274.1| ribosomal protein S13 [Bacillus coagulans 36D1]
          Length = 121

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  I  + RV  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAQKILAEAGISEDTRVRDLTEDEVNKIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|297571897|ref|YP_003697671.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595]
 gi|296932244|gb|ADH93052.1| 30S ribosomal protein S13 [Arcanobacterium haemolyticum DSM 20595]
          Length = 124

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   +Q+      + P+ RV  L E ++++++  I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGLTRAQESLAATGVNPDTRVKDLTEDDLVKLKNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DENYKVEGDLRREIQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|85374441|ref|YP_458503.1| 30S ribosomal protein S13 [Erythrobacter litoralis HTCC2594]
 gi|122544188|sp|Q2N9D5|RS13_ERYLH RecName: Full=30S ribosomal protein S13
 gi|84787524|gb|ABC63706.1| ribosomal protein S13 [Erythrobacter litoralis HTCC2594]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/122 (63%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL I   RRV  L + EV+++R+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTTAVKIADKLGIDHARRVQDLTDEEVLRLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D  VEGDLRR  AMNIKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEDLMVEGDLRRETAMNIKRLMDLKSYRGLRHRNGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|68536851|ref|YP_251556.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411]
 gi|260579209|ref|ZP_05847099.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734]
 gi|91207697|sp|Q4JTB9|RS13_CORJK RecName: Full=30S ribosomal protein S13
 gi|68264450|emb|CAI37938.1| 30S ribosomal protein S13 [Corynebacterium jeikeium K411]
 gi|258602695|gb|EEW15982.1| 30S ribosomal protein S13 [Corynebacterium jeikeium ATCC 43734]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++  K  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPREKRMEVALTYIFGIGPARSKELLEKTGISPDLRSKDLTDEQLSALRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENTWKVEGDLRREIQADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296394893|ref|YP_003659777.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
 gi|296182040|gb|ADG98946.1| 30S ribosomal protein S13 [Segniliparus rotundus DSM 44985]
          Length = 124

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     + P+ R   L ++ V Q+R+ I
Sbjct: 1   MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDANVAQLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238922854|ref|YP_002936367.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656]
 gi|259494677|sp|C4ZBU3|RS13_EUBR3 RecName: Full=30S ribosomal protein S13
 gi|238874526|gb|ACR74233.1| ribosomal protein S13p/S18e [Eubacterium rectale ATCC 33656]
 gi|291523754|emb|CBK89341.1| 30S ribosomal protein S13 [Eubacterium rectale DSM 17629]
 gi|291528780|emb|CBK94366.1| 30S ribosomal protein S13 [Eubacterium rectale M104/1]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I     + P  RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVSADRILEAANVDPSTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETMTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254517496|ref|ZP_05129552.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA]
 gi|226911245|gb|EEH96446.1| ribosomal protein S13 [Clostridium sp. 7_2_43FAA]
          Length = 121

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  +S  I  +  + P+ RV  L E EV +IR+ +
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLSTSHKILAETGVNPDTRVRDLTEEEVTKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR VA+NIKRL+++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  -KTLTIEGDLRREVALNIKRLVEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|167759836|ref|ZP_02431963.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704]
 gi|167662455|gb|EDS06585.1| hypothetical protein CLOSCI_02199 [Clostridium scindens ATCC 35704]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  S+  I  +  + P+ R   L + +V +I   I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTSATRILTEAGVNPDIRCRDLTDEDVKKISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +AMNIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302336356|ref|YP_003801563.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084]
 gi|301320196|gb|ADK68683.1| SSU ribosomal protein S13P [Olsenella uli DSM 7084]
          Length = 123

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG  S+  +C +  + P+ RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPREKRVEVGLTYLYGIGQTSATKVCAETGVNPDTRVKDLTEDEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++  EGDLRR V  N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK   +   AR
Sbjct: 61  DANFTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQIGAR 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|160941045|ref|ZP_02088383.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435994|gb|EDP13761.1| hypothetical protein CLOBOL_05938 [Clostridium bolteae ATCC
           BAA-613]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I     + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASSNRILTAAGVNPDTRVKDLTDDEVKKLANTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K   K    +
Sbjct: 61  AETQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|121602910|ref|YP_989019.1| 30S ribosomal protein S13 [Bartonella bacilliformis KC583]
 gi|158706337|sp|A1USR6|RS13_BARBK RecName: Full=30S ribosomal protein S13
 gi|120615087|gb|ABM45688.1| ribosomal protein S13 [Bartonella bacilliformis KC583]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+V AL YIHGIG K +  I  K+ IP ERRVH+L +SE++QIR+ I
Sbjct: 1   MARIAGVNIPTNKRLVIALQYIHGIGEKFAHKIIEKVGIPAERRVHELSDSEILQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DYQVEGDLRR VAM++KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   +    +
Sbjct: 61  DRDYQVEGDLRREVAMSVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPARAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307294933|ref|ZP_07574775.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1]
 gi|306879407|gb|EFN10625.1| 30S ribosomal protein S13 [Sphingobium chlorophenolicum L-1]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ D+ +KL I   RRV  L ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRKTAVDLADKLGIDHSRRVQDLSDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D  VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADLTVEGDLRRETAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|189424434|ref|YP_001951611.1| ribosomal protein S13 [Geobacter lovleyi SZ]
 gi|226712742|sp|B3E854|RS13_GEOLS RecName: Full=30S ribosomal protein S13
 gi|189420693|gb|ACD95091.1| ribosomal protein S13 [Geobacter lovleyi SZ]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR+  AL YI+GIG  ++++I    +I    R  +L E+E+ ++R+ I
Sbjct: 1   MARIAGIDLPKNKRIEIALTYIYGIGRTTAKNILVATSIDGSTRTDKLTEAEIGKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   +    +
Sbjct: 61  DKNVKVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTKTNARTRKGPARTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255526604|ref|ZP_05393511.1| ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|296187293|ref|ZP_06855689.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|255509712|gb|EET86045.1| ribosomal protein S13 [Clostridium carboxidivorans P7]
 gi|296048164|gb|EFG87602.1| 30S ribosomal protein S13 [Clostridium carboxidivorans P7]
          Length = 123

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/113 (56%), Positives = 85/113 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S  I ++  + P+ RV  L E EV  +R  +
Sbjct: 1   MARIAGVDLPKEKRVEIGLTYIYGIGLPTSHKILSETGVNPDIRVKDLSEEEVNALRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            ++ +VEGDLRR +A+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK  
Sbjct: 61  NKNVKVEGDLRREIALNIKRLIEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 113


>gi|164686551|ref|ZP_02210579.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM
           16795]
 gi|164604420|gb|EDQ97885.1| hypothetical protein CLOBAR_00118 [Clostridium bartlettii DSM
           16795]
          Length = 123

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR    L YI+GIG  ++ +I  K  I P+ R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPNEKRAEIGLTYIYGIGRATANEILAKAEINPDTRIKDLSEEEVNTLRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK   K    +
Sbjct: 61  DNDFLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|262203543|ref|YP_003274751.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247]
 gi|262086890|gb|ACY22858.1| 30S ribosomal protein S13 [Gordonia bronchialis DSM 43247]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G  +S++I     + P+ R   L +++V ++R+ I
Sbjct: 1   MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILEGTGLSPDLRAKDLTDADVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260886900|ref|ZP_05898163.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|330839302|ref|YP_004413882.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|260863499|gb|EEX77999.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
 gi|329747066|gb|AEC00423.1| 30S ribosomal protein S13 [Selenomonas sputigena ATCC 35185]
          Length = 124

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +SQ +     + P+ R   L E EV+++R  I
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTTSQKLLKLAGVNPDTRTRDLTEDEVVKLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++  VEGDLRR   M IKRL+D+GCYRG RHR GLPVRGQ T  NARTRK   K    +
Sbjct: 61  DKEAIVEGDLRRERQMAIKRLVDIGCYRGRRHRLGLPVRGQNTKNNARTRKGPRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225387213|ref|ZP_03756977.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme
           DSM 15981]
 gi|225046692|gb|EEG56938.1| hypothetical protein CLOSTASPAR_00965 [Clostridium asparagiforme
           DSM 15981]
          Length = 122

 Score =  178 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I  +  + P+ RV  L + EV ++   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSANRILTEAGVNPDTRVKDLTDDEVKKLATII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +A+NIKRL ++GCYRG+RHR+ LPVRGQ+T TNART K   K    +
Sbjct: 61  ADTQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTCKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291562747|emb|CBL41563.1| 30S ribosomal protein S13 [butyrate-producing bacterium SS3/4]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S+  I     + P+ RV  L + EV  I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRASADRILAAAGVNPDTRVKDLTDDEVKNIAAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +A+NIKRL ++GCYRG+RHR+ LP RGQ+T TNART K   K    +
Sbjct: 61  AETQTVEGDLRREIALNIKRLQEIGCYRGIRHRKSLPCRGQKTKTNARTCKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255324776|ref|ZP_05365890.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum
           SK141]
 gi|311740033|ref|ZP_07713867.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255298251|gb|EET77554.1| 30S ribosomal protein S13 [Corynebacterium tuberculostearicum
           SK141]
 gi|311305106|gb|EFQ81175.1| 30S ribosomal protein S13 [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + ++  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EATWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300857222|ref|YP_003782206.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528]
 gi|300437337|gb|ADK17104.1| 30S ribosomal protein S13 [Clostridium ljungdahlii DSM 13528]
          Length = 125

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  +SQ I  +  + P+ RV  L E EV  +R  +
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLSTSQKILKEAGVNPDTRVKDLTEEEVNSLRNYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  +EGDLRR +A+NIKRL+++G YRG+RHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  -KNVTIEGDLRREIALNIKRLIEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKMVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|329114196|ref|ZP_08242958.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001]
 gi|326696272|gb|EGE47951.1| 30S ribosomal protein S13 [Acetobacter pomorum DM001]
          Length = 125

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRVV  L YI+GIG   + +IC  L IP  +RV++L + E++++R+ I
Sbjct: 1   MARIAGVNVPTNKRVVIGLQYIYGIGATKAAEICKALEIPEAKRVNELSDDEILKVRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR +AMNIKRLMDLGCYRGLRHRRGLPV GQRTHTNARTRK        +
Sbjct: 61  DSKYRVEGDLRREIAMNIKRLMDLGCYRGLRHRRGLPVHGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|261409495|ref|YP_003245736.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
 gi|315649673|ref|ZP_07902757.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
 gi|261285958|gb|ACX67929.1| 30S ribosomal protein S13 [Paenibacillus sp. Y412MC10]
 gi|315274861|gb|EFU38237.1| 30S ribosomal protein S13 [Paenibacillus vortex V453]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI GIG  +SQ +  +  I  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYIFGIGKTTSQKVLKETGINADTRVRDLTEDEVSKLRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR +++NIKRL ++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DGMVKVEGDLRREISLNIKRLTEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257784938|ref|YP_003180155.1| 30S ribosomal protein S13 [Atopobium parvulum DSM 20469]
 gi|257473445|gb|ACV51564.1| ribosomal protein S13 [Atopobium parvulum DSM 20469]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG   +  +CN+  I    RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGIGQTRATKVCNETGIDVNTRVKDLTEEEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y  EGDLRR V  N+ RLM++GCYRGLRHR+GLPV GQRTHTNARTRK   +    +
Sbjct: 61  DANYTTEGDLRREVRQNVARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQVGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170760916|ref|YP_001788795.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|226712720|sp|B1KSJ9|RS13_CLOBM RecName: Full=30S ribosomal protein S13
 gi|169407905|gb|ACA56316.1| 30S ribosomal protein S13 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 123

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KRV   L YI+GIG  +SQ+I     + P+ RV  L E EV  IR  +
Sbjct: 1   MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILEATGVNPDTRVKDLSEEEVNAIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK   +    +
Sbjct: 61  NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGPKRAIGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|88658171|ref|YP_507248.1| 30S ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas]
 gi|123493519|sp|Q2GH35|RS13_EHRCR RecName: Full=30S ribosomal protein S13
 gi|88599628|gb|ABD45097.1| ribosomal protein S13 [Ehrlichia chaffeensis str. Arkansas]
          Length = 123

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+V AL YI+GIG   +  IC    I    RV  L + E+I+IR  I
Sbjct: 1   MARIAGVNIPTNKRIVIALTYIYGIGLSLANRICEGCNIDHNVRVVNLSDDEIIRIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLR+ V+MNIK L D+GCYRGLRHRRGLPVRGQRTHTNA+TRK   K  VA 
Sbjct: 61  RENYIVEGDLRKEVSMNIKFLTDIGCYRGLRHRRGLPVRGQRTHTNAKTRKGRSKLPVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257413860|ref|ZP_04744453.2| 30S ribosomal protein S13 [Roseburia intestinalis L1-82]
 gi|257202000|gb|EEV00285.1| 30S ribosomal protein S13 [Roseburia intestinalis L1-82]
 gi|291537906|emb|CBL11017.1| 30S ribosomal protein S13 [Roseburia intestinalis XB6B4]
          Length = 128

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +I   I
Sbjct: 7   MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 66

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 67  DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 126

Query: 121 KR 122
           K+
Sbjct: 127 KK 128


>gi|217979115|ref|YP_002363262.1| 30S ribosomal protein S13 [Methylocella silvestris BL2]
 gi|254811156|sp|B8EIT3|RS13_METSB RecName: Full=30S ribosomal protein S13
 gi|217504491|gb|ACK51900.1| ribosomal protein S13 [Methylocella silvestris BL2]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++IC K+ IP  RRV +L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGSKKAEEICAKVNIPDARRVSELTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|320094555|ref|ZP_08026321.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978470|gb|EFW10047.1| ribosomal protein S13p/S18e [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 124

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+G+G   + +      + P+ RV    E E++++R  I
Sbjct: 1   MARIAGVDLPREKRLEIALTYIYGVGRTRAAETLAATGVSPDTRVKDATEEELVKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EANFKVEGDLRREVQADIRRKIEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|167645600|ref|YP_001683263.1| 30S ribosomal protein S13 [Caulobacter sp. K31]
 gi|189040494|sp|B0T2E4|RS13_CAUSK RecName: Full=30S ribosomal protein S13
 gi|167348030|gb|ABZ70765.1| ribosomal protein S13 [Caulobacter sp. K31]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/122 (66%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS++DI  K+ I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSARDIVTKVGIDDARRVNQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+ VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DKDFTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291298739|ref|YP_003510017.1| 30S ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728]
 gi|290567959|gb|ADD40924.1| ribosomal protein S13 [Stackebrandtia nassauensis DSM 44728]
          Length = 126

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S + C    I P +RVH+L ++E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRSVETCAATGIDPSKRVHELTDAELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR VA +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EGNYQVEGDLRREVAADIRRKVEIGCYQGIRHRRGLPVHGQRTRTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307244743|ref|ZP_07526844.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
 gi|306491841|gb|EFM63893.1| 30S ribosomal protein S13 [Peptostreptococcus stomatis DSM 17678]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I P+ R+ +L E +V ++R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGINPDTRIKELSEDQVNELRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D+ VEGDLRR +A+NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK   K    +
Sbjct: 61  DEDHLVEGDLRREIALNIKRLRDIKCYRGIRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260438191|ref|ZP_05792007.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
 gi|292809381|gb|EFF68586.1| 30S ribosomal protein S13 [Butyrivibrio crossotus DSM 2876]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  SS  I  +  + P  RV  L + EV +I+  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVSSNRILAEAKVDPNTRVKDLTDEEVGRIKDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +    VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DASQTVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|306835267|ref|ZP_07468299.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726]
 gi|304568860|gb|EFM44393.1| 30S ribosomal protein S13 [Corynebacterium accolens ATCC 49726]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   ++++  K  I P+ R   L + +V  +R AI
Sbjct: 1   MARLAGVDLPRNKRMEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGSWKVEGDLRRQVQADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291535453|emb|CBL08565.1| 30S ribosomal protein S13 [Roseburia intestinalis M50/1]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SS  I     + P+ RV  L + EV +I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRTSSSRILAAANVNPDTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR +A NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DETQLVEGDLRREIAFNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|323483275|ref|ZP_08088665.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum
           WAL-14163]
 gi|323691226|ref|ZP_08105502.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673]
 gi|323403373|gb|EGA95681.1| hypothetical protein HMPREF9474_00414 [Clostridium symbiosum
           WAL-14163]
 gi|323504745|gb|EGB20531.1| 30S ribosomal protein [Clostridium symbiosum WAL-14673]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSTRILAEAGVNPDTRVKDLTDDEVKRIAGVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  AESQTVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|77918339|ref|YP_356154.1| 30S ribosomal protein S13 [Pelobacter carbinolicus DSM 2380]
 gi|91207711|sp|Q3A6M3|RS13_PELCD RecName: Full=30S ribosomal protein S13
 gi|77544422|gb|ABA87984.1| SSU ribosomal protein S13P [Pelobacter carbinolicus DSM 2380]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/122 (61%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL YI+GIG  SSQDI  K  + P  R  +L E+E  QIR  I
Sbjct: 1   MARIAGIDLPRNKRIEVALTYIYGIGRSSSQDILQKAGVDPNTRTDELTEAEAGQIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   QVEGDLRR V  NIKRLMDLGCYRGLRHRRGLPVRGQ+T TNARTRK   K    +
Sbjct: 61  DGQMQVEGDLRRVVTGNIKRLMDLGCYRGLRHRRGLPVRGQKTKTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|304391477|ref|ZP_07373419.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130]
 gi|303295706|gb|EFL90064.1| 30S ribosomal protein S13 [Ahrensia sp. R2A130]
          Length = 122

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR V AL YIHGIG K++ +I  K  IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRTVIALQYIHGIGQKNANEIVTKANIPMERRVNQLTDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADYMVEGDLRRDTSMNIKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|160914537|ref|ZP_02076752.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991]
 gi|158433695|gb|EDP11984.1| hypothetical protein EUBDOL_00543 [Eubacterium dolichum DSM 3991]
          Length = 121

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI+GIG  ++++I  K+ I  + RV  L E +V  IR+ +
Sbjct: 1   MARIAGVDLPRDKRVVVSLTYIYGIGRPTAEEILAKVGISEDIRVKDLSEEQVNAIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DT-IKVEGDLRRDVQLNIKRLMEIGCYRGIRHRRGLPVRGQRTKTNARTRKGPVRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|325678627|ref|ZP_08158237.1| 30S ribosomal protein S13 [Ruminococcus albus 8]
 gi|324109677|gb|EGC03883.1| 30S ribosomal protein S13 [Ruminococcus albus 8]
          Length = 122

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL Y++GIG K++  I  +  + P+ RV  + E +V ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|221195396|ref|ZP_03568451.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626]
 gi|221184583|gb|EEE16975.1| 30S ribosomal protein S13 [Atopobium rimae ATCC 49626]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L Y++GIG   +  IC +  +  + RV  L E EV +IR  I
Sbjct: 1   MARINGVDLPRDKRVEVGLTYLYGIGQTRATKICAETGVNVDTRVKDLTEDEVTKIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y  EGDLRR V  N  RLM++GCYRGLRHR+GLPV GQRTHTNARTRK   +    +
Sbjct: 61  DANYTTEGDLRREVRQNTARLMEIGCYRGLRHRKGLPVHGQRTHTNARTRKGKKRQVGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|241889158|ref|ZP_04776462.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379]
 gi|241864407|gb|EER68785.1| 30S ribosomal protein S13 [Gemella haemolysans ATCC 10379]
          Length = 121

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L E ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTEDQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK   K    +
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|28212157|ref|NP_783101.1| 30S ribosomal protein S13 [Clostridium tetani E88]
 gi|32363299|sp|Q890Q7|RS13_CLOTE RecName: Full=30S ribosomal protein S13
 gi|28204601|gb|AAO37038.1| SSU ribosomal protein S13P [Clostridium tetani E88]
          Length = 123

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG  S++ I  +  + P+ R+  L E EV  +R  I
Sbjct: 1   MARIAGIDLPREKRVEVGLTYIFGIGTSSAKKILKETGVNPDIRIKDLSEEEVNLLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q+ +VEGDLRR VA++IKRL ++G YRG+RHRRGLPVRGQ+T TNARTRK   K  V+R
Sbjct: 61  NQNLKVEGDLRRDVALDIKRLKEIGSYRGIRHRRGLPVRGQKTKTNARTRKGPKKLVVSR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269218965|ref|ZP_06162819.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212076|gb|EEZ78416.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 123

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI+GIG   S +      I P+ RV  L E +++ +++ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIYGIGRTRSAETLAATGISPDVRVRDLTEDQLVALKKHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DENYKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148260917|ref|YP_001235044.1| 30S ribosomal protein S13 [Acidiphilium cryptum JF-5]
 gi|326404315|ref|YP_004284397.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301]
 gi|166231896|sp|A5FZU3|RS13_ACICJ RecName: Full=30S ribosomal protein S13
 gi|146402598|gb|ABQ31125.1| SSU ribosomal protein S13P [Acidiphilium cryptum JF-5]
 gi|325051177|dbj|BAJ81515.1| 30S ribosomal protein S13 [Acidiphilium multivorum AIU301]
          Length = 125

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 78/122 (63%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ +L YI+GIG   +++IC  L I  ++RV+QL E E+++IR+ I
Sbjct: 1   MARIAGVNIPSNKRVLISLRYIYGIGPAKAREICQSLEIGEDKRVNQLSEDEIMKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY+VEGDLRR VAMNIKRL+DLGCYRGLRHR+GLPVRGQRTHTNARTRK        +
Sbjct: 61  DRDYRVEGDLRREVAMNIKRLVDLGCYRGLRHRKGLPVRGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|317054792|ref|YP_004103259.1| 30S ribosomal protein S13 [Ruminococcus albus 7]
 gi|315447061|gb|ADU20625.1| 30S ribosomal protein S13 [Ruminococcus albus 7]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+  AL Y++GIG K++  I  +  + P+ RV  + E +V ++R+ I
Sbjct: 1   MARIAGIDLPRDKRIEVALTYVYGIGQKTATKIIKETGVDPDVRVKDMSEDDVAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDLRRTVA+NIKRL ++GCYRGLRHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DHNLTVEGDLRRTVALNIKRLTEIGCYRGLRHRKGLPVRGQRTKTNARTRKGPVKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|75675578|ref|YP_317999.1| 30S ribosomal protein S13 [Nitrobacter winogradskyi Nb-255]
 gi|85715108|ref|ZP_01046092.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A]
 gi|91207710|sp|Q3SSU4|RS13_NITWN RecName: Full=30S ribosomal protein S13
 gi|74420448|gb|ABA04647.1| SSU ribosomal protein S13P [Nitrobacter winogradskyi Nb-255]
 gi|85698023|gb|EAQ35896.1| 30S ribosomal protein S13 [Nitrobacter sp. Nb-311A]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K++ +I  K+ IP +RRV QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIEKVKIPADRRVSQLTDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|316933549|ref|YP_004108531.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1]
 gi|315601263|gb|ADU43798.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris DX-1]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|328953133|ref|YP_004370467.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109]
 gi|328453457|gb|AEB09286.1| 30S ribosomal protein S13 [Desulfobacca acetoxidans DSM 11109]
          Length = 124

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI+GIG  ++Q I     +    +   L ++E+ +IR  I
Sbjct: 1   MARISGVDLPRNKRMEIALTYIYGIGRTTAQKILQVAEVDGSTKSDNLTDAELTRIRNVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  ++VEGDLRR ++MNIKRLMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  V +
Sbjct: 61  DAHHKVEGDLRREISMNIKRLMDIGCYRGLRHRKSLPVRGQRTHTNARTRKGPRRSVVGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|295396441|ref|ZP_06806603.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970743|gb|EFG46656.1| 30S ribosomal protein S13 [Brevibacterium mcbrellneri ATCC 49030]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G   +     +  + P+ RV  L + E++Q+R  I
Sbjct: 1   MARLAGVDLPREKRVEVALTYIYGVGRTRASQTLTETGVNPDTRVKDLTDDELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGTFKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|223983944|ref|ZP_03634104.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM
           12042]
 gi|223964136|gb|EEF68488.1| hypothetical protein HOLDEFILI_01385 [Holdemania filiformis DSM
           12042]
          Length = 121

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR K VV +L YI+GIG  +++ I  K  I  + RV  L + +V  IRQ +
Sbjct: 1   MARIAGIDIPRDKHVVVSLTYIYGIGSSTAKTILKKCGISEDIRVKDLTDEQVNAIRQEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q  +VEGDLRR   +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  DQ-IKVEGDLRRETQLNIKRLMEIGCYRGVRHRKGLPVRGQRTKTNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163816002|ref|ZP_02207372.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759]
 gi|158448812|gb|EDP25807.1| hypothetical protein COPEUT_02182 [Coprococcus eutactus ATCC 27759]
          Length = 140

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SSQ I  +  + P+ R   L + EV ++ + I
Sbjct: 19  MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 78

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +    VEGDLRR +  NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 79  KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 138

Query: 121 KR 122
           K+
Sbjct: 139 KK 140


>gi|237747387|ref|ZP_04577867.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS]
 gi|229378738|gb|EEO28829.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes HOxBLS]
          Length = 121

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +V  L  I+GIG   ++DIC    + P ++V  L +SE+ ++R+ I
Sbjct: 1   MARIAGVNIPNHQHIVIGLTAIYGIGRPRAEDICAATGVAPTKKVKDLDDSELEKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   + 
Sbjct: 61  DK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|326792581|ref|YP_004310402.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
 gi|326543345|gb|ADZ85204.1| 30S ribosomal protein S13 [Clostridium lentocellum DSM 5427]
          Length = 123

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI GIG  +S+ I  +  I  + R+  L E +V +IR+ I
Sbjct: 1   MARIAGVDLPKNKRVEIGLTYIFGIGRPTSRQILTEAGIDFDTRIKDLTEEQVSKIRELI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+    VEGDLRR +A+NIKRLM++GCYRG+RHRRGLPVRGQ+T TNARTRK   K    
Sbjct: 61  EKLGIIVEGDLRREIALNIKRLMEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|218284161|ref|ZP_03489955.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989]
 gi|218215354|gb|EEC88892.1| hypothetical protein EUBIFOR_02560 [Eubacterium biforme DSM 3989]
          Length = 121

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L YI+GIG  +S+ +  +  I  + RV  L E ++  IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYIYGIGLTTSKKVLEETGISEDVRVKDLTEEQLNAIRKTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++GCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  DA-IKVEGDLRREVQLNIKRLMEIGCYRGMRHRKGLPVRGQRTKTNARTRKGKAKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|149184336|ref|ZP_01862654.1| ribosomal protein S13 [Erythrobacter sp. SD-21]
 gi|148831656|gb|EDL50089.1| ribosomal protein S13 [Erythrobacter sp. SD-21]
          Length = 122

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/122 (60%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG   + +I +KL I    RV  L + E++++R+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTKAVEIADKLGIDHATRVQDLTDEELLRVRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLRR  AMNIKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEEHTVEGDLRRETAMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86749437|ref|YP_485933.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris HaA2]
 gi|123408223|sp|Q2IXN8|RS13_RHOP2 RecName: Full=30S ribosomal protein S13
 gi|86572465|gb|ABD07022.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris HaA2]
          Length = 122

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ +I  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAAEIIEKVKIPVDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329945755|ref|ZP_08293442.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328528203|gb|EGF55181.1| 30S ribosomal protein S13 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 136

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/121 (50%), Positives = 82/121 (67%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI+GV++PR KRV  AL YI GIG   + +      + P+ RV  L E E++++R  I+
Sbjct: 14  ARISGVDLPREKRVEVALTYIFGIGRTRADETLKATGVNPDTRVKDLTEEELVRLRTHID 73

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             YQVEGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK   +    +K
Sbjct: 74  GSYQVEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKRTVAGKK 133

Query: 122 R 122
           +
Sbjct: 134 K 134


>gi|307718228|ref|YP_003873760.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192]
 gi|306531953|gb|ADN01487.1| 30S ribosomal protein S13 [Spirochaeta thermophila DSM 6192]
          Length = 121

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  S++ IC K  IP E +V +L   +V ++RQ I
Sbjct: 1   MARIAGVDLP-NKQIQIALTYIYGIGRASARKICEKTGIPYETKVSELTSDQVQKLRQVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 60  ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|302390982|ref|YP_003826802.1| 30S ribosomal protein S13P [Acetohalobium arabaticum DSM 5501]
 gi|302203059|gb|ADL11737.1| SSU ribosomal protein S13P [Acetohalobium arabaticum DSM 5501]
          Length = 123

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++QDI  +  + P+ RV  L E EV ++R+ I
Sbjct: 1   MARIEGVDLPRDKRVEIGLTYIYGIGRSTAQDIIEEAGLDPDTRVRDLTEEEVAKLRRVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEG+LRR +  +IKRL D+GCYRG+RH+RGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DEEYTVEGELRREIRSDIKRLKDIGCYRGIRHKRGLPVRGQRTRTNARTRKGPKQTVGTK 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|291460742|ref|ZP_06600132.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291416701|gb|EFE90420.1| 30S ribosomal protein S13 [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 122

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  S+  I  +  + P+ RV  L + EV  I   I
Sbjct: 1   MARIAGVDLPREKRIEIGLTYIYGIGRSSADKILRESKVNPDTRVKDLTDDEVKAIANYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  VEGDLRR  A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  AENQMVEGDLRRETALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|18311361|ref|NP_563295.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13]
 gi|110801380|ref|YP_697068.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124]
 gi|110802938|ref|YP_699637.1| 30S ribosomal protein S13 [Clostridium perfringens SM101]
 gi|168205208|ref|ZP_02631213.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987]
 gi|168211879|ref|ZP_02637504.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626]
 gi|168215202|ref|ZP_02640827.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969]
 gi|168216657|ref|ZP_02642282.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239]
 gi|169347160|ref|ZP_02866102.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495]
 gi|182626922|ref|ZP_02954655.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721]
 gi|32363368|sp|Q8XHU8|RS13_CLOPE RecName: Full=30S ribosomal protein S13
 gi|123047165|sp|Q0SQH0|RS13_CLOPS RecName: Full=30S ribosomal protein S13
 gi|123049590|sp|Q0TMS2|RS13_CLOP1 RecName: Full=30S ribosomal protein S13
 gi|18146045|dbj|BAB82085.1| 30S ribosomal protein S13 [Clostridium perfringens str. 13]
 gi|110676027|gb|ABG85014.1| 30S ribosomal protein S13 [Clostridium perfringens ATCC 13124]
 gi|110683439|gb|ABG86809.1| 30S ribosomal protein S13 [Clostridium perfringens SM101]
 gi|169296843|gb|EDS78972.1| ribosomal protein S13 [Clostridium perfringens C str. JGS1495]
 gi|170663261|gb|EDT15944.1| ribosomal protein S13 [Clostridium perfringens E str. JGS1987]
 gi|170710177|gb|EDT22359.1| ribosomal protein S13 [Clostridium perfringens B str. ATCC 3626]
 gi|170713398|gb|EDT25580.1| ribosomal protein S13 [Clostridium perfringens CPE str. F4969]
 gi|177907712|gb|EDT70327.1| ribosomal protein S13 [Clostridium perfringens D str. JGS1721]
 gi|182381222|gb|EDT78701.1| ribosomal protein S13 [Clostridium perfringens NCTC 8239]
          Length = 121

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG  +SQ I     + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGLPTSQKILEVTGVNPDTRVKDLTEEEVNSIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +D  VEGDLRR VA+NIKRL+++G YRG+RHR+GLP+RGQ+T TNARTRK   K    +
Sbjct: 61  -KDLTVEGDLRREVALNIKRLVEIGSYRGIRHRKGLPLRGQKTKTNARTRKGPKKTIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|323700829|ref|ZP_08112741.1| 30S ribosomal protein S13 [Desulfovibrio sp. ND132]
 gi|323460761|gb|EGB16626.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans ND132]
          Length = 123

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   +  I     I        L   +V QIR  I
Sbjct: 1   MARIAGVDLPRNKRIDIALTYIYGIGRTMAMQILETTGIDWTMSSDDLTADDVNQIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR +  NIKRLMD+GCYRGLRHRRGLPVRGQ++ TNARTRK   +  + R
Sbjct: 61  ENNYKVEGDLRREITTNIKRLMDIGCYRGLRHRRGLPVRGQKSKTNARTRKGPRRSVMGR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|260907116|ref|ZP_05915438.1| 30S ribosomal protein S13 [Brevibacterium linens BL2]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +     +  I P+ RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGRTRASQTLTETGISPDTRVKDLSDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +QVEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGTFQVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297618358|ref|YP_003703517.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
 gi|297146195|gb|ADI02952.1| 30S ribosomal protein S13 [Syntrophothermus lipocalidus DSM 12680]
          Length = 123

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 94/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRVV AL YI GIG  S++ I  +  I P+ RV  L E E+ +IR+AI
Sbjct: 1   MARVAGVDLPRDKRVVVALTYIFGIGRSSAEKIVKETGINPDTRVKDLTEEEIAKIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEG+LRR ++MNIKRL+D+GCYRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DRGYKVEGELRREISMNIKRLIDIGCYRGIRHRRGLPVRGQRTRTNARTRKGPRRTVGTK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|85858170|ref|YP_460372.1| 30S ribosomal protein S13 [Syntrophus aciditrophicus SB]
 gi|123515694|sp|Q2LQD2|RS13_SYNAS RecName: Full=30S ribosomal protein S13
 gi|85721261|gb|ABC76204.1| SSU ribosomal protein S13P [Syntrophus aciditrophicus SB]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 92/122 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG   +++I  K  I  + +  +L +SE+  IR  I
Sbjct: 1   MARIAGVDLPKNKRMEIALTYIYGIGRTKAKEILEKAEISFDTKTDELADSEINAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++D++VEGDLRR ++M+IKRLMD+G YRGLRHR+GLPVRGQRTHTNARTRK   +    +
Sbjct: 61  DRDHKVEGDLRRDISMSIKRLMDVGAYRGLRHRKGLPVRGQRTHTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|115525563|ref|YP_782474.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisA53]
 gi|122295429|sp|Q07KP0|RS13_RHOP5 RecName: Full=30S ribosomal protein S13
 gi|115519510|gb|ABJ07494.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisA53]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + DI  K+ IP +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKHAADIVEKVKIPLDRRVNQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYMVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|92117120|ref|YP_576849.1| 30S ribosomal protein S13 [Nitrobacter hamburgensis X14]
 gi|122418085|sp|Q1QN08|RS13_NITHX RecName: Full=30S ribosomal protein S13
 gi|91800014|gb|ABE62389.1| SSU ribosomal protein S13P [Nitrobacter hamburgensis X14]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K++ +I +K+ IP +RRV QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGQKNAAEIIDKVKIPADRRVSQLSDQEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKSIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|315186309|gb|EFU20070.1| SSU ribosomal protein S13P [Spirochaeta thermophila DSM 6578]
          Length = 121

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG  S++ IC +  IP E +V +L   +V ++RQ I
Sbjct: 1   MARIAGVDLP-NKQIQIALTYIYGIGRSSARKICERTGIPYETKVSELTSDQVQKLRQVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEG LR  VA+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 60  ENEYTVEGRLRTQVALNIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|167767779|ref|ZP_02439832.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1]
 gi|317497070|ref|ZP_07955397.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167710518|gb|EDS21097.1| hypothetical protein CLOSS21_02314 [Clostridium sp. SS2/1]
 gi|291558880|emb|CBL37680.1| 30S ribosomal protein S13 [butyrate-producing bacterium SSC/2]
 gi|316895615|gb|EFV17770.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  S++ I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLSSAKRILAEANVDPDTRVRDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +A+NIKRL ++GCYRG RHR+GLP RGQ+T TNARTRK   K    +
Sbjct: 61  NDTQVVEGDLRREIALNIKRLKEIGCYRGKRHRQGLPCRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|119538759|gb|ABL83376.1| SSU ribosomal protein S13P [Nocardioides sp. JS614]
          Length = 140

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +Q +     + P+ RVHQL + E++++R  I
Sbjct: 17  MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++++EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 77  EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAGK 136

Query: 121 KR 122
           K+
Sbjct: 137 KK 138


>gi|317505826|ref|ZP_07963671.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
 gi|316255908|gb|EFV15133.1| 30S ribosomal protein S13 [Segniliparus rugosus ATCC BAA-974]
          Length = 124

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     + P+ R   L + +V  +R+ I
Sbjct: 1   MARLAGVDLPRDKRLEIALTYIYGIGRTKSKEILAATGLSPDLRTKDLTDGDVAVLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  ENSLKVEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|27380489|ref|NP_772018.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110]
 gi|32363304|sp|Q89JA6|RS13_BRAJA RecName: Full=30S ribosomal protein S13
 gi|27353653|dbj|BAC50643.1| 30S ribosomal protein S13 [Bradyrhizobium japonicum USDA 110]
          Length = 122

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ IP +RRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKIAGEILEKVKIPVDRRVSQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302388062|ref|YP_003823884.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1]
 gi|302198690|gb|ADL06261.1| 30S ribosomal protein S13 [Clostridium saccharolyticum WM1]
          Length = 122

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS  I  +  + P+ RV  L + EV +I   I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGRTSSNRILTEAGVNPDTRVKDLTDDEVKRISAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR +AMNIKRL ++GCYRG+RHR+ LPVRGQ+T TNARTRK   K    +
Sbjct: 61  GDSQIVEGDLRREIAMNIKRLQEIGCYRGIRHRKSLPVRGQKTKTNARTRKGPRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148381395|ref|YP_001255936.1| ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502]
 gi|153932993|ref|YP_001385770.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397]
 gi|153937296|ref|YP_001389177.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall]
 gi|153939368|ref|YP_001392808.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland]
 gi|168178858|ref|ZP_02613522.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916]
 gi|168181890|ref|ZP_02616554.1| 30S ribosomal protein S13 [Clostridium botulinum Bf]
 gi|170757214|ref|YP_001783095.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra]
 gi|187776601|ref|ZP_02993074.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC
           15579]
 gi|226950907|ref|YP_002805998.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto]
 gi|237796916|ref|YP_002864468.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657]
 gi|166231909|sp|A7FZ47|RS13_CLOB1 RecName: Full=30S ribosomal protein S13
 gi|166231910|sp|A5I7I0|RS13_CLOBH RecName: Full=30S ribosomal protein S13
 gi|166231911|sp|A7GJ48|RS13_CLOBL RecName: Full=30S ribosomal protein S13
 gi|226712719|sp|B1IGC8|RS13_CLOBK RecName: Full=30S ribosomal protein S13
 gi|254811140|sp|C1FMS5|RS13_CLOBJ RecName: Full=30S ribosomal protein S13
 gi|259494669|sp|C3KVM5|RS13_CLOB6 RecName: Full=30S ribosomal protein S13
 gi|148290879|emb|CAL85015.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 3502]
 gi|152929037|gb|ABS34537.1| 30S ribosomal protein S13 [Clostridium botulinum A str. ATCC 19397]
 gi|152933210|gb|ABS38709.1| 30S ribosomal protein S13 [Clostridium botulinum A str. Hall]
 gi|152935264|gb|ABS40762.1| 30S ribosomal protein S13 [Clostridium botulinum F str. Langeland]
 gi|169122426|gb|ACA46262.1| 30S ribosomal protein S13 [Clostridium botulinum B1 str. Okra]
 gi|182670171|gb|EDT82147.1| ribosomal protein S13 [Clostridium botulinum NCTC 2916]
 gi|182674848|gb|EDT86809.1| 30S ribosomal protein S13 [Clostridium botulinum Bf]
 gi|187775260|gb|EDU39062.1| hypothetical protein CLOSPO_00115 [Clostridium sporogenes ATCC
           15579]
 gi|226843905|gb|ACO86571.1| ribosomal protein S13 [Clostridium botulinum A2 str. Kyoto]
 gi|229261193|gb|ACQ52226.1| 30S ribosomal protein S13 [Clostridium botulinum Ba4 str. 657]
 gi|295320788|gb|ADG01166.1| 30S ribosomal protein S13 [Clostridium botulinum F str. 230613]
 gi|322807780|emb|CBZ05355.1| SSU ribosomal protein S13p (S18e) [Clostridium botulinum H04402
           065]
          Length = 123

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KRV   L YI+GIG  +SQ+I     + P+ RV  L E EV  IR  +
Sbjct: 1   MARISGIDLPKEKRVEIGLTYIYGIGLPTSQEILKATGVNPDTRVKDLSEEEVNAIRDYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEGDLRR + +NIKRL+++G YRG+RHRR LPVRGQ+T TNARTRK   +    +
Sbjct: 61  NKNVKVEGDLRREIKLNIKRLVEIGSYRGIRHRRNLPVRGQKTKTNARTRKGPKRAIGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|219682880|ref|YP_002469263.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620530|gb|ACL28687.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|289178181|gb|ADC85427.1| SSU ribosomal protein S13P [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 136

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 12  MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R + +  Y+G+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 72  ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|183601968|ref|ZP_02963337.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190457|ref|YP_002967851.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195863|ref|YP_002969418.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218853|gb|EDT89495.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240248849|gb|ACS45789.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250417|gb|ACS47356.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793444|gb|ADG32979.1| 30S ribosomal protein S13 [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 125

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLEATGINPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R + +  Y+G+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  ESNYKIEGDLRREVDADIRRKIQINSYQGMRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|187930341|ref|YP_001900828.1| 30S ribosomal protein S13 [Ralstonia pickettii 12J]
 gi|241664509|ref|YP_002982869.1| 30S ribosomal protein S13 [Ralstonia pickettii 12D]
 gi|309782857|ref|ZP_07677577.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA]
 gi|226712780|sp|B2UEJ6|RS13_RALPJ RecName: Full=30S ribosomal protein S13
 gi|187727231|gb|ACD28396.1| ribosomal protein S13 [Ralstonia pickettii 12J]
 gi|240866536|gb|ACS64197.1| ribosomal protein S13 [Ralstonia pickettii 12D]
 gi|308918281|gb|EFP63958.1| 30S ribosomal protein S13 [Ralstonia sp. 5_7_47FAA]
          Length = 121

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    IP +++V  L + +   +R+ I
Sbjct: 1   MARIAGVNIPNHKHTVIGLTAIYGIGRSRAQKICEATGIPTDKKVKDLTDPDQDALRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|295111401|emb|CBL28151.1| SSU ribosomal protein S13P [Synergistetes bacterium SGP1]
          Length = 125

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 87/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+  AL YI GIG  S++ I     + P+ RV  L E +  ++R+ I
Sbjct: 1   MARISGVDLPREKRIEIALTYIFGIGVPSARKILAATGVNPDVRVKDLSEDDAQKLRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y VEGDLRR V+M+IKRLMD+GCYRGLRHR GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  EEHYVVEGDLRREVSMSIKRLMDIGCYRGLRHRLGLPVRGQKTKTNARTRKGKRRTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|291542056|emb|CBL15166.1| SSU ribosomal protein S13P [Ruminococcus bromii L2-63]
          Length = 122

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG K++ DI     + P+ RV  L E ++ ++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRKTADDIIAATGVNPDTRVRDLTEEDIAKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR +A +IKRL+D+GCYRG+RHR+GLPVRGQR+ TNARTRK   K    +
Sbjct: 61  EHHCRVEGDLRRDIAYDIKRLIDIGCYRGVRHRKGLPVRGQRSKTNARTRKGPRKTMANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|169630852|ref|YP_001704501.1| 30S ribosomal protein S13 [Mycobacterium abscessus ATCC 19977]
 gi|226712765|sp|B1MGA2|RS13_MYCA9 RecName: Full=30S ribosomal protein S13
 gi|169242819|emb|CAM63847.1| 30S ribosomal protein S13 [Mycobacterium abscessus]
          Length = 124

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S++I     I PE+R   L + +V Q+R+ I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSKEILAATGISPEQRSKDLTDDQVTQLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EATLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225175649|ref|ZP_03729643.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
 gi|225168978|gb|EEG77778.1| ribosomal protein S13 [Dethiobacter alkaliphilus AHT 1]
          Length = 123

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 76/123 (61%), Positives = 96/123 (78%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+GIG K+SQDI ++ A+  + RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIALTYIYGIGRKTSQDILSQSAVNMDTRVRDLTEDEVNRLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y+VEGDLRR VAMNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   +  GV 
Sbjct: 61  DKNYKVEGDLRREVAMNIKRLMEIGSYRGIRHRRGLPVRGQTTKNNARTRKGPKRTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|269123122|ref|YP_003305699.1| 30S ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
 gi|268314448|gb|ACZ00822.1| ribosomal protein S13 [Streptobacillus moniliformis DSM 12112]
          Length = 121

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   S +I  K  I  + +V  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEVSLTYIYGIGRSISNEILVKAGINRDTKVKDLTEEEVGKIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL D+ CYRGLRHR GLPVRGQ+T TNARTRK   K  VA+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLTDIKCYRGLRHRMGLPVRGQKTKTNARTRKGPAKMAVAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|212637979|ref|YP_002314499.1| 30S ribosomal protein S13 [Anoxybacillus flavithermus WK1]
 gi|226712689|sp|B7GJ92|RS13_ANOFW RecName: Full=30S ribosomal protein S13
 gi|212559459|gb|ACJ32514.1| Ribosomal protein S13 [Anoxybacillus flavithermus WK1]
          Length = 121

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKATAQKILAEAGVSEDTRVRDLTEEELGKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|289706557|ref|ZP_06502907.1| 30S ribosomal protein S13 [Micrococcus luteus SK58]
 gi|289556692|gb|EFD50033.1| 30S ribosomal protein S13 [Micrococcus luteus SK58]
          Length = 122

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++  +   I P  RV  L + +++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLSATGIDPNIRVKDLSDEQLVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|150392134|ref|YP_001322183.1| 30S ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
 gi|166991596|sp|A6TWF6|RS13_ALKMQ RecName: Full=30S ribosomal protein S13
 gi|149951996|gb|ABR50524.1| ribosomal protein S13 [Alkaliphilus metalliredigens QYMF]
          Length = 123

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG ++S  I     I  + R+  L E EV ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEVGLTYIFGIGRQTSNKILAATGINVDTRIKDLTEEEVNELRKLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DYQVEGDLRR V++NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DADYQVEGDLRREVSLNIKRLKEIRCYRGIRHTKGLPVRGQKTKTNARTRKGPKRTVGRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227876169|ref|ZP_03994285.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243]
 gi|269976924|ref|ZP_06183898.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1]
 gi|306819444|ref|ZP_07453151.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239]
 gi|307701694|ref|ZP_07638710.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16]
 gi|227843130|gb|EEJ53323.1| ribosomal protein S13 [Mobiluncus mulieris ATCC 35243]
 gi|269934755|gb|EEZ91315.1| 30S ribosomal protein S13 [Mobiluncus mulieris 28-1]
 gi|304647736|gb|EFM45054.1| 30S ribosomal protein S13 [Mobiluncus mulieris ATCC 35239]
 gi|307613197|gb|EFN92450.1| 30S ribosomal protein S13 [Mobiluncus mulieris FB024-16]
          Length = 124

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +++      + P+ RV  L E E+I++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIYGIGRTRAKETLESTGVSPDTRVKDLTEDELIKLRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNARTRK   +    +
Sbjct: 61  QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294789216|ref|ZP_06754455.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453]
 gi|294482957|gb|EFG30645.1| 30S ribosomal protein S13 [Simonsiella muelleri ATCC 29453]
          Length = 120

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKSICEAAGIAPTTKVKDLNESQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|290958126|ref|YP_003489308.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22]
 gi|260647652|emb|CBG70757.1| 30S ribosomal protein S13 [Streptomyces scabiei 87.22]
          Length = 126

 Score =  177 bits (449), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ+      + P+ RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEVALTYVFGIGRTLSQETLAATGVNPDTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|169335654|ref|ZP_02862847.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258392|gb|EDS72358.1| hypothetical protein ANASTE_02074 [Anaerofustis stercorihominis DSM
           17244]
          Length = 122

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S  +  +  I P+ R+  L E EV ++R  I
Sbjct: 1   MARIAGVDLPKDKRVEIGLTYIYGIGQATSNKLLAEAGINPDTRIKDLSEEEVNKLRSLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++   VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ++ TNARTRK   K    +
Sbjct: 61  DEKVTVEGDLRREVSLNIKRLMEIGTYRGLRHRRGLPVRGQKSKTNARTRKGPKKTVSRK 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|103486060|ref|YP_615621.1| 30S ribosomal protein S13 [Sphingopyxis alaskensis RB2256]
 gi|123380095|sp|Q1GVN4|RS13_SPHAL RecName: Full=30S ribosomal protein S13
 gi|98976137|gb|ABF52288.1| SSU ribosomal protein S13P [Sphingopyxis alaskensis RB2256]
          Length = 122

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 81/122 (66%), Positives = 95/122 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  KRV+ AL YIHGIG K++ DI +KL I   RRV  L ++EV+QIR+ I
Sbjct: 1   MARIAGVNLPTNKRVIIALTYIHGIGRKTAVDIADKLGIDHGRRVQDLSDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + D+ VEGDLRR  AMNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DADHTVEGDLRRNTAMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|23466154|ref|NP_696757.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|46190440|ref|ZP_00121530.2| COG0099: Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|189440593|ref|YP_001955674.1| 30S ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|227546500|ref|ZP_03976549.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239621034|ref|ZP_04664065.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312133898|ref|YP_004001237.1| rpsm [Bifidobacterium longum subsp. longum BBMN68]
 gi|317483426|ref|ZP_07942416.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689905|ref|YP_004209639.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691846|ref|YP_004221416.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|32363330|sp|Q8G3Z5|RS13_BIFLO RecName: Full=30S ribosomal protein S13
 gi|226712697|sp|B3DQD8|RS13_BIFLD RecName: Full=30S ribosomal protein S13
 gi|23326891|gb|AAN25393.1| 30S ribosomal protein S13 [Bifidobacterium longum NCC2705]
 gi|189429028|gb|ACD99176.1| Ribosomal protein S13 [Bifidobacterium longum DJO10A]
 gi|227213049|gb|EEI80928.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|239516135|gb|EEQ56002.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516447|emb|CBK70063.1| SSU ribosomal protein S13P [Bifidobacterium longum subsp. longum
           F8]
 gi|311773192|gb|ADQ02680.1| RpsM [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915112|gb|EFV36544.1| 30S ribosomal protein S13 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456702|dbj|BAJ67324.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320461241|dbj|BAJ71861.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           157F]
          Length = 125

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319654894|ref|ZP_08008969.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2]
 gi|317393457|gb|EFV74220.1| 30S ribosomal protein S13 [Bacillus sp. 2_A_57_CT2]
          Length = 121

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDVPREKRVVISLTYIFGIGKSTAQKVLAEAGVSEDTRVRDLTEDELNKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|237749537|ref|ZP_04580017.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13]
 gi|229380899|gb|EEO30990.1| 30S ribosomal subunit protein S13 [Oxalobacter formigenes OXCC13]
          Length = 121

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +V  L  I GIG   +++IC    + P ++V  L ++++ ++R  I
Sbjct: 1   MARIAGVNIPNHQHIVIGLTAIFGIGRPRAEEICAATGVDPTKKVKDLDDNDLEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   + 
Sbjct: 61  GK-FVIEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|152988309|ref|YP_001346245.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7]
 gi|166231915|sp|A6UZL0|RS13_PSEA7 RecName: Full=30S ribosomal protein S13
 gi|150963467|gb|ABR85492.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PA7]
          Length = 118

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q+IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQNICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-HTTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|81562141|sp|Q6N4V5|RS13_RHOPA RecName: Full=30S ribosomal protein S13; AltName: Full=RRP-S13
 gi|39650146|emb|CAE28669.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris CGA009]
          Length = 128

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 84/121 (69%), Positives = 98/121 (80%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I+
Sbjct: 8   ARIAGVNIPTNKRVLIALQYIHGIGQKNAADILEKVKIPLDRRVNQLSDAEVLQIREVID 67

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 68  RDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKK 127

Query: 122 R 122
           +
Sbjct: 128 K 128


>gi|291457227|ref|ZP_06596617.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
 gi|291381062|gb|EFE88580.1| 30S ribosomal protein S13 [Bifidobacterium breve DSM 20213]
          Length = 125

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|326383229|ref|ZP_08204917.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395]
 gi|326197979|gb|EGD55165.1| 30S ribosomal protein S13 [Gordonia neofelifaecis NRRL B-59395]
          Length = 122

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G  +S++I     +  + R   L +++V ++R+ I
Sbjct: 1   MARVAGVDLPREKRLEIALTYIYGVGRTTSKEILAATGLSADLRAKDLTDADVSKLREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EASVKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVHGQRTKTNARTRKGPKKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|313904926|ref|ZP_07838297.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6]
 gi|313470183|gb|EFR65514.1| 30S ribosomal protein S13 [Eubacterium cellulosolvens 6]
          Length = 123

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/123 (53%), Positives = 84/123 (68%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  +  +  + P+ RV  L + EV  +  AI
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGRTTSTKLLAQAGVNPDTRVRDLTDDEVKSLTNAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+    VEGDLRR +AMNIKRL ++GCYRG RHR GLPVRGQ+T TNARTRK   +    
Sbjct: 61  EELQVTVEGDLRREIAMNIKRLQEIGCYRGKRHRVGLPVRGQKTKTNARTRKGPRRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|269217221|ref|ZP_06161075.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122]
 gi|269129358|gb|EEZ60443.1| 30S ribosomal protein S13 [Slackia exigua ATCC 700122]
          Length = 122

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+   L YI+GIG  S++ I     + P+ RV  + E ++ +IR+ I
Sbjct: 1   MPRLFGVDLPREKRIETGLTYIYGIGDTSAKKIIAATGVNPDIRVKDISEDDLQKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+  +EGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK   +    +
Sbjct: 61  DQNMTIEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|120402444|ref|YP_952273.1| 30S ribosomal protein S13 [Mycobacterium vanbaalenii PYR-1]
 gi|158706254|sp|A1T517|RS13_MYCVP RecName: Full=30S ribosomal protein S13
 gi|119955262|gb|ABM12267.1| SSU ribosomal protein S13P [Mycobacterium vanbaalenii PYR-1]
          Length = 124

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   SQ+I     I  + R   L + +V Q+R  I
Sbjct: 1   MARLMGVDLPRDKRMEIALTYIYGIGRTRSQEILEATGISRDMRTKDLTDDQVTQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|256830516|ref|YP_003159244.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028]
 gi|256579692|gb|ACU90828.1| ribosomal protein S13 [Desulfomicrobium baculatum DSM 4028]
          Length = 123

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG  ++  I +   I   +    L   ++  +R+ +
Sbjct: 1   MARLVGVDLPRNKRLDIALTYIYGIGRATALKILDATGIDWTKNSDDLTSDDINTLRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  ++VEGDLRR +  NIKRLMD+GCYRGLRHRRGLP RGQRTHTNARTRK   +  V +
Sbjct: 61  EASHKVEGDLRREIVANIKRLMDIGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAIVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269122556|ref|YP_003310733.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
 gi|268616434|gb|ACZ10802.1| ribosomal protein S13 [Sebaldella termitidis ATCC 33386]
          Length = 121

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  ++  I  K  +    +V  L E +V QIR  +
Sbjct: 1   MARIAGVDIPRNKRVEISLTYIFGIGRSTANKILEKANVDKNIKVKDLSEEQVGQIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ +++EG+LR+ + +NIKRLMD+  YRGLRHR GLPVRGQ+T TNARTRK   K  VA+
Sbjct: 61  DE-FKIEGELRKEIRLNIKRLMDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKAAVAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|297201754|ref|ZP_06919151.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083]
 gi|197710871|gb|EDY54905.1| 30S ribosomal protein S13 [Streptomyces sviceus ATCC 29083]
          Length = 126

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ    +  I P  RV  L E E++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEVALTYVFGIGRTLSQLTLAETGINPNTRVRDLSEEELVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNLKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312144223|ref|YP_003995669.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus']
 gi|311904874|gb|ADQ15315.1| 30S ribosomal protein S13 [Halanaerobium sp. 'sapolanicus']
          Length = 128

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  +SQ+I    +I P+ RV  L E+E+  +R+ I
Sbjct: 1   MARIEGVDLPRNKRVEIGLTYIYGIGKTTSQNILENTSIDPDTRVKDLTEAEISSLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEG+LRR    +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  DNNYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGIK 120

Query: 121 KR 122
            R
Sbjct: 121 TR 122


>gi|220930990|ref|YP_002507898.1| ribosomal protein S13 [Halothermothrix orenii H 168]
 gi|254811150|sp|B8D0T4|RS13_HALOH RecName: Full=30S ribosomal protein S13
 gi|219992300|gb|ACL68903.1| ribosomal protein S13 [Halothermothrix orenii H 168]
          Length = 122

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/123 (57%), Positives = 89/123 (72%), Gaps = 2/123 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I     I P+ RV  L E+E+ ++R+ +
Sbjct: 1   MARIAGVDLPRNKRVEIGLTYIYGIGRSTSNKILKVTGIDPDTRVKDLTEAEIAKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           ++ YQVEGDLRR +  NIKRLMD+GCYRG+RHR+ LPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DK-YQVEGDLRREIRANIKRLMDIGCYRGIRHRKNLPVRGQRTRTNARTRKGPKKTVGVR 119

Query: 120 RKR 122
           R +
Sbjct: 120 RAK 122


>gi|260589252|ref|ZP_05855165.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
 gi|331082660|ref|ZP_08331783.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260540333|gb|EEX20902.1| 30S ribosomal protein S13 [Blautia hansenii DSM 20583]
 gi|330400279|gb|EGG79921.1| 30S ribosomal protein S13 [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 123

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG  +S  I  K  + P+ RV  + + EV +IR AI
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGRVTSNRILEKAGVNPDTRVRDVTDEEVGKIRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+    VEGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   +    
Sbjct: 61  EELQIPVEGDLRREIALNIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|188581394|ref|YP_001924839.1| 30S ribosomal protein S13 [Methylobacterium populi BJ001]
 gi|226712761|sp|B1Z771|RS13_METPB RecName: Full=30S ribosomal protein S13
 gi|179344892|gb|ACB80304.1| ribosomal protein S13 [Methylobacterium populi BJ001]
          Length = 122

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 86/122 (70%), Positives = 101/122 (82%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|108798082|ref|YP_638279.1| 30S ribosomal protein S13 [Mycobacterium sp. MCS]
 gi|119867178|ref|YP_937130.1| 30S ribosomal protein S13 [Mycobacterium sp. KMS]
 gi|126433742|ref|YP_001069433.1| 30S ribosomal protein S13 [Mycobacterium sp. JLS]
 gi|123179360|sp|Q1BD11|RS13_MYCSS RecName: Full=30S ribosomal protein S13
 gi|158706250|sp|A3PVL5|RS13_MYCSJ RecName: Full=30S ribosomal protein S13
 gi|158706251|sp|A1UBY2|RS13_MYCSK RecName: Full=30S ribosomal protein S13
 gi|108768501|gb|ABG07223.1| SSU ribosomal protein S13P [Mycobacterium sp. MCS]
 gi|119693267|gb|ABL90340.1| SSU ribosomal protein S13P [Mycobacterium sp. KMS]
 gi|126233542|gb|ABN96942.1| SSU ribosomal protein S13P [Mycobacterium sp. JLS]
          Length = 124

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   SQ+I     I  + R   L + +V Q+R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGIDRDLRTKDLTDDQVTQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|54022801|ref|YP_117043.1| 30S ribosomal protein S13 [Nocardia farcinica IFM 10152]
 gi|81375955|sp|Q5Z1L2|RS13_NOCFA RecName: Full=30S ribosomal protein S13
 gi|54014309|dbj|BAD55679.1| putative ribosomal protein S13 [Nocardia farcinica IFM 10152]
          Length = 123

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 86/123 (69%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S++I     + P+ R   L + ++ ++R  I
Sbjct: 1   MARLMGVDLPREKRMEIALTYIYGIGRTRSKEILEATGVSPDLRSKDLSDDDLTKLRDYI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  +++VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   K    
Sbjct: 61  EASEFKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|262197165|ref|YP_003268374.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
 gi|262080512|gb|ACY16481.1| 30S ribosomal protein S13 [Haliangium ochraceum DSM 14365]
          Length = 127

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 75/121 (61%), Positives = 92/121 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG + S ++ +K  I P++R   L E++V  IR  I
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGRRRSNELLDKAGITPDKRTDDLDENDVRMIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   +  V +
Sbjct: 61  EANYKVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTSTNARTRKGPRRMPVKK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|161485633|ref|YP_925063.2| 30S ribosomal protein S13 [Nocardioides sp. JS614]
 gi|158706369|sp|A1SNJ1|RS13_NOCSJ RecName: Full=30S ribosomal protein S13
          Length = 124

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +Q +     + P+ RVHQL + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEIALTYIYGIGRTRAQQVLEATGVNPDLRVHQLGDEELVKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++++EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANFKIEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|162139877|ref|YP_744397.2| 30S ribosomal protein S13 [Granulibacter bethesdensis CGDNIH1]
 gi|158706371|sp|Q0BUM8|RS13_GRABC RecName: Full=30S ribosomal protein S13
          Length = 125

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV  +L YI+GIG   +Q IC +L+IP ERRV+QL + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK        +
Sbjct: 61  DREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|29831494|ref|NP_826128.1| 30S ribosomal protein S13 [Streptomyces avermitilis MA-4680]
 gi|32363228|sp|P59756|RS13_STRAW RecName: Full=30S ribosomal protein S13
 gi|29608610|dbj|BAC72663.1| putative ribosomal protein S13 [Streptomyces avermitilis MA-4680]
          Length = 126

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ    +  + P  RV  L E E+++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQKTLAETGVNPNTRVRDLSEEELVRIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++ EGDLRR V  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNFKTEGDLRREVQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|283782777|ref|YP_003373531.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05]
 gi|297242946|ref|ZP_06926884.1| ribosomal protein S13 [Gardnerella vaginalis AMD]
 gi|308235471|ref|ZP_07666208.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14018]
 gi|311115144|ref|YP_003986365.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019]
 gi|283441639|gb|ADB14105.1| 30S ribosomal protein S13 [Gardnerella vaginalis 409-05]
 gi|296889157|gb|EFH27891.1| ribosomal protein S13 [Gardnerella vaginalis AMD]
 gi|310946638|gb|ADP39342.1| 30S ribosomal protein S13 [Gardnerella vaginalis ATCC 14019]
          Length = 125

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      + P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGVNPDTRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154148745|ref|YP_001405815.1| 30S ribosomal protein S13 [Campylobacter hominis ATCC BAA-381]
 gi|166231907|sp|A7HZX4|RS13_CAMHC RecName: Full=30S ribosomal protein S13
 gi|153804754|gb|ABS51761.1| ribosomal protein S13p/S18e [Campylobacter hominis ATCC BAA-381]
          Length = 127

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 68/119 (57%), Positives = 86/119 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L YI+GIG  +S+ I +   I  ++RV  L E EV  IR+ I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYIYGIGLFTSRKILDATGISYDKRVADLSEDEVAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ Y VEGDLR+ V+MNIK LMDLGCYRGLRH +GLPVRGQ+T TNARTRK   K   A
Sbjct: 61  QEHYMVEGDLRKEVSMNIKSLMDLGCYRGLRHIKGLPVRGQKTKTNARTRKGKRKTVGA 119


>gi|163851602|ref|YP_001639645.1| ribosomal protein S13 [Methylobacterium extorquens PA1]
 gi|218530411|ref|YP_002421227.1| 30S ribosomal protein S13 [Methylobacterium chloromethanicum CM4]
 gi|240138770|ref|YP_002963242.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1]
 gi|254561370|ref|YP_003068465.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4]
 gi|226712759|sp|A9W4R8|RS13_METEP RecName: Full=30S ribosomal protein S13
 gi|254811154|sp|B7L0S8|RS13_METC4 RecName: Full=30S ribosomal protein S13
 gi|163663207|gb|ABY30574.1| ribosomal protein S13 [Methylobacterium extorquens PA1]
 gi|218522714|gb|ACK83299.1| ribosomal protein S13 [Methylobacterium chloromethanicum CM4]
 gi|240008739|gb|ACS39965.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens AM1]
 gi|254268648|emb|CAX24607.1| 30S ribosomal subunit protein S13 [Methylobacterium extorquens DM4]
          Length = 122

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP AKRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+AI
Sbjct: 1   MARIAGVNIPTAKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYIVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302877824|ref|YP_003846388.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2]
 gi|302580613|gb|ADL54624.1| 30S ribosomal protein S13 [Gallionella capsiferriformans ES-2]
          Length = 121

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V AL  I+GIG   SQ IC    + P  ++  L ++EV ++R+ +
Sbjct: 1   MARIAGVNIPNHQHAVIALTAIYGIGRVRSQGICAAAGVTPSVKMKDLTDAEVEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHRRGLP RGQRT TNARTRK   K     
Sbjct: 61  AK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPCRGQRTRTNARTRKGPRKAISGS 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|91977630|ref|YP_570289.1| 30S ribosomal protein S13 [Rhodopseudomonas palustris BisB5]
 gi|123762626|sp|Q134V1|RS13_RHOPS RecName: Full=30S ribosomal protein S13
 gi|91684086|gb|ABE40388.1| SSU ribosomal protein S13P [Rhodopseudomonas palustris BisB5]
          Length = 122

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 85/122 (69%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKNAADIIEKVKIPVDRRVNQLSDAEVLQIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|91774658|ref|YP_544414.1| 30S ribosomal protein S13 [Methylobacillus flagellatus KT]
 gi|123380633|sp|Q1H4L4|RS13_METFK RecName: Full=30S ribosomal protein S13
 gi|91708645|gb|ABE48573.1| SSU ribosomal protein S13P [Methylobacillus flagellatus KT]
          Length = 120

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G  +++ IC    +    ++  L ++EV ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIALTSIYGVGRTTAKQICLAAGVSATAKIKDLNDAEVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  QVEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   K   A 
Sbjct: 61  AK-LQVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPIKPIKAS 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|17547715|ref|NP_521117.1| 30S ribosomal protein S13 [Ralstonia solanacearum GMI1000]
 gi|32363369|sp|Q8XV35|RS13_RALSO RecName: Full=30S ribosomal protein S13
 gi|17430020|emb|CAD16705.1| probable 30s ribosomal protein s13 [Ralstonia solanacearum GMI1000]
 gi|299065438|emb|CBJ36607.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CMR15]
          Length = 121

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   ++ IC    IP +++V  L + +   +R+ I
Sbjct: 1   MARIAGVNIPNHKHTVIGLTAIYGIGRSRARKICEATGIPTDKKVKDLTDPDQDALRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  EK-FLVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|294630918|ref|ZP_06709478.1| 30S ribosomal protein S13 [Streptomyces sp. e14]
 gi|292834251|gb|EFF92600.1| 30S ribosomal protein S13 [Streptomyces sp. e14]
          Length = 126

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLAATGVDPNTRVRDLTEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296268578|ref|YP_003651210.1| 30S ribosomal protein S13 [Thermobispora bispora DSM 43833]
 gi|296091365|gb|ADG87317.1| ribosomal protein S13 [Thermobispora bispora DSM 43833]
          Length = 126

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   +++I     I P+ RV+QL ++E++ IR  I
Sbjct: 1   MARLVGVDLPRDKRLEIALTYIYGIGRSRAKEILKATGINPDLRVYQLTDAELVPIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V  +I+R +++GCY+G+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRKGLPVRGQRTQTNARTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257866552|ref|ZP_05646205.1| ribosomal protein S13 [Enterococcus casseliflavus EC30]
 gi|257872932|ref|ZP_05652585.1| ribosomal protein S13 [Enterococcus casseliflavus EC10]
 gi|257876156|ref|ZP_05655809.1| ribosomal protein S13 [Enterococcus casseliflavus EC20]
 gi|325567353|ref|ZP_08144020.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755]
 gi|257800510|gb|EEV29538.1| ribosomal protein S13 [Enterococcus casseliflavus EC30]
 gi|257807096|gb|EEV35918.1| ribosomal protein S13 [Enterococcus casseliflavus EC10]
 gi|257810322|gb|EEV39142.1| ribosomal protein S13 [Enterococcus casseliflavus EC20]
 gi|325158786|gb|EGC70932.1| 30S ribosomal protein S13 [Enterococcus casseliflavus ATCC 12755]
          Length = 121

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILADAGVSEEVRVRDLTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|257064665|ref|YP_003144337.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476]
 gi|256792318|gb|ACV22988.1| SSU ribosomal protein S13P [Slackia heliotrinireducens DSM 20476]
          Length = 123

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 62/121 (51%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+   L YI+GIG  +++ I  +  + P+ RV  + E ++ +IR  I
Sbjct: 1   MPRLFGVDLPRDKRIETGLTYIYGIGNTTAKKIIAETGVDPDVRVRDISEEDLQKIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +  VEGDL R V+ N+KRLM++GCYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DANLTVEGDLHREVSQNVKRLMEIGCYRGLRHRKGLPVRGQRTHTNARTRKGPRKQIGGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|169350819|ref|ZP_02867757.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552]
 gi|169292405|gb|EDS74538.1| hypothetical protein CLOSPI_01593 [Clostridium spiroforme DSM 1552]
          Length = 121

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q+I  K+ I    RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILAKVGINENTRVKDLTEDEIGKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKAKPIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|253682110|ref|ZP_04862907.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873]
 gi|331268439|ref|YP_004394931.1| 30S ribosomal protein S13 [Clostridium botulinum BKT015925]
 gi|253561822|gb|EES91274.1| 30S ribosomal protein S13 [Clostridium botulinum D str. 1873]
 gi|329124989|gb|AEB74934.1| ribosomal protein S13 [Clostridium botulinum BKT015925]
          Length = 123

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S+ I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSRQILKETGVNPDTRVKDLSEEEVNTIRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|195952668|ref|YP_002120958.1| 30S ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1]
 gi|226712748|sp|B4U769|RS13_HYDS0 RecName: Full=30S ribosomal protein S13
 gi|195932280|gb|ACG56980.1| ribosomal protein S13 [Hydrogenobaculum sp. Y04AAS1]
          Length = 126

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 93/122 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL YI+GIG+  ++++C +  IP  +++ +L   E+ Q+R+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYIYGIGWSKAREVCEQTGIPSIKKLGELTPEELNQLRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+ +VEGDLRR V +NIKRL+D+G YRGLRH RGLPVRGQ+T TNARTRK   KG VA 
Sbjct: 61  EQNIKVEGDLRREVQLNIKRLVDIGTYRGLRHVRGLPVRGQQTKTNARTRKGRRKGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|118443662|ref|YP_877224.1| 30S ribosomal protein S13 [Clostridium novyi NT]
 gi|158706223|sp|A0PXX2|RS13_CLONN RecName: Full=30S ribosomal protein S13
 gi|118134118|gb|ABK61162.1| ribosomal protein S13p/S18e [Clostridium novyi NT]
          Length = 123

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S++I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +++ +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  GKNFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|294786436|ref|ZP_06751690.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
 gi|294485269|gb|EFG32903.1| 30S ribosomal protein S13 [Parascardovia denticolens F0305]
          Length = 134

 Score =  176 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 12  MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK   +    +
Sbjct: 72  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|148256370|ref|YP_001240955.1| 30S ribosomal protein S13 [Bradyrhizobium sp. BTAi1]
 gi|158706214|sp|A5ELK5|RS13_BRASB RecName: Full=30S ribosomal protein S13
 gi|146408543|gb|ABQ37049.1| SSU ribosomal protein S13P [Bradyrhizobium sp. BTAi1]
          Length = 122

 Score =  176 bits (447), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ I  +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGPKIASEIIEKVKIAEDRRVNQLSDQEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329770016|ref|ZP_08261411.1| 30S ribosomal protein S13 [Gemella sanguinis M325]
 gi|328837327|gb|EGF86957.1| 30S ribosomal protein S13 [Gemella sanguinis M325]
          Length = 121

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L   ++ +IR+A+
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK   K    +
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|257870541|ref|ZP_05650194.1| ribosomal protein S13 [Enterococcus gallinarum EG2]
 gi|257804705|gb|EEV33527.1| ribosomal protein S13 [Enterococcus gallinarum EG2]
          Length = 121

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|86609043|ref|YP_477805.1| 30S ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123502213|sp|Q2JL76|RS13_SYNJB RecName: Full=30S ribosomal protein S13
 gi|86557585|gb|ABD02542.1| ribosomal protein S13 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 127

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/117 (61%), Positives = 83/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   S+ I  K  I P+ R   L ++EV  +R  +
Sbjct: 1   MARIAGVDIPREKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRTVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTRK   K  
Sbjct: 61  EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLGLPVRGQRTRTNARTRKGVRKTV 117


>gi|296445045|ref|ZP_06887006.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b]
 gi|296257466|gb|EFH04532.1| 30S ribosomal protein S13 [Methylosinus trichosporium OB3b]
          Length = 122

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +Q+I  K+ IPPERRV QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAKKAQEIIEKVNIPPERRVAQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VA+NIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVAINIKRLMDLGCYRGLRHRRQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|52783997|ref|YP_089826.1| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|163119191|ref|YP_077426.2| 30S ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|319649090|ref|ZP_08003298.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2]
 gi|81386392|sp|Q65P81|RS13_BACLD RecName: Full=30S ribosomal protein S13
 gi|52346499|gb|AAU39133.1| RpsM [Bacillus licheniformis ATCC 14580]
 gi|145902697|gb|AAU21788.2| ribosomal protein S13 [Bacillus licheniformis ATCC 14580]
 gi|317388790|gb|EFV69609.1| 30S ribosomal protein S13 [Bacillus sp. BT1B_CT2]
          Length = 121

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q I  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQILKEAGVSEDTRVRDLTEEELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|162149152|ref|YP_001603613.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209545104|ref|YP_002277333.1| 30S ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
 gi|189044278|sp|A9H3J7|RS13_GLUDA RecName: Full=30S ribosomal protein S13
 gi|161787729|emb|CAP57325.1| putative 30S ribosomal protein S13 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532781|gb|ACI52718.1| ribosomal protein S13 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 125

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/122 (65%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV   L YI+GIG   +++IC +L IP ERRV++L + E+++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVTIGLRYIYGIGETKAEEICRRLEIPAERRVNELSDDEILKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK        +
Sbjct: 61  DSEYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|16125519|ref|NP_420083.1| 30S ribosomal protein S13 [Caulobacter crescentus CB15]
 gi|221234265|ref|YP_002516701.1| 30S ribosomal protein S13 [Caulobacter crescentus NA1000]
 gi|32363389|sp|Q9A8T1|RS13_CAUCR RecName: Full=30S ribosomal protein S13
 gi|254811137|sp|B8H4F6|RS13_CAUCN RecName: Full=30S ribosomal protein S13
 gi|13422603|gb|AAK23251.1| ribosomal protein S13 [Caulobacter crescentus CB15]
 gi|220963437|gb|ACL94793.1| SSU ribosomal protein S13P [Caulobacter crescentus NA1000]
          Length = 122

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 98/122 (80%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS+++I  K+ I   RRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|261417632|ref|YP_003251314.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61]
 gi|319765290|ref|YP_004130791.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52]
 gi|261374089|gb|ACX76832.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC61]
 gi|317110156|gb|ADU92648.1| 30S ribosomal protein S13 [Geobacillus sp. Y412MC52]
          Length = 121

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
               +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  G-CLKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|283853176|ref|ZP_06370429.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B]
 gi|283571434|gb|EFC19441.1| ribosomal protein S13 [Desulfovibrio sp. FW1012B]
          Length = 123

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  ++  I     +   +    L   E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIYGIGRTTALRILEVTGVDWTKNSDALSPEETNTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR V  NIKRLMD+GC+RGLRHRRGLP RGQRTHTNARTRK   +G +A+
Sbjct: 61  EANHKVEGDLRRDVTANIKRLMDIGCFRGLRHRRGLPCRGQRTHTNARTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|295688928|ref|YP_003592621.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756]
 gi|295430831|gb|ADG10003.1| 30S ribosomal protein S13 [Caulobacter segnis ATCC 21756]
          Length = 122

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 81/122 (66%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG KS+++I  K+ I   RRV+QL ++EV+ IR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGQKSAREIITKVGIEDARRVNQLTDAEVLAIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR  +MNIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYTVEGDLRRENSMNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154249792|ref|YP_001410617.1| 30S ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1]
 gi|171769363|sp|A7HM27|RS13_FERNB RecName: Full=30S ribosomal protein S13
 gi|154153728|gb|ABS60960.1| ribosomal protein S13 [Fervidobacterium nodosum Rt17-B1]
          Length = 123

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K+V  AL Y++GIG   + +IC    + P++RV +L E E+ +I   I
Sbjct: 1   MARIVGVEIPSNKKVHIALRYLYGIGPTRAMEICKNTGVDPDKRVKELTEDEISKIASFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+Y+VEG+LR  V  NIKRLMD+GCYRGLRH+ GLPVRGQRT +NARTRK      + +
Sbjct: 61  QQNYKVEGELRTEVMRNIKRLMDIGCYRGLRHKLGLPVRGQRTRSNARTRKGPRPSRIKK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|289641141|ref|ZP_06473309.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata]
 gi|289509082|gb|EFD30013.1| ribosomal protein S13 [Frankia symbiont of Datisca glomerata]
          Length = 126

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S +      + P+ RV  L + E++++R+ I
Sbjct: 1   MARLSGVDLPRDKRVEIALTYIFGIGRSRSLETLAATGVNPDTRVQDLTDEEIVRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + +Y+VEGDL R V  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DANYRVEGDLHREVRQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|298345437|ref|YP_003718124.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304390993|ref|ZP_07372945.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315655843|ref|ZP_07908741.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315656231|ref|ZP_07909122.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298235498|gb|ADI66630.1| 30S ribosomal protein S13 [Mobiluncus curtisii ATCC 43063]
 gi|304325876|gb|EFL93122.1| 30S ribosomal protein S13 [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315489907|gb|EFU79534.1| ribosomal protein S13p/S18e [Mobiluncus curtisii ATCC 51333]
 gi|315493233|gb|EFU82833.1| ribosomal protein S13p/S18e [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 124

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      + P+ RV  L E E+I +R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIYGIGRTRATETLAATGVSPDTRVKDLTEDELIALRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR VA +I+R +++ CY+G RHR GLPV GQRT TNAR+RK   +    +
Sbjct: 61  QANYKVEGDLRREVAADIRRKIEINCYQGRRHRAGLPVHGQRTKTNARSRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|259047531|ref|ZP_05737932.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175]
 gi|259035722|gb|EEW36977.1| 30S ribosomal protein S13 [Granulicatella adiacens ATCC 49175]
          Length = 121

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +S+ I     +  + RV +L   E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGITTSKQILAAANVNEDTRVRELTNDELDRIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|213693064|ref|YP_002323650.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|254811130|sp|B7GNB6|RS13_BIFLI RecName: Full=30S ribosomal protein S13
 gi|213524525|gb|ACJ53272.1| ribosomal protein S13 [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|320459242|dbj|BAJ69863.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 125

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|330470147|ref|YP_004407890.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
 gi|328813118|gb|AEB47290.1| 30S ribosomal protein S13 [Verrucosispora maris AB-18-032]
          Length = 126

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYEGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|23012204|ref|ZP_00052348.1| COG0099: Ribosomal protein S13 [Magnetospirillum magnetotacticum
           MS-1]
          Length = 136

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/121 (69%), Positives = 99/121 (81%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I+
Sbjct: 16  ARIAGVNIPTGKRVVIALQYIHGIGPKKAEEITEKVGIPAERRVNQLTDAEVLQIRETID 75

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR V+MNIKRLMDLGCYRGLRHR+ LPVRGQRTHTNARTRK   K    +K
Sbjct: 76  RDYVVEGDLRREVSMNIKRLMDLGCYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGKK 135

Query: 122 R 122
           +
Sbjct: 136 K 136


>gi|315225999|ref|ZP_07867787.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
 gi|315120131|gb|EFT83263.1| ribosomal protein S13p/S18e [Parascardovia denticolens DSM 10105]
          Length = 123

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 1   MARLAGVDIPNDKRIEVALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLIQLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|224542263|ref|ZP_03682802.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524805|gb|EEF93910.1| hypothetical protein CATMIT_01438 [Catenibacterium mitsuokai DSM
           15897]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  +++ I     +  + RV  L E E  +IR+ +
Sbjct: 1   MARIAGIDIPRDKRVVVSLTYIYGIGPTTAKKILAAAGVSEDVRVKDLTEEEETKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   + EGDLRR   +NIKRLM++GCYRGLRHRRGLPVRGQRT TNARTRK        +
Sbjct: 61  EH-IKTEGDLRRETQLNIKRLMEIGCYRGLRHRRGLPVRGQRTKTNARTRKGKATPIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|89100323|ref|ZP_01173188.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911]
 gi|89084944|gb|EAR64080.1| 30S ribosomal protein S13 [Bacillus sp. NRRL B-14911]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q +  +  +  + RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGKNTAQKVLAEAGVSEDTRVRDLTEDELNKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-LKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|301057490|ref|ZP_07198586.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2]
 gi|300448418|gb|EFK12087.1| 30S ribosomal protein S13 [delta proteobacterium NaphS2]
          Length = 122

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  SSQ +  +  I  + +  +L   ++  IR+ I
Sbjct: 1   MARIAGVDLPKGKRIEIALTYIYGIGRTSSQKMLTEAGINWDTKSDELTSEQIASIRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR V+MNIKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   +  V +
Sbjct: 61  DEKYTVEGDLRREVSMNIKRLMDLGLYRGLRHRRGLPVRGQRTSTNARTRKGPRRAVVGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|262038712|ref|ZP_06012072.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
 gi|261747264|gb|EEY34743.1| 30S ribosomal protein S13 [Leptotrichia goodfellowii F0264]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  +S +I  K  +  + +V  L E +V +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEISLTYIFGIGRSTSNEILEKAGVDKDIKVKDLTEEQVGKIRTIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL+D+  YRGLRHR GLPVRGQ+T TNARTRK   K  +A+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVKMAIAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|260584440|ref|ZP_05852187.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633]
 gi|260157958|gb|EEW93027.1| 30S ribosomal protein S13 [Granulicatella elegans ATCC 700633]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +S+ +     +  + RV  L   E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGVTTSKQVLAAANVSEDTRVRDLSNDELDRIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  ++EGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKIEGDLRREVNLNIKRLMEIGSYRGVRHRRGLPVRGQNTKNNARTRKGPAKAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300309479|ref|YP_003773571.1| 30S ribosomal protein S13 [Herbaspirillum seropedicae SmR1]
 gi|300072264|gb|ADJ61663.1| 30S ribosomal subunit S13 protein [Herbaspirillum seropedicae SmR1]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I+GIG   +QDIC    +P  ++V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIYGIGRPRAQDICAATGVPTNKKVKDLDDNELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   + 
Sbjct: 61  AK-FVVEGDLRRELSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|238061097|ref|ZP_04605806.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
 gi|237882908|gb|EEP71736.1| 30S ribosomal protein S13 [Micromonospora sp. ATCC 39149]
          Length = 126

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|71905984|ref|YP_283571.1| 30S ribosomal protein S13 [Dechloromonas aromatica RCB]
 gi|91207698|sp|Q47J80|RS13_DECAR RecName: Full=30S ribosomal protein S13
 gi|71845605|gb|AAZ45101.1| SSU ribosomal protein S13P [Dechloromonas aromatica RCB]
          Length = 120

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I GIG   +Q IC+   +    ++  L +S++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIFGIGRTRAQKICDAAGVGRNVKMKDLSDSDMDRLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   K    +
Sbjct: 61  GK-FTVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|319948698|ref|ZP_08022819.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
 gi|319437600|gb|EFV92599.1| 30S ribosomal protein S13 [Dietzia cinnamea P4]
          Length = 122

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S +I  +  I P+ R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILERTGISPDLRTKDLTDEQLTVLRDDI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGNYKVEGDLRREIQGDIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|187918366|ref|YP_001883929.1| 30S ribosomal protein S13 [Borrelia hermsii DAH]
 gi|226712700|sp|B2S0K3|RS13_BORHD RecName: Full=30S ribosomal protein S13
 gi|119861214|gb|AAX17009.1| SSU ribosomal protein S13P [Borrelia hermsii DAH]
          Length = 125

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  + P++R  +L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRARALEICEKTGVLPDKRAKELDNDEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|329768297|ref|ZP_08259798.1| 30S ribosomal protein S13 [Gemella haemolysans M341]
 gi|328837496|gb|EGF87125.1| 30S ribosomal protein S13 [Gemella haemolysans M341]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K+SQ I  +  +  + RV  L   ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTSQKILKEAGVSEDVRVKDLTGEQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK   K    +
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|317496166|ref|ZP_07954526.1| 30S ribosomal protein S13 [Gemella moribillum M424]
 gi|316913741|gb|EFV35227.1| 30S ribosomal protein S13 [Gemella moribillum M424]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG K++Q I  +  +  + RV  L   ++ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGLKTAQKILKEAGVSEDIRVKDLSGEQLDKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+ EGDLRR V++NIKRLM++GCYRG+RHRRGLPVRGQ T  N+RTRK   K    +
Sbjct: 61  D-NYKTEGDLRREVSLNIKRLMEIGCYRGIRHRRGLPVRGQNTKNNSRTRKGPKKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|291613259|ref|YP_003523416.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1]
 gi|291583371|gb|ADE11029.1| 30S ribosomal protein S13 [Sideroxydans lithotrophicus ES-1]
          Length = 121

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I+GIG   +Q IC    I    +V  + +S++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIYGIGRTRAQQICAAAGIVTSTKVKDISDSDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRRGLP RGQRT TNARTRK   K     
Sbjct: 61  AK-FTVEGDLRREISMNIKRLMDLGCYRGLRHRRGLPCRGQRTRTNARTRKGPRKSIAGA 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703]
          Length = 136

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 12  MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 71

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 72  EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 131

Query: 121 KR 122
           K+
Sbjct: 132 KK 133


>gi|167748454|ref|ZP_02420581.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662]
 gi|317472013|ref|ZP_07931345.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA]
 gi|167652446|gb|EDR96575.1| hypothetical protein ANACAC_03198 [Anaerostipes caccae DSM 14662]
 gi|316900417|gb|EFV22399.1| 30S ribosomal protein S13 [Anaerostipes sp. 3_2_56FAA]
          Length = 122

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SS+ I ++  + P+ RV  L + EV +I + I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLTSSKRILSEANVNPDTRVRDLTDDEVRRISEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR +A+NIKRL ++G YRG RHR+GLP RGQ+T TNART K   K    +
Sbjct: 61  SESQTVEGDLRREIALNIKRLKEIGSYRGKRHRQGLPCRGQKTKTNARTCKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319938483|ref|ZP_08012877.1| 30S ribosomal protein [Coprobacillus sp. 29_1]
 gi|319806399|gb|EFW03066.1| 30S ribosomal protein [Coprobacillus sp. 29_1]
          Length = 121

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ IC    I  + RV  L E E  +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGATTAKKICEATGISEDTRVKDLTEEEEGKIRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ ++VEGDLRR  A+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  EK-FKVEGDLRRDTALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKARPIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|90962382|ref|YP_536298.1| 30S ribosomal protein S13 [Lactobacillus salivarius UCC118]
 gi|227891568|ref|ZP_04009373.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741]
 gi|301300217|ref|ZP_07206429.1| 30S ribosomal protein S13 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|122448614|sp|Q1WSB4|RS13_LACS1 RecName: Full=30S ribosomal protein S13
 gi|90821576|gb|ABE00215.1| SSU ribosomal protein S13P [Lactobacillus salivarius UCC118]
 gi|227866715|gb|EEJ74136.1| 30S ribosomal protein S13 [Lactobacillus salivarius ATCC 11741]
 gi|300852158|gb|EFK79830.1| 30S ribosomal protein S13 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 121

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV  L YI+GIG  ++Q I ++  +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRNKRVVIGLTYIYGIGNSTAQKILSEAGVSEDVRVRDLTADQEDKIRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V++NIKRL ++G YRGLRHRR LPVRGQ T  NARTRK        +
Sbjct: 61  DK-YKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPVRGQNTKNNARTRKGPAVSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|94312225|ref|YP_585435.1| 30S ribosomal protein S13 [Cupriavidus metallidurans CH34]
 gi|194291000|ref|YP_002006907.1| 30S ribosomal protein s13 [Cupriavidus taiwanensis LMG 19424]
 gi|158706270|sp|Q1LI60|RS13_RALME RecName: Full=30S ribosomal protein S13
 gi|226712725|sp|B3R7E6|RS13_CUPTR RecName: Full=30S ribosomal protein S13
 gi|93356077|gb|ABF10166.1| 30S ribosomal subunit protein S13 [Cupriavidus metallidurans CH34]
 gi|193224835|emb|CAQ70846.1| 30S ribosomal subunit protein S13 [Cupriavidus taiwanensis LMG
           19424]
          Length = 121

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+GIG   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGIGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163840860|ref|YP_001625265.1| 30S ribosomal protein S13 [Renibacterium salmoninarum ATCC 33209]
 gi|189044289|sp|A9WSR3|RS13_RENSM RecName: Full=30S ribosomal protein S13
 gi|162954336|gb|ABY23851.1| SSU ribosomal protein S13P [Renibacterium salmoninarum ATCC 33209]
          Length = 125

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G   +     +  I P+ RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDLPREKRLEVALTYIYGVGKTRAHKTLAETGISPDVRVKDLSDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y G+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EVNYKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149195171|ref|ZP_01872262.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2]
 gi|149134723|gb|EDM23208.1| 30S ribosomal protein S13 [Caminibacter mediatlanticus TB-2]
          Length = 122

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K++  AL YI+GIG  +S+ I     I P +RV++L E EV  + + I
Sbjct: 1   MARIAGIDLPKNKKIEYALPYIYGIGLTTSRKILKDTGIDPNKRVYELTEDEVSILNKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   A+
Sbjct: 61  QNNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGKRKTVGAK 120

Query: 121 KR 122
            +
Sbjct: 121 AK 122


>gi|69247193|ref|ZP_00604255.1| Ribosomal protein S13 [Enterococcus faecium DO]
 gi|227550743|ref|ZP_03980792.1| ribosomal protein S13 [Enterococcus faecium TX1330]
 gi|257878748|ref|ZP_05658401.1| ribosomal protein S13 [Enterococcus faecium 1,230,933]
 gi|257881390|ref|ZP_05661043.1| ribosomal protein S13 [Enterococcus faecium 1,231,502]
 gi|257885657|ref|ZP_05665310.1| ribosomal protein S13 [Enterococcus faecium 1,231,501]
 gi|257887998|ref|ZP_05667651.1| ribosomal protein S13 [Enterococcus faecium 1,141,733]
 gi|257890607|ref|ZP_05670260.1| ribosomal protein S13 [Enterococcus faecium 1,231,410]
 gi|257893198|ref|ZP_05672851.1| ribosomal protein S13 [Enterococcus faecium 1,231,408]
 gi|257896383|ref|ZP_05676036.1| ribosomal protein S13 [Enterococcus faecium Com12]
 gi|257899358|ref|ZP_05679011.1| ribosomal protein S13 [Enterococcus faecium Com15]
 gi|258615187|ref|ZP_05712957.1| 30S ribosomal protein S13 [Enterococcus faecium DO]
 gi|260558311|ref|ZP_05830507.1| ribosomal protein S13 [Enterococcus faecium C68]
 gi|261207016|ref|ZP_05921705.1| ribosomal protein S13 [Enterococcus faecium TC 6]
 gi|289565349|ref|ZP_06445799.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF]
 gi|293379469|ref|ZP_06625613.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1]
 gi|293553902|ref|ZP_06674508.1| 30S ribosomal protein S13 [Enterococcus faecium E1039]
 gi|293562970|ref|ZP_06677437.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162]
 gi|293567908|ref|ZP_06679249.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071]
 gi|293570707|ref|ZP_06681757.1| ribosomal protein S13p/S18e [Enterococcus faecium E980]
 gi|294615370|ref|ZP_06695243.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636]
 gi|294618296|ref|ZP_06697877.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679]
 gi|294621102|ref|ZP_06700293.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317]
 gi|314937632|ref|ZP_07844958.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04]
 gi|314942869|ref|ZP_07849682.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C]
 gi|314947995|ref|ZP_07851399.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082]
 gi|314950912|ref|ZP_07853981.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A]
 gi|314991440|ref|ZP_07856917.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B]
 gi|314995039|ref|ZP_07860159.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01]
 gi|68194958|gb|EAN09426.1| Ribosomal protein S13 [Enterococcus faecium DO]
 gi|227180204|gb|EEI61176.1| ribosomal protein S13 [Enterococcus faecium TX1330]
 gi|257812976|gb|EEV41734.1| ribosomal protein S13 [Enterococcus faecium 1,230,933]
 gi|257817048|gb|EEV44376.1| ribosomal protein S13 [Enterococcus faecium 1,231,502]
 gi|257821513|gb|EEV48643.1| ribosomal protein S13 [Enterococcus faecium 1,231,501]
 gi|257824052|gb|EEV50984.1| ribosomal protein S13 [Enterococcus faecium 1,141,733]
 gi|257826967|gb|EEV53593.1| ribosomal protein S13 [Enterococcus faecium 1,231,410]
 gi|257829577|gb|EEV56184.1| ribosomal protein S13 [Enterococcus faecium 1,231,408]
 gi|257832948|gb|EEV59369.1| ribosomal protein S13 [Enterococcus faecium Com12]
 gi|257837270|gb|EEV62344.1| ribosomal protein S13 [Enterococcus faecium Com15]
 gi|260075485|gb|EEW63791.1| ribosomal protein S13 [Enterococcus faecium C68]
 gi|260078644|gb|EEW66346.1| ribosomal protein S13 [Enterococcus faecium TC 6]
 gi|289162839|gb|EFD10689.1| 30S ribosomal protein S13 [Enterococcus faecium D344SRF]
 gi|291589493|gb|EFF21300.1| ribosomal protein S13p/S18e [Enterococcus faecium E1071]
 gi|291591744|gb|EFF23380.1| ribosomal protein S13p/S18e [Enterococcus faecium E1636]
 gi|291595390|gb|EFF26702.1| ribosomal protein S13p/S18e [Enterococcus faecium E1679]
 gi|291599338|gb|EFF30364.1| ribosomal protein S13p/S18e [Enterococcus faecium U0317]
 gi|291601954|gb|EFF32200.1| 30S ribosomal protein S13 [Enterococcus faecium E1039]
 gi|291605096|gb|EFF34563.1| ribosomal protein S13p/S18e [Enterococcus faecium E1162]
 gi|291609179|gb|EFF38451.1| ribosomal protein S13p/S18e [Enterococcus faecium E980]
 gi|292641992|gb|EFF60158.1| 30S ribosomal protein S13 [Enterococcus faecium PC4.1]
 gi|313590765|gb|EFR69610.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a01]
 gi|313593920|gb|EFR72765.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133B]
 gi|313596921|gb|EFR75766.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133A]
 gi|313598341|gb|EFR77186.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133C]
 gi|313643009|gb|EFS07589.1| 30S ribosomal protein S13 [Enterococcus faecium TX0133a04]
 gi|313645593|gb|EFS10173.1| 30S ribosomal protein S13 [Enterococcus faecium TX0082]
          Length = 121

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  + RV +L   +   IR  +
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKILADAGVSEDVRVRELTNEQTDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPARAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|289423653|ref|ZP_06425452.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
 gi|289155903|gb|EFD04569.1| 30S ribosomal protein S13 [Peptostreptococcus anaerobius 653-L]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG  +S +I  K  I  + R+  L + EV  +R+ I
Sbjct: 1   MARIAGVDLPREKRAEIGLTYIYGIGRATSNEILAKAGISKDARIKDLSDDEVNVLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR +++NIKRL D+ CYRG+RH +GLP+RGQ+T TNARTRK   K    +
Sbjct: 61  DEDYLVEGDLRREISLNIKRLRDIKCYRGMRHAKGLPLRGQKTKTNARTRKGPRKTVSRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|168187788|ref|ZP_02622423.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund]
 gi|169294364|gb|EDS76497.1| ribosomal protein S13p/S18e [Clostridium botulinum C str. Eklund]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 88/121 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG   S++I  +  + P+ RV  L E EV  IR  I
Sbjct: 1   MARIAGIDLPKEKRVEVGLTYIYGIGINRSREILKETGVNPDTRVKDLSEEEVNTIRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EGDLRRT+A++IKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK   +    +
Sbjct: 61  GKSFVIEGDLRRTIALDIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGPKRAISGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|118473987|ref|YP_885903.1| 30S ribosomal protein S13 [Mycobacterium smegmatis str. MC2 155]
 gi|158706249|sp|A0QSL5|RS13_MYCS2 RecName: Full=30S ribosomal protein S13
 gi|118175274|gb|ABK76170.1| ribosomal protein S13p/S18e [Mycobacterium smegmatis str. MC2 155]
          Length = 124

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S +I     I    R   L + +V  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSNEILAATGIDKNMRTKDLTDDQVTVLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|73542841|ref|YP_297361.1| 30S ribosomal protein S13 [Ralstonia eutropha JMP134]
 gi|91207721|sp|Q46WG6|RS13_RALEJ RecName: Full=30S ribosomal protein S13
 gi|72120254|gb|AAZ62517.1| SSU ribosomal protein S13P [Ralstonia eutropha JMP134]
          Length = 121

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+G+G   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPLRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|294790436|ref|ZP_06755594.1| 30S ribosomal protein S13 [Scardovia inopinata F0304]
 gi|294458333|gb|EFG26686.1| 30S ribosomal protein S13 [Scardovia inopinata F0304]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++IQ+R  +
Sbjct: 1   MARLAGVDIPNEKRIEVALTYIFGVGRTRAKETLEATGISPDIRVKDLTDEQLIQLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G+RHRR LPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKIEGDLRREIDADIRRKVQINCYQGIRHRRHLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|145225549|ref|YP_001136227.1| 30S ribosomal protein S13 [Mycobacterium gilvum PYR-GCK]
 gi|315445901|ref|YP_004078780.1| 30S ribosomal protein S13P [Mycobacterium sp. Spyr1]
 gi|189044282|sp|A4TEI2|RS13_MYCGI RecName: Full=30S ribosomal protein S13
 gi|145218035|gb|ABP47439.1| SSU ribosomal protein S13P [Mycobacterium gilvum PYR-GCK]
 gi|315264204|gb|ADU00946.1| SSU ribosomal protein S13P [Mycobacterium sp. Spyr1]
          Length = 124

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   SQ+I     I  ++R   L + +V Q+R  I
Sbjct: 1   MARLMGVDLPRDKRMEIALTYIYGVGRTRSQEILEATGISRDQRTKDLTDDQVSQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|320160438|ref|YP_004173662.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1]
 gi|319994291|dbj|BAJ63062.1| 30S ribosomal protein S13 [Anaerolinea thermophila UNI-1]
          Length = 128

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/120 (56%), Positives = 84/120 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI+GIG   +++      + P+ RV  L E+EV  +R  I
Sbjct: 1   MARIEGVDLPRNKRVEVALTYIYGIGPTRARETLAATKVNPDTRVKDLTEAEVNALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLRR V M+IKRL+++GCYRGLRHRR LPVRGQRT TNARTRK   K    R
Sbjct: 61  ARNYTVEGDLRREVQMSIKRLIEIGCYRGLRHRRNLPVRGQRTRTNARTRKGPRKTVAGR 120


>gi|239918175|ref|YP_002957733.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
 gi|259494685|sp|C5CC38|RS13_MICLC RecName: Full=30S ribosomal protein S13
 gi|239839382|gb|ACS31179.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
          Length = 122

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++      I P  RV  L   +++Q+R  I
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGSYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225076417|ref|ZP_03719616.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens
           NRL30031/H210]
 gi|224952265|gb|EEG33474.1| hypothetical protein NEIFLAOT_01462 [Neisseria flavescens
           NRL30031/H210]
          Length = 120

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E ++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEDQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|85709031|ref|ZP_01040097.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1]
 gi|85690565|gb|EAQ30568.1| 30S ribosomal protein S13 [Erythrobacter sp. NAP1]
          Length = 122

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/122 (63%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG  ++  I +KL IP   RV  L + EV++IR+ I
Sbjct: 1   MARIAGVNIPTNKRVIIALTYIHGIGRTTAVQIADKLGIPHTARVQDLTDEEVLRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR  AMNIKRLMDL  YRGLRHR  LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DEAYTVEGDLRRNTAMNIKRLMDLRSYRGLRHRNQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|49074668|gb|AAT49419.1| PA4241 [synthetic construct]
          Length = 119

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|302869945|ref|YP_003838582.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
 gi|302572804|gb|ADL49006.1| 30S ribosomal protein S13 [Micromonospora aurantiaca ATCC 27029]
          Length = 126

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++RV  L + E++++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|158319569|ref|YP_001512076.1| 30S ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
 gi|166991597|sp|A8MLG6|RS13_ALKOO RecName: Full=30S ribosomal protein S13
 gi|158139768|gb|ABW18080.1| ribosomal protein S13 [Alkaliphilus oremlandii OhILAs]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/113 (57%), Positives = 82/113 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG K+S +I     I P+ R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPRDKRVEVGLTYIFGIGRKTSNNILAAAGINPDTRIKDLTEEEVNNLRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           + D+ VEGDLRR +A+NIKRL ++ CYRG+RH +GLPVRGQ+T TNARTRK  
Sbjct: 61  DADHHVEGDLRREIALNIKRLKEIRCYRGIRHIKGLPVRGQKTKTNARTRKGP 113


>gi|256831851|ref|YP_003160578.1| 30S ribosomal protein S13 [Jonesia denitrificans DSM 20603]
 gi|256685382|gb|ACV08275.1| ribosomal protein S13 [Jonesia denitrificans DSM 20603]
          Length = 124

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+G+G   +Q       I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEVALTYIYGVGRTRAQQTLEATGISPDVRVKDLGDTELVALRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|288818041|ref|YP_003432388.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
 gi|288787440|dbj|BAI69187.1| ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
 gi|308751642|gb|ADO45125.1| 30S ribosomal protein S13 [Hydrogenobacter thermophilus TK-6]
          Length = 126

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K++  AL Y++GIG+  S++IC K  IP  +R+ +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDHKKLEVALTYLYGIGWSRSREICQKTGIPCTKRLGELTPDELNTIRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+Y+VEGDLRR V MNIKRLMD+G YRG+RH RGLPVRGQ+T TN+RTRK   K     
Sbjct: 61  EQNYKVEGDLRREVQMNIKRLMDMGSYRGIRHSRGLPVRGQQTRTNSRTRKGKRKTVGGT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15599437|ref|NP_252931.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1]
 gi|107103757|ref|ZP_01367675.1| hypothetical protein PaerPA_01004828 [Pseudomonas aeruginosa PACS2]
 gi|116052276|ref|YP_788878.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889430|ref|YP_002438294.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58]
 gi|254237105|ref|ZP_04930428.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719]
 gi|296387202|ref|ZP_06876701.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa PAb1]
 gi|313111395|ref|ZP_07797200.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016]
 gi|32363411|sp|Q9HWF7|RS13_PSEAE RecName: Full=30S ribosomal protein S13
 gi|122261425|sp|Q02T58|RS13_PSEAB RecName: Full=30S ribosomal protein S13
 gi|226712778|sp|B7V665|RS13_PSEA8 RecName: Full=30S ribosomal protein S13
 gi|9950458|gb|AAG07629.1|AE004841_7 30S ribosomal protein S13 [Pseudomonas aeruginosa PAO1]
 gi|115587497|gb|ABJ13512.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169036|gb|EAZ54547.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa C3719]
 gi|218769653|emb|CAW25413.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa LESB58]
 gi|310883702|gb|EFQ42296.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa 39016]
 gi|310941721|dbj|BAJ24214.1| 30S ribosomal protein S13 [Pseudomonas aeruginosa]
          Length = 118

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQSICAATGVNPAAKIKDLSDEQIDQLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR + MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-ITTEGDLRREINMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|229818216|ref|ZP_04448498.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM
           20098]
 gi|229784467|gb|EEP20581.1| hypothetical protein BIFANG_03514 [Bifidobacterium angulatum DSM
           20098]
          Length = 125

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   ++       I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKQTLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANFKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|167755936|ref|ZP_02428063.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402]
 gi|237733253|ref|ZP_04563734.1| 30S ribosomal protein S13 [Mollicutes bacterium D7]
 gi|167703928|gb|EDS18507.1| hypothetical protein CLORAM_01456 [Clostridium ramosum DSM 1402]
 gi|229383634|gb|EEO33725.1| 30S ribosomal protein S13 [Coprobacillus sp. D7]
          Length = 121

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q+I  K+ I    RV  L E E+  IR+ I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQEILKKVGINENTRVKDLTEDEIGTIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR VA+NIKRLM++G YRG+RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  ES-IKVEGDLRREVALNIKRLMEIGSYRGIRHRKGLPVRGQKTKTNARTRKGKAKPIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|332178478|gb|AEE14167.1| 30S ribosomal protein S13 [Thermodesulfobium narugense DSM 14796]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++   K+   AL YI+GIG   +  I N   + PE+R+ +L E E+I++R  +
Sbjct: 1   MARIAGVDLAENKKAWVALTYIYGIGKPLAFKILNATGVDPEKRIKELSEDEIIKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEGDLRR VA NI+RL+DLG YRGLRHRRGLPVRGQRT TNARTRK   +   A+
Sbjct: 61  EKNYKVEGDLRREVAQNIRRLIDLGTYRGLRHRRGLPVRGQRTRTNARTRKGPKRLIGAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|264680563|ref|YP_003280473.1| ribosomal protein S13 [Comamonas testosteroni CNB-2]
 gi|299532873|ref|ZP_07046260.1| 30S ribosomal protein S13 [Comamonas testosteroni S44]
 gi|262211079|gb|ACY35177.1| ribosomal protein S13 [Comamonas testosteroni CNB-2]
 gi|298719097|gb|EFI60067.1| 30S ribosomal protein S13 [Comamonas testosteroni S44]
          Length = 121

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  +++ IC    I   ++V  L ++++ +IR  +
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIYGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  -NPMTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|146340079|ref|YP_001205127.1| 30S ribosomal protein S13 [Bradyrhizobium sp. ORS278]
 gi|158706215|sp|A4YSL4|RS13_BRASO RecName: Full=30S ribosomal protein S13
 gi|146192885|emb|CAL76890.1| 30S ribosomal subunit protein S13 [Bradyrhizobium sp. ORS278]
          Length = 122

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 96/122 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRV+ AL YIHGIG K + +I  K+ I  +RRV+QL + EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVLIALQYIHGIGPKIAGEIIEKVKIAEDRRVNQLSDQEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR   +NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYVVEGDLRRETGINIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|56416982|ref|YP_154056.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries]
 gi|222475350|ref|YP_002563767.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida]
 gi|254995158|ref|ZP_05277348.1| 30S ribosomal protein S13 [Anaplasma marginale str. Mississippi]
 gi|255003332|ref|ZP_05278296.1| 30S ribosomal protein S13 [Anaplasma marginale str. Puerto Rico]
 gi|255004456|ref|ZP_05279257.1| 30S ribosomal protein S13 [Anaplasma marginale str. Virginia]
 gi|81358978|sp|Q5PA79|RS13_ANAMM RecName: Full=30S ribosomal protein S13
 gi|254811123|sp|B9KJ49|RS13_ANAMF RecName: Full=30S ribosomal protein S13
 gi|56388214|gb|AAV86801.1| 30S ribosomal protein S13 [Anaplasma marginale str. St. Maries]
 gi|222419488|gb|ACM49511.1| 30S ribosomal protein S13 (rpsM) [Anaplasma marginale str. Florida]
          Length = 123

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I  +  V  L + +V++IR  I
Sbjct: 1   MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICEGCGIGEDVLVSSLSDEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148377784|ref|YP_001256660.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2]
 gi|291320471|ref|YP_003515735.1| 30S ribosomal protein S13 [Mycoplasma agalactiae]
 gi|313678390|ref|YP_004056130.1| 30S ribosomal protein S13 [Mycoplasma bovis PG45]
 gi|226712766|sp|A5IYW1|RS13_MYCAP RecName: Full=30S ribosomal protein S13
 gi|148291830|emb|CAL59220.1| 30S ribosomal protein S13 [Mycoplasma agalactiae PG2]
 gi|290752806|emb|CBH40781.1| 30S ribosomal protein S13 [Mycoplasma agalactiae]
 gi|312950177|gb|ADR24772.1| ribosomal protein S13 [Mycoplasma bovis PG45]
          Length = 123

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 85/121 (70%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG  S+Q+IC K  I    RV  L E+++  IR+ I
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGRTSAQEICAKAKIDENIRVKDLSEAQLSAIRE-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y  EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T +NARTRK   K    +
Sbjct: 60  AKEYVTEGDLRREVSLNIKRLMEVKCYRGIRHRKGLPVRGQSTKSNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis
           L2-32]
 gi|162229911|ref|YP_909208.2| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703]
 gi|171741250|ref|ZP_02917057.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC
           27678]
 gi|212716588|ref|ZP_03324716.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM
           16992]
 gi|224283733|ref|ZP_03647055.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
 gi|225351021|ref|ZP_03742044.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|283455390|ref|YP_003359954.1| 30S ribosomal protein S13P [Bifidobacterium dentium Bd1]
 gi|306823544|ref|ZP_07456919.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679]
 gi|309802871|ref|ZP_07696972.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022]
 gi|310288000|ref|YP_003939259.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17]
 gi|311064873|ref|YP_003971599.1| 30S ribosomal protein S13P RpsM [Bifidobacterium bifidum PRL2010]
 gi|313140889|ref|ZP_07803082.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
 gi|158706364|sp|A1A093|RS13_BIFAA RecName: Full=30S ribosomal protein S13
 gi|154084634|gb|EDN83679.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis
           L2-32]
 gi|171276864|gb|EDT44525.1| hypothetical protein BIFDEN_00325 [Bifidobacterium dentium ATCC
           27678]
 gi|212660292|gb|EEB20867.1| hypothetical protein BIFCAT_01517 [Bifidobacterium catenulatum DSM
           16992]
 gi|225158477|gb|EEG71719.1| hypothetical protein BIFPSEUDO_02603 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|283102024|gb|ADB09130.1| rpsM SSU ribosomal protein S13P [Bifidobacterium dentium Bd1]
 gi|304553251|gb|EFM41163.1| 30S ribosomal protein S13 [Bifidobacterium dentium ATCC 27679]
 gi|308220338|gb|EFO76649.1| 30S ribosomal protein S13 [Bifidobacterium dentium JCVIHMP022]
 gi|309251937|gb|ADO53685.1| 30S ribosomal protein S13 [Bifidobacterium bifidum S17]
 gi|310867193|gb|ADP36562.1| RpsM SSU ribosomal protein S13P [Bifidobacterium bifidum PRL2010]
 gi|313133399|gb|EFR51016.1| 30S ribosomal protein S13 [Bifidobacterium bifidum NCIMB 41171]
          Length = 125

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226227382|ref|YP_002761488.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27]
 gi|259494679|sp|C1A4J3|RS13_GEMAT RecName: Full=30S ribosomal protein S13
 gi|226090573|dbj|BAH39018.1| 30S ribosomal protein S13 [Gemmatimonas aurantiaca T-27]
          Length = 125

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K+V   L YI GIG K++Q I     +   +RV  L ++++ ++RQ I
Sbjct: 1   MARIAGVDLPREKKVEIGLTYIFGIGRKTAQKILEASGVSSAQRVRDLNDNDLNKLRQEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++++VEG LR  VAMNIKRLMD+G YRG RHRRGLPVRGQRTHTNART+K   +    +
Sbjct: 61  ERNHRVEGALRTEVAMNIKRLMDIGSYRGTRHRRGLPVRGQRTHTNARTKKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114315414|gb|ABI61474.1| SSU ribosomal protein S13P [Granulibacter bethesdensis CGDNIH1]
          Length = 137

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/121 (66%), Positives = 98/121 (80%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV  +L YI+GIG   +Q IC +L+IP ERRV+QL + E+++IR+ I+
Sbjct: 14  ARIAGVNIPTNKRVAISLRYIYGIGPAQAQKICTELSIPDERRVNQLSDDEILRIRELID 73

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           ++Y+VEGDLRR VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK        +K
Sbjct: 74  REYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGKAVAIAGKK 133

Query: 122 R 122
           +
Sbjct: 134 K 134


>gi|160894731|ref|ZP_02075506.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50]
 gi|156863665|gb|EDO57096.1| hypothetical protein CLOL250_02282 [Clostridium sp. L2-50]
          Length = 122

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG  SSQ I  +  + P+ R + L + EV +I + I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYVYGIGLASSQRILKEANVNPDTRCNDLTDDEVRRISEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VEGDLRR VA+NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  NATQTVEGDLRREVALNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86606121|ref|YP_474884.1| 30S ribosomal protein S13 [Synechococcus sp. JA-3-3Ab]
 gi|123506458|sp|Q2JUJ3|RS13_SYNJA RecName: Full=30S ribosomal protein S13
 gi|86554663|gb|ABC99621.1| ribosomal protein S13 [Synechococcus sp. JA-3-3Ab]
          Length = 127

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/117 (60%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   S+ I  K  I P+ R   L ++EV  +R  +
Sbjct: 1   MARIAGVDIPRDKRVEIALTYIYGIGLTRSRQILAKTGINPDTRTRDLTDAEVAALRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR  LPVRGQRT TNARTRK   K  
Sbjct: 61  EGEYQVEGDLRRQEAMNIKRLIDIGTYRGRRHRLNLPVRGQRTRTNARTRKGVRKTV 117


>gi|260592741|ref|ZP_05858199.1| 30S ribosomal protein S13 [Prevotella veroralis F0319]
 gi|260535272|gb|EEX17889.1| 30S ribosomal protein S13 [Prevotella veroralis F0319]
          Length = 146

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 21  MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 80

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 81  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 133


>gi|325510514|gb|ADZ22150.1| 30S ribosomal protein S13 [Clostridium acetobutylicum EA 2018]
          Length = 125

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/113 (58%), Positives = 86/113 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  SS+ I    ++ PE RV  L E EV  +R  I
Sbjct: 3   MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK  
Sbjct: 63  NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 115


>gi|323357348|ref|YP_004223744.1| ribosomal protein S13 [Microbacterium testaceum StLB037]
 gi|323273719|dbj|BAJ73864.1| ribosomal protein S13 [Microbacterium testaceum StLB037]
          Length = 124

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV AL YI+G+G   S +I N   I  + RV  L + +++ +R  I
Sbjct: 1   MARLAGVDIPRDKRVVIALTYIYGVGRTRSVEILNATGISQDVRVKDLTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGTYKVEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15925216|ref|NP_372750.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927806|ref|NP_375339.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283874|ref|NP_646962.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2]
 gi|49484442|ref|YP_041666.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487008|ref|YP_044229.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650810|ref|YP_187025.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus COL]
 gi|82751816|ref|YP_417557.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122]
 gi|87159948|ref|YP_494815.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196138|ref|YP_500955.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268666|ref|YP_001247609.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH9]
 gi|150394731|ref|YP_001317406.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1]
 gi|151222340|ref|YP_001333162.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156980541|ref|YP_001442800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3]
 gi|161510430|ref|YP_001576089.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140172|ref|ZP_03564665.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253316987|ref|ZP_04840200.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729892|ref|ZP_04864057.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734365|ref|ZP_04868530.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255007006|ref|ZP_05145607.2| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257423711|ref|ZP_05600140.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257426389|ref|ZP_05602791.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429029|ref|ZP_05605416.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257431675|ref|ZP_05608038.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434635|ref|ZP_05610686.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M876]
 gi|257794572|ref|ZP_05643551.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781]
 gi|258408826|ref|ZP_05681110.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763]
 gi|258422425|ref|ZP_05685337.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719]
 gi|258422673|ref|ZP_05685578.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635]
 gi|258439813|ref|ZP_05690559.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299]
 gi|258442631|ref|ZP_05691191.1| ribosomal protein S13 [Staphylococcus aureus A8115]
 gi|258446671|ref|ZP_05694826.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300]
 gi|258450211|ref|ZP_05698303.1| ribosomal protein S13 [Staphylococcus aureus A6224]
 gi|258450778|ref|ZP_05698837.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948]
 gi|258455417|ref|ZP_05703377.1| ribosomal protein S13 [Staphylococcus aureus A5937]
 gi|269203859|ref|YP_003283128.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893665|ref|ZP_06301897.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117]
 gi|282902129|ref|ZP_06310022.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906569|ref|ZP_06314417.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909539|ref|ZP_06317350.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911787|ref|ZP_06319583.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282915075|ref|ZP_06322852.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917571|ref|ZP_06325323.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920801|ref|ZP_06328519.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282922095|ref|ZP_06329791.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765]
 gi|282925706|ref|ZP_06333354.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282926772|ref|ZP_06334399.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102]
 gi|283767318|ref|ZP_06340233.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19]
 gi|283959004|ref|ZP_06376445.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284025252|ref|ZP_06379650.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus 132]
 gi|293497479|ref|ZP_06665333.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511054|ref|ZP_06669751.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293549660|ref|ZP_06672332.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848759|ref|ZP_06789504.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754]
 gi|295404902|ref|ZP_06814715.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819]
 gi|295428809|ref|ZP_06821433.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296275983|ref|ZP_06858490.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MR1]
 gi|297209961|ref|ZP_06926357.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297243960|ref|ZP_06927850.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796]
 gi|297589705|ref|ZP_06948346.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8]
 gi|300910973|ref|ZP_07128423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304379410|ref|ZP_07362145.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|54039351|sp|P66388|RS13_STAAN RecName: Full=30S ribosomal protein S13
 gi|54039352|sp|P66389|RS13_STAAW RecName: Full=30S ribosomal protein S13
 gi|54042123|sp|P66387|RS13_STAAM RecName: Full=30S ribosomal protein S13
 gi|56749504|sp|Q6G795|RS13_STAAS RecName: Full=30S ribosomal protein S13
 gi|56749551|sp|Q6GEK7|RS13_STAAR RecName: Full=30S ribosomal protein S13
 gi|81693973|sp|Q5HDY2|RS13_STAAC RecName: Full=30S ribosomal protein S13
 gi|91207727|sp|Q2YYM0|RS13_STAAB RecName: Full=30S ribosomal protein S13
 gi|122538866|sp|Q2FW30|RS13_STAA8 RecName: Full=30S ribosomal protein S13
 gi|123484808|sp|Q2FER3|RS13_STAA3 RecName: Full=30S ribosomal protein S13
 gi|166231927|sp|A7X5C7|RS13_STAA1 RecName: Full=30S ribosomal protein S13
 gi|172049007|sp|A6QJ68|RS13_STAAE RecName: Full=30S ribosomal protein S13
 gi|189044299|sp|A6U3V1|RS13_STAA2 RecName: Full=30S ribosomal protein S13
 gi|189044300|sp|A5IV10|RS13_STAA9 RecName: Full=30S ribosomal protein S13
 gi|189044301|sp|A8Z333|RS13_STAAT RecName: Full=30S ribosomal protein S13
 gi|13702026|dbj|BAB43318.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247999|dbj|BAB58388.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205316|dbj|BAB96010.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242571|emb|CAG41292.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49245451|emb|CAG43928.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284996|gb|AAW37090.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus COL]
 gi|82657347|emb|CAI81788.1| 30S ribosomal protein S13 [Staphylococcus aureus RF122]
 gi|87125922|gb|ABD20436.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203696|gb|ABD31506.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741735|gb|ABQ50033.1| SSU ribosomal protein S13P [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947183|gb|ABR53119.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus JH1]
 gi|150375140|dbj|BAF68400.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156722676|dbj|BAF79093.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369239|gb|ABX30210.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253726339|gb|EES95068.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727682|gb|EES96411.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257272729|gb|EEV04831.1| SSU ribosomal protein S13p/S18e [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276020|gb|EEV07471.1| ribosomal protein S13 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279510|gb|EEV10097.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282554|gb|EEV12686.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285231|gb|EEV15347.1| SSU ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M876]
 gi|257788544|gb|EEV26884.1| 30S ribosomal protein S13 [Staphylococcus aureus A9781]
 gi|257840509|gb|EEV64969.1| 30S ribosomal protein S13 [Staphylococcus aureus A9763]
 gi|257841856|gb|EEV66293.1| SSU ribosomal protein S13 [Staphylococcus aureus A9719]
 gi|257847084|gb|EEV71093.1| SSU ribosomal protein S13 [Staphylococcus aureus A9635]
 gi|257847589|gb|EEV71591.1| 30S ribosomal protein S13 [Staphylococcus aureus A9299]
 gi|257851752|gb|EEV75686.1| ribosomal protein S13 [Staphylococcus aureus A8115]
 gi|257854739|gb|EEV77687.1| 30S ribosomal protein S13 [Staphylococcus aureus A6300]
 gi|257856303|gb|EEV79212.1| ribosomal protein S13 [Staphylococcus aureus A6224]
 gi|257861561|gb|EEV84363.1| 30S ribosomal protein S13 [Staphylococcus aureus A5948]
 gi|257862628|gb|EEV85396.1| ribosomal protein S13 [Staphylococcus aureus A5937]
 gi|262076149|gb|ACY12122.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941815|emb|CBI50225.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282312535|gb|EFB42939.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282315216|gb|EFB45600.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318533|gb|EFB48891.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320796|gb|EFB51130.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282323483|gb|EFB53799.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326518|gb|EFB56820.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282329468|gb|EFB58989.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591223|gb|EFB96296.1| 30S ribosomal protein S13 [Staphylococcus aureus A10102]
 gi|282593563|gb|EFB98556.1| 30S ribosomal protein S13 [Staphylococcus aureus A9765]
 gi|282596588|gb|EFC01547.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282763723|gb|EFC03851.1| 30S ribosomal protein S13 [Staphylococcus aureus A8117]
 gi|283461197|gb|EFC08281.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus H19]
 gi|283471448|emb|CAQ50659.1| ribosomal protein S13p/S18e [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283788596|gb|EFC27423.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285817888|gb|ADC38375.1| 30S ribosomal protein S13 [Staphylococcus aureus 04-02981]
 gi|290918707|gb|EFD95783.1| ribosomal protein S13/S18 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096410|gb|EFE26668.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466041|gb|EFF08570.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           M809]
 gi|294824138|gb|EFG40562.1| 30S ribosomal protein S13 [Staphylococcus aureus A9754]
 gi|294969847|gb|EFG45865.1| 30S ribosomal protein S13 [Staphylococcus aureus A8819]
 gi|295127158|gb|EFG56800.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296885634|gb|EFH24571.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178738|gb|EFH37983.1| 30S ribosomal protein S13 [Staphylococcus aureus A8796]
 gi|297578216|gb|EFH96929.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus MN8]
 gi|298695483|gb|ADI98705.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887953|gb|EFK83148.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333862|gb|ADL24055.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302752099|gb|ADL66276.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304341942|gb|EFM07846.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312437363|gb|ADQ76434.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312830575|emb|CBX35417.1| 30S ribosomal protein S13 (BS14) [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129694|gb|EFT85685.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193478|gb|EFU23874.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198244|gb|EFU28575.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140236|gb|EFW32095.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143506|gb|EFW35287.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323440094|gb|EGA97809.1| 30S ribosomal protein S13 [Staphylococcus aureus O11]
 gi|323442768|gb|EGB00394.1| 30S ribosomal protein S13 [Staphylococcus aureus O46]
 gi|329314909|gb|AEB89322.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723637|gb|EGG60166.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329730351|gb|EGG66741.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21193]
 gi|329732010|gb|EGG68365.1| 30S ribosomal protein S13 [Staphylococcus aureus subsp. aureus
           21189]
          Length = 121

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  D-GYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|315640138|ref|ZP_07895260.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952]
 gi|315484115|gb|EFU74589.1| 30S ribosomal protein S13 [Enterococcus italicus DSM 15952]
          Length = 121

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I     +  E RV  L   +   IR  I
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKQILANAGVSEEVRVRDLTNDQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR + +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREINLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|206895241|ref|YP_002247310.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM
           5265]
 gi|226712721|sp|B5Y963|RS13_COPPD RecName: Full=30S ribosomal protein S13
 gi|206737858|gb|ACI16936.1| ribosomal protein S13p/S18e [Coprothermobacter proteolyticus DSM
           5265]
          Length = 124

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  KR+V AL  I+GIG  +++DIC  L I P +++ +L   ++  ++  I
Sbjct: 1   MARIVGVELPDNKRIVFALPRIYGIGKSTAEDICEALGIDPMQKLGELTPEQINTLQDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y+VEGDLRR VAMNIKRLMD+ CYRG+RH+RGLPVRGQRT  NARTRK   K   A+
Sbjct: 61  TAHYKVEGDLRREVAMNIKRLMDIKCYRGIRHQRGLPVRGQRTRHNARTRKGPRKTVGAK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|325267154|ref|ZP_08133822.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394]
 gi|324981392|gb|EGC17036.1| ribosomal protein S13p/S18e [Kingella denitrificans ATCC 33394]
          Length = 120

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   +++IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKNICEVAGIAPATKVKDLDESQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V MNIKRL+D+GCYRG+RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMNIKRLIDMGCYRGMRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|21223106|ref|NP_628885.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)]
 gi|256785798|ref|ZP_05524229.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
 gi|289769690|ref|ZP_06529068.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
 gi|6226063|sp|O86773|RS13_STRCO RecName: Full=30S ribosomal protein S13
 gi|3449239|emb|CAA20383.1| 30S ribosomal protein S13 [Streptomyces coelicolor A3(2)]
 gi|289699889|gb|EFD67318.1| 30S ribosomal protein S13 [Streptomyces lividans TK24]
          Length = 126

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR V  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREVQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|113869408|ref|YP_727897.1| 30S ribosomal protein S13 [Ralstonia eutropha H16]
 gi|123328830|sp|Q0K642|RS13_RALEH RecName: Full=30S ribosomal protein S13
 gi|113528184|emb|CAJ94529.1| SSU ribosomal protein S13 [Ralstonia eutropha H16]
          Length = 121

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K     L  I+G+G   ++ IC    +P +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIGLTAIYGVGRSRARKICEATGVPFDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  GK-VTVEGDLRRETTMNIKRLMDLGCYRGMRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|120553674|ref|YP_958025.1| 30S ribosomal protein S13 [Marinobacter aquaeolei VT8]
 gi|158706245|sp|A1TYL9|RS13_MARAV RecName: Full=30S ribosomal protein S13
 gi|120323523|gb|ABM17838.1| SSU ribosomal protein S13P [Marinobacter aquaeolei VT8]
          Length = 118

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGKTTAQKLCDATGVKPDAKVKDLSDEQLEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVQMNIKRLKDLGCFRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116


>gi|239980031|ref|ZP_04702555.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
 gi|291451888|ref|ZP_06591278.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
 gi|291354837|gb|EFE81739.1| 30S ribosomal protein S13 [Streptomyces albus J1074]
          Length = 126

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTLSQQTLEATGVDPNARVRDLSEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254440445|ref|ZP_05053939.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307]
 gi|198255891|gb|EDY80205.1| ribosomal protein S13p/S18e [Octadecabacter antarcticus 307]
          Length = 139

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 76/121 (62%), Positives = 88/121 (72%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP AKRV  AL YI GIG  S+  IC  + I   RRV++L ++EV+ IR+ I+
Sbjct: 19  ARIAGVNIPTAKRVPIALTYITGIGNTSAAAICEAVKIDVTRRVNELSDAEVLAIREHID 78

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +Y VEGDLRR V MNIKR MDLG YRGLRHRR LPVRGQRT TNARTRK   K    +K
Sbjct: 79  ANYMVEGDLRREVQMNIKRAMDLGSYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGKK 138

Query: 122 R 122
           +
Sbjct: 139 K 139


>gi|295401895|ref|ZP_06811858.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109286|ref|YP_003987602.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1]
 gi|294976025|gb|EFG51640.1| 30S ribosomal protein S13 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214387|gb|ADP72991.1| 30S ribosomal protein S13 [Geobacillus sp. Y4.1MC1]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  SR-LKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|224477196|ref|YP_002634802.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254811165|sp|B9DM53|RS13_STACT RecName: Full=30S ribosomal protein S13
 gi|222421803|emb|CAL28617.1| 30S ribosomal protein S13 [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+G+G  ++  I  +  + P+ RV  L + E+ +IR+ +
Sbjct: 1   MARIAGIDIPREKRVVISLTYIYGVGKSTAAKILEEANVSPDTRVKDLTDDELGRIRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  DA-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|56418666|ref|YP_145984.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426]
 gi|138893808|ref|YP_001124261.1| 30S ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2]
 gi|196250999|ref|ZP_03149681.1| ribosomal protein S13 [Geobacillus sp. G11MC16]
 gi|297528507|ref|YP_003669782.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3]
 gi|81348360|sp|Q5L3R4|RS13_GEOKA RecName: Full=30S ribosomal protein S13
 gi|158706233|sp|A4IJL2|RS13_GEOTN RecName: Full=30S ribosomal protein S13
 gi|56378508|dbj|BAD74416.1| 30S ribosomal protein S13 [Geobacillus kaustophilus HTA426]
 gi|134265321|gb|ABO65516.1| Ribosomal protein S13 [Geobacillus thermodenitrificans NG80-2]
 gi|196209471|gb|EDY04248.1| ribosomal protein S13 [Geobacillus sp. G11MC16]
 gi|297251759|gb|ADI25205.1| 30S ribosomal protein S13 [Geobacillus sp. C56-T3]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTAQKILKEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300508617|pdb|3MR8|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508672|pdb|3MS0|M Chain M, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s)
          Length = 117

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/117 (59%), Positives = 85/117 (72%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K   
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVA 117


>gi|311748490|ref|ZP_07722275.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
 gi|126577007|gb|EAZ81255.1| 30S ribosomal protein S13 [Algoriphagus sp. PR1]
          Length = 125

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR    L YI GIG  S++ I +K  I  +++  +  + E   IR  I
Sbjct: 1   MARIAGVDIPDNKRGEIGLTYIFGIGRSSAKAILSKAGISFDKKAGEWDDDESTAIRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++++ EG L+  + +NIKRLMD+GCYRGLRHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 61  AEEFRTEGVLKSEIQLNIKRLMDIGCYRGLRHRKGLPVRGQHTKNNARTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|319944773|ref|ZP_08019037.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599]
 gi|319742022|gb|EFV94445.1| 30S ribosomal protein S13 [Lautropia mirabilis ATCC 51599]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   +Q IC  + I P ++V  L ++E+ +IR  +
Sbjct: 1   MARIAGVNVPDRQHTVIGLTAIYGIGRARAQAICAAVGIEPSKKVRDLSDAEMERIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K GVA 
Sbjct: 61  GR-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPSKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|222099992|ref|YP_002534560.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
 gi|254811172|sp|B9K8B1|RS13_THENN RecName: Full=30S ribosomal protein S13
 gi|221572382|gb|ACM23194.1| 30S ribosomal protein S13 [Thermotoga neapolitana DSM 4359]
          Length = 125

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+V  AL YI+GIG   S +I     + P++RV +L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGVDPDKRVGELTDEEISKITKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  ++VEG+LR  V  NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK      +  
Sbjct: 61  QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRKGPRPSRIKT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|299820979|ref|ZP_07052868.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601]
 gi|299818000|gb|EFI85235.1| 30S ribosomal protein S13 [Listeria grayi DSM 20601]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG  +++ +  +  + PE R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKTTAEKVLAEAGVSPETRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|184200287|ref|YP_001854494.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201]
 gi|226712750|sp|B2GJ18|RS13_KOCRD RecName: Full=30S ribosomal protein S13
 gi|183580517|dbj|BAG28988.1| 30S ribosomal protein S13 [Kocuria rhizophila DC2201]
          Length = 122

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+G+G   + +      I  + RV  L + +++++R  I
Sbjct: 1   MARLAGVDLPREKRLEVALTYIYGVGRTRALETLEATGISGDVRVKDLTDPQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|221064826|ref|ZP_03540931.1| ribosomal protein S13 [Comamonas testosteroni KF-1]
 gi|220709849|gb|EED65217.1| ribosomal protein S13 [Comamonas testosteroni KF-1]
          Length = 121

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG  +++ IC    I   ++V  L ++++ +IR  +
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTTARKICEACGIEYSKKVKDLTDADLEKIRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  -NPMTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|325135171|gb|EGC57797.1| ribosomal protein S13p/S18e [Neisseria meningitidis M13399]
          Length = 120

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P+ +   L E+++  +R  I
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|296141065|ref|YP_003648308.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162]
 gi|296029199|gb|ADG79969.1| 30S ribosomal protein S13 [Tsukamurella paurometabola DSM 20162]
          Length = 123

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +I     + P+ R   L + ++ ++R  I
Sbjct: 1   MARLMGVDLPREKRMEIALTYIYGIGRTRATEILTATGVSPDLRSKDLSDEDLTKLRDFI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  DY+VEGDLRR V  +I+R +++ CY+G+RHRRGLPVRGQRT TNARTRK   K    
Sbjct: 61  EGTDYKVEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|309389909|gb|ADO77789.1| SSU ribosomal protein S13P [Halanaerobium praevalens DSM 2228]
          Length = 126

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 67/123 (54%), Positives = 86/123 (69%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++Q I     I  + R+  L E+E+  +R+ I
Sbjct: 1   MARIEGVDLPRNKRVEIGLTYIYGIGRTTAQSIVANTGINSDTRIKDLTEAEISDLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           +++Y VEG+LRR    +IKRL D+GCYRGLRHRRGLPVRGQRT TNARTRK   K  GV 
Sbjct: 61  DENYIVEGELRREKRADIKRLKDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVGVT 120

Query: 120 RKR 122
           + +
Sbjct: 121 KTK 123


>gi|315501406|ref|YP_004080293.1| 30S ribosomal protein s13 [Micromonospora sp. L5]
 gi|315408025|gb|ADU06142.1| 30S ribosomal protein S13 [Micromonospora sp. L5]
          Length = 126

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++RV  L + E++++R  I
Sbjct: 1   MARLVGVDLPREKRMEIALTYIFGVGRTRALETLAATGISPDKRVRDLTDEELVELRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|258513665|ref|YP_003189887.1| 30S ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771]
 gi|257777370|gb|ACV61264.1| ribosomal protein S13 [Desulfotomaculum acetoxidans DSM 771]
          Length = 123

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/123 (58%), Positives = 95/123 (77%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG K+SQ I  K  + P+ R+  L E E+ ++R+ I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIYGIGKKTSQKIIEKTGVNPDTRIRNLTEDEINKLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GVA 119
           E++ ++EGDLRR +A+NIKRL+++GCYRGLRHRRGLPVRGQ+T TNARTRK   +  GV 
Sbjct: 61  EKNCKIEGDLRREIALNIKRLIEIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRTVGVR 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|15828062|ref|NP_302325.1| 30S ribosomal protein S13 [Mycobacterium leprae TN]
 gi|221230539|ref|YP_002503955.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
 gi|7388130|sp|Q9X7A1|RS13_MYCLE RecName: Full=30S ribosomal protein S13
 gi|254811158|sp|B8ZSH9|RS13_MYCLB RecName: Full=30S ribosomal protein S13
 gi|4539115|emb|CAB39836.1| putative 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|13093615|emb|CAC30915.1| 30S ribosomal protein S13 [Mycobacterium leprae]
 gi|219933646|emb|CAR72057.1| 30S ribosomal protein S13 [Mycobacterium leprae Br4923]
          Length = 124

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIYGIGRTRANEILEATGIERDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R M++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKMEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|114319641|ref|YP_741324.1| 30S ribosomal protein S13 [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312437|sp|Q0ABF3|RS13_ALHEH RecName: Full=30S ribosomal protein S13
 gi|114226035|gb|ABI55834.1| SSU ribosomal protein S13P [Alkalilimnicola ehrlichii MLHE-1]
          Length = 119

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 89/120 (74%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G   ++ IC++  +P +R+V +L E E+  IR A+
Sbjct: 1   MARIAGVNIPVHKHAWVALTSIYGVGRTRAKAICDEAGVPRDRKVKELTEQELEAIRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR VAM+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   +G   +
Sbjct: 61  GK-YEVEGDLRRAVAMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRKGPRRGPAGK 119


>gi|241759635|ref|ZP_04757736.1| 30S ribosomal protein S13 [Neisseria flavescens SK114]
 gi|241320007|gb|EER56388.1| 30S ribosomal protein S13 [Neisseria flavescens SK114]
          Length = 120

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPSTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|15676092|ref|NP_273223.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58]
 gi|59802138|ref|YP_208850.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090]
 gi|121634039|ref|YP_974284.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18]
 gi|161870897|ref|YP_001600072.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442]
 gi|218767145|ref|YP_002341657.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491]
 gi|239997948|ref|ZP_04717872.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|240015074|ref|ZP_04721987.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI18]
 gi|240017523|ref|ZP_04724063.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA6140]
 gi|240081666|ref|ZP_04726209.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|240113944|ref|ZP_04728434.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|240116678|ref|ZP_04730740.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|240118900|ref|ZP_04732962.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|240122146|ref|ZP_04735108.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID24-1]
 gi|240124438|ref|ZP_04737394.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|240124693|ref|ZP_04737579.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|240129114|ref|ZP_04741775.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494699|ref|ZP_05107870.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291]
 gi|254805791|ref|YP_003084012.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14]
 gi|260439563|ref|ZP_05793379.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|268593798|ref|ZP_06127965.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|268597763|ref|ZP_06131930.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|268600008|ref|ZP_06134175.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|268602345|ref|ZP_06136512.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|268604609|ref|ZP_06138776.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|268683066|ref|ZP_06149928.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|268683267|ref|ZP_06150129.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|268687496|ref|ZP_06154358.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|291042799|ref|ZP_06568540.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|293398180|ref|ZP_06642385.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62]
 gi|296313387|ref|ZP_06863328.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768]
 gi|304388965|ref|ZP_07371012.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091]
 gi|54039350|sp|P66386|RS13_NEIMB RecName: Full=30S ribosomal protein S13
 gi|54042122|sp|P66385|RS13_NEIMA RecName: Full=30S ribosomal protein S13
 gi|75355451|sp|Q5F5U9|RS13_NEIG1 RecName: Full=30S ribosomal protein S13
 gi|158706255|sp|A1KRJ6|RS13_NEIMF RecName: Full=30S ribosomal protein S13
 gi|189044283|sp|A9M3U3|RS13_NEIM0 RecName: Full=30S ribosomal protein S13
 gi|7225383|gb|AAF40622.1| 30S ribosomal protein S13 [Neisseria meningitidis MC58]
 gi|59719033|gb|AAW90438.1| putative 30S ribosomal protein S13 [Neisseria gonorrhoeae FA 1090]
 gi|120865745|emb|CAM09474.1| 30S ribosomal protein S13 [Neisseria meningitidis FAM18]
 gi|121051153|emb|CAM07424.1| 30S ribosomal protein S13 [Neisseria meningitidis Z2491]
 gi|161596450|gb|ABX74110.1| 30S ribosomal protein S13 [Neisseria meningitidis 053442]
 gi|226513739|gb|EEH63084.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 1291]
 gi|254669333|emb|CBA08378.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha14]
 gi|254670760|emb|CBA07029.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha153]
 gi|254672690|emb|CBA06582.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha275]
 gi|261391701|emb|CAX49150.1| 30S ribosomal protein S13 [Neisseria meningitidis 8013]
 gi|268547187|gb|EEZ42605.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae 35/02]
 gi|268551551|gb|EEZ46570.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae FA19]
 gi|268584139|gb|EEZ48815.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae MS11]
 gi|268586476|gb|EEZ51152.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID18]
 gi|268588740|gb|EEZ53416.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID1]
 gi|268623350|gb|EEZ55750.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae PID332]
 gi|268623551|gb|EEZ55951.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-92-679]
 gi|268627780|gb|EEZ60180.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae SK-93-1035]
 gi|291013233|gb|EFE05199.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae DGI2]
 gi|291611443|gb|EFF40513.1| 30S ribosomal protein S13 [Neisseria gonorrhoeae F62]
 gi|296840097|gb|EFH24035.1| 30S ribosomal protein S13 [Neisseria polysaccharea ATCC 43768]
 gi|304337099|gb|EFM03286.1| 30S ribosomal protein S13 [Neisseria meningitidis ATCC 13091]
 gi|308388381|gb|ADO30701.1| 30S ribosomal protein S13 [Neisseria meningitidis alpha710]
 gi|319411351|emb|CBY91762.1| 30S ribosomal protein S13 [Neisseria meningitidis WUE 2594]
 gi|325129084|gb|EGC51933.1| ribosomal protein S13p/S18e [Neisseria meningitidis N1568]
 gi|325131055|gb|EGC53779.1| ribosomal protein S13p/S18e [Neisseria meningitidis OX99.30304]
 gi|325133077|gb|EGC55749.1| ribosomal protein S13p/S18e [Neisseria meningitidis M6190]
 gi|325137223|gb|EGC59818.1| ribosomal protein S13p/S18e [Neisseria meningitidis M0579]
 gi|325139055|gb|EGC61601.1| ribosomal protein S13p/S18e [Neisseria meningitidis ES14902]
 gi|325141178|gb|EGC63678.1| ribosomal protein S13p/S18e [Neisseria meningitidis CU385]
 gi|325143255|gb|EGC65594.1| ribosomal protein S13p/S18e [Neisseria meningitidis 961-5945]
 gi|325145362|gb|EGC67639.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240013]
 gi|325197452|gb|ADY92908.1| ribosomal protein S13p/S18e [Neisseria meningitidis G2136]
 gi|325199378|gb|ADY94833.1| ribosomal protein S13p/S18e [Neisseria meningitidis H44/76]
 gi|325203000|gb|ADY98454.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240149]
 gi|325203285|gb|ADY98738.1| ribosomal protein S13p/S18e [Neisseria meningitidis M01-240355]
 gi|325205258|gb|ADZ00711.1| ribosomal protein S13p/S18e [Neisseria meningitidis M04-240196]
 gi|325207202|gb|ADZ02654.1| hypothetical protein NMBNZ0533_0169 [Neisseria meningitidis
           NZ-05/33]
          Length = 120

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P+ +   L E+++  +R  +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTKAKDLDETQLDALRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|152989995|ref|YP_001355717.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2]
 gi|158706256|sp|A6Q1K1|RS13_NITSB RecName: Full=30S ribosomal protein S13
 gi|151421856|dbj|BAF69360.1| 30S ribosomal protein S13 [Nitratiruptor sp. SB155-2]
          Length = 120

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 91/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL Y++GIG  +S+ I + + I  ++RV++L E EV  I + I
Sbjct: 1   MARIAGVDLPKNKRIEYALPYVYGIGLTTSRKILDAVGISYDKRVYELTEDEVAAINKHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEGDLRR VAM+IK LMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K   A+
Sbjct: 61  RENYMVEGDLRRKVAMDIKALMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGKKKTVGAK 120


>gi|161897604|ref|YP_948629.2| 30S ribosomal protein S13 [Arthrobacter aurescens TC1]
 gi|158706372|sp|A1R8R7|RS13_ARTAT RecName: Full=30S ribosomal protein S13
          Length = 125

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L ++E++Q+R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAELVQLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|34499618|ref|NP_903833.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472]
 gi|81654192|sp|Q7NQH4|RS13_CHRVO RecName: Full=30S ribosomal protein S13
 gi|34105469|gb|AAQ61824.1| 30S ribosomal protein S13 [Chromobacterium violaceum ATCC 12472]
          Length = 120

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP     V  L  I G+G   +Q IC   ++ P  +V  L E+E+  +R  +
Sbjct: 1   MARIAGVNIPNHAHAVIGLQAIFGVGQTRAQQICAAASVNPSTKVKDLTEAEMEALRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-FTVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|291521875|emb|CBK80168.1| 30S ribosomal protein S13 [Coprococcus catus GD/7]
          Length = 123

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/123 (52%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y++GIG  +S  +  +  + P+ RV  L + EV +IR AI
Sbjct: 1   MARISGVDLPRDKRIEIGLTYVYGIGRATSNRLLKEAGVNPDTRVRDLTDEEVGKIRDAI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           + D   +EGDLRR +A+NIKRL ++GCYRG+RHR+GLPVRGQ+T TNARTRK   K    
Sbjct: 61  DADSILIEGDLRREIAINIKRLQEIGCYRGIRHRKGLPVRGQKTKTNARTRKGPKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|288919687|ref|ZP_06414014.1| ribosomal protein S13 [Frankia sp. EUN1f]
 gi|288348876|gb|EFC83126.1| ribosomal protein S13 [Frankia sp. EUN1f]
          Length = 126

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S++      + P+ RV  L + EV ++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSKETLAATGVNPDTRVRDLTDEEVQKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|302553567|ref|ZP_07305909.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471185|gb|EFL34278.1| 30S ribosomal protein S13 [Streptomyces viridochromogenes DSM
           40736]
          Length = 126

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPRDKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|308272956|emb|CBX29560.1| 30S ribosomal protein S13 [uncultured Desulfobacterium sp.]
          Length = 127

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/116 (59%), Positives = 88/116 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KRV   L YI+GIG   S+ I +KL I P+ +V QL E+E+  IRQ I
Sbjct: 1   MARISGVDLPKHKRVEIGLTYIYGIGRSMSKSILSKLNINPDTKVDQLSETEINSIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +Y+VEG+LR  ++MNIKRLMDLGCYRGLRHR+ LPVRGQRT TN+RTRK   + 
Sbjct: 61  NTEYKVEGELRTDISMNIKRLMDLGCYRGLRHRKSLPVRGQRTKTNSRTRKGPKRS 116


>gi|300690183|ref|YP_003751178.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07]
 gi|299077243|emb|CBJ49869.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum PSI07]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I+G+G   +Q IC    +P  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAVIGLTAIYGVGRSRAQKICEATGVPTNKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K G+A 
Sbjct: 61  -NRFTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRKAGIAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|162456222|ref|YP_001618589.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56']
 gi|189044298|sp|A9FGC9|RS13_SORC5 RecName: Full=30S ribosomal protein S13
 gi|161166804|emb|CAN98109.1| 30S ribosomal protein S13 [Sorangium cellulosum 'So ce 56']
          Length = 126

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 74/121 (61%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K V  AL Y+ GIG   +  IC K  IP  +RV +L ++EV  IR  +
Sbjct: 1   MARIAGVDLPRRKHVAYALPYLFGIGRTLALQICEKTNIPQNKRVEELSDAEVKAIRDLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP  GQRTHTNARTRK   KG + R
Sbjct: 61  DAEYKVEGDLRREVQLNIKRLMDLGCYRGLRHRRGLPANGQRTHTNARTRKGPRKGMLQR 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|57242512|ref|ZP_00370450.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195]
 gi|315639082|ref|ZP_07894250.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21]
 gi|57016797|gb|EAL53580.1| ribosomal protein S13p/S18e [Campylobacter upsaliensis RM3195]
 gi|315480858|gb|EFU71494.1| ribosomal protein S13/S18 [Campylobacter upsaliensis JV21]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|86158345|ref|YP_465130.1| 30S ribosomal protein S13 [Anaeromyxobacter dehalogenans 2CP-C]
 gi|197122363|ref|YP_002134314.1| 30S ribosomal protein S13 [Anaeromyxobacter sp. K]
 gi|123497979|sp|Q2IJ63|RS13_ANADE RecName: Full=30S ribosomal protein S13
 gi|226712688|sp|B4UBC3|RS13_ANASK RecName: Full=30S ribosomal protein S13
 gi|85774856|gb|ABC81693.1| SSU ribosomal protein S13P [Anaeromyxobacter dehalogenans 2CP-C]
 gi|196172212|gb|ACG73185.1| ribosomal protein S13 [Anaeromyxobacter sp. K]
          Length = 128

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 72/118 (61%), Positives = 91/118 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  +L YI+GIG  S++ I  +  + P  R   L + EV +IR+ I
Sbjct: 1   MARIAGVDLPREKRIEVSLQYIYGIGKTSAKLILERANVSPVTRTKDLTDDEVRRIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           EQ+ +VEGDLRR +++N+KRLMDLGCYRGLRHR+GLPVRGQRTHTNARTRK   KG V
Sbjct: 61  EQNVKVEGDLRREISLNVKRLMDLGCYRGLRHRKGLPVRGQRTHTNARTRKGPKKGLV 118


>gi|328884452|emb|CCA57691.1| SSU ribosomal protein S13p [Streptomyces venezuelae ATCC 10712]
          Length = 126

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRVV AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVVVALTYVFGIGRTRSEEILAATGVNPSTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + Q EGDLRR +A +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DANLQTEGDLRREIAADIRRKVEIGCYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|255067436|ref|ZP_05319291.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256]
 gi|261380581|ref|ZP_05985154.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703]
 gi|319639571|ref|ZP_07994318.1| 30S ribosomal protein S13 [Neisseria mucosa C102]
 gi|255048231|gb|EET43695.1| 30S ribosomal protein S13 [Neisseria sicca ATCC 29256]
 gi|284796549|gb|EFC51896.1| 30S ribosomal protein S13 [Neisseria subflava NJ9703]
 gi|317399142|gb|EFV79816.1| 30S ribosomal protein S13 [Neisseria mucosa C102]
          Length = 120

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|94968279|ref|YP_590327.1| 30S ribosomal protein S13 [Candidatus Koribacter versatilis
           Ellin345]
 gi|158706207|sp|Q1IS97|RS13_ACIBL RecName: Full=30S ribosomal protein S13
 gi|94550329|gb|ABF40253.1| SSU ribosomal protein S13P [Candidatus Koribacter versatilis
           Ellin345]
          Length = 127

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K +  AL YI GIG   ++ I  +  +   R+V  L E EV +IR AI
Sbjct: 1   MARIAGVDLPRNKYINIALTYIFGIGNSRAKAILAEANVEANRKVSDLNEEEVNRIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E    VEGDLR+ V+M+IKRL+++G YRG RHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  ENGSSVEGDLRKDVSMHIKRLIEIGSYRGYRHRRSLPVRGQRTHTNARTRKGPRKGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|126654304|ref|ZP_01726074.1| 30S ribosomal protein S13 [Bacillus sp. B14905]
 gi|169830007|ref|YP_001700165.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41]
 gi|299541956|ref|ZP_07052279.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1]
 gi|226712758|sp|B1HMV7|RS13_LYSSC RecName: Full=30S ribosomal protein S13
 gi|126589233|gb|EAZ83396.1| 30S ribosomal protein S13 [Bacillus sp. B14905]
 gi|168994495|gb|ACA42035.1| 30S ribosomal protein S13 [Lysinibacillus sphaericus C3-41]
 gi|298725694|gb|EFI66335.1| 30S ribosomal protein S13 [Lysinibacillus fusiformis ZC1]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +     I  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKTTAQKVLADAGISEDTRVRDLTEDELNKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y++EGDLRR  ++NIKRLM++G +RG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DS-YKLEGDLRRETSLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|41410328|ref|NP_963164.1| 30S ribosomal protein S13 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254776833|ref|ZP_05218349.1| 30S ribosomal protein S13 [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|81412936|sp|Q73S46|RS13_MYCPA RecName: Full=30S ribosomal protein S13
 gi|158706370|sp|A0QKU8|RS13_MYCA1 RecName: Full=30S ribosomal protein S13
 gi|41399162|gb|AAS06780.1| RpsM [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 124

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|329118618|ref|ZP_08247322.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465353|gb|EGF11634.1| ribosomal protein S13p/S18e [Neisseria bacilliformis ATCC BAA-1200]
          Length = 120

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +V  L ES++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGNSRAKLICEMTGIIPSTKVKDLDESQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|311029075|ref|ZP_07707165.1| 30S ribosomal protein S13 [Bacillus sp. m3-13]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV +L Y+ GIG  +++ +  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDVPRDKRVVISLTYVFGIGRSTAEKVLAEAGVSEDTRVRDLTEEELGKIRDVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  DK-IKVEGDLRREVSLNIKRLIEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|225024810|ref|ZP_03714002.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC
           23834]
 gi|224942413|gb|EEG23622.1| hypothetical protein EIKCOROL_01697 [Eikenella corrodens ATCC
           23834]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP    VV  L  I+GIG   ++ ICN  AI P+ +V  L E ++  +R+ +
Sbjct: 1   MARVAGVNIPNNAHVVIGLQAIYGIGASRAKLICNNAAIAPDTKVKDLTEGQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q Y+VEGDLRR + MNIKRL+D+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AQ-YEVEGDLRREITMNIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|322436521|ref|YP_004218733.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9]
 gi|321164248|gb|ADW69953.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX9]
          Length = 126

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V   L YI+GIG   +  I     I P  +V  L E ++  IRQ I
Sbjct: 1   MARIAGVDVPNNKQVRIGLTYIYGIGDSRAAKILTAADIDPIAKVGTLDEDQLNAIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+   +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EKQGMIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|299138170|ref|ZP_07031350.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8]
 gi|298600100|gb|EFI56258.1| 30S ribosomal protein S13 [Acidobacterium sp. MP5ACTX8]
          Length = 126

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+   AL YI+GIG   +  I     I P  ++  L E ++  IRQ I
Sbjct: 1   MARIAGVDLPGNKQARIALTYIYGIGDPRALRILTAAGIDPLAKMGTLDEDQLNAIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EKEGGIEGDLRKEISLNIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|192360555|ref|YP_001981230.1| 30S ribosomal protein S13 [Cellvibrio japonicus Ueda107]
 gi|226712710|sp|B3PK59|RS13_CELJU RecName: Full=30S ribosomal protein S13
 gi|190686720|gb|ACE84398.1| ribosomal protein S13p/S18e [Cellvibrio japonicus Ueda107]
          Length = 118

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG  +++ IC    I  + ++  L E ++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVYGIGRTTAKQICAATGIAEDTKIGTLSEEQMDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-HTVEGDLRREINMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|323490647|ref|ZP_08095852.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2]
 gi|323395739|gb|EGA88580.1| 30S ribosomal protein S13 [Planococcus donghaensis MPA1U2]
          Length = 121

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI G+G  ++Q + +   I  E RV  L E E+  IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGVGKTTAQKVLSAAGISEETRVRDLTEDELNNIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y++EGDLRR V+MNIKRLM++  +RG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DQ-YKIEGDLRREVSMNIKRLMEIASFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|203284410|ref|YP_002222150.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
 gi|203287944|ref|YP_002222959.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
 gi|226712699|sp|B5RM58|RS13_BORDL RecName: Full=30S ribosomal protein S13
 gi|226712702|sp|B5RPK4|RS13_BORRA RecName: Full=30S ribosomal protein S13
 gi|201083853|gb|ACH93444.1| 30S ribosomal protein S13 [Borrelia duttonii Ly]
 gi|201085164|gb|ACH94738.1| 30S ribosomal protein S13 [Borrelia recurrentis A1]
          Length = 125

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  I PE+R   L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRSRALEICKKTGILPEKRAKDLDNEEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|90417745|ref|ZP_01225657.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1]
 gi|90337417|gb|EAS51068.1| ribosomal protein S13 [Aurantimonas manganoxydans SI85-9A1]
          Length = 122

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 82/122 (67%), Positives = 97/122 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG   ++DI  K+ +  ERRV+ L ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAAHAKDIVKKVNLGDERRVNDLTDAEVLQIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY+VEGDLRR  AMN+KRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYRVEGDLRRETAMNVKRLMDLGCYRGLRHRRSLPVRGQRTHTNARTRKGPAKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|258406162|ref|YP_003198904.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692]
 gi|257798389|gb|ACV69326.1| 30S ribosomal protein S13 [Desulfohalobium retbaense DSM 5692]
          Length = 123

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR   AL YI+GIG  ++  I + + +   ++   L   EV  IR  +
Sbjct: 1   MARIAGVDLPRNKRADIALTYIYGIGRTTALAILDSVGVDWTKKTDALSNDEVNSIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y+VEGDLRR V  NIKRLMD+GCYRGLRHRR LP RGQRT TNARTRK   +  + +
Sbjct: 61  EKTYKVEGDLRREVRANIKRLMDIGCYRGLRHRRSLPARGQRTGTNARTRKGPRRAVMGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|108804950|ref|YP_644887.1| 30S ribosomal protein S13 [Rubrobacter xylanophilus DSM 9941]
 gi|123177177|sp|Q1AU53|RS13_RUBXD RecName: Full=30S ribosomal protein S13
 gi|108766193|gb|ABG05075.1| SSU ribosomal protein S13P [Rubrobacter xylanophilus DSM 9941]
          Length = 122

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG  +++ +  +  + P+ RV  L E E+  +R+ I
Sbjct: 1   MARIAGVDLPREKRIEVALTYIYGIGRSTARRVIRETGVDPDTRVRDLAEGEIAALRRYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDL+R V  NI+RLMD+GCYRGLRHRRGLPVRGQRT TNAR RK        R
Sbjct: 61  DENLKVEGDLKREVNQNIRRLMDIGCYRGLRHRRGLPVRGQRTKTNARQRKGPRPAIGGR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15896358|ref|NP_349707.1| 30S ribosomal protein S13 [Clostridium acetobutylicum ATCC 824]
 gi|32363381|sp|Q97EK3|RS13_CLOAB RecName: Full=30S ribosomal protein S13
 gi|15026173|gb|AAK81047.1|AE007807_5 Ribosomal protein S13 [Clostridium acetobutylicum ATCC 824]
          Length = 123

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/113 (58%), Positives = 86/113 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  SS+ I    ++ PE RV  L E EV  +R  I
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLTSSRKIIKATSVNPETRVKDLTEEEVNALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            +++++EGDLRR VA+NIKRL+++GCYRG+RHRRGLPVRGQ+T TNARTRK  
Sbjct: 61  NKNFKIEGDLRREVALNIKRLVEIGCYRGIRHRRGLPVRGQKTKTNARTRKGP 113


>gi|167749413|ref|ZP_02421540.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702]
 gi|167657585|gb|EDS01715.1| hypothetical protein EUBSIR_00367 [Eubacterium siraeum DSM 15702]
 gi|291532115|emb|CBK97700.1| SSU ribosomal protein S13P [Eubacterium siraeum 70/3]
 gi|291558145|emb|CBL35262.1| SSU ribosomal protein S13P [Eubacterium siraeum V10Sc8a]
          Length = 123

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L Y++GIG K++ DI  K  + P+ RV  L + +  +IR AI
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYVYGIGRKTANDILAKAGVNPDTRVKDLTDDDEAKIRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           EQ    VEGDLRR VA+NIKRL+++ C+RG RHR+GLPVRGQRT TNARTRK   K    
Sbjct: 61  EQLGVAVEGDLRREVALNIKRLVEINCFRGTRHRKGLPVRGQRTKTNARTRKGPKKTIAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|15612723|ref|NP_241026.1| 30S ribosomal protein S13 [Bacillus halodurans C-125]
 gi|6094152|sp|O50632|RS13_BACHD RecName: Full=30S ribosomal protein S13
 gi|2760183|dbj|BAA24192.1| ribosomal protein S13 [Bacillus halodurans]
 gi|4512429|dbj|BAA75296.1| rpsM homologue (identity of 84% to B. subtilis ) [Bacillus
           halodurans]
 gi|10172772|dbj|BAB03879.1| 30S ribosomal protein S13 [Bacillus halodurans C-125]
          Length = 121

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+G+G  ++Q+I  K  +    RV  L E E+ +IR A+
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGVGRSTAQEILAKANVSENTRVRDLTEEELGRIRSAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ ++VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  N+RTRK   +    +
Sbjct: 61  EE-FKVEGDLRREVSLNIKRLIEIGAYRGIRHRRGLPVRGQNTKNNSRTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|329938207|ref|ZP_08287658.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045]
 gi|329302696|gb|EGG46586.1| 30S ribosomal protein S13 [Streptomyces griseoaurantiacus M045]
          Length = 126

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|239929489|ref|ZP_04686442.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
 gi|291437814|ref|ZP_06577204.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
 gi|291340709|gb|EFE67665.1| 30S ribosomal protein S13 [Streptomyces ghanaensis ATCC 14672]
          Length = 126

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       + P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGVDPNTRVRDLSEEQLVAIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226939209|ref|YP_002794280.1| RpsM [Laribacter hongkongensis HLHK9]
 gi|254811151|sp|C1DAU0|RS13_LARHH RecName: Full=30S ribosomal protein S13
 gi|226714133|gb|ACO73271.1| RpsM [Laribacter hongkongensis HLHK9]
          Length = 120

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  + +   L  I+GIG   ++ IC+   I    +V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNIPNHQHIWVGLQAIYGIGATRAKVICSAAGIEISTKVKDLTDAEMEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EGDLRR V MNIKRLMDLGCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-FTIEGDLRREVTMNIKRLMDLGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKPIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|73661996|ref|YP_300777.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82581616|sp|Q49ZE4|RS13_STAS1 RecName: Full=30S ribosomal protein S13
 gi|72494511|dbj|BAE17832.1| 30S ribosomal protein S13 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 121

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  + PE RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTTTANKIAEEANVSPETRVKDLTDDELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  D-NYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|296454846|ref|YP_003661990.1| 30S ribosomal protein S13 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184278|gb|ADH01160.1| ribosomal protein S13 [Bifidobacterium longum subsp. longum JDM301]
          Length = 125

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR+  AL YI G+G   +++      I P+ RV  L + ++I +R  +
Sbjct: 1   MARLAGVDIPNEKRIEIALTYIFGVGRTRTKETLAATGISPDIRVKDLTDEQLITLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|332107890|gb|EGJ09114.1| 30S ribosomal protein S13 [Rubrivivax benzoatilyticus JA2]
          Length = 121

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  ++Q IC+ + IP  ++V  L +SE+ +IR+ I
Sbjct: 1   MARIAGINIPPHKHAEIGLTSIYGIGRTTAQKICDSVGIPYSKKVKDLNDSELEKIREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK   KG  A 
Sbjct: 61  GR-LTIEGDLRRELSINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|239905881|ref|YP_002952620.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1]
 gi|259494674|sp|C4XLK0|RS13_DESMR RecName: Full=30S ribosomal protein S13
 gi|239795745|dbj|BAH74734.1| 30S ribosomal protein S13 [Desulfovibrio magneticus RS-1]
          Length = 123

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI GIG  ++  I     +   +    L   E   IR+ +
Sbjct: 1   MARIAGVDLPKNKRMDIALTYIFGIGRTTALRILESTGVDWTKNSDALTSEETNNIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR +   IKRLMD+GCYRGLRHRRGLP RGQRTHTN+RTRK   +G +A+
Sbjct: 61  EANYKVEGDLRREITAGIKRLMDIGCYRGLRHRRGLPCRGQRTHTNSRTRKGPRRGVMAK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302558969|ref|ZP_07311311.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000]
 gi|302476587|gb|EFL39680.1| 30S ribosomal protein S13 [Streptomyces griseoflavus Tu4000]
          Length = 126

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   SQ       I P  RV  L E +++ IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLSQQTLAATGIDPNTRVRDLSEEQLVAIREFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGTYQGLRHRRGLPVRGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|220935470|ref|YP_002514369.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254811174|sp|B8GV36|RS13_THISH RecName: Full=30S ribosomal protein S13
 gi|219996780|gb|ACL73382.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 118

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 70/117 (59%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP  K  V AL  I+GIG   +Q IC    + P+ ++  L E EV ++R A+
Sbjct: 1   MARVAGVNIPDNKHTVIALTAIYGIGRTRAQKICEATGVKPDMKIRDLTEEEVEKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Q + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   +  
Sbjct: 61  GQ-FPVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRRPI 116


>gi|297159622|gb|ADI09334.1| 30S ribosomal protein S13 [Streptomyces bingchenggensis BCW-1]
          Length = 126

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPRDKRVEVALTYVFGIGRTLAQQTLATTGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|240167780|ref|ZP_04746439.1| 30S ribosomal protein S13 [Mycobacterium kansasii ATCC 12478]
          Length = 124

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIYGIGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + ++EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296168682|ref|ZP_06850431.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896591|gb|EFG76232.1| 30S ribosomal protein S13 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 124

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S +I     I  + R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILAATGIDKDLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|226942800|ref|YP_002797873.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ]
 gi|259494667|sp|C1DKN5|RS13_AZOVD RecName: Full=30S ribosomal protein S13
 gi|226717727|gb|ACO76898.1| 30S ribosomal protein S13 [Azotobacter vinelandii DJ]
          Length = 118

 Score =  173 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQAICAATGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-LTTEGDLRREVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|90020628|ref|YP_526455.1| 30S ribosomal protein S13 [Saccharophagus degradans 2-40]
 gi|122996430|sp|Q21M36|RS13_SACD2 RecName: Full=30S ribosomal protein S13
 gi|89950228|gb|ABD80243.1| SSU ribosomal protein S13P [Saccharophagus degradans 2-40]
          Length = 118

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG   ++ IC+   +    ++  L E +V  IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVYGIGRTKAKQICSAAGVAESTKIGDLSEEQVDTIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRNLPVRGQRSKTNARTRKGPRKPI 116


>gi|157690925|ref|YP_001485387.1| 30S ribosomal protein S13 [Bacillus pumilus SAFR-032]
 gi|194017484|ref|ZP_03056095.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061]
 gi|166991599|sp|A8F9B0|RS13_BACP2 RecName: Full=30S ribosomal protein S13
 gi|157679683|gb|ABV60827.1| ribosomal protein S13 [Bacillus pumilus SAFR-032]
 gi|194010756|gb|EDW20327.1| ribosomal protein S13p/S18e [Bacillus pumilus ATCC 7061]
          Length = 121

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|313891541|ref|ZP_07825151.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E]
 gi|329121853|ref|ZP_08250468.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965]
 gi|313120000|gb|EFR43182.1| 30S ribosomal protein S13 [Dialister microaerophilus UPII 345-E]
 gi|327467791|gb|EGF13283.1| 30S ribosomal protein S13 [Dialister micraerophilus DSM 19965]
          Length = 125

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 85/121 (70%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S+ I  +  + P+ RV  L E +V +IR A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTLSKKILAETGVSPDTRVRDLNEDDVAKIRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR  ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK   K   A+
Sbjct: 61  GE-YKVEGDLRREESLNIKRLVEIGSYRGRRHRLGLPTRGQRTKTNARTRKGPRKTIAAK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|56961957|ref|YP_173679.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16]
 gi|81367460|sp|Q5WLN7|RS13_BACSK RecName: Full=30S ribosomal protein S13
 gi|56908191|dbj|BAD62718.1| 30S ribosomal protein S13 [Bacillus clausii KSM-K16]
          Length = 121

 Score =  173 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L Y+ GIG  ++  I     +    RV  L E E+ +IR+A+
Sbjct: 1   MARVAGVDIPRDKRVVISLTYVFGIGKSTAAKILETAGVDENTRVRDLTEEELGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  YQVEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  E-GYQVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPKRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|317126887|ref|YP_004093169.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522]
 gi|315471835|gb|ADU28438.1| 30S ribosomal protein S13 [Bacillus cellulosilyticus DSM 2522]
          Length = 121

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 92/122 (75%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  S++ I ++  +  E RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVYGIGTSSAKAILSEAGVSEETRVRDLTEDELGKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  NARTRK   +    +
Sbjct: 61  DK-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116671488|ref|YP_832421.1| 30S ribosomal protein S13 [Arthrobacter sp. FB24]
 gi|158706333|sp|A0JZ51|RS13_ARTS2 RecName: Full=30S ribosomal protein S13
 gi|116611597|gb|ABK04321.1| SSU ribosomal protein S13P [Arthrobacter sp. FB24]
          Length = 125

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L +++++++R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153952886|ref|YP_001393651.1| RpsM [Clostridium kluyveri DSM 555]
 gi|219853551|ref|YP_002470673.1| hypothetical protein CKR_0208 [Clostridium kluyveri NBRC 12016]
 gi|189040497|sp|A5N4S2|RS13_CLOK5 RecName: Full=30S ribosomal protein S13
 gi|254811142|sp|B9DYD4|RS13_CLOK1 RecName: Full=30S ribosomal protein S13
 gi|146345767|gb|EDK32303.1| RpsM [Clostridium kluyveri DSM 555]
 gi|219567275|dbj|BAH05259.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 123

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KRV   L YI+GIG  +SQ I  +  +  + RV  L E EV  +R  I
Sbjct: 1   MARIAGIDLPKEKRVEIGLTYIYGIGLPTSQKILKETGVNSDTRVKDLTEEEVNLLRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ ++EGDLRR VA+NIKRL+++G YRG+RHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  -KNLKIEGDLRREVALNIKRLIEIGSYRGIRHRKGLPVRGQKTKTNARTRKGPKKLVGAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|255020789|ref|ZP_05292847.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC
           51756]
 gi|254969785|gb|EET27289.1| SSU ribosomal protein S13p (S18e) [Acidithiobacillus caldus ATCC
           51756]
          Length = 118

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 69/118 (58%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K++  AL YI+GIG   S+ I     +P + RV  + E+E+ +IR  +
Sbjct: 1   MARIAGVNIPNNKQIETALTYIYGIGPSRSKQILAAAEVPFDIRVKDISEAELERIRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK   K   
Sbjct: 61  GK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKAIT 117


>gi|326799152|ref|YP_004316971.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21]
 gi|326549916|gb|ADZ78301.1| 30S ribosomal protein S13 [Sphingobacterium sp. 21]
          Length = 125

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR V  L YI+GIG  +++ I  +  I  + +V +  + ++  IR  I
Sbjct: 1   MARIAGIDLPRNKRGVIGLTYIYGIGPSTAKSILAEAGIDEDTKVQEWTDDQLTAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  NDRVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|78357277|ref|YP_388726.1| 30S ribosomal protein S13 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|91207701|sp|Q30Z65|RS13_DESDG RecName: Full=30S ribosomal protein S13
 gi|78219682|gb|ABB39031.1| SSU ribosomal protein S13P [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 122

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL YI+G+G  ++ +I +   +   R +  L   EV +IR+ I
Sbjct: 1   MARIAGVDLPRGKRVDIALTYIYGVGRATALEILDTTGVDWTRNIDDLSADEVNEIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ+++VEGDLRR ++ NIKRLMD+GC+RGLRHRRGLP RGQRT TNARTRK   +G   +
Sbjct: 61  EQNHKVEGDLRREISSNIKRLMDIGCHRGLRHRRGLPARGQRTKTNARTRKGPRRGVAGK 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|254819218|ref|ZP_05224219.1| 30S ribosomal protein S13 [Mycobacterium intracellulare ATCC 13950]
          Length = 124

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   S +I     I    R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIFGVGRTRSNEILEATGIDKNLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|77461279|ref|YP_350786.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1]
 gi|91207719|sp|Q3K609|RS13_PSEPF RecName: Full=30S ribosomal protein S13
 gi|77385282|gb|ABA76795.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf0-1]
 gi|310941781|dbj|BAJ24244.1| 30S ribosomal protein S13 [Pseudomonas chlororaphis subsp.
           chlororaphis]
          Length = 118

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC +  + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAETGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|269958605|ref|YP_003328392.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel]
 gi|269848434|gb|ACZ49078.1| 30S ribosomal protein S13 [Anaplasma centrale str. Israel]
          Length = 123

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I  +  V  L + +V++IR  I
Sbjct: 1   MARIGGVNVPVNKRVVVALTYIYGIGPSLASKICKGCGISEDALVSSLGDEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RSGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGTRLAVAV 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|94987421|ref|YP_595354.1| 30S ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00]
 gi|158706242|sp|Q1MPP4|RS13_LAWIP RecName: Full=30S ribosomal protein S13
 gi|94731670|emb|CAJ55033.1| ribosomal protein S13 [Lawsonia intracellularis PHE/MN1-00]
          Length = 122

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 91/122 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR   AL YI+G+G  ++  + + + I   R +  L   E+ ++R+ +
Sbjct: 1   MARIAGIDLPRGKRSDIALSYIYGVGRVTALKVLDAVGINWSRSIDDLSAEELNEVRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEG+LRR V+ NIKRLMD+GCYRGLRHR+GLPV GQRTHTNARTRK   KG V +
Sbjct: 61  EKNYKVEGELRREVSANIKRLMDIGCYRGLRHRKGLPVHGQRTHTNARTRKGPRKGAVGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|239825718|ref|YP_002948342.1| 30S ribosomal protein S13 [Geobacillus sp. WCH70]
 gi|259494681|sp|C5D3U2|RS13_GEOSW RecName: Full=30S ribosomal protein S13
 gi|239806011|gb|ACS23076.1| ribosomal protein S13 [Geobacillus sp. WCH70]
          Length = 121

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKSTAKKILAEAGVSEDTRVRDLTEEELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR V++NIKRL+++GCYRG+RHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 61  GR-LKVEGDLRREVSLNIKRLIEIGCYRGIRHRRGLPVRGQNTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15644224|ref|NP_229275.1| 30S ribosomal protein S13 [Thermotoga maritima MSB8]
 gi|148270447|ref|YP_001244907.1| 30S ribosomal protein S13 [Thermotoga petrophila RKU-1]
 gi|170289158|ref|YP_001739396.1| ribosomal protein S13 [Thermotoga sp. RQ2]
 gi|281412754|ref|YP_003346833.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
 gi|6831659|sp|Q9X1I5|RS13_THEMA RecName: Full=30S ribosomal protein S13
 gi|166231929|sp|A5IMA8|RS13_THEP1 RecName: Full=30S ribosomal protein S13
 gi|226712798|sp|B1LBL5|RS13_THESQ RecName: Full=30S ribosomal protein S13
 gi|4982041|gb|AAD36543.1|AE001798_8 ribosomal protein S13 [Thermotoga maritima MSB8]
 gi|147735991|gb|ABQ47331.1| SSU ribosomal protein S13P [Thermotoga petrophila RKU-1]
 gi|170176661|gb|ACB09713.1| ribosomal protein S13 [Thermotoga sp. RQ2]
 gi|281373857|gb|ADA67419.1| 30S ribosomal protein S13 [Thermotoga naphthophila RKU-10]
          Length = 125

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+V  AL YI+GIG   S +I     I PE+RV  L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKVWVALTYIYGIGRSRSFEILKNTGIDPEKRVGDLTDEEISKITKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  ++VEG+LR  V  NI+RL+++GCYRG+RH+ GLPVRGQ+T +NARTRK      +  
Sbjct: 61  QDHFKVEGELRSEVERNIRRLIEIGCYRGIRHKLGLPVRGQKTRSNARTRKGPRPSRIKT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|302543336|ref|ZP_07295678.1| 30S ribosomal protein S13 [Streptomyces hygroscopicus ATCC 53653]
 gi|302460954|gb|EFL24047.1| 30S ribosomal protein S13 [Streptomyces himastatinicus ATCC 53653]
          Length = 126

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|308190156|ref|YP_003923087.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER]
 gi|319777460|ref|YP_004137111.1| 30S ribosomal protein s13 [Mycoplasma fermentans M64]
 gi|238810273|dbj|BAH70063.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624898|gb|ADN69203.1| 30S ribosomal protein S13 [Mycoplasma fermentans JER]
 gi|318038535|gb|ADV34734.1| 30S ribosomal protein S13 [Mycoplasma fermentans M64]
          Length = 123

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG   +Q+IC K  I    RV  L E ++  IR+ +
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGRTRAQEICAKAKIDENLRVKDLSEEQLSAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y  EGDLRR  ++NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKEYTTEGDLRRETSLNIKRLMEIKCYRGIRHRKGLPVRGQCTQKNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|220913402|ref|YP_002488711.1| 30S ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|325964134|ref|YP_004242040.1| 30S ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
 gi|254811125|sp|B8HCX6|RS13_ARTCA RecName: Full=30S ribosomal protein S13
 gi|219860280|gb|ACL40622.1| ribosomal protein S13 [Arthrobacter chlorophenolicus A6]
 gi|323470221|gb|ADX73906.1| SSU ribosomal protein S13P [Arthrobacter phenanthrenivorans Sphe3]
          Length = 124

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KR+  AL YI+G+G   + +      I  + RV  L +++++++R  I
Sbjct: 1   MARLAGVDIPREKRLEIALTYIYGVGKTRAHETLAATGISADVRVKDLTDAQLVELRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y GLRHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKVEGDLRREVAADIRRKVEIGSYEGLRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218779739|ref|YP_002431057.1| 30S ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01]
 gi|226712729|sp|B8FER2|RS13_DESAA RecName: Full=30S ribosomal protein S13
 gi|218761123|gb|ACL03589.1| ribosomal protein S13 [Desulfatibacillum alkenivorans AK-01]
          Length = 127

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 67/115 (58%), Positives = 83/115 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI GIG  +S  I  +L I P+ +   L E +V  IR+ I
Sbjct: 1   MARIAGVDLPKRKRIEIGLTYIFGIGRSTSSKILEELGIDPDTKTDDLTEGQVNDIRKLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +  Y+VEG+LR  ++MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK   +
Sbjct: 61  DSKYRVEGELRTQISMNIKRLMDLGCYRGLRHRRGLPVHGQRTSTNARTRKGPRR 115


>gi|325280944|ref|YP_004253486.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712]
 gi|324312753|gb|ADY33306.1| 30S ribosomal protein S13 [Odoribacter splanchnicus DSM 20712]
          Length = 125

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 59/112 (52%), Positives = 79/112 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR   AL YI+GIG  S++ I ++  I  + +V    + ++  +R+ I
Sbjct: 1   MARIVGVDLPSNKRGEIALTYIYGIGRSSARAILSEAGIDYDLKVKDWNDDQLGAVRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             +Y+VEG+LR +V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  GTEYKVEGELRSSVQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKG 112


>gi|300812373|ref|ZP_07092808.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496678|gb|EFK31765.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 116

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115


>gi|327438301|dbj|BAK14666.1| ribosomal protein S13 [Solibacillus silvestris StLB046]
          Length = 121

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +SQ +     I    RV  L E ++ QIR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKTTSQKVLAGAGIDENTRVKDLTEDQLNQIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+ EGDLRR V++NIKRLM++   RG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DS-YKTEGDLRREVSLNIKRLMEIASNRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|322812562|pdb|3PYN|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812615|pdb|3PYQ|M Chain M, Crystal Structure Of A Complex Containing Domain 3 From
           The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome.
 gi|322812668|pdb|3PYS|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The First 70s Ribosome.
 gi|322812721|pdb|3PYU|M Chain M, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
           Igr Ires Rna Bound To The 70s Ribosome. This File
           Contains The 30s Subunit Of The Second 70s Ribosome
          Length = 116

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 70/116 (60%), Positives = 85/116 (73%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV IPR KRV  AL YI+GIG   +++   K  I P  RV  L E+EV+++R+ +E
Sbjct: 1   ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVE 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +++EG+LR  VA NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  NTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTV 116


>gi|308178108|ref|YP_003917514.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117]
 gi|307745571|emb|CBT76543.1| 30S ribosomal protein S13 [Arthrobacter arilaitensis Re117]
          Length = 124

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV+ AL YI+G+G   +++      I P+ RV  L + +++Q+R  +
Sbjct: 1   MARLAGVDIPREKRVIIALTYIYGVGKTRAEETIAATGISPDIRVKDLTDEQLVQLRDFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR V  +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGTYKVEGDLRREVQADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257095018|ref|YP_003168659.1| 30S ribosomal protein S13 [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047542|gb|ACV36730.1| ribosomal protein S13 [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 120

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +    AL  I+GIG   +Q IC+   +    ++  L E+E+ ++R  I
Sbjct: 1   MARIAGVNLPNHQHAEIALTAIYGIGRPRAQKICDAAGVTRSTKMKDLTEAELERLRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR V MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   K    +
Sbjct: 61  GK-LSVEGDLRREVTMNIKRLMDLGCYRGLRHRKGLPSRGQRTRTNARTRKGPRKPIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|23097598|ref|NP_691064.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831]
 gi|32363325|sp|Q8ETW0|RS13_OCEIH RecName: Full=30S ribosomal protein S13
 gi|22775821|dbj|BAC12099.1| 30S ribosomal protein S13 [Oceanobacillus iheyensis HTE831]
          Length = 121

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+G+G  ++Q I  +  +  + RV  L E E+ +IRQA+
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGVGKTTAQQILKEAGVSEDTRVRDLTEDELGRIRQAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y  EGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  N+RTRK   K    +
Sbjct: 61  DQ-YNTEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNSRTRKGPRKTMANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|254391368|ref|ZP_05006571.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|294814492|ref|ZP_06773135.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|326442881|ref|ZP_08217615.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|197705058|gb|EDY50870.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
 gi|294327091|gb|EFG08734.1| 30S ribosomal protein S13 [Streptomyces clavuligerus ATCC 27064]
          Length = 126

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   +Q+      + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTLAQETLAATGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|145596409|ref|YP_001160706.1| 30S ribosomal protein S13 [Salinispora tropica CNB-440]
 gi|189044293|sp|A4XBM1|RS13_SALTO RecName: Full=30S ribosomal protein S13
 gi|145305746|gb|ABP56328.1| SSU ribosomal protein S13P [Salinispora tropica CNB-440]
          Length = 126

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK   +    +
Sbjct: 61  ETNYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|158520747|ref|YP_001528617.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3]
 gi|226712731|sp|A8ZV79|RS13_DESOH RecName: Full=30S ribosomal protein S13
 gi|158509573|gb|ABW66540.1| ribosomal protein S13 [Desulfococcus oleovorans Hxd3]
          Length = 127

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/116 (58%), Positives = 87/116 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I NKL+I  + +V QL E+E+  IR A+
Sbjct: 1   MARIAGVDLPKRKRVEIGLTYIYGIGRSTSRQILNKLSIDYDTKVDQLTETEINAIRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +++VEG+LR  V+MNIKRLMDLGCYRGLRHR+ LP  GQRT TNARTRK   + 
Sbjct: 61  TNEHKVEGELRTEVSMNIKRLMDLGCYRGLRHRKSLPCHGQRTSTNARTRKGPKRT 116


>gi|242278681|ref|YP_002990810.1| 30S ribosomal protein S13 [Desulfovibrio salexigens DSM 2638]
 gi|259494672|sp|C6C1A8|RS13_DESAD RecName: Full=30S ribosomal protein S13
 gi|242121575|gb|ACS79271.1| ribosomal protein S13 [Desulfovibrio salexigens DSM 2638]
          Length = 123

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+G+G  ++  I + + I    +   L   +V  IR+ +
Sbjct: 1   MARIAGVDLPKNKRLDIALTYIYGVGRTTALKILDTVGIDWTLKTDDLSGEQVNTIRKEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR    +IKRLMD+GCYRGLRHRRGLPVRGQ + TNARTRK   +  ++R
Sbjct: 61  EDNYKVEGDLRRDQIADIKRLMDIGCYRGLRHRRGLPVRGQSSKTNARTRKGPRRSVMSR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|284040597|ref|YP_003390527.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
 gi|283819890|gb|ADB41728.1| 30S ribosomal protein S13 [Spirosoma linguale DSM 74]
          Length = 125

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR   AL YI GIG   ++ I     I  +++  +  + E   +R AI
Sbjct: 1   MARIAGVDIPDKKRGEIALTYIFGIGRSRAKKILTDAGISVDKKASEWSDEEASAVRNAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y+VEG LR  V ++IKRLMD+GCYRGLRHR+GLPVRGQ T  N+RTRK   K    +
Sbjct: 61  SNEYKVEGQLRSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQHTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|83748172|ref|ZP_00945199.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551]
 gi|207721874|ref|YP_002252312.1| 30S ribosomal protein S13 [Ralstonia solanacearum MolK2]
 gi|207744553|ref|YP_002260945.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609]
 gi|300702803|ref|YP_003744404.1| 30S ribosomal protein S13 [Ralstonia solanacearum CFBP2957]
 gi|83725140|gb|EAP72291.1| SSU ribosomal protein S13P [Ralstonia solanacearum UW551]
 gi|206587042|emb|CAQ17626.1| 30s ribosomal protein s13 [Ralstonia solanacearum MolK2]
 gi|206595959|emb|CAQ62886.1| 30s ribosomal protein s13 [Ralstonia solanacearum IPO1609]
 gi|299070465|emb|CBJ41760.1| 30S ribosomal subunit protein S13 [Ralstonia solanacearum CFBP2957]
          Length = 121

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  ++GIG   ++ IC    +P  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAVYGIGRSRARKICEVTGVPTNKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   K GVA 
Sbjct: 61  NK-FTVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|222150469|ref|YP_002559622.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402]
 gi|254811153|sp|B9E9L5|RS13_MACCJ RecName: Full=30S ribosomal protein S13
 gi|222119591|dbj|BAH16926.1| 30S ribosomal protein S13 [Macrococcus caseolyticus JCSC5402]
          Length = 121

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  S+Q I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRVVIALTYIYGIGRTSAQKILAEANVSEDTRVRDLTEDELGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR V +NIKRLM++  YRG+RHRRGLP RGQ T  NARTRK   K    +
Sbjct: 61  D-GYKVEGDLRREVNLNIKRLMEIASYRGIRHRRGLPTRGQNTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|312866513|ref|ZP_07726730.1| 30S ribosomal protein S13 [Streptococcus downei F0415]
 gi|311097944|gb|EFQ56171.1| 30S ribosomal protein S13 [Streptococcus downei F0415]
          Length = 121

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  K VV +L YI+GIG  +SQ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKHVVISLTYIYGIGLATSQKILAAAGVAEDIRVKDLTTDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  D-NIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|209884835|ref|YP_002288692.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5]
 gi|209873031|gb|ACI92827.1| ribosomal protein S13p/S18e [Oligotropha carboxidovorans OM5]
          Length = 125

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 84/121 (69%), Positives = 96/121 (79%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRV+ AL YIHGIG K++ DI  K+ IP +RRV QL + EV+QIR+ I+
Sbjct: 5   ARIAGVNIPTNKRVIIALQYIHGIGQKNAADIVEKVKIPLDRRVSQLTDQEVLQIREIID 64

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR   MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K
Sbjct: 65  RDYLVEGDLRRETGMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKK 124

Query: 122 R 122
           +
Sbjct: 125 K 125


>gi|126736628|ref|ZP_01752368.1| ribosomal protein S13 [Roseobacter sp. CCS2]
 gi|126713941|gb|EBA10812.1| ribosomal protein S13 [Roseobacter sp. CCS2]
          Length = 133

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 76/121 (62%), Positives = 89/121 (73%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP AKRV  AL YI GIG   +++IC  + I   RRV+QL ++EV+ IR+ I+
Sbjct: 13  ARIAGVNIPTAKRVPIALTYITGIGNAKAEEICEAVKIDRARRVNQLSDAEVLSIREYID 72

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +  VEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K    +K
Sbjct: 73  ANLMVEGDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTSTNARTRKGPAKAIAGKK 132

Query: 122 R 122
           +
Sbjct: 133 K 133


>gi|289550167|ref|YP_003471071.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659203|ref|ZP_07912067.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590]
 gi|289179699|gb|ADC86944.1| SSU ribosomal protein S13p (S18e) [Staphylococcus lugdunensis
           HKU09-01]
 gi|315495628|gb|EFU83959.1| 30S ribosomal protein S13 [Staphylococcus lugdunensis M23590]
          Length = 121

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++Q I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGTSTAQKIVEQANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  ++VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  DS-FKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|118616622|ref|YP_904954.1| 30S ribosomal protein S13 [Mycobacterium ulcerans Agy99]
 gi|183981107|ref|YP_001849398.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
 gi|158706253|sp|A0PMB4|RS13_MYCUA RecName: Full=30S ribosomal protein S13
 gi|226712767|sp|B2HCX1|RS13_MYCMM RecName: Full=30S ribosomal protein S13
 gi|118568732|gb|ABL03483.1| 30S ribosomal protein S13, RpsM [Mycobacterium ulcerans Agy99]
 gi|183174433|gb|ACC39543.1| 30S ribosomal protein S13, RpsM [Mycobacterium marinum M]
          Length = 124

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   S +I     I    R   L + ++  +R  I
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGVGRTRSNEILAATGIDRNLRTRDLTDDQLTHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + ++EGDLRR V  +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKIEGDLRREVQADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|88607193|ref|YP_504913.1| 30S ribosomal protein S13 [Anaplasma phagocytophilum HZ]
 gi|123495600|sp|Q2GL38|RS13_ANAPZ RecName: Full=30S ribosomal protein S13
 gi|88598256|gb|ABD43726.1| ribosomal protein S13 [Anaplasma phagocytophilum HZ]
          Length = 123

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 72/122 (59%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVN+P  KRVV AL YI+GIG   +  IC    I    RV  L E +V++IR  I
Sbjct: 1   MARIGGVNVPVDKRVVVALTYIYGIGTSLANRICEGCGIDKNVRVSALSEEDVVKIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                VE DLR+ VAMNIK LMD+GCYRGLRHR+ LPVRGQRTHTNARTRK   +  VA 
Sbjct: 61  RAGCVVEADLRKEVAMNIKFLMDIGCYRGLRHRKKLPVRGQRTHTNARTRKGGSRLAVAA 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|159039808|ref|YP_001539061.1| 30S ribosomal protein S13 [Salinispora arenicola CNS-205]
 gi|189044292|sp|A8M503|RS13_SALAI RecName: Full=30S ribosomal protein S13
 gi|157918643|gb|ABW00071.1| ribosomal protein S13 [Salinispora arenicola CNS-205]
          Length = 126

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      I P++R   L + E++Q+R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRALETLAATGISPDKRARDLTDEELVQLRNHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY G+RHRRGLPVRGQRT TNAR+RK   +    +
Sbjct: 61  EANYKVEGDLRREVAADIRRKVEIGCYAGIRHRRGLPVRGQRTRTNARSRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|221307954|ref|ZP_03589801.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312275|ref|ZP_03594080.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317209|ref|ZP_03598503.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321472|ref|ZP_03602766.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767034|ref|NP_388022.2| 30S ribosomal protein S13 [Bacillus subtilis subsp. subtilis str.
           168]
 gi|321313813|ref|YP_004206100.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5]
 gi|1173195|sp|P20282|RS13_BACSU RecName: Full=30S ribosomal protein S13; AltName: Full=BS14
 gi|1044989|gb|AAB06824.1| ribosomal protein S13 [Bacillus subtilis]
 gi|225184661|emb|CAB11917.2| ribosomal protein S13 [Bacillus subtilis subsp. subtilis str. 168]
 gi|291482513|dbj|BAI83588.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. natto BEST195]
 gi|320020087|gb|ADV95073.1| 30S ribosomal protein S13 [Bacillus subtilis BSn5]
          Length = 121

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|328955888|ref|YP_004373221.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2]
 gi|328456212|gb|AEB07406.1| SSU ribosomal protein S13P [Coriobacterium glomerans PW2]
          Length = 124

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG  ++  IC    I P+ RV  L E EV  IR  I
Sbjct: 1   MARINGVDLPREKRVEIGLTYIYGIGRTTATKICVTCNINPDTRVRDLTEDEVNAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +++   VEGDLRR    N+KRLMD+G YRGLRHRRGLPVRGQRTHTNARTRK   +   A
Sbjct: 61  DKNRIMVEGDLRRDQNQNVKRLMDIGAYRGLRHRRGLPVRGQRTHTNARTRKGPKRQIGA 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|258646027|ref|ZP_05733496.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
 gi|260403399|gb|EEW96946.1| 30S ribosomal protein S13 [Dialister invisus DSM 15470]
          Length = 125

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   S++I NK  I P+ RV  L E +V  IR A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIFGIGLTLSREILNKAGISPDVRVRDLTEDDVANIRNAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             DY+VEGDLRR  ++NIKRL+++G YRG RHR GLP RGQRT TNARTRK   K    +
Sbjct: 61  -ADYKVEGDLRREESLNIKRLVEIGSYRGRRHRDGLPTRGQRTKTNARTRKGPRKTIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|206889222|ref|YP_002249223.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226712799|sp|B5YG25|RS13_THEYD RecName: Full=30S ribosomal protein S13
 gi|206741160|gb|ACI20217.1| ribosomal protein S13p/S18e [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 121

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ +RV   L  I GIG   S  I  +  + P +RV  L + E+++IR  I
Sbjct: 1   MARIAGVDIPKNERVEIGLTRIFGIGRSLSNKILKETGVEPNKRVKDLTDDEIVKIRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++Y+VEG+LR+ ++MNIKRLMD+GCYRGLRH   LPVRGQRT TN+RTRK   +  + +
Sbjct: 61  EKNYKVEGELRKEISMNIKRLMDIGCYRGLRHMANLPVRGQRTRTNSRTRKGPRRKIMKK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|57504896|ref|ZP_00370871.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228]
 gi|305432397|ref|ZP_07401559.1| 30S ribosomal protein S13 [Campylobacter coli JV20]
 gi|57019324|gb|EAL56026.1| ribosomal protein S13p/S18e [Campylobacter coli RM2228]
 gi|304444436|gb|EFM37087.1| 30S ribosomal protein S13 [Campylobacter coli JV20]
          Length = 121

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|225873053|ref|YP_002754512.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196]
 gi|254811119|sp|C1F617|RS13_ACIC5 RecName: Full=30S ribosomal protein S13
 gi|225793801|gb|ACO33891.1| ribosomal protein S13 [Acidobacterium capsulatum ATCC 51196]
          Length = 127

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR K+   AL YI+GIG   +  I     + P R++  L E EV +IRQ I
Sbjct: 1   MARVAGVDLPRNKQARIALTYIYGIGNPRALRILTAANVDPFRKIQDLSEDEVNRIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + QVEGDLR+ VAM+IKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  EAEGQVEGDLRKDVAMHIKRLIEIQSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325684743|gb|EGD26897.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 116

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAQEICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115


>gi|261378063|ref|ZP_05982636.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685]
 gi|269145513|gb|EEZ71931.1| 30S ribosomal protein S13 [Neisseria cinerea ATCC 14685]
          Length = 120

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|295093658|emb|CBK82749.1| 30S ribosomal protein S13 [Coprococcus sp. ART55/1]
          Length = 122

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG  SSQ I  +  + P+ R   L + EV ++ + I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGLPSSQRILKEANVNPDTRCADLTDDEVRRLSEVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +    VEGDLRR +  NIKRL ++ CYRG RHR+GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  KATQVVEGDLRREIGFNIKRLQEIACYRGKRHRQGLPVRGQKTKTNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218961409|ref|YP_001741184.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730066|emb|CAO80978.1| 30S ribosomal subunit protein S13 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 122

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA IAG+ +P+ KR+   L YI+GIG  S+++IC K  I   ++V  L   E   +R  I
Sbjct: 1   MAHIAGIELPKNKRLFIGLTYIYGIGRSSAREICKKANIDEMKKVADLTMEEEKILRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y VEG LR  VAMNIKRLM++GCYRGLRH+RGLPVRGQRTHTNARTRK      + +
Sbjct: 61  HNEYVVEGALRTQVAMNIKRLMEIGCYRGLRHKRGLPVRGQRTHTNARTRKGPRGSTIKK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|257126745|ref|YP_003164859.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
 gi|260891352|ref|ZP_05902615.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
 gi|257050684|gb|ACV39868.1| ribosomal protein S13 [Leptotrichia buccalis C-1013-b]
 gi|260858735|gb|EEX73235.1| 30S ribosomal protein S13 [Leptotrichia hofstadii F0254]
          Length = 121

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI GIG  +S  I     I  + RV  L E +V ++R A+
Sbjct: 1   MARIAGVDIPRNKRVEVSLTYIFGIGRSTSNKILGATGIDRDTRVKDLTEEQVAKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y++EG+LR+ + +NIKRL+D+  YRGLRHR GLPVRGQ+T TNARTRK   +  +A+
Sbjct: 61  EE-YKIEGELRKEIRLNIKRLLDIKSYRGLRHRNGLPVRGQKTKTNARTRKGPVRMAIAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|170780764|ref|YP_001709096.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155332|emb|CAQ00435.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 124

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G  SS        I    RV  L + ++I +R  I
Sbjct: 1   MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKNIRVKDLSDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|237653973|ref|YP_002890287.1| 30S ribosomal protein S13 [Thauera sp. MZ1T]
 gi|237625220|gb|ACR01910.1| ribosomal protein S13 [Thauera sp. MZ1T]
          Length = 120

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   I    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGIVRSVKIKDLTESDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K    +
Sbjct: 61  AR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKPIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|92112576|ref|YP_572504.1| 30S ribosomal protein S13 [Chromohalobacter salexigens DSM 3043]
 gi|122420779|sp|Q1R0F3|RS13_CHRSD RecName: Full=30S ribosomal protein S13
 gi|91795666|gb|ABE57805.1| SSU ribosomal protein S13P [Chromohalobacter salexigens DSM 3043]
          Length = 118

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/117 (58%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI GIG   +Q+IC    I P  +V  L   EV  +R  +
Sbjct: 1   MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICAATGIAPTAKVQDLSAEEVDTLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR   +NIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YTVEGDLRRDTTLNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|222823136|ref|YP_002574709.1| 30S ribosomal protein S13 [Campylobacter lari RM2100]
 gi|254811136|sp|B9KEH3|RS13_CAMLR RecName: Full=30S ribosomal protein S13
 gi|222538357|gb|ACM63458.1| 30S ribosomal protein S13 [Campylobacter lari RM2100]
          Length = 121

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K  I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLHTSRKILDKTGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|317125843|ref|YP_004099955.1| 30S ribosomal protein S13P [Intrasporangium calvum DSM 43043]
 gi|315589931|gb|ADU49228.1| SSU ribosomal protein S13P [Intrasporangium calvum DSM 43043]
          Length = 124

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G   S++      + P+ RV  L ++E++ +R  +
Sbjct: 1   MARLVGVDLPRDKRVEVALTYIFGVGRTRSKEALAATGVSPDTRVKDLGDAELVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYRLEGDLRREVQSDIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148273770|ref|YP_001223331.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831700|emb|CAN02669.1| 30S ribosomal protein S13 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 124

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL YI+G+G  SS        I  + RV  L + ++I +R  I
Sbjct: 1   MARLAGVDLPRDKRVEIALTYIYGVGRTSSVKTLEDTGIDKDIRVKDLSDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++VEGDLRR VA +I+R +++G Y G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170723884|ref|YP_001751572.1| 30S ribosomal protein S13 [Pseudomonas putida W619]
 gi|226712779|sp|B1JAJ0|RS13_PSEPW RecName: Full=30S ribosomal protein S13
 gi|169761887|gb|ACA75203.1| ribosomal protein S13 [Pseudomonas putida W619]
 gi|310941010|dbj|BAJ24379.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941040|dbj|BAJ24394.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|307328055|ref|ZP_07607236.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113]
 gi|306886360|gb|EFN17365.1| 30S ribosomal protein S13 [Streptomyces violaceusniger Tu 4113]
          Length = 126

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KRV  AL Y+ GIG   +Q       + P+ RV  L E ++++IR+ +
Sbjct: 1   MARLAGVDLPREKRVEVALTYVFGIGRTLAQQTLANTGVNPDTRVRDLGEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DNNIKTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|224023642|ref|ZP_03642008.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM
           18228]
 gi|224016864|gb|EEF74876.1| hypothetical protein BACCOPRO_00349 [Bacteroides coprophilus DSM
           18228]
          Length = 126

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|269796229|ref|YP_003315684.1| 30S ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
 gi|269098414|gb|ACZ22850.1| SSU ribosomal protein S13P [Sanguibacter keddieii DSM 10542]
          Length = 124

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +Q       I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIFGVGRTRAQQTLAATGISPDVRVKDLGDAELVSLRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++++EGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNFKLEGDLRREVAADIRRKVEIGCYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|253995741|ref|YP_003047805.1| 30S ribosomal protein S13 [Methylotenera mobilis JLW8]
 gi|253982420|gb|ACT47278.1| ribosomal protein S13 [Methylotenera mobilis JLW8]
          Length = 120

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG  ++Q IC    +    ++  L +++V ++R  +
Sbjct: 1   MARIAGVNIPNNKHTEIALTAIYGIGRNTAQKICVAAGVLATAKIKDLNDADVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   K     
Sbjct: 61  AK-YKVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPVKAIKQS 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|310940980|dbj|BAJ24364.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|237806897|ref|YP_002891337.1| 30S ribosomal protein S13 [Tolumonas auensis DSM 9187]
 gi|259494693|sp|C4L7V2|RS13_TOLAT RecName: Full=30S ribosomal protein S13
 gi|237499158|gb|ACQ91751.1| ribosomal protein S13 [Tolumonas auensis DSM 9187]
          Length = 118

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   ++ IC    I  + +V  L E+++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGDTRAKSICAAAGIAEDVKVKDLDEAQIEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|253998038|ref|YP_003050101.1| 30S ribosomal protein S13 [Methylovorus sp. SIP3-4]
 gi|253984717|gb|ACT49574.1| ribosomal protein S13 [Methylovorus sp. SIP3-4]
          Length = 120

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+G+G  +++ IC    +    ++  L ++EV ++R  +
Sbjct: 1   MARIAGVNIPNHKHTEIALTSIYGVGRNTAKQICLAAGVAGTAKIKDLNDAEVEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   K   A 
Sbjct: 61  AK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPVRGQRTKTNARTRKGPIKPIKAS 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|70732862|ref|YP_262629.1| 30S ribosomal protein S13 [Pseudomonas fluorescens Pf-5]
 gi|330812054|ref|YP_004356516.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|91207717|sp|Q4K554|RS13_PSEF5 RecName: Full=30S ribosomal protein S13
 gi|68347161|gb|AAY94767.1| ribosomal protein S13p/S18e [Pseudomonas fluorescens Pf-5]
 gi|327380162|gb|AEA71512.1| 30S ribosomal protein S13 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 118

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVTGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|57238605|ref|YP_179736.1| 30S ribosomal protein S13 [Campylobacter jejuni RM1221]
 gi|86152230|ref|ZP_01070441.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596382|ref|ZP_01099619.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925736|ref|ZP_01809424.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|153951257|ref|YP_001398872.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157415812|ref|YP_001483068.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205355606|ref|ZP_03222376.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563181|ref|YP_002344961.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|283956976|ref|ZP_06374448.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336]
 gi|315125000|ref|YP_004067004.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|32363423|sp|Q9PM83|RS13_CAMJE RecName: Full=30S ribosomal protein S13
 gi|81353183|sp|Q5HSJ9|RS13_CAMJR RecName: Full=30S ribosomal protein S13
 gi|166231908|sp|A7H5U2|RS13_CAMJD RecName: Full=30S ribosomal protein S13
 gi|172047191|sp|A8FNQ4|RS13_CAMJ8 RecName: Full=30S ribosomal protein S13
 gi|57167409|gb|AAW36188.1| ribosomal protein S13/S18 [Campylobacter jejuni RM1221]
 gi|85840719|gb|EAQ57970.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191223|gb|EAQ95195.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360888|emb|CAL35689.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|145845746|gb|EDK22837.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|152938703|gb|ABS43444.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|157386776|gb|ABV53091.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|205346383|gb|EDZ33016.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|283791477|gb|EFC30274.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 1336]
 gi|284926787|gb|ADC29139.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307748449|gb|ADN91719.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni M1]
 gi|315018722|gb|ADT66815.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315059043|gb|ADT73372.1| SSU ribosomal protein S13p/S18 [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315927662|gb|EFV06993.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929463|gb|EFV08660.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 305]
 gi|315931271|gb|EFV10241.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni 327]
          Length = 121

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 91/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|310941931|dbj|BAJ24319.1| 30S ribosomal protein S13 [Pseudomonas putida]
          Length = 118

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAVKIKDLSDEQIEQLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|241763532|ref|ZP_04761584.1| ribosomal protein S13 [Acidovorax delafieldii 2AN]
 gi|241367263|gb|EER61603.1| ribosomal protein S13 [Acidovorax delafieldii 2AN]
          Length = 121

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L +S++ +IR+ I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTRARKICEATGIAYSKKIKDLSDSDLEKIREQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|119899683|ref|YP_934896.1| 30S ribosomal protein S13 [Azoarcus sp. BH72]
 gi|158706334|sp|A1KB04|RS13_AZOSB RecName: Full=30S ribosomal protein S13
 gi|119672096|emb|CAL96010.1| 30S ribosomal protein S13 [Azoarcus sp. BH72]
          Length = 120

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   +    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAAGVVRSAKIKDLTESDMEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K    +
Sbjct: 61  GR-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|298370569|ref|ZP_06981884.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281179|gb|EFI22669.1| 30S ribosomal protein S13 [Neisseria sp. oral taxon 014 str. F0314]
          Length = 120

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVNIP    VV  L  I+GIG   ++ IC    I P  +V  L E+++  +R+ +
Sbjct: 1   MARISGVNIPNNAHVVIGLQAIYGIGTTRAKLICEAAKIAPSIKVKDLDENQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|294669846|ref|ZP_06734905.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308239|gb|EFE49482.1| hypothetical protein NEIELOOT_01739 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 120

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I    +V  L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGSTRAKLICAATGIEGSTKVKDLDENQLEALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q Y+VEGDLRR + M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  LQ-YEVEGDLRREITMSIKRLMDMGCYRGFRHRRGLPCRGQRTKTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|239943602|ref|ZP_04695539.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
 gi|239990055|ref|ZP_04710719.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 11379]
 gi|291447069|ref|ZP_06586459.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
 gi|291350016|gb|EFE76920.1| 30S ribosomal protein S13 [Streptomyces roseosporus NRRL 15998]
          Length = 126

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAATGVNPNTRVRDLAEEDLVKIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR V  NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|310941751|dbj|BAJ24229.1| 30S ribosomal protein S13 [Pseudomonas azotoformans]
 gi|310941961|dbj|BAJ24334.1| 30S ribosomal protein S13 [Pseudomonas fluorescens]
          Length = 118

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAVAGVNPAAKIKDLSDEQIELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|121997627|ref|YP_001002414.1| 30S ribosomal protein S13 [Halorhodospira halophila SL1]
 gi|158706237|sp|A1WVA0|RS13_HALHL RecName: Full=30S ribosomal protein S13
 gi|121589032|gb|ABM61612.1| SSU ribosomal protein S13P [Halorhodospira halophila SL1]
          Length = 119

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K    AL  I+GIG   +  ICN   +P +RRV  L ++EV  +RQ +
Sbjct: 1   MARIAGINIPTHKHAWVALTSIYGIGRTRALSICNAAGVPHDRRVRDLNDAEVEALRQEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y +EGDLRR+VAM+IKRLMDLGCYRG+RHRRGLPVRGQ+T TNARTRK   +G  +R
Sbjct: 61  G-NYVIEGDLRRSVAMDIKRLMDLGCYRGMRHRRGLPVRGQQTQTNARTRKGPRRGPASR 119


>gi|297192678|ref|ZP_06910076.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721667|gb|EDY65575.1| 30S ribosomal protein S13 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 126

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + Q EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLQTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|268680564|ref|YP_003304995.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946]
 gi|268618595|gb|ACZ12960.1| 30S ribosomal protein S13 [Sulfurospirillum deleyianum DSM 6946]
          Length = 122

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KRV   L YI+GIG  SS+ I     I  ++RVH+L E +V  IR+ I
Sbjct: 1   MARIAGVDLPMKKRVEYGLTYIYGIGLTSSRAILTATGISFDKRVHELSEDDVAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  +QVEGDLR+ VAM+IK LMD+G YRGLRHR+GLPVRGQ+T TNARTRK   +   A+
Sbjct: 61  QAGFQVEGDLRKKVAMDIKALMDMGSYRGLRHRKGLPVRGQKTKTNARTRKGKKRTVGAK 120

Query: 121 KR 122
            +
Sbjct: 121 AK 122


>gi|82701922|ref|YP_411488.1| 30S ribosomal protein S13 [Nitrosospira multiformis ATCC 25196]
 gi|91207708|sp|Q2YAX5|RS13_NITMU RecName: Full=30S ribosomal protein S13
 gi|82409987|gb|ABB74096.1| SSU ribosomal protein S13P [Nitrosospira multiformis ATCC 25196]
          Length = 125

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +    AL  I+GIG   +++IC    I    ++  + ++E+ ++R  +
Sbjct: 1   MARIAGVNIPNHQHAEIALTAIYGIGRARAREICEAAGINVSTKMKDVTDAEMDKLRDNV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAV 116


>gi|293364084|ref|ZP_06610820.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2]
 gi|292552574|gb|EFF41348.1| 30S ribosomal protein S13 [Mycoplasma alligatoris A21JP2]
          Length = 122

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/121 (51%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRVV +L YI+GIG   ++ IC +  I    RV  L E ++ +IR+ +
Sbjct: 1   MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKIDENARVKSLSEEQLSKIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKQFTTEGDLRREVTLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|146281192|ref|YP_001171345.1| 30S ribosomal protein S13 [Pseudomonas stutzeri A1501]
 gi|158706265|sp|A4VHQ2|RS13_PSEU5 RecName: Full=30S ribosomal protein S13
 gi|145569397|gb|ABP78503.1| ribosomal protein S13 [Pseudomonas stutzeri A1501]
 gi|310941901|dbj|BAJ24304.1| 30S ribosomal protein S13 [Pseudomonas stutzeri]
 gi|327479345|gb|AEA82655.1| 30S ribosomal protein S13 [Pseudomonas stutzeri DSM 4166]
          Length = 118

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   +Q+IC    + P  ++  L + +V  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTRAQEICAATGVNPAAKIKDLSDEQVELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FIVEGDLRRDVNMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|158317767|ref|YP_001510275.1| 30S ribosomal protein S13 [Frankia sp. EAN1pec]
 gi|226712739|sp|A8LB08|RS13_FRASN RecName: Full=30S ribosomal protein S13
 gi|158113172|gb|ABW15369.1| ribosomal protein S13 [Frankia sp. EAN1pec]
          Length = 126

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S+D      + P+ RV  L + EV ++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATGVNPDTRVRDLTDDEVQKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|154684659|ref|YP_001419820.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens FZB42]
 gi|296333138|ref|ZP_06875592.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672841|ref|YP_003864512.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|308172032|ref|YP_003918737.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7]
 gi|166231898|sp|A7Z0R3|RS13_BACA2 RecName: Full=30S ribosomal protein S13
 gi|154350510|gb|ABS72589.1| RpsM [Bacillus amyloliquefaciens FZB42]
 gi|296149754|gb|EFG90649.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411084|gb|ADM36202.1| 30S ribosomal protein S13 [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|307604896|emb|CBI41267.1| ribosomal protein S13 [Bacillus amyloliquefaciens DSM 7]
 gi|328551842|gb|AEB22334.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens TA208]
 gi|328910099|gb|AEB61695.1| 30S ribosomal protein S13 [Bacillus amyloliquefaciens LL3]
          Length = 121

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|215432431|ref|ZP_03430350.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
 gi|289755593|ref|ZP_06514971.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
 gi|289696180|gb|EFD63609.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis EAS054]
          Length = 124

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E D +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK   +    +
Sbjct: 61  EADLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|146308901|ref|YP_001189366.1| 30S ribosomal protein S13 [Pseudomonas mendocina ymp]
 gi|330505185|ref|YP_004382054.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01]
 gi|166231916|sp|A4XZ68|RS13_PSEMY RecName: Full=30S ribosomal protein S13
 gi|145577102|gb|ABP86634.1| SSU ribosomal protein S13P [Pseudomonas mendocina ymp]
 gi|310941841|dbj|BAJ24274.1| 30S ribosomal protein S13 [Pseudomonas mendocina]
 gi|328919471|gb|AEB60302.1| 30S ribosomal protein S13 [Pseudomonas mendocina NK-01]
          Length = 118

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICAATGVNPAAKIKDLTDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|313888778|ref|ZP_07822439.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845147|gb|EFR32547.1| 30S ribosomal protein S13 [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 120

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   SQ+I     +  + RV  L E+E+ +IR+ I
Sbjct: 1   MARISGVDLPREKRVEIGLTYIYGIGKPRSQEILTAAGVDFDTRVKDLTEAELAKIREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK   K     
Sbjct: 61  DK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKMGLPVRGQKTKTNARTRKGPKKLVSKG 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|295838429|ref|ZP_06825362.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74]
 gi|302519634|ref|ZP_07271976.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78]
 gi|318058103|ref|ZP_07976826.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actG]
 gi|318076044|ref|ZP_07983376.1| 30S ribosomal protein S13 [Streptomyces sp. SA3_actF]
 gi|197695773|gb|EDY42706.1| 30S ribosomal protein S13 [Streptomyces sp. SPB74]
 gi|302428529|gb|EFL00345.1| 30S ribosomal protein S13 [Streptomyces sp. SPB78]
          Length = 126

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL Y+ GIG   S+       + P  RV  L E ++++IR+ +
Sbjct: 1   MARLEGVDLPREKRVEVALTYVFGIGRTLSKQTLAATGVDPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + Q EGDLRR +  +I+R +++GCY+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANIQTEGDLRREIQADIRRKVEIGCYQGLRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|42524355|ref|NP_969735.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100]
 gi|81616519|sp|Q6MJ33|RS13_BDEBA RecName: Full=30S ribosomal protein S13
 gi|39576564|emb|CAE80728.1| 30S ribosomal protein S13 [Bdellovibrio bacteriovorus HD100]
          Length = 124

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI+GIG   +  IC ++ IP E R   L +  + +IR  +
Sbjct: 1   MARILGVDLPRNKRVEIALTYIYGIGRPRAAMICKQVGIPSELRTEGLTDEHIAKIRSIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR +  +IKRLMDL C+RG+RHR+GLPVRGQ T +NARTRK   K    +
Sbjct: 61  EANFKVEGDLRREIGQSIKRLMDLNCFRGIRHRKGLPVRGQNTRSNARTRKGPKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86152866|ref|ZP_01071071.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613746|ref|YP_001001235.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167006128|ref|ZP_02271886.1| 30S ribosomal protein S13 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|158706220|sp|A1W1J4|RS13_CAMJJ RecName: Full=30S ribosomal protein S13
 gi|85843751|gb|EAQ60961.1| ribosomal protein S13p/S18e [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249756|gb|EAQ72715.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 121

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I   +RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYNKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|310941871|dbj|BAJ24289.1| 30S ribosomal protein S13 [Pseudomonas straminea]
          Length = 118

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKICAATGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VNTEGDLRREVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|157737263|ref|YP_001489946.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
 gi|315636980|ref|ZP_07892204.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
 gi|166991598|sp|A8ETK3|RS13_ARCB4 RecName: Full=30S ribosomal protein S13
 gi|157699117|gb|ABV67277.1| 30S ribosomal protein S13 [Arcobacter butzleri RM4018]
 gi|315478810|gb|EFU69519.1| ribosomal protein S13/S18 [Arcobacter butzleri JV22]
          Length = 122

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG  +S+ I N + I   +R  +L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRMEYALTYIYGIGLHNSRLILNAVGIDFNKRAFELTEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK   K   A 
Sbjct: 61  QENYMVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 TK 122


>gi|325299108|ref|YP_004259025.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170]
 gi|324318661|gb|ADY36552.1| 30S ribosomal protein S13 [Bacteroides salanitronis DSM 18170]
          Length = 126

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|307543847|ref|YP_003896326.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581]
 gi|307215871|emb|CBV41141.1| 30S ribosomal protein S13 [Halomonas elongata DSM 2581]
          Length = 118

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/117 (58%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI GIG   +Q+IC    I P  +V +L   EV  +R  +
Sbjct: 1   MARIAGVNIPDNKHAAISLTYIFGIGRTRAQEICVAAGIAPTTKVQELSSEEVDTLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRRGLP+ GQRT TNARTRK   K  
Sbjct: 61  GK-YTVEGDLRRDVTLNIKRLMDLGCYRGLRHRRGLPLNGQRTKTNARTRKGPRKPI 116


>gi|239636209|ref|ZP_04677213.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603]
 gi|239598225|gb|EEQ80718.1| 30S ribosomal protein S13 [Staphylococcus warneri L37603]
 gi|330685162|gb|EGG96826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU121]
          Length = 121

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|256420683|ref|YP_003121336.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588]
 gi|256035591|gb|ACU59135.1| ribosomal protein S13 [Chitinophaga pinensis DSM 2588]
          Length = 126

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI GIG  ++Q I  K  I   ++V    + E   IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQYILEKSGIDFNKKVKDWNDDEQAAIRNVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +++VEG LR  V MNIKRL+D+ CYRGLRHR+GLP+RGQRT TN+RTRK   K    +
Sbjct: 61  NGEFKVEGQLRSEVQMNIKRLLDIACYRGLRHRKGLPLRGQRTRTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|317153935|ref|YP_004121983.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944186|gb|ADU63237.1| 30S ribosomal protein S13 [Desulfovibrio aespoeensis Aspo-2]
          Length = 123

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   +  I + + +  ++    L   EV  IR  I
Sbjct: 1   MARIAGVDLPRNKRMDIALTYIYGIGRTMALQILDTVKVDWQKNSDDLSADEVNVIRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR +  NIKRLMD+G YRGLRHRRGLPVRGQ+T TNARTRK   +  + R
Sbjct: 61  ENNHKVEGDLRRDITSNIKRLMDIGSYRGLRHRRGLPVRGQKTKTNARTRKGPRRSVMGR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|160947675|ref|ZP_02094842.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270]
 gi|158446809|gb|EDP23804.1| hypothetical protein PEPMIC_01610 [Parvimonas micra ATCC 33270]
          Length = 122

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV   L YI+GIG K+S DI     I P+ RV  L E+EV  IR  I
Sbjct: 1   MARIVGVDLPREKRVEIGLTYIYGIGRKTSNDILRNAGINPDTRVKDLTEAEVALIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR +AMNIKRL ++ CYRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-YLVEGDLRREIAMNIKRLREINCYRGIRHRRGLPVRGQNTKNNARTRKGPKKVSGTK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|149279640|ref|ZP_01885769.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
 gi|149229676|gb|EDM35066.1| 30S ribosomal protein S13 [Pedobacter sp. BAL39]
          Length = 125

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KR    L YI GIG  ++Q I  +  I   ++V    + E+  IR  I
Sbjct: 1   MARISGIDLPRNKRGEIGLTYIFGIGRSTAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT  N+RTRK   K    +
Sbjct: 61  NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|104773566|ref|YP_618546.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513563|ref|YP_812469.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122275667|sp|Q04BZ1|RS13_LACDB RecName: Full=30S ribosomal protein S13
 gi|123077333|sp|Q1GBJ4|RS13_LACDA RecName: Full=30S ribosomal protein S13
 gi|103422647|emb|CAI97255.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092878|gb|ABJ58031.1| SSU ribosomal protein S13P [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|325125198|gb|ADY84528.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 116

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  ++Q+IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEHTAQEICAAAGVSEDVRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115


>gi|227530229|ref|ZP_03960278.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540]
 gi|227349904|gb|EEJ40195.1| ribosomal protein S13 [Lactobacillus vaginalis ATCC 49540]
          Length = 121

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG   +Q I     +  + RV  L   +  QIR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNTRAQKILKDAGVSEDIRVRDLTPEQEEQIRTQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q YQVEGDLRR V +NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DQ-YQVEGDLRREVTLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|110639512|ref|YP_679721.1| 30S ribosomal protein S13 [Cytophaga hutchinsonii ATCC 33406]
 gi|122966555|sp|Q11QD5|RS13_CYTH3 RecName: Full=30S ribosomal protein S13
 gi|110282193|gb|ABG60379.1| SSU ribosomal protein S13P [Cytophaga hutchinsonii ATCC 33406]
          Length = 125

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IP  KR   +L YI+GIG  S+Q I  K  +  +++V +  + E   +R  I
Sbjct: 1   MARISGVDIPDNKRGEVSLTYIYGIGRNSAQSILTKAGVNWDKKVSEWNDDEANAVRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +++ EG L+  V ++IKRLMD+GCYRGLRHR+GLPVRGQRT  N RTRK   K    +
Sbjct: 61  ASEHKTEGALKSEVQLSIKRLMDIGCYRGLRHRKGLPVRGQRTKNNCRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|161523452|ref|YP_001578464.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|167587749|ref|ZP_02380137.1| ribosomal protein S13 [Burkholderia ubonensis Bu]
 gi|189351775|ref|YP_001947403.1| 30S ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|206558664|ref|YP_002229424.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315]
 gi|221201588|ref|ZP_03574626.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M]
 gi|221207337|ref|ZP_03580347.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2]
 gi|221213475|ref|ZP_03586450.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1]
 gi|254253497|ref|ZP_04946815.1| Ribosomal protein S13 [Burkholderia dolosa AUO158]
 gi|226712706|sp|B4E5E3|RS13_BURCJ RecName: Full=30S ribosomal protein S13
 gi|226712707|sp|A9ADL6|RS13_BURM1 RecName: Full=30S ribosomal protein S13
 gi|124896106|gb|EAY69986.1| Ribosomal protein S13 [Burkholderia dolosa AUO158]
 gi|160340881|gb|ABX13967.1| ribosomal protein S13 [Burkholderia multivorans ATCC 17616]
 gi|189335797|dbj|BAG44867.1| small subunit ribosomal protein S13 [Burkholderia multivorans ATCC
           17616]
 gi|198034701|emb|CAR50568.1| 30S ribosomal protein S13 [Burkholderia cenocepacia J2315]
 gi|221166927|gb|EED99398.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD1]
 gi|221172925|gb|EEE05362.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2]
 gi|221178404|gb|EEE10813.1| 30S ribosomal protein S13 [Burkholderia multivorans CGD2M]
 gi|325529701|gb|EGD06564.1| 30S ribosomal protein S13 [Burkholderia sp. TJI49]
          Length = 121

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   S+ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|328958705|ref|YP_004376091.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4]
 gi|328675029|gb|AEB31075.1| 30S ribosomal protein S13 [Carnobacterium sp. 17-4]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  ++Q +     +  E RV  L   ++  IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    R
Sbjct: 61  DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSIAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|320009077|gb|ADW03927.1| 30S ribosomal protein S13 [Streptomyces flavogriseus ATCC 33331]
          Length = 126

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILAAAGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|157164203|ref|YP_001467698.1| 30S ribosomal protein S13 [Campylobacter concisus 13826]
 gi|166231905|sp|A7ZFZ0|RS13_CAMC1 RecName: Full=30S ribosomal protein S13
 gi|112800821|gb|EAT98165.1| ribosomal protein S13p/S18e [Campylobacter concisus 13826]
          Length = 122

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+   L YI+GIG   S+ I +   I  ++RV++L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVYELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK   K   A 
Sbjct: 61  QEHHVVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 TK 122


>gi|311070789|ref|YP_003975712.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942]
 gi|310871306|gb|ADP34781.1| 30S ribosomal protein S13 [Bacillus atrophaeus 1942]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAQQVLKEAGVSEDTRVRDLTEDELGKIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|294497009|ref|YP_003560709.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551]
 gi|295702374|ref|YP_003595449.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319]
 gi|294346946|gb|ADE67275.1| 30S ribosomal protein S13 [Bacillus megaterium QM B1551]
 gi|294800033|gb|ADF37099.1| 30S ribosomal protein S13 [Bacillus megaterium DSM 319]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  +++ +  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRPTAEKVLAEAGVSEDTRVRDLTEEELGKIRDIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ +  NARTRK   +    +
Sbjct: 61  DS-YKVEGDLRREVSLNIKRLIEIGSYRGIRHRRSLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|302379821|ref|ZP_07268305.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3]
 gi|302312409|gb|EFK94406.1| 30S ribosomal protein S13 [Finegoldia magna ACS-171-V-Col3]
          Length = 116

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + +Y  EGDLRR VAMNIKRL ++ CYRGLRH++GLPVRGQ T  NARTRK   K
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGLRHKKGLPVRGQHTKNNARTRKGPRK 114


>gi|111220571|ref|YP_711365.1| 30S ribosomal protein S13 [Frankia alni ACN14a]
 gi|123143523|sp|Q0RRP6|RS13_FRAAA RecName: Full=30S ribosomal protein S13
 gi|111148103|emb|CAJ59771.1| 30S ribosomal subunit protein S13 [Frankia alni ACN14a]
          Length = 126

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 83/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S++      + P+ RV  L E E++++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRTRSRETLAATGVNPDTRVRDLSEDEIVRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|258651409|ref|YP_003200565.1| 30S ribosomal protein S13 [Nakamurella multipartita DSM 44233]
 gi|258554634|gb|ACV77576.1| ribosomal protein S13 [Nakamurella multipartita DSM 44233]
          Length = 125

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   S ++     I P+ R   L + +V+ +R AI
Sbjct: 1   MARLVGVDLPRDKRMEIALTYIYGIGRTRSLELLAATGISPDLRSKDLTDEDVLALRDAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +  D +VEGDLRR V  +I+R M++G Y+GLRHRR LPVRGQRT TNARTRK   K    
Sbjct: 61  DAADLKVEGDLRREVQADIRRKMEIGSYQGLRHRRHLPVRGQRTKTNARTRKGPKKTIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|224373706|ref|YP_002608078.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH]
 gi|254811159|sp|B9L6U0|RS13_NAUPA RecName: Full=30S ribosomal protein S13
 gi|223589832|gb|ACM93568.1| ribosomal protein S13p/S18e [Nautilia profundicola AmH]
          Length = 122

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K++  AL YI+GIG  +S+ I     I PE+RV++L E EV  + + I
Sbjct: 1   MARIAGIDLPKKKKIEYALPYIYGIGLTTSRKILKDTGIDPEKRVYELTEDEVSILNKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEG+LR+ V +NIK LMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   A+
Sbjct: 61  QSNYIVEGELRKIVQLNIKELMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGKRKTVGAK 120

Query: 121 KR 122
            +
Sbjct: 121 AK 122


>gi|182436602|ref|YP_001824321.1| 30S ribosomal protein S13 [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|326777224|ref|ZP_08236489.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1]
 gi|226712788|sp|B1W3Y2|RS13_STRGG RecName: Full=30S ribosomal protein S13
 gi|178465118|dbj|BAG19638.1| putative 30S ribosomal protein S13 [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326657557|gb|EGE42403.1| 30S ribosomal protein S13 [Streptomyces cf. griseus XylebKG-1]
          Length = 126

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR V  NI+R +++GCY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREVQANIRRKVEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225850760|ref|YP_002730994.1| 30S ribosomal protein S13 [Persephonella marina EX-H1]
 gi|225644837|gb|ACO03023.1| 30S ribosomal protein S13 [Persephonella marina EX-H1]
          Length = 116

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/115 (59%), Positives = 87/115 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           EQ+Y+VEGDLRR VA+NIKRLMD+GCYRG+RHR GLPVRGQRT TNA+TR+   +
Sbjct: 61  EQNYKVEGDLRREVAVNIKRLMDMGCYRGIRHRLGLPVRGQRTKTNAKTRRGRKR 115


>gi|142461|gb|AAA22215.1| ribosomal protein S13 [Bacillus subtilis]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  ++Q +  +  +  + RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRVRDLTEEELGKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DK-LKVEGDLRREVSLNIKRLIEIGTYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|229592881|ref|YP_002875000.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25]
 gi|259494687|sp|C3K2V4|RS13_PSEFS RecName: Full=30S ribosomal protein S13
 gi|229364747|emb|CAY52728.1| 30S ribosomal protein S13 [Pseudomonas fluorescens SBW25]
 gi|310941661|dbj|BAJ24184.1| 30S ribosomal protein S13 [Pseudomonas fluorescens]
          Length = 118

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADTGVNPAAKIKDLSDEQIELLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|50364963|ref|YP_053388.1| 30S ribosomal protein S13 [Mesoplasma florum L1]
 gi|81391972|sp|Q6F1W9|RS13_MESFL RecName: Full=30S ribosomal protein S13
 gi|50363519|gb|AAT75504.1| 30S ribosomal protein S13 [Mesoplasma florum L1]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  +SQ + +KL I  + R   L E ++  I   I
Sbjct: 1   MARISGVEIPNEKRVVISLTYIYGIGLSTSQKVLSKLNISEDVRTRDLTEEQIKAISTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +++VEG+LRR V++NIKRLM++GCYRGLRHR+GLPVRGQ + TNART K   K    +
Sbjct: 61  S-NFKVEGELRREVSLNIKRLMEIGCYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|28867876|ref|NP_790495.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|66047754|ref|YP_237595.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a]
 gi|71733419|ref|YP_276684.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|213969236|ref|ZP_03397374.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1]
 gi|237797454|ref|ZP_04585915.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|257483207|ref|ZP_05637248.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289623827|ref|ZP_06456781.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289648920|ref|ZP_06480263.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|289675510|ref|ZP_06496400.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae FF5]
 gi|298489074|ref|ZP_07007096.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|301381743|ref|ZP_07230161.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato Max13]
 gi|302061057|ref|ZP_07252598.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato K40]
 gi|302130802|ref|ZP_07256792.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|302189299|ref|ZP_07265972.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. syringae 642]
 gi|32363285|sp|Q889U9|RS13_PSESM RecName: Full=30S ribosomal protein S13
 gi|75500421|sp|Q4ZMR5|RS13_PSEU2 RecName: Full=30S ribosomal protein S13
 gi|91207716|sp|Q48D58|RS13_PSE14 RecName: Full=30S ribosomal protein S13
 gi|28851112|gb|AAO54190.1| ribosomal protein S13 [Pseudomonas syringae pv. tomato str. DC3000]
 gi|63258461|gb|AAY39557.1| Ribosomal protein S13 [Pseudomonas syringae pv. syringae B728a]
 gi|71553972|gb|AAZ33183.1| ribosomal protein S13 [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|213925914|gb|EEB59471.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tomato T1]
 gi|298156386|gb|EFH97484.1| SSU ribosomal protein S13p (S18e) [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322300|gb|EFW78394.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331958|gb|EFW87894.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330869409|gb|EGH04118.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330879397|gb|EGH13546.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330879420|gb|EGH13569.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|330891910|gb|EGH24571.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330899714|gb|EGH31133.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330940912|gb|EGH43863.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330962503|gb|EGH62763.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. maculicola str.
           ES4326]
 gi|330966889|gb|EGH67149.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|330969799|gb|EGH69865.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aceris str.
           M302273PT]
 gi|330976662|gb|EGH76705.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|330988260|gb|EGH86363.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331012435|gb|EGH92491.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331018182|gb|EGH98238.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
 gi|331020304|gb|EGI00361.1| 30S ribosomal protein S13 [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 118

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|119953289|ref|YP_945498.1| 30S ribosomal protein S13 [Borrelia turicatae 91E135]
 gi|254811131|sp|A1QZT6|RS13_BORT9 RecName: Full=30S ribosomal protein S13
 gi|119862060|gb|AAX17828.1| SSU ribosomal protein S13P [Borrelia turicatae 91E135]
          Length = 125

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K++  AL  I+GIG   + +IC K  I PE+R   L   EV ++R+ I
Sbjct: 1   MARIAGIDLPNNKQLQIALTSIYGIGRARALEICRKTDILPEKRAKDLDNDEVNKLRKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  +AM+IKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSELAMSIKRLMDIACYRGLRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|26987217|ref|NP_742642.1| 30S ribosomal protein S13 [Pseudomonas putida KT2440]
 gi|104779777|ref|YP_606275.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48]
 gi|148545761|ref|YP_001265863.1| 30S ribosomal protein S13 [Pseudomonas putida F1]
 gi|167031521|ref|YP_001666752.1| 30S ribosomal protein S13 [Pseudomonas putida GB-1]
 gi|32363292|sp|Q88QL3|RS13_PSEPK RecName: Full=30S ribosomal protein S13
 gi|158706264|sp|Q1IFU4|RS13_PSEE4 RecName: Full=30S ribosomal protein S13
 gi|166231917|sp|A5VXR9|RS13_PSEP1 RecName: Full=30S ribosomal protein S13
 gi|189044288|sp|B0KK88|RS13_PSEPG RecName: Full=30S ribosomal protein S13
 gi|24981856|gb|AAN66106.1|AE016239_1 ribosomal protein S13 [Pseudomonas putida KT2440]
 gi|95108764|emb|CAK13458.1| 30S ribosomal protein S13 [Pseudomonas entomophila L48]
 gi|148509819|gb|ABQ76679.1| SSU ribosomal protein S13P [Pseudomonas putida F1]
 gi|166858009|gb|ABY96416.1| ribosomal protein S13 [Pseudomonas putida GB-1]
 gi|310941070|dbj|BAJ24409.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941100|dbj|BAJ24424.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941631|dbj|BAJ24169.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|310941991|dbj|BAJ24349.1| 30S ribosomal protein S13 [Pseudomonas putida]
 gi|313496841|gb|ADR58207.1| RpsM [Pseudomonas putida BIRD-1]
          Length = 118

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|84685393|ref|ZP_01013291.1| 30S ribosomal protein S13 [Maritimibacter alkaliphilus HTCC2654]
 gi|84666550|gb|EAQ13022.1| 30S ribosomal protein S13 [Rhodobacterales bacterium HTCC2654]
          Length = 116

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 71/115 (61%), Positives = 83/115 (72%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           NIP  KRV  AL YI GIG  S++ IC    I   RRV++L ++EV+ IR+ I+ +Y VE
Sbjct: 2   NIPTHKRVPIALTYITGIGHTSAKSICEATNIDVTRRVNELSDAEVLTIREHIDANYTVE 61

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           GDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K+
Sbjct: 62  GDLRRETQMNIKRLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKPIAGKKK 116


>gi|261364877|ref|ZP_05977760.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996]
 gi|288566925|gb|EFC88485.1| 30S ribosomal protein S13 [Neisseria mucosa ATCC 25996]
          Length = 120

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  L  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPITKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRLMD+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|22536267|ref|NP_687118.1| 30S ribosomal protein S13 [Streptococcus agalactiae 2603V/R]
 gi|25010157|ref|NP_734552.1| 30S ribosomal protein S13 [Streptococcus agalactiae NEM316]
 gi|76788115|ref|YP_328807.1| 30S ribosomal protein S13 [Streptococcus agalactiae A909]
 gi|76798217|ref|ZP_00780467.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21]
 gi|77406112|ref|ZP_00783186.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B]
 gi|77412629|ref|ZP_00788908.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111]
 gi|54039353|sp|P66391|RS13_STRA5 RecName: Full=30S ribosomal protein S13
 gi|54042124|sp|P66390|RS13_STRA3 RecName: Full=30S ribosomal protein S13
 gi|91207627|sp|Q3K3U6|RS13_STRA1 RecName: Full=30S ribosomal protein S13
 gi|22533088|gb|AAM98990.1|AE014195_9 ribosomal protein S13 [Streptococcus agalactiae 2603V/R]
 gi|23094508|emb|CAD45727.1| ribosomal protein S13 [Streptococcus agalactiae NEM316]
 gi|76563172|gb|ABA45756.1| ribosomal protein S13 [Streptococcus agalactiae A909]
 gi|76586426|gb|EAO62934.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 18RS21]
 gi|77161321|gb|EAO72353.1| ribosomal protein S13p/S18e [Streptococcus agalactiae CJB111]
 gi|77175293|gb|EAO78088.1| ribosomal protein S13p/S18e [Streptococcus agalactiae H36B]
 gi|319743971|gb|EFV96351.1| 30S ribosomal protein S13 [Streptococcus agalactiae ATCC 13813]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|86149387|ref|ZP_01067618.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85840169|gb|EAQ57427.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 121

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/120 (56%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++R H+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDKVGISYDKRFHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|306821594|ref|ZP_07455192.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550339|gb|EFM38332.1| 30S ribosomal protein S13 [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 122

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+  L YI GIG ++S  I     I    R+  L E +V  +R+ I
Sbjct: 1   MARIAGVDLPRDKRVIIGLTYIFGIGKQTSAKILATTGIDESIRIKDLSEEQVNLLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDL+R +++NIKRL D+ CYRGLRH +GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  DNNYTVEGDLKREISLNIKRLRDIRCYRGLRHMKGLPVRGQKTKTNARTRKGPKRIVGRK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|189460707|ref|ZP_03009492.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136]
 gi|198273980|ref|ZP_03206512.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135]
 gi|189432666|gb|EDV01651.1| hypothetical protein BACCOP_01354 [Bacteroides coprocola DSM 17136]
 gi|198273058|gb|EDY97327.1| hypothetical protein BACPLE_00116 [Bacteroides plebeius DSM 17135]
          Length = 126

 Score =  171 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|223042524|ref|ZP_03612573.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14]
 gi|242371873|ref|ZP_04817447.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1]
 gi|314934274|ref|ZP_07841633.1| 30S ribosomal protein S13 [Staphylococcus caprae C87]
 gi|222444187|gb|EEE50283.1| 30S ribosomal protein S13 [Staphylococcus capitis SK14]
 gi|242350380|gb|EES41981.1| 30S ribosomal protein S13 [Staphylococcus epidermidis M23864:W1]
 gi|313652204|gb|EFS15967.1| 30S ribosomal protein S13 [Staphylococcus caprae C87]
          Length = 121

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|313887064|ref|ZP_07820763.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923475|gb|EFR34285.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332176609|gb|AEE12299.1| 30S ribosomal protein S13 [Porphyromonas asaccharolytica DSM 20707]
          Length = 126

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  S+  I +   +    +V    + +   IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQ 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I   Y+VEGDLR    +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK   K    
Sbjct: 61  ISSGYKVEGDLRSETQLNIKRLMDIGCYRGIRHRLGLPLRGQSTKNNARTRKGKRKTVAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|269955460|ref|YP_003325249.1| 30S ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894]
 gi|269304141|gb|ACZ29691.1| ribosomal protein S13 [Xylanimonas cellulosilytica DSM 15894]
          Length = 124

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+G+G   +        I P+ RV  L +++++ +R  +
Sbjct: 1   MARLIGVDLPREKRVEIALTYIYGVGRTRASQTLEATGISPDVRVKDLDDAQLVALRDYL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGSFKLEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|325269511|ref|ZP_08136127.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608]
 gi|325856026|ref|ZP_08171915.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A]
 gi|327313214|ref|YP_004328651.1| 30S ribosomal protein S13 [Prevotella denticola F0289]
 gi|324988130|gb|EGC20097.1| 30S ribosomal protein S13 [Prevotella multiformis DSM 16608]
 gi|325483698|gb|EGC86662.1| 30S ribosomal protein S13 [Prevotella denticola CRIS 18C-A]
 gi|326945033|gb|AEA20918.1| 30S ribosomal protein S13 [Prevotella denticola F0289]
          Length = 146

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 21  MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREI 80

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 81  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 133


>gi|15610596|ref|NP_217977.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Rv]
 gi|15843055|ref|NP_338092.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31794636|ref|NP_857129.1| 30S ribosomal protein S13 [Mycobacterium bovis AF2122/97]
 gi|121639380|ref|YP_979604.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663325|ref|YP_001284848.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148824670|ref|YP_001289424.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis F11]
 gi|167966773|ref|ZP_02549050.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|215405499|ref|ZP_03417680.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|215413374|ref|ZP_03422058.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|215428967|ref|ZP_03426886.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T92]
 gi|218755238|ref|ZP_03534034.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis GM 1503]
 gi|224991876|ref|YP_002646565.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800505|ref|YP_003033506.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           1435]
 gi|254234052|ref|ZP_04927377.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|254366061|ref|ZP_04982106.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552563|ref|ZP_05143010.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188515|ref|ZP_05765989.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis CPHL_A]
 gi|260202643|ref|ZP_05770134.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|260206831|ref|ZP_05774322.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis K85]
 gi|289445060|ref|ZP_06434804.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289449164|ref|ZP_06438908.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289555731|ref|ZP_06444941.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605]
 gi|289576196|ref|ZP_06456423.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289747293|ref|ZP_06506671.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289752184|ref|ZP_06511562.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289763642|ref|ZP_06523020.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503]
 gi|294995766|ref|ZP_06801457.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 210]
 gi|297636119|ref|ZP_06953899.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN 4207]
 gi|297733119|ref|ZP_06962237.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN R506]
 gi|298526944|ref|ZP_07014353.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|306777808|ref|ZP_07416145.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|306782526|ref|ZP_07420863.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|306786345|ref|ZP_07424667.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|306790714|ref|ZP_07429036.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|306795243|ref|ZP_07433545.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|306799432|ref|ZP_07437734.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|306805279|ref|ZP_07441947.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|306809464|ref|ZP_07446132.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|306969572|ref|ZP_07482233.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|306973926|ref|ZP_07486587.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|307081635|ref|ZP_07490805.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|307086241|ref|ZP_07495354.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|313660450|ref|ZP_07817330.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis KZN V2475]
 gi|6094153|sp|O06327|RS13_MYCTU RecName: Full=30S ribosomal protein S13
 gi|38605717|sp|P45813|RS13_MYCBO RecName: Full=30S ribosomal protein S13
 gi|158706248|sp|A1KPE6|RS13_MYCBP RecName: Full=30S ribosomal protein S13
 gi|158706252|sp|A5U8D6|RS13_MYCTA RecName: Full=30S ribosomal protein S13
 gi|254811157|sp|C1AHR8|RS13_MYCBT RecName: Full=30S ribosomal protein S13
 gi|2104383|emb|CAB08726.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium tuberculosis
           H37Rv]
 gi|13883399|gb|AAK47906.1| ribosomal protein S13 [Mycobacterium tuberculosis CDC1551]
 gi|31620233|emb|CAD95676.1| PROBABLE 30S RIBOSOMAL PROTEIN S13 RPSM [Mycobacterium bovis
           AF2122/97]
 gi|121495028|emb|CAL73514.1| Probable 30S ribosomal protein S13 rpsM [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599581|gb|EAY58685.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis C]
 gi|134151574|gb|EBA43619.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507477|gb|ABQ75286.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis H37Ra]
 gi|148723197|gb|ABR07822.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis F11]
 gi|224774991|dbj|BAH27797.1| 30S ribosomal protein S13 [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322008|gb|ACT26611.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           1435]
 gi|289417979|gb|EFD15219.1| SSU ribosomal protein S13 [Mycobacterium tuberculosis T46]
 gi|289422122|gb|EFD19323.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis CPHL_A]
 gi|289440363|gb|EFD22856.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN 605]
 gi|289540627|gb|EFD45205.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis K85]
 gi|289687821|gb|EFD55309.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 02_1987]
 gi|289692771|gb|EFD60200.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T92]
 gi|289711148|gb|EFD75164.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis GM 1503]
 gi|298496738|gb|EFI32032.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis 94_M4241A]
 gi|308213892|gb|EFO73291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu001]
 gi|308324843|gb|EFP13694.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu002]
 gi|308329097|gb|EFP17948.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu003]
 gi|308332905|gb|EFP21756.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu004]
 gi|308336565|gb|EFP25416.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu005]
 gi|308340440|gb|EFP29291.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu006]
 gi|308344304|gb|EFP33155.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu007]
 gi|308348195|gb|EFP37046.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu008]
 gi|308352919|gb|EFP41770.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu009]
 gi|308356762|gb|EFP45613.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu010]
 gi|308360707|gb|EFP49558.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu011]
 gi|308364322|gb|EFP53173.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis SUMu012]
 gi|323717944|gb|EGB27133.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905306|gb|EGE52239.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis W-148]
 gi|328460236|gb|AEB05659.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis KZN
           4207]
          Length = 124

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK   +    +
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|118475454|ref|YP_891266.1| 30S ribosomal protein S13 [Campylobacter fetus subsp. fetus 82-40]
 gi|158706219|sp|A0RM33|RS13_CAMFF RecName: Full=30S ribosomal protein S13
 gi|118414680|gb|ABK83100.1| ribosomal protein S13p/S18e [Campylobacter fetus subsp. fetus
           82-40]
          Length = 122

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV   L YI+GIG  +S+ I N + I  ++RV++L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILNAVGISYDKRVYELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK   K   A 
Sbjct: 61  QEHYMVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 TK 122


>gi|304438882|ref|ZP_07398805.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372548|gb|EFM26131.1| 30S ribosomal protein S13 [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 120

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG   S +I     + P+ RV  L E+EV +IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIFGIGRSRSNEILKNAEVNPDTRVKDLTEAEVARIRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR VAMNIKRL ++ CYRG+RH RGLPVRGQ T  NARTRK   K  V++
Sbjct: 61  DK-YHVEGDLRRDVAMNIKRLREIKCYRGIRHMRGLPVRGQNTKNNARTRKGPKKL-VSK 118

Query: 121 KR 122
           K+
Sbjct: 119 KK 120


>gi|319893176|ref|YP_004150051.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162872|gb|ADV06415.1| SSU ribosomal protein S13p (S18e) [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323463776|gb|ADX75929.1| ribosomal protein S13 [Staphylococcus pseudintermedius ED99]
          Length = 121

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  S+Q I ++  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGIGKTSAQKILSEANVSEDTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPV GQ+T  NARTRK   K    +
Sbjct: 61  D-GYKVEGDLRRETNLNIKRLMEISSYRGIRHRRGLPVNGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|325104844|ref|YP_004274498.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145]
 gi|324973692|gb|ADY52676.1| SSU ribosomal protein S13P [Pedobacter saltans DSM 12145]
          Length = 125

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI+GIG K++Q+I  +  I  +++V +  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIYGIGRKTAQNILTQAGISFDKKVQEWTDEELTAIRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEG LR  V +NIKRLMD+GCYRGLRHR+GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SESIKVEGQLRSEVQLNIKRLMDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|171060596|ref|YP_001792945.1| 30S ribosomal protein S13 [Leptothrix cholodnii SP-6]
 gi|226712756|sp|B1Y8B4|RS13_LEPCP RecName: Full=30S ribosomal protein S13
 gi|170778041|gb|ACB36180.1| ribosomal protein S13 [Leptothrix cholodnii SP-6]
          Length = 121

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+G+G  ++Q IC    I   ++V  L +S++ +IR+ +
Sbjct: 1   MARIAGINIPPHKHAEIGLTSIYGVGRTTAQKICEACGIAYNKKVKDLDDSDLEKIREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TN+RTRK   KG  A 
Sbjct: 61  GR-LTIEGDLRREISINIKRLMDLGCYRGFRHRRGLPVRGQRTRTNSRTRKGPKKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|88854652|ref|ZP_01129318.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1]
 gi|88815813|gb|EAR25669.1| 30S ribosomal protein S13 [marine actinobacterium PHSC20C1]
          Length = 124

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +        I  E RVH L + ++I +R  I
Sbjct: 1   MARLAGVDIPRDKRVEVALTYIYGVGRTRALKTLADTQISGEIRVHDLTDDQLIALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++QVEGDLRR VA +I+R +++G Y+G+RHR+GLPV GQRT TNARTRK   +    +
Sbjct: 61  EGNFQVEGDLRREVAADIRRKVEIGSYQGIRHRKGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|288554751|ref|YP_003426686.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4]
 gi|288545911|gb|ADC49794.1| 30S ribosomal protein S13 [Bacillus pseudofirmus OF4]
          Length = 121

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L YI+G+G   S +I  +  +  + RV  L E E+ +IR+A+
Sbjct: 1   MARVAGVDIPRDKRVVVSLTYIYGVGKTKSSEILAEAGVSEDTRVRDLTEEELGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  EA-HTVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261367777|ref|ZP_05980660.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176]
 gi|282570575|gb|EFB76110.1| 30S ribosomal protein S13 [Subdoligranulum variabile DSM 15176]
          Length = 123

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L Y++GIG  ++ +I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRIQVGLTYVYGIGQSTADEILAGTGINPDTRVKDLTSDEEAKIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +++   VEGDLRR VA++IKRL ++ CYRG+RHR+GLP RGQRT TNART K   +    
Sbjct: 61  DKNNIMVEGDLRRNVALDIKRLTEIQCYRGVRHRKGLPCRGQRTKTNARTCKGPKRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|258648135|ref|ZP_05735604.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259]
 gi|260852016|gb|EEX71885.1| 30S ribosomal protein S13 [Prevotella tannerae ATCC 51259]
          Length = 126

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +    +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRGIKVSDWTDDQAGKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  ISNEYKVEGDLRGEIQMNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|229823513|ref|ZP_04449582.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271]
 gi|229786957|gb|EEP23071.1| hypothetical protein GCWU000282_00811 [Catonella morbi ATCC 51271]
          Length = 120

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG K++Q +  +  +  + RV  L   E+ +IR+ I
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGIGLKTAQQVLKQANVSEDTRVKDLSNDELDRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR +++NIKRL ++G YRGLRHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  D-GLKVEGDLRREISLNIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPKKMVTGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|198282661|ref|YP_002218982.1| 30S ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667353|ref|YP_002424854.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226712683|sp|B7J4A1|RS13_ACIF2 RecName: Full=30S ribosomal protein S13
 gi|226712684|sp|B5EM96|RS13_ACIF5 RecName: Full=30S ribosomal protein S13
 gi|198247182|gb|ACH82775.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519566|gb|ACK80152.1| ribosomal protein S13 [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 118

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/118 (56%), Positives = 82/118 (69%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K++  AL YI+GIG   ++ + +   I  + RV  + E E+ +IR  +
Sbjct: 1   MARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRVKDISEPELERIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            + + VEGDLRR V MNIKRLMDLGCYRG+RHRRGLPV GQRT TNARTRK   K   
Sbjct: 61  AK-FLVEGDLRREVTMNIKRLMDLGCYRGIRHRRGLPVHGQRTKTNARTRKGPAKSIT 117


>gi|225849520|ref|YP_002729685.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644417|gb|ACN99467.1| 30S ribosomal protein S13 [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 116

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/115 (58%), Positives = 86/115 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPEELNTIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           EQ+Y+VEGDLRR VA+ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+   K
Sbjct: 61  EQNYKVEGDLRREVAVAIKRLVDMGCYRGVRHRLGLPVRGQRTKTNAKTRRGKRK 115


>gi|152980690|ref|YP_001355078.1| 30S ribosomal protein S13 [Janthinobacterium sp. Marseille]
 gi|158706240|sp|A6T3I1|RS13_JANMA RecName: Full=30S ribosomal protein S13
 gi|151280767|gb|ABR89177.1| small subunit ribosomal protein S13 [Janthinobacterium sp.
           Marseille]
          Length = 121

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   SQ IC+   +P  ++V  L ++E+ ++R  I
Sbjct: 1   MARIAGVNVPNHQHTVIGLTAIYGIGRPRSQKICDTAGVPTTKKVKDLDDNELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK   K   + 
Sbjct: 61  AK-FIVEGDLRRELSMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|84494747|ref|ZP_00993866.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649]
 gi|84384240|gb|EAQ00120.1| 30S ribosomal protein S13 [Janibacter sp. HTCC2649]
          Length = 125

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G  SSQ       I P  RV  L +  ++ +R  I
Sbjct: 1   MARLQGVDLPREKRVEIALTYIFGVGRSSSQKALAATGIDPNVRVKDLTDVNLVALRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++ +VEGDLRR V  +I+R +++G Y+G RHR GLPV GQRT TNARTRK   +    +
Sbjct: 61  DENLKVEGDLRREVQADIRRKVEIGSYQGRRHRSGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|78064947|ref|YP_367716.1| 30S ribosomal protein S13 [Burkholderia sp. 383]
 gi|107024280|ref|YP_622607.1| 30S ribosomal protein S13 [Burkholderia cenocepacia AU 1054]
 gi|116688395|ref|YP_834018.1| 30S ribosomal protein S13 [Burkholderia cenocepacia HI2424]
 gi|170731705|ref|YP_001763652.1| 30S ribosomal protein S13 [Burkholderia cenocepacia MC0-3]
 gi|254246580|ref|ZP_04939901.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184]
 gi|91207692|sp|Q39KE4|RS13_BURS3 RecName: Full=30S ribosomal protein S13
 gi|123371102|sp|Q1BRX1|RS13_BURCA RecName: Full=30S ribosomal protein S13
 gi|158706217|sp|A0K3P8|RS13_BURCH RecName: Full=30S ribosomal protein S13
 gi|226712705|sp|B1JU45|RS13_BURCC RecName: Full=30S ribosomal protein S13
 gi|77965692|gb|ABB07072.1| SSU ribosomal protein S13P [Burkholderia sp. 383]
 gi|105894469|gb|ABF77634.1| SSU ribosomal protein S13P [Burkholderia cenocepacia AU 1054]
 gi|116646484|gb|ABK07125.1| SSU ribosomal protein S13P [Burkholderia cenocepacia HI2424]
 gi|124871356|gb|EAY63072.1| 30S ribosomal protein S13 [Burkholderia cenocepacia PC184]
 gi|169814947|gb|ACA89530.1| ribosomal protein S13 [Burkholderia cenocepacia MC0-3]
          Length = 121

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   S+ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRSRSICVAAGVDFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|216263668|ref|ZP_03435663.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1]
 gi|215980512|gb|EEC21333.1| ribosomal protein S13p/S18e [Borrelia afzelii ACA-1]
          Length = 125

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 84/121 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK  I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|320352936|ref|YP_004194275.1| 30S ribosomal protein S13P [Desulfobulbus propionicus DSM 2032]
 gi|320121438|gb|ADW16984.1| SSU ribosomal protein S13P [Desulfobulbus propionicus DSM 2032]
          Length = 122

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 71/122 (58%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K + RAL YI+GIG  S++ I +K  +P +     L   +V +IR  I
Sbjct: 1   MARIAGVDLPRNKHMDRALTYIYGIGLTSARQILDKADLPYQMNSDDLSADDVNRIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y VEGD RR V+M+IKRLMDLGCYRG RHRR LPVRGQRT TNARTRK   +G   R
Sbjct: 61  ENSYVVEGDRRREVSMDIKRLMDLGCYRGRRHRRSLPVRGQRTKTNARTRKGPRRGAAVR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|154173907|ref|YP_001409134.1| 30S ribosomal protein S13 [Campylobacter curvus 525.92]
 gi|166231906|sp|A7H0Z2|RS13_CAMC5 RecName: Full=30S ribosomal protein S13
 gi|112802271|gb|EAT99615.1| ribosomal protein S13p/S18e [Campylobacter curvus 525.92]
          Length = 122

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+   L YI+GIG   S+ I +   I  ++RV +L E E   IR+ I
Sbjct: 1   MARIAGVDLPNKKRIEYGLTYIYGIGLYKSRQILDAAGISYDKRVFELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ + VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK   K   A 
Sbjct: 61  QEHHIVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGRRKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 TK 122


>gi|228474843|ref|ZP_04059574.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119]
 gi|314935855|ref|ZP_07843207.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis
           C80]
 gi|228271506|gb|EEK12874.1| 30S ribosomal protein S13 [Staphylococcus hominis SK119]
 gi|313656420|gb|EFS20160.1| 30S ribosomal protein S13 [Staphylococcus hominis subsp. hominis
           C80]
          Length = 121

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRVVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  D-GYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|313123133|ref|YP_004033392.1| 30S ribosomal protein s13 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312279696|gb|ADQ60415.1| 30S ribosomal protein S13 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 116

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  ++++IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGAKRS 115


>gi|296113776|ref|YP_003627714.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4]
 gi|295921470|gb|ADG61821.1| 30S ribosomal protein S13 [Moraxella catarrhalis RH4]
 gi|326562121|gb|EGE12449.1| 30S ribosomal protein S13 [Moraxella catarrhalis 7169]
 gi|326564514|gb|EGE14740.1| 30S ribosomal protein S13 [Moraxella catarrhalis 46P47B1]
 gi|326565697|gb|EGE15860.1| 30S ribosomal protein S13 [Moraxella catarrhalis 12P80B1]
 gi|326566266|gb|EGE16418.1| 30S ribosomal protein S13 [Moraxella catarrhalis 103P14B1]
 gi|326567082|gb|EGE17204.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC1]
 gi|326568346|gb|EGE18426.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC7]
 gi|326572247|gb|EGE22242.1| 30S ribosomal protein S13 [Moraxella catarrhalis BC8]
 gi|326574589|gb|EGE24529.1| 30S ribosomal protein S13 [Moraxella catarrhalis O35E]
 gi|326574845|gb|EGE24775.1| 30S ribosomal protein S13 [Moraxella catarrhalis 101P30B1]
 gi|326576169|gb|EGE26084.1| 30S ribosomal protein S13 [Moraxella catarrhalis CO72]
          Length = 118

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +++ I   + I    ++  L +S++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTTAKQILAAVGIEETTKIGSLDDSQLDAVRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +Y VEGDLRR V+MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK   K  
Sbjct: 61  -ANYTVEGDLRREVSMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRKGPRKAI 116


>gi|288925691|ref|ZP_06419623.1| 30S ribosomal protein S13 [Prevotella buccae D17]
 gi|315606480|ref|ZP_07881495.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574]
 gi|288337629|gb|EFC75983.1| 30S ribosomal protein S13 [Prevotella buccae D17]
 gi|315251886|gb|EFU31860.1| 30S ribosomal protein S13 [Prevotella buccae ATCC 33574]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|256847787|ref|ZP_05553232.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN]
 gi|256715476|gb|EEU30452.1| 30S ribosomal protein S13 [Lactobacillus coleohominis 101-4-CHN]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNSTAQKILADAGVSEDVRVRDLTPDQEEKIRSQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  E-NIKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163790170|ref|ZP_02184604.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7]
 gi|159874661|gb|EDP68731.1| 30S ribosomal protein S13 [Carnobacterium sp. AT7]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV+ +L YI+GIG  ++Q +     +  E RV  L   ++  IR  I
Sbjct: 1   MARIAGVDIPRDKRVIISLTYIYGIGKTTAQKVLKDAGVSEEIRVRDLSNDQLDAIRATI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V+ +IKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DT-LKVEGDLRREVSQDIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPAKSITGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|325272030|ref|ZP_08138473.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51]
 gi|310941811|dbj|BAJ24259.1| 30S ribosomal protein S13 [Pseudomonas fulva]
 gi|324102834|gb|EGC00238.1| 30S ribosomal protein S13 [Pseudomonas sp. TJI-51]
          Length = 118

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICVDAGVNPAAKIKDLSDEQIETLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR V M IKRLMDLGCYRGLRHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLRRDVNMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPI 116


>gi|257459217|ref|ZP_05624336.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268]
 gi|257443602|gb|EEV18726.1| 30S ribosomal protein S13 [Campylobacter gracilis RM3268]
          Length = 122

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +   I  ++RV  L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFTSRKILDAAGISYDKRVADLSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK   K   A 
Sbjct: 61  QEHYMVEGDLRKQVAMDIKALMDLGGYRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 AK 122


>gi|157149729|ref|YP_001451211.1| 30S ribosomal protein S13 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262283558|ref|ZP_06061323.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA]
 gi|189044302|sp|A8AZK1|RS13_STRGC RecName: Full=30S ribosomal protein S13
 gi|157074523|gb|ABV09206.1| ribosomal protein S13p/S18e [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|262260615|gb|EEY79316.1| ribosomal protein S13p/S18e [Streptococcus sp. 2_1_36FAA]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDVRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|282878781|ref|ZP_06287549.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310]
 gi|317503957|ref|ZP_07961965.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606]
 gi|281299172|gb|EFA91573.1| 30S ribosomal protein S13 [Prevotella buccalis ATCC 35310]
 gi|315664983|gb|EFV04642.1| 30S ribosomal protein S13 [Prevotella salivae DSM 15606]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|53715442|ref|YP_101434.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46]
 gi|60683414|ref|YP_213558.1| 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343]
 gi|253566694|ref|ZP_04844147.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5]
 gi|255011670|ref|ZP_05283796.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
 gi|265767572|ref|ZP_06095238.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16]
 gi|313149506|ref|ZP_07811699.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
 gi|81313534|sp|Q5L8D3|RS13_BACFN RecName: Full=30S ribosomal protein S13
 gi|81381130|sp|Q64NN2|RS13_BACFR RecName: Full=30S ribosomal protein S13
 gi|52218307|dbj|BAD50900.1| 30S ribosomal protein S13 [Bacteroides fragilis YCH46]
 gi|60494848|emb|CAH09655.1| putative 30S ribosomal protein S13 [Bacteroides fragilis NCTC 9343]
 gi|251944866|gb|EES85341.1| 30S ribosomal protein S13 [Bacteroides sp. 3_2_5]
 gi|263252877|gb|EEZ24389.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_16]
 gi|301164899|emb|CBW24460.1| putative 30S ribosomal protein S13 [Bacteroides fragilis 638R]
 gi|313138273|gb|EFR55633.1| 30S ribosomal protein S13 [Bacteroides fragilis 3_1_12]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|326692214|ref|ZP_08229219.1| 30S ribosomal protein S13 [Leuconostoc argentinum KCTC 3773]
          Length = 123

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q I  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLTADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKALQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|189465441|ref|ZP_03014226.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM
           17393]
 gi|224537840|ref|ZP_03678379.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|189437715|gb|EDV06700.1| hypothetical protein BACINT_01794 [Bacteroides intestinalis DSM
           17393]
 gi|224520526|gb|EEF89631.1| hypothetical protein BACCELL_02727 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEVALTYIYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +++VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEFKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|283953796|ref|ZP_06371327.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414]
 gi|283794837|gb|EFC33575.1| ribosomal protein S13/S18 [Campylobacter jejuni subsp. jejuni 414]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 91/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG  +S+ I +K+ I  ++RVH+L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLFASRKILDKVGISYDKRVHELSEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLR+ VAM+IK LMDLG +RGLRHR+GLPVRGQ+T TNARTRK   K   A+
Sbjct: 61  QENYMVEGDLRKQVAMDIKALMDLGSFRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAK 120


>gi|121592835|ref|YP_984731.1| 30S ribosomal protein S13 [Acidovorax sp. JS42]
 gi|222109615|ref|YP_002551879.1| 30S ribosomal protein s13 [Acidovorax ebreus TPSY]
 gi|319764617|ref|YP_004128554.1| 30S ribosomal protein s13 [Alicycliphilus denitrificans BC]
 gi|330826874|ref|YP_004390177.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601]
 gi|158706210|sp|A1W330|RS13_ACISJ RecName: Full=30S ribosomal protein S13
 gi|254811148|sp|B9MBV9|RS13_DIAST RecName: Full=30S ribosomal protein S13
 gi|120604915|gb|ABM40655.1| SSU ribosomal protein S13P [Acidovorax sp. JS42]
 gi|221729059|gb|ACM31879.1| ribosomal protein S13 [Acidovorax ebreus TPSY]
 gi|317119178|gb|ADV01667.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans BC]
 gi|329312246|gb|AEB86661.1| 30S ribosomal protein S13 [Alicycliphilus denitrificans K601]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   ++ IC    I   ++V +L ++++ +IR  I
Sbjct: 1   MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300775036|ref|ZP_07084899.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910]
 gi|300506851|gb|EFK37986.1| 30S ribosomal protein S13 [Chryseobacterium gleum ATCC 35910]
          Length = 125

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI+G+G  +S +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIYGVGRSTSSEILKAAGISEDKKVNEWNDDELAAIRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SENVKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254383147|ref|ZP_04998501.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1]
 gi|194342046|gb|EDX23012.1| 30S ribosomal protein S13 [Streptomyces sp. Mg1]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ G+G   S++I     + P+ RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGVGRTRSKEILAATGVNPDTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREIQADIRRKVEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|184155967|ref|YP_001844307.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956]
 gi|227515511|ref|ZP_03945560.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931]
 gi|260662776|ref|ZP_05863670.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN]
 gi|226712752|sp|B2GDU5|RS13_LACF3 RecName: Full=30S ribosomal protein S13
 gi|183227311|dbj|BAG27827.1| 30S ribosomal protein S13 [Lactobacillus fermentum IFO 3956]
 gi|227086124|gb|EEI21436.1| ribosomal protein S13 [Lactobacillus fermentum ATCC 14931]
 gi|260552857|gb|EEX25856.1| 30S ribosomal protein S13 [Lactobacillus fermentum 28-3-CHN]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILANAGVSEDIRVRDLTPDQEEKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q  +VEGDLRR V++NIKRL ++G YRG+RHR GLPVRGQ T  NARTRK        +
Sbjct: 61  DQ-IKVEGDLRREVSLNIKRLQEIGSYRGMRHRHGLPVRGQHTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|26554442|ref|NP_758376.1| 30S ribosomal protein S13 [Mycoplasma penetrans HF-2]
 gi|32363326|sp|Q8EUD6|RS13_MYCPE RecName: Full=30S ribosomal protein S13
 gi|26454452|dbj|BAC44780.1| ribosomal protein S13 [Mycoplasma penetrans HF-2]
          Length = 124

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KRVV +L YI GIG   SQ+I +K  I   ++V  L E E+  IR+ I
Sbjct: 1   MARILGVDIPNNKRVVISLTYIFGIGKSRSQEILSKAKIDENKKVSALSEEELATIRK-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y +EGDLRR VAMNIKRLM++G YRG+RHRR LPVRGQRT  NARTRK   K    +
Sbjct: 60  ASEYVIEGDLRREVAMNIKRLMEIGSYRGIRHRRNLPVRGQRTKCNARTRKGPRKTVANK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|52426081|ref|YP_089218.1| 30S ribosomal protein S13 [Mannheimia succiniciproducens MBEL55E]
 gi|81386597|sp|Q65QX7|RS13_MANSM RecName: Full=30S ribosomal protein S13
 gi|52308133|gb|AAU38633.1| RpsM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 118

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRSQAICAAAGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|242237881|ref|YP_002986062.1| 30S ribosomal protein S13 [Dickeya dadantii Ech703]
 gi|242129938|gb|ACS84240.1| ribosomal protein S13 [Dickeya dadantii Ech703]
          Length = 118

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ IC    I  + ++ +L E ++  +R+ +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAICAAAGIAEDVKISELSEEQIETLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|312870485|ref|ZP_07730604.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3]
 gi|311093947|gb|EFQ52272.1| 30S ribosomal protein S13 [Lactobacillus oris PB013-T2-3]
          Length = 121

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15603258|ref|NP_246332.1| 30S ribosomal protein S13 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|32363393|sp|Q9CL51|RS13_PASMU RecName: Full=30S ribosomal protein S13
 gi|12721768|gb|AAK03477.1| RpS13 [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 118

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRAQAICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|326332224|ref|ZP_08198504.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1]
 gi|325949930|gb|EGD41990.1| 30S ribosomal protein S13 [Nocardioidaceae bacterium Broad-1]
          Length = 125

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI+GIG  +SQ +     + P  RVH L E E++++R  I
Sbjct: 1   MARLQGVDLPRDKRVEIALTYIYGIGRTTSQKLLEATGVNPNTRVHALAEDELVKLRDEI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E Q  Q EGDLRR V  +I+R +++G Y+G RHR+GLPVRGQRT TNARTRK   +    
Sbjct: 61  EAQGIQTEGDLRREVQADIRRKIEIGSYQGRRHRQGLPVRGQRTKTNARTRKGPKRTVAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|150003365|ref|YP_001298109.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482]
 gi|254881346|ref|ZP_05254056.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA]
 gi|294777843|ref|ZP_06743287.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510]
 gi|319640347|ref|ZP_07995072.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A]
 gi|158706336|sp|A6KYH3|RS13_BACV8 RecName: Full=30S ribosomal protein S13
 gi|149931789|gb|ABR38487.1| 30S ribosomal protein S13 [Bacteroides vulgatus ATCC 8482]
 gi|254834139|gb|EET14448.1| 30S ribosomal protein S13 [Bacteroides sp. 4_3_47FAA]
 gi|294448297|gb|EFG16853.1| 30S ribosomal protein S13 [Bacteroides vulgatus PC510]
 gi|317388122|gb|EFV68976.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_40A]
          Length = 126

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|116624177|ref|YP_826333.1| 30S ribosomal protein S13 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122253107|sp|Q01WB7|RS13_SOLUE RecName: Full=30S ribosomal protein S13
 gi|116227339|gb|ABJ86048.1| SSU ribosomal protein S13P [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 128

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P  KR    L YI+GIG   S+ + ++  I  ++++  L E E+ ++R  +
Sbjct: 1   MARLAGVDLPPGKRAEIGLTYIYGIGRTRSKSLLHRAGIDFDKKIRDLTEDEINKVRTIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++  VEGDLR+ ++MNIKR +++G YRGLRHRR LPVRGQRTHTNARTRK   +G VA 
Sbjct: 61  EEEGAVEGDLRKEISMNIKRHIEMGSYRGLRHRRSLPVRGQRTHTNARTRKGPRRGTVAN 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|170017921|ref|YP_001728840.1| ribosomal protein S13 [Leuconostoc citreum KM20]
 gi|226712757|sp|B1MVZ2|RS13_LEUCK RecName: Full=30S ribosomal protein S13
 gi|169804778|gb|ACA83396.1| Ribosomal protein S13 [Leuconostoc citreum KM20]
          Length = 123

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q I  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKILAEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|302337499|ref|YP_003802705.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
 gi|301634684|gb|ADK80111.1| 30S ribosomal protein S13 [Spirochaeta smaragdinae DSM 11293]
          Length = 121

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P  K    +L YI+GIG  S+ +IC K  I P+ +++ L   +V ++R  I
Sbjct: 1   MARIAGIDLP-NKATKISLTYIYGIGRSSAMEICKKAGIDPDSKMNDLSAEDVNKLRTLI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + DY VEG LR  +A+NIKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK 
Sbjct: 60  DSDYTVEGRLRTQIALNIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKG 111


>gi|296272959|ref|YP_003655590.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299]
 gi|296097133|gb|ADG93083.1| 30S ribosomal protein S13 [Arcobacter nitrofigilis DSM 7299]
          Length = 120

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/119 (57%), Positives = 85/119 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI GIG  +S+ I +   I  ++R H+L E E   IR  I
Sbjct: 1   MARIAGVDLPNKKRMEYALTYIFGIGLYNSRLILDATGISYDKRAHELTEDEAAAIRLEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +++YQVEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK   +   A
Sbjct: 61  QKNYQVEGDLRKKVAMDIKSLMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKRTVGA 119


>gi|167564393|ref|ZP_02357309.1| 30S ribosomal protein S13 [Burkholderia oklahomensis EO147]
 gi|167571540|ref|ZP_02364414.1| 30S ribosomal protein S13 [Burkholderia oklahomensis C6786]
          Length = 121

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICAASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116617352|ref|YP_817723.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431318|ref|ZP_03913371.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122272447|sp|Q03ZM2|RS13_LEUMM RecName: Full=30S ribosomal protein S13
 gi|116096199|gb|ABJ61350.1| SSU ribosomal protein S13P [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352911|gb|EEJ43084.1| 30S ribosomal protein S13 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 123

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/123 (45%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLAEAGVSEDVRVRDLTSDQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKSLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|310941691|dbj|BAJ24199.1| 30S ribosomal protein S13 [Pseudomonas alcaligenes]
          Length = 118

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAAKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-LTTEGDLRREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|189501630|ref|YP_001957347.1| 30S ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
 gi|226712687|sp|B3EUJ9|RS13_AMOA5 RecName: Full=30S ribosomal protein S13
 gi|189497071|gb|ACE05618.1| ribosomal protein S13 [Candidatus Amoebophilus asiaticus 5a2]
          Length = 126

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/118 (49%), Positives = 73/118 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KR   AL YI GIG  S+  I     +  ++RV    + E   IR  I
Sbjct: 1   MARILGVDIPDNKRGEIALTYIFGIGRSSANQILAAAGVNKDKRVSSWTDEESQTIRTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            ++Y+VEG+L+  + +NIKRL+D+GCYRG RH  GLPVRGQ T  NARTRK   K   
Sbjct: 61  NENYKVEGELKSEIRLNIKRLVDIGCYRGRRHVLGLPVRGQSTKNNARTRKGKRKTVA 118


>gi|303234802|ref|ZP_07321428.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4]
 gi|302494143|gb|EFL53923.1| 30S ribosomal protein S13 [Finegoldia magna BVS033A4]
          Length = 116

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK   K
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPKK 114


>gi|313889578|ref|ZP_07823223.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122087|gb|EFR45181.1| 30S ribosomal protein S13 [Streptococcus pseudoporcinus SPIN 20026]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +SQ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKPTAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|297588216|ref|ZP_06946860.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516]
 gi|297574905|gb|EFH93625.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 53516]
          Length = 116

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRTEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK   K
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPRK 114


>gi|83648830|ref|YP_437265.1| 30S ribosomal protein S13 [Hahella chejuensis KCTC 2396]
 gi|123530605|sp|Q2S934|RS13_HAHCH RecName: Full=30S ribosomal protein S13
 gi|83636873|gb|ABC32840.1| Ribosomal protein S13 [Hahella chejuensis KCTC 2396]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    +L YI+GIG  +S+ +C +  I P+ +V  L E ++  +R  I
Sbjct: 1   MARIAGVNIPDNKHTEVSLTYIYGIGRTTSRGLCERTGISPQAKVKDLSEEQLDVLRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V MNIKRL DLGCYRGLRHR  LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-MVVEGDLRREVQMNIKRLKDLGCYRGLRHRHSLPVRGQRTKTNARTRKGPRKPI 116


>gi|70725827|ref|YP_252741.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435]
 gi|82581615|sp|Q4L890|RS13_STAHJ RecName: Full=30S ribosomal protein S13
 gi|68446551|dbj|BAE04135.1| 30S ribosomal protein S13 [Staphylococcus haemolyticus JCSC1435]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  +++ I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTAKKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  DS-YKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|330953175|gb|EGH53435.1| 30S ribosomal protein S13 [Pseudomonas syringae Cit 7]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC    + P  ++  L + ++ Q+R  +
Sbjct: 1   MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICATTGVNPAVKIKDLSDEQIEQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDL R + M IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTTEGDLGREINMKIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|27468717|ref|NP_765354.1| 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228]
 gi|57867677|ref|YP_189370.1| 30S ribosomal protein S13 [Staphylococcus epidermidis RP62A]
 gi|242243971|ref|ZP_04798414.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144]
 gi|251812071|ref|ZP_04826544.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875366|ref|ZP_06284239.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135]
 gi|293368457|ref|ZP_06615081.1| ribosomal protein S13/S18 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32363310|sp|Q8CRI3|RS13_STAES RecName: Full=30S ribosomal protein S13
 gi|81673639|sp|Q5HM23|RS13_STAEQ RecName: Full=30S ribosomal protein S13
 gi|27316265|gb|AAO05440.1|AE016750_45 30S ribosomal protein S13 [Staphylococcus epidermidis ATCC 12228]
 gi|57638335|gb|AAW55123.1| ribosomal protein S13/S18 [Staphylococcus epidermidis RP62A]
 gi|242232604|gb|EES34916.1| 30S ribosomal protein S13 [Staphylococcus epidermidis W23144]
 gi|251804405|gb|EES57062.1| 30S ribosomal protein S13 [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296131|gb|EFA88652.1| 30S ribosomal protein S13 [Staphylococcus epidermidis SK135]
 gi|291317415|gb|EFE57837.1| ribosomal protein S13/S18 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|319400601|gb|EFV88826.1| 30S ribosomal protein S13 [Staphylococcus epidermidis FRI909]
 gi|329731229|gb|EGG67599.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU144]
 gi|329736494|gb|EGG72762.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU028]
 gi|329737063|gb|EGG73318.1| 30S ribosomal protein S13 [Staphylococcus epidermidis VCU045]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L Y++GIG  ++  I  +  +  + RV  L + E+ +IR+ +
Sbjct: 1   MARIAGVDIPREKRIVISLTYVYGIGTSTANKIVEEANVSADTRVKDLTDDELGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR   +NIKRLM++  YRG+RHRRGLPVRGQ+T  NARTRK   K    +
Sbjct: 61  D-GYKVEGDLRREQNLNIKRLMEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300721388|ref|YP_003710659.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC
           19061]
 gi|297627876|emb|CBJ88422.1| 30S ribosomal subunit protein S13 [Xenorhabdus nematophila ATCC
           19061]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAENVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|56477616|ref|YP_159205.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1]
 gi|81357336|sp|Q5P310|RS13_AZOSE RecName: Full=30S ribosomal protein S13
 gi|56313659|emb|CAI08304.1| 30S ribosomal protein S13 [Aromatoleum aromaticum EbN1]
          Length = 120

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +Q IC+   +    ++  L ES++ ++R  +
Sbjct: 1   MARIAGVNIPNHKHAEIALTAIYGIGRSRAQKICDAANVVRSVKMKDLTESDMERLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K    +
Sbjct: 61  AK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRRGLPLRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|311693292|gb|ADP96165.1| ribosomal protein S13, bacterial-type [marine bacterium HP15]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHAVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLSDEQLEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-VSVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116


>gi|152964682|ref|YP_001360466.1| 30S ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
 gi|189044279|sp|A6W5W3|RS13_KINRD RecName: Full=30S ribosomal protein S13
 gi|151359199|gb|ABS02202.1| ribosomal protein S13 [Kineococcus radiotolerans SRS30216]
          Length = 126

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +++      + P+ RV  L + +++ +R  I
Sbjct: 1   MARLVGVDLPREKRLEIALTYIFGVGRTRAKETLAATGVSPDLRVRDLSDDDLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYRVEGDLRREVAADIRRKVEIGTYQGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238921421|ref|YP_002934936.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146]
 gi|269140551|ref|YP_003297252.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202]
 gi|259494675|sp|C5BF29|RS13_EDWI9 RecName: Full=30S ribosomal protein S13
 gi|238870990|gb|ACR70701.1| 30S ribosomal protein S13 (BS14) [Edwardsiella ictaluri 93-146]
 gi|267986212|gb|ACY86041.1| 30S ribosomal protein S13 [Edwardsiella tarda EIB202]
 gi|304560337|gb|ADM43001.1| SSU ribosomal protein S13p (S18e) [Edwardsiella tarda FL6-60]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICAAAGIAENVKISELSEEQIETLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMD+GCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVTLSIKRLMDIGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|146329476|ref|YP_001210130.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A]
 gi|158706228|sp|A5EX97|RS13_DICNV RecName: Full=30S ribosomal protein S13
 gi|146232946|gb|ABQ13924.1| 30S ribosomal protein S13 [Dichelobacter nodosus VCS1703A]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 87/117 (74%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   +++IC K  + P++++  L +SEV  +RQ +
Sbjct: 1   MARIAGINVPTQKHAVIALTSIYGIGTSRAKEICAKANVAPDKKIRDLSDSEVEALRQVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + YQVEGDLRR V+M+IKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK   +  
Sbjct: 61  SE-YQVEGDLRRQVSMDIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRKGPRRPI 116


>gi|194466929|ref|ZP_03072916.1| ribosomal protein S13 [Lactobacillus reuteri 100-23]
 gi|194453965|gb|EDX42862.1| ribosomal protein S13 [Lactobacillus reuteri 100-23]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|329956726|ref|ZP_08297299.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056]
 gi|328524098|gb|EGF51174.1| 30S ribosomal protein S13 [Bacteroides clarus YIT 12056]
          Length = 126

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|169823876|ref|YP_001691487.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328]
 gi|226712738|sp|B0RZT3|RS13_FINM2 RecName: Full=30S ribosomal protein S13
 gi|167830681|dbj|BAG07597.1| 30S ribosomal protein S13 [Finegoldia magna ATCC 29328]
          Length = 116

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/115 (57%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KRV   L  I+GIG +SS  I  KL I P+ RV  L ESE+  IR  +
Sbjct: 1   MARIQGVDLPNDKRVEIGLTAIYGIGRQSSNKILAKLGINPDTRVKDLTESELSDIRNEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + +Y  EGDLRR VAMNIKRL ++ CYRG RH++GLPVRGQ T  NARTRK   K
Sbjct: 61  D-NYLTEGDLRRDVAMNIKRLKEINCYRGSRHKKGLPVRGQHTKNNARTRKGPRK 114


>gi|116873974|ref|YP_850755.1| 30S ribosomal protein S13 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123464194|sp|A0ALU4|RS13_LISW6 RecName: Full=30S ribosomal protein S13
 gi|116742852|emb|CAK21976.1| ribosomal protein S13 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++ ++  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASEVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|293375414|ref|ZP_06621695.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909]
 gi|325844404|ref|ZP_08168131.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1]
 gi|292645967|gb|EFF63996.1| 30S ribosomal protein S13 [Turicibacter sanguinis PC909]
 gi|325489078|gb|EGC91462.1| 30S ribosomal protein S13 [Turicibacter sp. HGF1]
          Length = 121

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  ++Q I     +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGIDIPRDKRVVISLTYIYGIGKPTAQQILAAAGVSEDTRVRDLTEDELNRIRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRLM++  +RG+RHRR LPVRGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREISLNIKRLMEIASFRGVRHRRSLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|197104718|ref|YP_002130095.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1]
 gi|196478138|gb|ACG77666.1| ribosomal protein S13 [Phenylobacterium zucineum HLK1]
          Length = 129

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 81/121 (66%), Positives = 95/121 (78%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  KRVV AL YIHGIG   +++I NK+ I   RRV+QL + EV+QIR+ I+
Sbjct: 9   ARIAGVNIPTNKRVVIALQYIHGIGAAKAREIVNKVGIEDARRVNQLTDQEVLQIRETID 68

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +DY VEGDLRR  A+NIKRLMDL CYRGLRHR+GLPVRGQRTHTNARTRK   K    +K
Sbjct: 69  RDYMVEGDLRRDTAVNIKRLMDLACYRGLRHRKGLPVRGQRTHTNARTRKGPAKPIAGKK 128

Query: 122 R 122
           +
Sbjct: 129 K 129


>gi|290477171|ref|YP_003470086.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004]
 gi|289176519|emb|CBJ83328.1| 30S ribosomal subunit protein S13 [Xenorhabdus bovienii SS-2004]
          Length = 118

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQQICEAACIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|116327248|ref|YP_796968.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116327288|ref|YP_797008.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116332098|ref|YP_801816.1| 30S ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280172|sp|Q04PW2|RS13_LEPBJ RecName: Full=30S ribosomal protein S13
 gi|122284905|sp|Q055C0|RS13_LEPBL RecName: Full=30S ribosomal protein S13
 gi|116119992|gb|ABJ78035.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120032|gb|ABJ78075.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125787|gb|ABJ77058.1| 30S Ribosomal protein S13 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 125

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+A+
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSRVILKKAGIDESIRVKDLNESQEAAIRKAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EESAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|238025955|ref|YP_002910186.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1]
 gi|237875149|gb|ACR27482.1| 30S ribosomal protein S13 [Burkholderia glumae BGR1]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVDFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|124514419|gb|EAY55932.1| ribosomal protein S13 [Leptospirillum rubarum]
          Length = 124

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/110 (61%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KRV  AL YI+GIG  +S  I     I P RRV  L + EV  +R+ I
Sbjct: 1   MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEVASLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+ Y VEGDLRR V  NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR
Sbjct: 61  EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110


>gi|309812450|ref|ZP_07706205.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185]
 gi|308433755|gb|EFP57632.1| 30S ribosomal protein S13 [Dermacoccus sp. Ellin185]
          Length = 124

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV   L YI G+G   +Q+      + P+ RV  L E E++++R  +
Sbjct: 1   MARLIGVDLPREKRVEVGLTYIFGVGRTRAQETLAATGVNPDTRVRDLTEEELVKLRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  +++EGDLRR +A +I+R +++G Y GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EASFRLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|16801818|ref|NP_472086.1| 30S ribosomal protein S13 [Listeria innocua Clip11262]
 gi|16804646|ref|NP_466131.1| 30S ribosomal protein S13 [Listeria monocytogenes EGD-e]
 gi|46908780|ref|YP_015169.1| 30S ribosomal protein S13 [Listeria monocytogenes str. 4b F2365]
 gi|47093974|ref|ZP_00231708.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858]
 gi|47097179|ref|ZP_00234744.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854]
 gi|217966193|ref|YP_002351871.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23]
 gi|224499281|ref|ZP_03667630.1| 30S ribosomal protein S13 [Listeria monocytogenes Finland 1988]
 gi|224503598|ref|ZP_03671905.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL R2-561]
 gi|226225154|ref|YP_002759261.1| ribosomal protein S13 [Listeria monocytogenes Clip81459]
 gi|254825031|ref|ZP_05230032.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194]
 gi|254829057|ref|ZP_05233744.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165]
 gi|254830961|ref|ZP_05235616.1| 30S ribosomal protein S13 [Listeria monocytogenes 10403S]
 gi|254854187|ref|ZP_05243535.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503]
 gi|254899941|ref|ZP_05259865.1| 30S ribosomal protein S13 [Listeria monocytogenes J0161]
 gi|254912853|ref|ZP_05262865.1| ribosomal protein S13 [Listeria monocytogenes J2818]
 gi|254931122|ref|ZP_05264481.1| ribosomal protein S13 [Listeria monocytogenes HPB2262]
 gi|254937233|ref|ZP_05268930.1| ribosomal protein S13 [Listeria monocytogenes F6900]
 gi|254992728|ref|ZP_05274918.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-064]
 gi|255027533|ref|ZP_05299519.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J2-003]
 gi|255028409|ref|ZP_05300360.1| 30S ribosomal protein S13 [Listeria monocytogenes LO28]
 gi|255520567|ref|ZP_05387804.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-175]
 gi|284800506|ref|YP_003412371.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578]
 gi|284993692|ref|YP_003415460.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923]
 gi|290891793|ref|ZP_06554790.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071]
 gi|300763641|ref|ZP_07073639.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017]
 gi|315283815|ref|ZP_07871884.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120]
 gi|54039349|sp|P66384|RS13_LISIN RecName: Full=30S ribosomal protein S13
 gi|54042121|sp|P66383|RS13_LISMO RecName: Full=30S ribosomal protein S13
 gi|67461446|sp|Q71WH0|RS13_LISMF RecName: Full=30S ribosomal protein S13
 gi|254811152|sp|B8DB32|RS13_LISMH RecName: Full=30S ribosomal protein S13
 gi|259494684|sp|C1KZF7|RS13_LISMC RecName: Full=30S ribosomal protein S13
 gi|16412096|emb|CAD00686.1| ribosomal protein S13 [Listeria monocytogenes EGD-e]
 gi|16415293|emb|CAC97983.1| ribosomal protein S13 [Listeria innocua Clip11262]
 gi|46882053|gb|AAT05346.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47014438|gb|EAL05406.1| ribosomal protein S13 [Listeria monocytogenes str. 1/2a F6854]
 gi|47017635|gb|EAL08434.1| ribosomal protein S13 [Listeria monocytogenes str. 4b H7858]
 gi|217335463|gb|ACK41257.1| ribosomal protein S13p/S18e [Listeria monocytogenes HCC23]
 gi|225877616|emb|CAS06330.1| ribosomal protein S13 [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258601466|gb|EEW14791.1| ribosomal protein S13 [Listeria monocytogenes FSL N3-165]
 gi|258607579|gb|EEW20187.1| ribosomal protein S13 [Listeria monocytogenes FSL R2-503]
 gi|258609838|gb|EEW22446.1| ribosomal protein S13 [Listeria monocytogenes F6900]
 gi|284056068|gb|ADB67009.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5578]
 gi|284059159|gb|ADB70098.1| 30S ribosomal protein S13 [Listeria monocytogenes 08-5923]
 gi|290558387|gb|EFD91904.1| ribosomal protein S13 [Listeria monocytogenes FSL J2-071]
 gi|293582670|gb|EFF94702.1| ribosomal protein S13 [Listeria monocytogenes HPB2262]
 gi|293590851|gb|EFF99185.1| ribosomal protein S13 [Listeria monocytogenes J2818]
 gi|293594273|gb|EFG02034.1| ribosomal protein S13 [Listeria monocytogenes FSL J1-194]
 gi|300515918|gb|EFK42967.1| ribosomal protein S13 [Listeria monocytogenes FSL N1-017]
 gi|307572197|emb|CAR85376.1| rpsM [Listeria monocytogenes L99]
 gi|313606575|gb|EFR83376.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-208]
 gi|313612542|gb|EFR86615.1| 30S ribosomal protein S13 [Listeria marthii FSL S4-120]
 gi|313616944|gb|EFR89579.1| 30S ribosomal protein S13 [Listeria innocua FSL S4-378]
 gi|313622248|gb|EFR92761.1| 30S ribosomal protein S13 [Listeria innocua FSL J1-023]
 gi|328468092|gb|EGF39098.1| 30S ribosomal protein S13 [Listeria monocytogenes 1816]
 gi|328469780|gb|EGF40697.1| 30S ribosomal protein S13 [Listeria monocytogenes 220]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG ++++++  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261880858|ref|ZP_06007285.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361]
 gi|270332365|gb|EFA43151.1| 30S ribosomal protein S13 [Prevotella bergensis DSM 17361]
          Length = 126

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 84/123 (68%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V++  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWSDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +++VEGDLR  V M+IKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEFKVEGDLRSEVQMSIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|259502554|ref|ZP_05745456.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041]
 gi|259169506|gb|EEW54001.1| 30S ribosomal protein S13 [Lactobacillus antri DSM 16041]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVVGLTYIYGIGDSTAKKILEAAGVSEDVRVRDLTPDQEEKIRGQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E + QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  E-NIQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVTIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|188996214|ref|YP_001930465.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931281|gb|ACD65911.1| ribosomal protein S13 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 116

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/115 (57%), Positives = 86/115 (74%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG   +++I  K  I   +RV +L   E+  IR+ I
Sbjct: 1   MARIAGVDLPDRKRLEIALTYIYGIGKTRAKEILEKTGIDGMKRVGELTPDELNTIRRFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           EQ+Y+VEGDLRR V++ IKRL+D+GCYRG+RHR GLPVRGQRT TNA+TR+   K
Sbjct: 61  EQNYKVEGDLRREVSLAIKRLVDMGCYRGIRHRLGLPVRGQRTKTNAKTRRGKRK 115


>gi|297537553|ref|YP_003673322.1| 30S ribosomal protein S13 [Methylotenera sp. 301]
 gi|297256900|gb|ADI28745.1| 30S ribosomal protein S13 [Methylotenera sp. 301]
          Length = 120

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I GIG  ++Q IC    +    ++  L +++V ++R  +
Sbjct: 1   MARIAGVNIPNNKHADVALTAIFGIGRVTAQKICAAAGVLATTKMKDLNDADVDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   K     
Sbjct: 61  AKE-KVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPVRGQRTKTNARTRKGPVKAIKQA 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|322374069|ref|ZP_08048603.1| 30S ribosomal protein S13 [Streptococcus sp. C150]
 gi|321277035|gb|EFX54106.1| 30S ribosomal protein S13 [Streptococcus sp. C150]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLTTSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|323340397|ref|ZP_08080654.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644]
 gi|323092173|gb|EFZ34788.1| 30S ribosomal protein S13 [Lactobacillus ruminis ATCC 25644]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  +++ I  +  +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGDTTAKKILAEAGVSEDVRVRDLTSDQEDKIRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y+VEGDLRR V++NIKRL ++G YRGLRHRR LP RGQ T  NART K        +
Sbjct: 61  D-NYKVEGDLRREVSLNIKRLSEIGSYRGLRHRRHLPSRGQNTKNNARTCKGPKVTIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|313206372|ref|YP_004045549.1| SSU ribosomal protein s13p [Riemerella anatipestifer DSM 15868]
 gi|312445688|gb|ADQ82043.1| SSU ribosomal protein S13P [Riemerella anatipestifer DSM 15868]
 gi|315023687|gb|EFT36691.1| SSU ribosomal protein S13p (S18e) [Riemerella anatipestifer RA-YM]
 gi|325336182|gb|ADZ12456.1| Ribosomal protein S13 [Riemerella anatipestifer RA-GD]
          Length = 125

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI+GIG  ++ +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIYGIGKSTASEILKNAGISEDKKVNEWNDDELAAIRNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SENIKVEGELRSEVQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|160888375|ref|ZP_02069378.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492]
 gi|167764349|ref|ZP_02436474.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC
           43183]
 gi|218131303|ref|ZP_03460107.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697]
 gi|270294728|ref|ZP_06200929.1| 30S ribosomal protein S13 [Bacteroides sp. D20]
 gi|317476333|ref|ZP_07935582.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA]
 gi|317477728|ref|ZP_07936921.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36]
 gi|156862052|gb|EDO55483.1| hypothetical protein BACUNI_00788 [Bacteroides uniformis ATCC 8492]
 gi|167697754|gb|EDS14333.1| hypothetical protein BACSTE_02733 [Bacteroides stercoris ATCC
           43183]
 gi|217986520|gb|EEC52856.1| hypothetical protein BACEGG_02914 [Bacteroides eggerthii DSM 20697]
 gi|270273975|gb|EFA19836.1| 30S ribosomal protein S13 [Bacteroides sp. D20]
 gi|316906073|gb|EFV27834.1| 30S ribosomal protein S13 [Bacteroides sp. 4_1_36]
 gi|316907359|gb|EFV29064.1| 30S ribosomal protein S13 [Bacteroides eggerthii 1_2_48FAA]
          Length = 126

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDRDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|309799082|ref|ZP_07693335.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302]
 gi|308117317|gb|EFO54740.1| ribosomal protein S13p/S18e [Streptococcus infantis SK1302]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGISEDVRVRDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|145588264|ref|YP_001154861.1| 30S ribosomal protein S13 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189044286|sp|A4SUY3|RS13_POLSQ RecName: Full=30S ribosomal protein S13
 gi|145046670|gb|ABP33297.1| SSU ribosomal protein S13P [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I GIG   +  IC    +  +++V  L ++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIFGIGTTRANKICQTTGVAIDKKVKDLTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V M+IKRLMDLGCYRG+RHR+GLPVRGQRT TNARTRK   K GV  
Sbjct: 61  GK-FITEGDLRREVTMSIKRLMDLGCYRGVRHRKGLPVRGQRTKTNARTRKGPRKSGVQL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15674311|ref|NP_268484.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS]
 gi|19745265|ref|NP_606401.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232]
 gi|21909600|ref|NP_663868.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315]
 gi|28894978|ref|NP_801328.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1]
 gi|50913463|ref|YP_059435.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10394]
 gi|71902733|ref|YP_279536.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS6180]
 gi|71909882|ref|YP_281432.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS5005]
 gi|94987699|ref|YP_595800.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS9429]
 gi|94989580|ref|YP_597680.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10270]
 gi|94991568|ref|YP_599667.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS2096]
 gi|94993468|ref|YP_601566.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS10750]
 gi|139472951|ref|YP_001127666.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo]
 gi|209558651|ref|YP_002285123.1| 30S ribosomal protein S13 [Streptococcus pyogenes NZ131]
 gi|306828237|ref|ZP_07461497.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782]
 gi|54039355|sp|P66395|RS13_STRP3 RecName: Full=30S ribosomal protein S13
 gi|54039356|sp|P66396|RS13_STRP8 RecName: Full=30S ribosomal protein S13
 gi|54042126|sp|P66394|RS13_STRP1 RecName: Full=30S ribosomal protein S13
 gi|73917915|sp|Q5XEB1|RS13_STRP6 RecName: Full=30S ribosomal protein S13
 gi|91207628|sp|Q48VS5|RS13_STRPM RecName: Full=30S ribosomal protein S13
 gi|158706280|sp|Q1JE35|RS13_STRPB RecName: Full=30S ribosomal protein S13
 gi|158706281|sp|Q1JNZ3|RS13_STRPC RecName: Full=30S ribosomal protein S13
 gi|158706282|sp|Q1JJ37|RS13_STRPD RecName: Full=30S ribosomal protein S13
 gi|158706283|sp|Q1J8Y9|RS13_STRPF RecName: Full=30S ribosomal protein S13
 gi|158706284|sp|A2RC38|RS13_STRPG RecName: Full=30S ribosomal protein S13
 gi|226712793|sp|B5XJ60|RS13_STRPZ RecName: Full=30S ribosomal protein S13
 gi|13621392|gb|AAK33206.1| 30S ribosomal protein S13 [Streptococcus pyogenes M1 GAS]
 gi|19747360|gb|AAL96900.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS8232]
 gi|21903781|gb|AAM78671.1| 30S ribosomal protein S13 [Streptococcus pyogenes MGAS315]
 gi|28810223|dbj|BAC63161.1| 30S ribosomal protein S13 [Streptococcus pyogenes SSI-1]
 gi|50902537|gb|AAT86252.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10394]
 gi|71801828|gb|AAX71181.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS6180]
 gi|71852664|gb|AAZ50687.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS5005]
 gi|94541207|gb|ABF31256.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS9429]
 gi|94543088|gb|ABF33136.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10270]
 gi|94545076|gb|ABF35123.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS2096]
 gi|94546976|gb|ABF37022.1| SSU ribosomal protein S13P [Streptococcus pyogenes MGAS10750]
 gi|134271197|emb|CAM29410.1| 30S ribosomal protein S13 [Streptococcus pyogenes str. Manfredo]
 gi|209539852|gb|ACI60428.1| SSU ribosomal protein S13p (S18e) [Streptococcus pyogenes NZ131]
 gi|304429548|gb|EFM32597.1| 30S ribosomal protein S13 [Streptococcus pyogenes ATCC 10782]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|329962290|ref|ZP_08300296.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057]
 gi|328530398|gb|EGF57275.1| 30S ribosomal protein S13 [Bacteroides fluxus YIT 12057]
          Length = 126

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I  K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILEKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|222152289|ref|YP_002561464.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J]
 gi|254811169|sp|B9DSX4|RS13_STRU0 RecName: Full=30S ribosomal protein S13
 gi|222113100|emb|CAR40482.1| 30S ribosomal protein S13 [Streptococcus uberis 0140J]
          Length = 121

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKATAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|170748612|ref|YP_001754872.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831]
 gi|226712762|sp|B1LWQ2|RS13_METRJ RecName: Full=30S ribosomal protein S13
 gi|170655134|gb|ACB24189.1| ribosomal protein S13 [Methylobacterium radiotolerans JCM 2831]
          Length = 122

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 84/122 (68%), Positives = 99/122 (81%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVV AL YIHGIG K +++I  K+ IP ERRV+QL ++EV+QIR+ I
Sbjct: 1   MARIAGVNIPTNKRVVIALQYIHGIGAKKAEEITQKVNIPAERRVNQLTDAEVLQIRETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR V+MNIKRLMDLG YRGLRHR+ LPVRGQRTHTNARTRK   K    +
Sbjct: 61  DRDYLVEGDLRREVSMNIKRLMDLGAYRGLRHRKQLPVRGQRTHTNARTRKGKAKPIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|148544672|ref|YP_001272042.1| 30S ribosomal protein S13 [Lactobacillus reuteri DSM 20016]
 gi|184154025|ref|YP_001842366.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112]
 gi|227363795|ref|ZP_03847902.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3]
 gi|325683006|ref|ZP_08162522.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A]
 gi|166991600|sp|A5VLI1|RS13_LACRD RecName: Full=30S ribosomal protein S13
 gi|226712753|sp|B2G8V4|RS13_LACRJ RecName: Full=30S ribosomal protein S13
 gi|148531706|gb|ABQ83705.1| SSU ribosomal protein S13P [Lactobacillus reuteri DSM 20016]
 gi|183225369|dbj|BAG25886.1| 30S ribosomal protein S13 [Lactobacillus reuteri JCM 1112]
 gi|227071152|gb|EEI09468.1| ribosomal protein S13 [Lactobacillus reuteri MM2-3]
 gi|324977356|gb|EGC14307.1| 30S ribosomal protein S13 [Lactobacillus reuteri MM4-1A]
          Length = 121

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|29374875|ref|NP_814028.1| 30S ribosomal protein S13 [Enterococcus faecalis V583]
 gi|227520016|ref|ZP_03950065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104]
 gi|227555877|ref|ZP_03985924.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22]
 gi|229546940|ref|ZP_04435665.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322]
 gi|229550529|ref|ZP_04439254.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200]
 gi|255971733|ref|ZP_05422319.1| ribosomal protein S13 [Enterococcus faecalis T1]
 gi|255974733|ref|ZP_05425319.1| ribosomal protein S13 [Enterococcus faecalis T2]
 gi|256618356|ref|ZP_05475202.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200]
 gi|256762028|ref|ZP_05502608.1| ribosomal protein S13 [Enterococcus faecalis T3]
 gi|256855187|ref|ZP_05560548.1| ribosomal protein S13 [Enterococcus faecalis T8]
 gi|256956838|ref|ZP_05561009.1| ribosomal protein S13 [Enterococcus faecalis DS5]
 gi|256960645|ref|ZP_05564816.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96]
 gi|256964156|ref|ZP_05568327.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704]
 gi|257078508|ref|ZP_05572869.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1]
 gi|257081521|ref|ZP_05575882.1| ribosomal protein S13 [Enterococcus faecalis E1Sol]
 gi|257084169|ref|ZP_05578530.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1]
 gi|257087996|ref|ZP_05582357.1| ribosomal protein S13 [Enterococcus faecalis D6]
 gi|257088673|ref|ZP_05583034.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188]
 gi|257417599|ref|ZP_05594593.1| ribosomal protein S13 [Enterococcus faecalis AR01/DG]
 gi|257418675|ref|ZP_05595669.1| 30S ribosomal protein S13 [Enterococcus faecalis T11]
 gi|257421523|ref|ZP_05598513.1| 30S ribosomal protein S13 [Enterococcus faecalis X98]
 gi|293382734|ref|ZP_06628659.1| 30S ribosomal protein S13 [Enterococcus faecalis R712]
 gi|293388083|ref|ZP_06632611.1| 30S ribosomal protein S13 [Enterococcus faecalis S613]
 gi|294781075|ref|ZP_06746426.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1]
 gi|300862068|ref|ZP_07108148.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11]
 gi|307269111|ref|ZP_07550472.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248]
 gi|307274195|ref|ZP_07555403.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855]
 gi|307276420|ref|ZP_07557543.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134]
 gi|307278630|ref|ZP_07559700.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860]
 gi|307286990|ref|ZP_07567065.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109]
 gi|307291669|ref|ZP_07571544.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411]
 gi|312901098|ref|ZP_07760386.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470]
 gi|312904660|ref|ZP_07763815.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635]
 gi|312908629|ref|ZP_07767571.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512]
 gi|312909223|ref|ZP_07768080.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516]
 gi|312952631|ref|ZP_07771495.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102]
 gi|32363226|sp|P59754|RS13_ENTFA RecName: Full=30S ribosomal protein S13
 gi|29342333|gb|AAO80099.1| ribosomal protein S13 [Enterococcus faecalis V583]
 gi|227072564|gb|EEI10527.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0104]
 gi|227175044|gb|EEI56016.1| 30S ribosomal protein S13 [Enterococcus faecalis HH22]
 gi|229304248|gb|EEN70244.1| 30S ribosomal protein S13 [Enterococcus faecalis ATCC 29200]
 gi|229307868|gb|EEN73855.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1322]
 gi|255962751|gb|EET95227.1| ribosomal protein S13 [Enterococcus faecalis T1]
 gi|255967605|gb|EET98227.1| ribosomal protein S13 [Enterococcus faecalis T2]
 gi|256597883|gb|EEU17059.1| ribosomal protein S13 [Enterococcus faecalis ATCC 4200]
 gi|256683279|gb|EEU22974.1| ribosomal protein S13 [Enterococcus faecalis T3]
 gi|256709700|gb|EEU24747.1| ribosomal protein S13 [Enterococcus faecalis T8]
 gi|256947334|gb|EEU63966.1| ribosomal protein S13 [Enterococcus faecalis DS5]
 gi|256951141|gb|EEU67773.1| 30S ribosomal protein S13 [Enterococcus faecalis Merz96]
 gi|256954652|gb|EEU71284.1| 30S ribosomal protein S13 [Enterococcus faecalis HIP11704]
 gi|256986538|gb|EEU73840.1| 30S ribosomal protein S13 [Enterococcus faecalis JH1]
 gi|256989551|gb|EEU76853.1| ribosomal protein S13 [Enterococcus faecalis E1Sol]
 gi|256992199|gb|EEU79501.1| 30S ribosomal protein S13 [Enterococcus faecalis Fly1]
 gi|256996026|gb|EEU83328.1| ribosomal protein S13 [Enterococcus faecalis D6]
 gi|256997485|gb|EEU84005.1| 30S ribosomal protein S13 [Enterococcus faecalis CH188]
 gi|257159427|gb|EEU89387.1| ribosomal protein S13 [Enterococcus faecalis ARO1/DG]
 gi|257160503|gb|EEU90463.1| 30S ribosomal protein S13 [Enterococcus faecalis T11]
 gi|257163347|gb|EEU93307.1| 30S ribosomal protein S13 [Enterococcus faecalis X98]
 gi|291079894|gb|EFE17258.1| 30S ribosomal protein S13 [Enterococcus faecalis R712]
 gi|291082534|gb|EFE19497.1| 30S ribosomal protein S13 [Enterococcus faecalis S613]
 gi|294451878|gb|EFG20329.1| 30S ribosomal protein S13 [Enterococcus faecalis PC1.1]
 gi|295112522|emb|CBL31159.1| SSU ribosomal protein S13P [Enterococcus sp. 7L76]
 gi|300848593|gb|EFK76350.1| 30S ribosomal protein S13 [Enterococcus faecalis TUSoD Ef11]
 gi|306497288|gb|EFM66830.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0411]
 gi|306501936|gb|EFM71225.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0109]
 gi|306504690|gb|EFM73890.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0860]
 gi|306506900|gb|EFM76047.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2134]
 gi|306509157|gb|EFM78219.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0855]
 gi|306514591|gb|EFM83145.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4248]
 gi|310625416|gb|EFQ08699.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 512]
 gi|310629419|gb|EFQ12702.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0102]
 gi|310632012|gb|EFQ15295.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0635]
 gi|311290465|gb|EFQ69021.1| 30S ribosomal protein S13 [Enterococcus faecalis DAPTO 516]
 gi|311291770|gb|EFQ70326.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0470]
 gi|315026811|gb|EFT38743.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2137]
 gi|315028852|gb|EFT40784.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4000]
 gi|315031163|gb|EFT43095.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0017]
 gi|315035991|gb|EFT47923.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0027]
 gi|315147147|gb|EFT91163.1| 30S ribosomal protein S13 [Enterococcus faecalis TX4244]
 gi|315151095|gb|EFT95111.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0012]
 gi|315153585|gb|EFT97601.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0031]
 gi|315156235|gb|EFU00252.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0043]
 gi|315158620|gb|EFU02637.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0312]
 gi|315160751|gb|EFU04768.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0645]
 gi|315165878|gb|EFU09895.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1302]
 gi|315168124|gb|EFU12141.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1341]
 gi|315171436|gb|EFU15453.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1342]
 gi|315172670|gb|EFU16687.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1346]
 gi|315573538|gb|EFU85729.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309B]
 gi|315579350|gb|EFU91541.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0630]
 gi|315582114|gb|EFU94305.1| 30S ribosomal protein S13 [Enterococcus faecalis TX0309A]
 gi|323479446|gb|ADX78885.1| 30S ribosomal protein S13 [Enterococcus faecalis 62]
 gi|327534028|gb|AEA92862.1| 30S ribosomal protein S13 [Enterococcus faecalis OG1RF]
 gi|329577725|gb|EGG59151.1| 30S ribosomal protein S13 [Enterococcus faecalis TX1467]
          Length = 121

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  +++ +   + +  + RV  L   +   IR  I
Sbjct: 1   MARIAGVDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRKGPTKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|256825861|ref|YP_003149821.1| 30S ribosomal protein S13P [Kytococcus sedentarius DSM 20547]
 gi|256689254|gb|ACV07056.1| SSU ribosomal protein S13P [Kytococcus sedentarius DSM 20547]
          Length = 123

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV   L YI G+G   +        I    RV  L + +++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEIGLTYIFGVGRTRALQAVEACGIDRSTRVKDLNDEQLVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E ++Q+EGDLRR VA +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGNFQLEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTVSGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|212695282|ref|ZP_03303410.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855]
 gi|237711698|ref|ZP_04542179.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA]
 gi|237725861|ref|ZP_04556342.1| 30S ribosomal protein S13 [Bacteroides sp. D4]
 gi|265753117|ref|ZP_06088686.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA]
 gi|212662192|gb|EEB22766.1| hypothetical protein BACDOR_04822 [Bacteroides dorei DSM 17855]
 gi|229435669|gb|EEO45746.1| 30S ribosomal protein S13 [Bacteroides dorei 5_1_36/D4]
 gi|229454393|gb|EEO60114.1| 30S ribosomal protein S13 [Bacteroides sp. 9_1_42FAA]
 gi|263236303|gb|EEZ21798.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_33FAA]
          Length = 126

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDRDVKVKDWTDDQAARIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|311744781|ref|ZP_07718577.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272]
 gi|311311898|gb|EFQ81819.1| 30S ribosomal protein S13 [Aeromicrobium marinum DSM 15272]
          Length = 122

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL Y+ GIG   + +      I P  RVH L +S+++ +R  I
Sbjct: 1   MARLVGVDLPREKRIEIALTYVFGIGRTRATETLAATGIDPHTRVHALDDSQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  YQVEGDLRR V  +I+R M++G Y+G RHR  LPVRGQRT TNARTRK   +    +
Sbjct: 61  EAHYQVEGDLRREVTADIRRKMEIGSYQGRRHRAHLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|224827039|ref|ZP_03700136.1| ribosomal protein S13 [Lutiella nitroferrum 2002]
 gi|224600705|gb|EEG06891.1| ribosomal protein S13 [Lutiella nitroferrum 2002]
          Length = 120

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/121 (51%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP     V  L  I+GIG   +Q IC    +    +V  L ++E+ ++R+ +
Sbjct: 1   MARIAGVNIPNHAHAVIGLQAIYGIGQTRAQQICAAAGVVTSTKVKDLTDAEMDKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR + M+IKRLMD+G YRG+RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-FTVEGDLRREITMSIKRLMDMGSYRGMRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|255530538|ref|YP_003090910.1| 30S ribosomal protein S13 [Pedobacter heparinus DSM 2366]
 gi|255343522|gb|ACU02848.1| ribosomal protein S13 [Pedobacter heparinus DSM 2366]
          Length = 125

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++PR KR    L YI G+G  ++Q I  +  I   ++V    + E+  IR  I
Sbjct: 1   MARISGIDLPRNKRGEIGLTYIFGVGRATAQRILTEAGIDFNKKVQDWSDDELSAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
               +VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT  N+RTRK   K    +
Sbjct: 61  NDGVKVEGALRSEVQLNIKRLMDIGCYRGLRHRKGLPVRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296875381|ref|ZP_06899455.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912]
 gi|312867026|ref|ZP_07727237.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405]
 gi|319945812|ref|ZP_08020062.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641]
 gi|322390683|ref|ZP_08064197.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903]
 gi|296433574|gb|EFH19347.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 15912]
 gi|311097508|gb|EFQ55741.1| 30S ribosomal protein S13 [Streptococcus parasanguinis F0405]
 gi|319747877|gb|EFW00121.1| 30S ribosomal protein S13 [Streptococcus australis ATCC 700641]
 gi|321142656|gb|EFX38120.1| 30S ribosomal protein S13 [Streptococcus parasanguinis ATCC 903]
          Length = 121

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLPTSKKILAAAGVSEDIRVRDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|254779838|ref|YP_003057944.1| 30S ribosomal protein S13 [Helicobacter pylori B38]
 gi|254001750|emb|CAX29981.1| 30S ribosomal subunit protein S13 [Helicobacter pylori B38]
 gi|317178413|dbj|BAJ56201.1| 30S ribosomal protein S13 [Helicobacter pylori F30]
          Length = 120

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + +  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGVSFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|292492443|ref|YP_003527882.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4]
 gi|291581038|gb|ADE15495.1| ribosomal protein S13 [Nitrosococcus halophilus Nc4]
          Length = 118

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/115 (56%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   ++ IC    +  +++V  L +SE+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALTSIYGVGPTRAKKICEAAGVASDKKVKDLSDSELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + Y VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   +
Sbjct: 61  AK-YPVEGDLRREISMDIKRLMDLGCYRGLRHRRGLPVRGQRTQTNARTRKGPRR 114


>gi|32266899|ref|NP_860931.1| 30S ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
 gi|81665564|sp|Q7VGC2|RS13_HELHP RecName: Full=30S ribosomal protein S13
 gi|32262951|gb|AAP77997.1| ribosomal protein S13 [Helicobacter hepaticus ATCC 51449]
          Length = 120

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 71/120 (59%), Positives = 86/120 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSSQDI   + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSQDILKAVNISFDKRVSDLSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QESYMVEGDLRKKVTMDIKSLMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|24213462|ref|NP_710943.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658679|ref|YP_002765.1| 30S ribosomal protein S13 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|26454666|sp|Q9XD12|RS13_LEPIN RecName: Full=30S ribosomal protein S13
 gi|73917913|sp|Q72NI5|RS13_LEPIC RecName: Full=30S ribosomal protein S13
 gi|24194234|gb|AAN47961.1| 30S ribosomal protein S13 [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601923|gb|AAS71402.1| 30S ribosomal protein S13 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 125

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+ +
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EETAKVEGDLRSEIQLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|134096299|ref|YP_001101374.1| 30S ribosomal protein S13 [Herminiimonas arsenicoxydans]
 gi|158706238|sp|A4G9R6|RS13_HERAR RecName: Full=30S ribosomal protein S13
 gi|133740202|emb|CAL63253.1| 30S ribosomal subunit protein S13 [Herminiimonas arsenicoxydans]
          Length = 121

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  +  V  L  I+GIG   +Q IC+   +   ++V  L +SE+ ++R  I
Sbjct: 1   MARIAGVNVPNHQHTVIGLTAIYGIGRPRAQKICDATGVLTTKKVKDLDDSELEKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR ++MNIKRLMDLGCYRG+RHR+GLP RGQRT TNARTRK   K   + 
Sbjct: 61  AK-FIVEGDLRREISMNIKRLMDLGCYRGMRHRKGLPCRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|329116762|ref|ZP_08245479.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020]
 gi|326907167|gb|EGE54081.1| 30S ribosomal protein S13 [Streptococcus parauberis NCFD 2020]
          Length = 121

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y+ GIG  +SQ I     I  + RV  L   +   IR+ I
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVFGIGLATSQKILAAAGISEDIRVKDLTSDQEDAIRREI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DS-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKPTAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|320548031|ref|ZP_08042311.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812]
 gi|320447273|gb|EFW88036.1| 30S ribosomal protein S13 [Streptococcus equinus ATCC 9812]
          Length = 121

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116490681|ref|YP_810225.1| 30S ribosomal protein S13 [Oenococcus oeni PSU-1]
 gi|118586178|ref|ZP_01543652.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163]
 gi|290890096|ref|ZP_06553179.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429]
 gi|122277135|sp|Q04G62|RS13_OENOB RecName: Full=30S ribosomal protein S13
 gi|116091406|gb|ABJ56560.1| SSU ribosomal protein S13P [Oenococcus oeni PSU-1]
 gi|118433386|gb|EAV40078.1| ribosomal protein S13 [Oenococcus oeni ATCC BAA-1163]
 gi|290480287|gb|EFD88928.1| hypothetical protein AWRIB429_0569 [Oenococcus oeni AWRIB429]
          Length = 123

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  +++ +  +  +  + RV  L   +  ++R A+
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAEKVLAEAGVSEDVRVRDLSPEDEDKVRAAV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ +  +EGDLRR V++NIK L ++  YRG+RHRRGLPVRGQ T  NARTRK   +    
Sbjct: 61  DKLNLTLEGDLRREVSLNIKGLQEIASYRGIRHRRGLPVRGQHTKNNARTRKGPARAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|297569398|ref|YP_003690742.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2]
 gi|296925313|gb|ADH86123.1| 30S ribosomal protein S13 [Desulfurivibrio alkaliphilus AHT2]
          Length = 122

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 90/122 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ K +  AL YI+GIG  S++ I +   +P +R   +L ++EV ++R+ I
Sbjct: 1   MARIAGVDIPKNKHMEVALTYIYGIGRPSARRILDLAKLPYDRNSDELTDNEVAEVRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY VEGD RR V M+IKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK   +  V  
Sbjct: 61  EEDYVVEGDRRREVGMDIKRLMDLGCYRGLRHRKGLPCRGQRTSTNARTRKGPRRAAVKT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|29348113|ref|NP_811616.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482]
 gi|153805980|ref|ZP_01958648.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185]
 gi|160883041|ref|ZP_02064044.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483]
 gi|237717423|ref|ZP_04547904.1| 30S ribosomal protein S13 [Bacteroides sp. D1]
 gi|237718719|ref|ZP_04549200.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4]
 gi|253569615|ref|ZP_04847025.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6]
 gi|255690027|ref|ZP_05413702.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565]
 gi|260175440|ref|ZP_05761852.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
 gi|262406188|ref|ZP_06082738.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22]
 gi|293372096|ref|ZP_06618487.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f]
 gi|294644081|ref|ZP_06721858.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a]
 gi|294806541|ref|ZP_06765380.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b]
 gi|298386203|ref|ZP_06995760.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14]
 gi|298483088|ref|ZP_07001269.1| 30S ribosomal protein S13 [Bacteroides sp. D22]
 gi|299144600|ref|ZP_07037668.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23]
 gi|315923669|ref|ZP_07919909.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
 gi|32363309|sp|Q8A499|RS13_BACTN RecName: Full=30S ribosomal protein S13
 gi|29340016|gb|AAO77810.1| 30S ribosomal protein S13 [Bacteroides thetaiotaomicron VPI-5482]
 gi|149130657|gb|EDM21863.1| hypothetical protein BACCAC_00225 [Bacteroides caccae ATCC 43185]
 gi|156111513|gb|EDO13258.1| hypothetical protein BACOVA_01004 [Bacteroides ovatus ATCC 8483]
 gi|229443406|gb|EEO49197.1| 30S ribosomal protein S13 [Bacteroides sp. D1]
 gi|229451851|gb|EEO57642.1| 30S ribosomal protein S13 [Bacteroides sp. 2_2_4]
 gi|251841634|gb|EES69715.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_6]
 gi|260624634|gb|EEX47505.1| 30S ribosomal protein S13 [Bacteroides finegoldii DSM 17565]
 gi|262357063|gb|EEZ06153.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_22]
 gi|292632888|gb|EFF51475.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CMC 3f]
 gi|292640605|gb|EFF58846.1| 30S ribosomal protein S13 [Bacteroides ovatus SD CC 2a]
 gi|294446236|gb|EFG14864.1| 30S ribosomal protein S13 [Bacteroides xylanisolvens SD CC 1b]
 gi|295085405|emb|CBK66928.1| SSU ribosomal protein S13P [Bacteroides xylanisolvens XB1A]
 gi|298261431|gb|EFI04298.1| 30S ribosomal protein S13 [Bacteroides sp. 1_1_14]
 gi|298270832|gb|EFI12412.1| 30S ribosomal protein S13 [Bacteroides sp. D22]
 gi|298515091|gb|EFI38972.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_23]
 gi|313697544|gb|EFS34379.1| 30S ribosomal protein S13 [Bacteroides sp. D2]
          Length = 126

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|221126765|ref|XP_002165015.1| PREDICTED: similar to 30S ribosomal protein S13 [Hydra
           magnipapillata]
 gi|260222206|emb|CBA31537.1| 30S ribosomal protein S13 [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 121

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   ++V  L +S++ +IR  I
Sbjct: 1   MARIAGINIPPHQHSEIGLTAIFGIGRTRARKICEACGIAYSKKVKDLTDSDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   + 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|239787585|emb|CAX84053.1| 30S ribosomal protein S13 [uncultured bacterium]
          Length = 120

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 74/120 (61%), Positives = 85/120 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KR+  AL YI GIG + S+ I  +  +  E R   L E+E  +IR  I
Sbjct: 1   MARIAGVNIPINKRMEVALTYIFGIGPERSKKILKEAGVSTEVRARDLSEAETARIRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEGDLRR VAMN KRLMDLG YRGLRHRRGLP RGQRTHTNARTRK   +  V +
Sbjct: 61  DKDYVVEGDLRRQVAMNTKRLMDLGTYRGLRHRRGLPTRGQRTHTNARTRKGPRRAVVGK 120


>gi|149376662|ref|ZP_01894421.1| 30S ribosomal protein S13 [Marinobacter algicola DG893]
 gi|149359035|gb|EDM47500.1| 30S ribosomal protein S13 [Marinobacter algicola DG893]
          Length = 118

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYIFGVGKTAAQKLCDATGVKPDVKVKDLSDEQLESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-LAVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116


>gi|15645909|ref|NP_208088.1| 30S ribosomal protein S13 [Helicobacter pylori 26695]
 gi|108563666|ref|YP_627982.1| 30S ribosomal protein S13 [Helicobacter pylori HPAG1]
 gi|188528084|ref|YP_001910771.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
 gi|207108654|ref|ZP_03242816.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_CA4C1]
 gi|208435194|ref|YP_002266860.1| ribosomal protein S13 [Helicobacter pylori G27]
 gi|210135455|ref|YP_002301894.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
 gi|217032050|ref|ZP_03437550.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
 gi|217033615|ref|ZP_03439043.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
 gi|298735679|ref|YP_003728204.1| 30S ribosomal protein S13 [Helicobacter pylori B8]
 gi|308183406|ref|YP_003927533.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
 gi|308185048|ref|YP_003929181.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
 gi|2500456|sp|P56020|RS13_HELPY RecName: Full=30S ribosomal protein S13
 gi|123373689|sp|Q1CRW4|RS13_HELPH RecName: Full=30S ribosomal protein S13
 gi|226712744|sp|B6JND6|RS13_HELP2 RecName: Full=30S ribosomal protein S13
 gi|226712745|sp|B5Z8U5|RS13_HELPG RecName: Full=30S ribosomal protein S13
 gi|226712746|sp|B2UV59|RS13_HELPS RecName: Full=30S ribosomal protein S13
 gi|2314462|gb|AAD08339.1| ribosomal protein S13 (rps13) [Helicobacter pylori 26695]
 gi|107837439|gb|ABF85308.1| ribosomal protein S13 [Helicobacter pylori HPAG1]
 gi|188144324|gb|ACD48741.1| 30S ribosomal protein S13 [Helicobacter pylori Shi470]
 gi|208433123|gb|ACI27994.1| ribosomal protein S13 [Helicobacter pylori G27]
 gi|210133423|gb|ACJ08414.1| 30S ribosomal protein S13 [Helicobacter pylori P12]
 gi|216943961|gb|EEC23395.1| hypothetical protein HP9810_899g51 [Helicobacter pylori 98-10]
 gi|216946198|gb|EEC24806.1| hypothetical protein HPB128_16g10 [Helicobacter pylori B128]
 gi|261838615|gb|ACX98381.1| ribosomal protein S13 [Helicobacter pylori 51]
 gi|261840011|gb|ACX99776.1| hypothetical protein HPKB_1229 [Helicobacter pylori 52]
 gi|297380478|gb|ADI35365.1| 30S ribosomal protein S13 [Helicobacter pylori v225d]
 gi|298354868|emb|CBI65740.1| small subunit ribosomal protein S13 [Helicobacter pylori B8]
 gi|308060968|gb|ADO02864.1| 30S ribosomal protein S13 [Helicobacter pylori SJM180]
 gi|308062581|gb|ADO04469.1| 30S ribosomal protein S13 [Helicobacter pylori Cuz20]
 gi|308064073|gb|ADO05960.1| 30S ribosomal protein S13 [Helicobacter pylori Sat464]
 gi|308065591|gb|ADO07483.1| 30S ribosomal protein S13 [Helicobacter pylori PeCan4]
 gi|317009979|gb|ADU80559.1| 30S ribosomal protein S13 [Helicobacter pylori India7]
 gi|317011496|gb|ADU85243.1| 30S ribosomal protein S13 [Helicobacter pylori SouthAfrica7]
 gi|317014687|gb|ADU82123.1| 30S ribosomal protein S13 [Helicobacter pylori Gambia94/24]
 gi|317178035|dbj|BAJ55824.1| 30S ribosomal protein S13 [Helicobacter pylori F16]
 gi|317181018|dbj|BAJ58804.1| 30S ribosomal protein S13 [Helicobacter pylori F32]
          Length = 120

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|293390663|ref|ZP_06634997.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951197|gb|EFE01316.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 118

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  SK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|149926589|ref|ZP_01914849.1| ribosomal protein S13 [Limnobacter sp. MED105]
 gi|149824518|gb|EDM83734.1| ribosomal protein S13 [Limnobacter sp. MED105]
          Length = 121

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +  V  L  I GIG  +++ IC   +IP  ++V  L ++++ ++R  +
Sbjct: 1   MARIAGINIPSHQHTVIGLTAIFGIGRSTAKKICAVTSIPESKKVKDLDDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TN+RTRK   + G+A 
Sbjct: 61  GK-YLTEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNSRTRKGPKRAGIAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|115350345|ref|YP_772184.1| 30S ribosomal protein S13 [Burkholderia ambifaria AMMD]
 gi|134294466|ref|YP_001118201.1| 30S ribosomal protein S13 [Burkholderia vietnamiensis G4]
 gi|170700717|ref|ZP_02891712.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10]
 gi|171318371|ref|ZP_02907529.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5]
 gi|172059364|ref|YP_001807016.1| 30S ribosomal protein S13 [Burkholderia ambifaria MC40-6]
 gi|122324243|sp|Q0BJ23|RS13_BURCM RecName: Full=30S ribosomal protein S13
 gi|166231903|sp|A4JAR3|RS13_BURVG RecName: Full=30S ribosomal protein S13
 gi|226712704|sp|B1YRQ2|RS13_BURA4 RecName: Full=30S ribosomal protein S13
 gi|115280333|gb|ABI85850.1| SSU ribosomal protein S13P [Burkholderia ambifaria AMMD]
 gi|134137623|gb|ABO53366.1| SSU ribosomal protein S13P [Burkholderia vietnamiensis G4]
 gi|170134387|gb|EDT02720.1| ribosomal protein S13 [Burkholderia ambifaria IOP40-10]
 gi|171096449|gb|EDT41348.1| ribosomal protein S13 [Burkholderia ambifaria MEX-5]
 gi|171991881|gb|ACB62800.1| ribosomal protein S13 [Burkholderia ambifaria MC40-6]
          Length = 121

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   S+ IC+   +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRSRSICSAAGVEFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FIVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|171778399|ref|ZP_02919578.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282930|gb|EDT48354.1| hypothetical protein STRINF_00429 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 121

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V MNIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|319955879|ref|YP_004167142.1| SSU ribosomal protein s13p [Nitratifractor salsuginis DSM 16511]
 gi|319418283|gb|ADV45393.1| SSU ribosomal protein S13P [Nitratifractor salsuginis DSM 16511]
          Length = 120

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/119 (57%), Positives = 88/119 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  SS+ I +   I  ++RV++L ++E   IR+ I
Sbjct: 1   MARIAGVDLPKNKRMEYALTYIYGIGLTSSRKILDATGISYDKRVYELTDAEAATIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHRRGLPVRGQ+T TNARTRK   K   +
Sbjct: 61  QEHYMVEGDLRKKVMMDIKTLMDLGNYRGLRHRRGLPVRGQKTKTNARTRKGKRKTVGS 119


>gi|50955542|ref|YP_062830.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81390583|sp|Q6AD19|RS13_LEIXX RecName: Full=30S ribosomal protein S13
 gi|50952024|gb|AAT89725.1| 30S ribosomal protein S13 [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 124

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+G+G   +     +  I  E RV  L + +++ +R  I
Sbjct: 1   MARLAGVDIPREKRVEVALTYIYGVGRTRALQTLRETEISGEIRVKDLTDEQLVSLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +++VEGDLRR VA +I+R +++G Y G+RHR+GLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNFKVEGDLRREVAADIRRKVEIGSYEGIRHRKGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|282860836|ref|ZP_06269902.1| ribosomal protein S13 [Streptomyces sp. ACTE]
 gi|282564572|gb|EFB70108.1| ribosomal protein S13 [Streptomyces sp. ACTE]
          Length = 126

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEVALTYVFGIGRTRSKEILATTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++GCY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIGCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|270157889|ref|ZP_06186546.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968]
 gi|289163852|ref|YP_003453990.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150]
 gi|269989914|gb|EEZ96168.1| ribosomal protein S13p/S18e [Legionella longbeachae D-4968]
 gi|288857025|emb|CBJ10839.1| 30S ribosomal protein S13 [Legionella longbeachae NSW150]
          Length = 118

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 70/118 (59%), Positives = 85/118 (72%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +V AL  I+GIG  +S  +C+ + I P ++V +L ++++  +R  I
Sbjct: 1   MARIAGVNIPDHKHLVIALTAIYGIGKPTSIKLCSAVGIDPSKKVSELTDAQLESLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            +   VEGDLRR V MNIKRLMDLGCYRGLRHRRGLPV GQRT TNARTRK   KG  
Sbjct: 61  AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPVHGQRTKTNARTRKGRRKGTT 117


>gi|206602700|gb|EDZ39181.1| Ribosomal protein S13 [Leptospirillum sp. Group II '5-way CG']
          Length = 124

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 67/110 (60%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KRV  AL YI+GIG  +S  I     I P RRV  L + E+  +R+ I
Sbjct: 1   MARIVGIDLPRNKRVEIALTYIYGIGRSTSLSILKTTLIDPNRRVKDLTDEEIASLRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+ Y VEGDLRR V  NIKR MD+GCY GLRHR+GLPVRGQRT TNARTR
Sbjct: 61  EKTYLVEGDLRRQVTQNIKRKMDIGCYVGLRHRKGLPVRGQRTKTNARTR 110


>gi|241895165|ref|ZP_04782461.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313]
 gi|241871471|gb|EER75222.1| 30S ribosomal protein S13 [Weissella paramesenteroides ATCC 33313]
          Length = 121

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL Y++GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYVYGIGNSTAQKVLAEAKVSEDVRVRDLTPDQEDAIRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V+M+IK L ++  YRG+RHR+GLPVRGQ T  NARTRK        +
Sbjct: 61  D-GIKVEGDLRREVSMSIKALQEINSYRGIRHRKGLPVRGQHTKNNARTRKGPAVSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|227543599|ref|ZP_03973648.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A]
 gi|300909372|ref|ZP_07126833.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112]
 gi|154705526|gb|ABS84189.1| ribosomal protein S13p [Lactobacillus reuteri]
 gi|227186439|gb|EEI66510.1| 30S ribosomal protein S13 [Lactobacillus reuteri CF48-3A]
 gi|300893237|gb|EFK86596.1| 30S ribosomal protein S13 [Lactobacillus reuteri SD2112]
          Length = 121

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  +++ I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVVGLTYIFGIGDSTAKKILENAGVSEDIRVRDLTPDQEEKIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q  QVEGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DQ-IQVEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVAIANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 [Streptococcus suis 05ZYH33]
 gi|146319944|ref|YP_001199655.1| 30S ribosomal protein S13 [Streptococcus suis 98HAH33]
 gi|223933082|ref|ZP_03625075.1| ribosomal protein S13 [Streptococcus suis 89/1591]
 gi|253751013|ref|YP_003024154.1| 30S ribosomal protein S13 [Streptococcus suis SC84]
 gi|253752913|ref|YP_003026053.1| 30S ribosomal protein S13 [Streptococcus suis P1/7]
 gi|253754738|ref|YP_003027878.1| 30S ribosomal protein S13 [Streptococcus suis BM407]
 gi|330831944|ref|YP_004400769.1| 30S ribosomal protein S13 [Streptococcus suis ST3]
 gi|158706285|sp|A4VYR6|RS13_STRS2 RecName: Full=30S ribosomal protein S13
 gi|158706287|sp|A4VSH6|RS13_STRSY RecName: Full=30S ribosomal protein S13
 gi|145688559|gb|ABP89065.1| Ribosomal protein S13 [Streptococcus suis 05ZYH33]
 gi|145690750|gb|ABP91255.1| Ribosomal protein S13 [Streptococcus suis 98HAH33]
 gi|223898269|gb|EEF64637.1| ribosomal protein S13 [Streptococcus suis 89/1591]
 gi|251815302|emb|CAZ50870.1| 30S ribosomal protein S13 [Streptococcus suis SC84]
 gi|251817202|emb|CAZ54925.1| 30S ribosomal protein S13 [Streptococcus suis BM407]
 gi|251819158|emb|CAR44290.1| 30S ribosomal protein S13 [Streptococcus suis P1/7]
 gi|292557555|gb|ADE30556.1| ribosomal protein S13 [Streptococcus suis GZ1]
 gi|319757264|gb|ADV69206.1| 30S ribosomal protein S13 [Streptococcus suis JS14]
 gi|329306167|gb|AEB80583.1| 30S ribosomal protein S13 [Streptococcus suis ST3]
          Length = 121

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|126666791|ref|ZP_01737768.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17]
 gi|126628836|gb|EAZ99456.1| 30S ribosomal protein S13 [Marinobacter sp. ELB17]
          Length = 118

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV +L YI G+G  ++Q +C+   + P+ +V  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDHKHVVVSLTYIFGVGKTTAQKLCDATGVKPDVKVKDLTDEQLESLRTDV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V MNIKRL DLGC+RGLRHR GLPVRGQRT TNARTRK   K  
Sbjct: 61  IKG-SVEGDLRREVQMNIKRLKDLGCHRGLRHRHGLPVRGQRTKTNARTRKGPRKPI 116


>gi|30918554|sp|P15757|RS13_BACST RecName: Full=30S ribosomal protein S13; AltName: Full=BS14
          Length = 120

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 2/122 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+GIG  ++  I  +  +  + RV  L E E+ +IR+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIYGIGKPTA-QILKEAGVSEDTRVRDLTEEELGRIREIV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEGDLRR V++NIKRLM++GCYRGLRHRRGLPVRGQ T  NARTRK   +    +
Sbjct: 60  GR-LKVEGDLRREVSLNIKRLMEIGCYRGLRHRRGLPVRGQNTKNNARTRKGPRRTVANK 118

Query: 121 KR 122
           K+
Sbjct: 119 KK 120


>gi|157363467|ref|YP_001470234.1| 30S ribosomal protein S13 [Thermotoga lettingae TMO]
 gi|166991604|sp|A8F4T6|RS13_THELT RecName: Full=30S ribosomal protein S13
 gi|157314071|gb|ABV33170.1| ribosomal protein S13 [Thermotoga lettingae TMO]
          Length = 128

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL Y++G+G   + +I     I P++RV  L + EV +I + I
Sbjct: 1   MARIVGVELPGNKKCFVALTYLYGVGRTRAFEILKNTGINPDKRVKDLTDEEVSKITKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEG+LR  +  NIKRL+D+GCYRG RH+ GLPVRGQRT +NARTRK      +  
Sbjct: 61  QDHYKVEGELRTDINRNIKRLIDIGCYRGFRHKLGLPVRGQRTRSNARTRKGPRPSRIKT 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|225552343|ref|ZP_03773283.1| ribosomal protein S13p/S18e [Borrelia sp. SV1]
 gi|225371341|gb|EEH00771.1| ribosomal protein S13p/S18e [Borrelia sp. SV1]
          Length = 125

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKVAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|302536276|ref|ZP_07288618.1| 30S ribosomal protein S13 [Streptomyces sp. C]
 gi|302445171|gb|EFL16987.1| 30S ribosomal protein S13 [Streptomyces sp. C]
          Length = 126

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IPR KRV  AL Y+ GIG   S++I     + P  RV  L E ++++IR+ +
Sbjct: 1   MARVSGVDIPREKRVEIALTYVFGIGRTRSKEILASTGVNPNTRVRDLAEEDLVKIREYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + + + EGDLRR +  +I+R +++ CY+G+RHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  DANLRTEGDLRREIQGDIRRKIEIQCYQGIRHRRGLPVHGQRTSTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|228470693|ref|ZP_04055544.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3]
 gi|228307550|gb|EEK16546.1| 30S ribosomal protein S13 [Porphyromonas uenonis 60-3]
          Length = 126

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  S+  I +   +    +V    + +   IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSAARILDAAGVDRNIKVQDWTDDQAAAIREQ 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I   Y+VEGDLR    +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK   K    
Sbjct: 61  ISNGYKVEGDLRSEKQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKGKRKTVAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311]
 gi|55823797|ref|YP_142238.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066]
 gi|116628574|ref|YP_821193.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMD-9]
 gi|228478087|ref|ZP_04062698.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126]
 gi|312862416|ref|ZP_07722659.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396]
 gi|322515891|ref|ZP_08068833.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124]
 gi|81558873|sp|Q5LXT5|RS13_STRT1 RecName: Full=30S ribosomal protein S13
 gi|81560060|sp|Q5M2D7|RS13_STRT2 RecName: Full=30S ribosomal protein S13
 gi|122266832|sp|Q03IH5|RS13_STRTD RecName: Full=30S ribosomal protein S13
 gi|55737866|gb|AAV61508.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311]
 gi|55739782|gb|AAV63423.1| 30S ribosomal protein S13 [Streptococcus thermophilus CNRZ1066]
 gi|116101851|gb|ABJ66997.1| SSU ribosomal protein S13P [Streptococcus thermophilus LMD-9]
 gi|228250267|gb|EEK09520.1| 30S ribosomal protein S13 [Streptococcus salivarius SK126]
 gi|311102059|gb|EFQ60259.1| 30S ribosomal protein S13 [Streptococcus vestibularis F0396]
 gi|312279235|gb|ADQ63892.1| 30S ribosomal protein S13 [Streptococcus thermophilus ND03]
 gi|322125678|gb|EFX97005.1| 30S ribosomal protein S13 [Streptococcus vestibularis ATCC 49124]
          Length = 121

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTNDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|322388378|ref|ZP_08061981.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779]
 gi|322391222|ref|ZP_08064694.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780]
 gi|321140691|gb|EFX36193.1| 30S ribosomal protein S13 [Streptococcus infantis ATCC 700779]
 gi|321145975|gb|EFX41364.1| 30S ribosomal protein S13 [Streptococcus peroris ATCC 700780]
          Length = 121

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +SQ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSQKILAAAGVSEDIRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|319900948|ref|YP_004160676.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108]
 gi|319415979|gb|ADV43090.1| SSU ribosomal protein S13P [Bacteroides helcogenes P 36-108]
          Length = 126

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEVALTYVYGIGRSSSAKILDKAGVDKDLKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAEYKVEGDLRSEIQLNIKRLMDIGCYRGVRHRIGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|24380345|ref|NP_722300.1| 30S ribosomal protein S13 [Streptococcus mutans UA159]
 gi|290581266|ref|YP_003485658.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025]
 gi|315222795|ref|ZP_07864681.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211]
 gi|319940037|ref|ZP_08014391.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV]
 gi|32363320|sp|Q8DS35|RS13_STRMU RecName: Full=30S ribosomal protein S13
 gi|24378363|gb|AAN59606.1|AE015023_7 30S ribosomal protein S13 [Streptococcus mutans UA159]
 gi|254998165|dbj|BAH88766.1| 30S ribosomal protein S13 [Streptococcus mutans NN2025]
 gi|315188098|gb|EFU21827.1| 30S ribosomal protein S13 [Streptococcus anginosus F0211]
 gi|319810751|gb|EFW07078.1| 30S ribosomal protein S13 [Streptococcus anginosus 1_2_62CV]
          Length = 121

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|282882509|ref|ZP_06291130.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B]
 gi|300814677|ref|ZP_07094928.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281297651|gb|EFA90126.1| 30S ribosomal protein S13 [Peptoniphilus lacrimalis 315-B]
 gi|300511296|gb|EFK38545.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 120

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI GIG   SQ I     +  + RV  L E+E+ +IR  I
Sbjct: 1   MARIAGVDLPREKRVEIGLTYIFGIGRSRSQKILKDADVNFDTRVKDLTEAELGRIRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR VAMNIKRL ++ CYRG RH+ GLPVRGQ+T TNARTRK   K    +
Sbjct: 61  QK-YHVEGDLRRDVAMNIKRLREINCYRGRRHKAGLPVRGQKTKTNARTRKGPKKLIAKK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|284042828|ref|YP_003393168.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684]
 gi|283947049|gb|ADB49793.1| 30S ribosomal protein S13 [Conexibacter woesei DSM 14684]
          Length = 126

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/118 (56%), Positives = 82/118 (69%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  KRV   L YI+GIG   S ++  K+ I P+  V  L E EV ++R  I
Sbjct: 1   MARIAGINIPLNKRVEIGLTYIYGIGRSRSNELLAKVGISPDTYVRDLTEDEVGKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
           +    VEGDLRR  + N+KRLM++GCYRGLRHRRGLPVRGQ+T TNARTRK   +  V
Sbjct: 61  DS-LTVEGDLRRERSQNVKRLMEIGCYRGLRHRRGLPVRGQKTKTNARTRKGPKRMSV 117


>gi|291166854|gb|EFE28900.1| 30S ribosomal protein S13 [Filifactor alocis ATCC 35896]
          Length = 121

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI GIG  +S  I     I P+ R+  L E EV  +R+AI
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIFGIGRPTSNKILKDTGINPDTRIKDLTEEEVNTLRKAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  D-NYLVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRKGSKRTVGRK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|296130464|ref|YP_003637714.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109]
 gi|296022279|gb|ADG75515.1| 30S ribosomal protein S13 [Cellulomonas flavigena DSM 20109]
          Length = 126

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KRV  AL YI G+G   +        I P+ RV  L +++++ +R  +
Sbjct: 1   MARLIGVDLPRDKRVEVALTYIFGVGRTRAHQALAATGISPDVRVKDLDDAQLVALRDFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  +++EGDLRR +A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DGSFKLEGDLRREIAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|282880977|ref|ZP_06289668.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1]
 gi|281305200|gb|EFA97269.1| 30S ribosomal protein S13 [Prevotella timonensis CRIS 5C-B1]
          Length = 126

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +   IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVDRDLKVSEWTDDQAASIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|251781542|ref|YP_002995843.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390170|dbj|BAH80629.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|322410882|gb|EFY01790.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
 gi|323126335|gb|ADX23632.1| 30S ribosomal protein S13 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 121

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|221218102|ref|ZP_03589568.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a]
 gi|224532893|ref|ZP_03673505.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23]
 gi|224533622|ref|ZP_03674211.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a]
 gi|225548633|ref|ZP_03769680.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a]
 gi|225549635|ref|ZP_03770601.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a]
 gi|221192050|gb|EEE18271.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 72a]
 gi|224512169|gb|EEF82558.1| ribosomal protein S13p/S18e [Borrelia burgdorferi WI91-23]
 gi|224513295|gb|EEF83657.1| ribosomal protein S13p/S18e [Borrelia burgdorferi CA-11.2a]
 gi|225369912|gb|EEG99359.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 118a]
 gi|225370663|gb|EEH00099.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 94a]
 gi|312148169|gb|ADQ30828.1| ribosomal protein S13p/S18e [Borrelia burgdorferi JD1]
          Length = 125

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|113460230|ref|YP_718288.1| 30S ribosomal protein S13 [Haemophilus somnus 129PT]
 gi|123031100|sp|Q0I140|RS13_HAES1 RecName: Full=30S ribosomal protein S13
 gi|112822273|gb|ABI24362.1| SSU ribosomal protein S13P [Haemophilus somnus 129PT]
          Length = 118

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|71065081|ref|YP_263808.1| 30S ribosomal protein S13 [Psychrobacter arcticus 273-4]
 gi|91207720|sp|Q4FUD4|RS13_PSYA2 RecName: Full=30S ribosomal protein S13
 gi|71038066|gb|AAZ18374.1| SSU ribosomal protein S13P [Psychrobacter arcticus 273-4]
          Length = 118

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/116 (55%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q I   + I P  +V QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK   + 
Sbjct: 61  SE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPTRP 115


>gi|121603257|ref|YP_980586.1| 30S ribosomal protein S13 [Polaromonas naphthalenivorans CJ2]
 gi|158706258|sp|A1VJ37|RS13_POLNA RecName: Full=30S ribosomal protein S13
 gi|120592226|gb|ABM35665.1| SSU ribosomal protein S13P [Polaromonas naphthalenivorans CJ2]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L +S++ +IR  I
Sbjct: 1   MARIAGINIPPQKHAEIGLTAIFGIGRTRARKICEACEIDYAKKIKDLTDSDLEKIRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   + 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|322386330|ref|ZP_08059960.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100]
 gi|321269554|gb|EFX52484.1| 30S ribosomal protein S13 [Streptococcus cristatus ATCC 51100]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGISEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|299143169|ref|ZP_07036249.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517654|gb|EFI41393.1| 30S ribosomal protein S13 [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 120

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 2/122 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV   L YI+GIG K SQ+I     +  + RV  L ESE+ +IR  I
Sbjct: 1   MARIAGIDLPREKRVEIGLTYIYGIGRKRSQEILTNADVNFDTRVKDLTESELARIRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRR +AMNIKRL ++ CYRG+RH++GLPVRGQ+T TNARTRK   K  V++
Sbjct: 61  DK-YHVEGDLRRDIAMNIKRLKEINCYRGMRHKKGLPVRGQKTKTNARTRKGPKKL-VSK 118

Query: 121 KR 122
           K+
Sbjct: 119 KK 120


>gi|294155441|ref|YP_003559825.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145]
 gi|291600534|gb|ADE20030.1| 30S ribosomal protein S13 [Mycoplasma crocodyli MP145]
          Length = 122

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRVV +L YI+GIG   ++ IC +  I  + RV  L E E+ +IR+ +
Sbjct: 1   MARILNVEIPNDKRVVISLTYIYGIGPSLAKQICAEAKINEDSRVKSLSEEELSRIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V +NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKKFTTEGDLRREVNLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|317182542|dbj|BAJ60326.1| 30S ribosomal protein S13 [Helicobacter pylori F57]
          Length = 120

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQGYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|270307865|ref|YP_003329923.1| ribosomal protein S13 [Dehalococcoides sp. VS]
 gi|270153757|gb|ACZ61595.1| ribosomal protein S13 [Dehalococcoides sp. VS]
          Length = 129

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/120 (48%), Positives = 84/120 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLAQAGVDKAIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+  LPVRGQRT TNARTR+   K    R
Sbjct: 61  DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120


>gi|156932258|ref|YP_001436174.1| 30S ribosomal protein S13 [Cronobacter sakazakii ATCC BAA-894]
 gi|260599618|ref|YP_003212189.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032]
 gi|156530512|gb|ABU75338.1| hypothetical protein ESA_00029 [Cronobacter sakazakii ATCC BAA-894]
 gi|260218795|emb|CBA34143.1| 30S ribosomal protein S13 [Cronobacter turicensis z3032]
          Length = 118

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   +    + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAVGFAEDVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|295425629|ref|ZP_06818316.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664]
 gi|295064645|gb|EFG55566.1| 30S ribosomal protein S13 [Lactobacillus amylolyticus DSM 11664]
          Length = 116

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/115 (55%), Positives = 84/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVVALTYIYGIGEPTAKKICKDAGVSEDIRSKDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+GCYRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGCYRGIRHRRGLPVRGQNTKNNARTRKGAKR 114


>gi|56707500|ref|YP_169396.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89255692|ref|YP_513053.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110669971|ref|YP_666528.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|115314192|ref|YP_762915.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496874|ref|YP_897924.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida
           U112]
 gi|134302564|ref|YP_001122534.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501640|ref|YP_001427705.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010991|ref|ZP_02275922.1| ribosomal protein S13p/S18e [Francisella tularensis subsp.
           holarctica FSC200]
 gi|187932121|ref|YP_001892106.1| 30S ribosomal protein S13 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194324096|ref|ZP_03057870.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida
           FTE]
 gi|208780322|ref|ZP_03247663.1| ribosomal protein S13p/S18e [Francisella novicida FTG]
 gi|224456563|ref|ZP_03665036.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254367073|ref|ZP_04983108.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           257]
 gi|254368643|ref|ZP_04984658.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254370811|ref|ZP_04986816.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254372231|ref|ZP_04987722.1| 30S ribosomal protein S13 [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373713|ref|ZP_04989196.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548]
 gi|254874320|ref|ZP_05247030.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|290953191|ref|ZP_06557812.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313559|ref|ZP_06804148.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           URFT1]
 gi|81597922|sp|Q5NHU6|RS13_FRATT RecName: Full=30S ribosomal protein S13
 gi|122325770|sp|Q0BNQ6|RS13_FRATO RecName: Full=30S ribosomal protein S13
 gi|122501252|sp|Q2A5E8|RS13_FRATH RecName: Full=30S ribosomal protein S13
 gi|123169579|sp|Q14J98|RS13_FRAT1 RecName: Full=30S ribosomal protein S13
 gi|158706231|sp|A0Q4K5|RS13_FRATN RecName: Full=30S ribosomal protein S13
 gi|158706232|sp|A4IZR2|RS13_FRATW RecName: Full=30S ribosomal protein S13
 gi|166231912|sp|A7N9U6|RS13_FRATF RecName: Full=30S ribosomal protein S13
 gi|226712740|sp|B2SDW3|RS13_FRATM RecName: Full=30S ribosomal protein S13
 gi|56603992|emb|CAG44980.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|89143523|emb|CAJ78699.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           LVS]
 gi|110320304|emb|CAL08363.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC198]
 gi|115129091|gb|ABI82278.1| ribosomal protein S13 [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118422780|gb|ABK89170.1| 30S ribosomal protein S13 [Francisella novicida U112]
 gi|134050341|gb|ABO47412.1| ribosomal protein S13 [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134252898|gb|EBA51992.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           257]
 gi|151569054|gb|EDN34708.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           FSC033]
 gi|151569960|gb|EDN35614.1| 30S ribosomal protein S13 [Francisella novicida GA99-3549]
 gi|151571434|gb|EDN37088.1| 30S ribosomal protein S13 [Francisella novicida GA99-3548]
 gi|156252243|gb|ABU60749.1| ribosomal protein S13p/S18e [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121551|gb|EDO65736.1| 30S ribosomal protein S13 [Francisella tularensis subsp. holarctica
           FSC022]
 gi|187713030|gb|ACD31327.1| 30S ribosomal protein S13 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194321543|gb|EDX19027.1| ribosomal protein S13p/S18e [Francisella tularensis subsp. novicida
           FTE]
 gi|208743690|gb|EDZ89993.1| ribosomal protein S13p/S18e [Francisella novicida FTG]
 gi|254840319|gb|EET18755.1| 30S ribosomal protein S13 rpsM [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158644|gb|ADA78035.1| 30S ribosomal protein S13 [Francisella tularensis subsp. tularensis
           NE061598]
 gi|328676343|gb|AEB27213.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida Fx1]
          Length = 118

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 1/119 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E +V  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEEQVESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK   K   A
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118


>gi|315304919|ref|ZP_07875023.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596]
 gi|313626710|gb|EFR95739.1| 30S ribosomal protein S13 [Listeria ivanovii FSL F6-596]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++  +  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|223038487|ref|ZP_03608781.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267]
 gi|255321749|ref|ZP_05362904.1| 30S ribosomal protein S13 [Campylobacter showae RM3277]
 gi|222880344|gb|EEF15431.1| 30S ribosomal protein S13 [Campylobacter rectus RM3267]
 gi|255301229|gb|EET80491.1| 30S ribosomal protein S13 [Campylobacter showae RM3277]
          Length = 122

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L YI+GIG   S+ I +   I  ++RV+ L E E   IR+ I
Sbjct: 1   MARIAGVDLPKKKRIEYGLTYIYGIGLHKSRQILDATKISYDKRVNDLTEDEAAAIRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++++ VEGDLR++VAM+IK LMDLG YRGLRHR+GLPVRGQ+T TNARTRK   K   A 
Sbjct: 61  QENHVVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQKTKTNARTRKGKRKTVGAA 120

Query: 121 KR 122
            +
Sbjct: 121 TK 122


>gi|72163019|ref|YP_290676.1| 30S ribosomal protein S13 [Thermobifida fusca YX]
 gi|91207629|sp|Q47LL9|RS13_THEFY RecName: Full=30S ribosomal protein S13
 gi|71916751|gb|AAZ56653.1| SSU ribosomal protein S13P [Thermobifida fusca YX]
          Length = 126

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/110 (56%), Positives = 86/110 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   + +      + P+ RV+QL E E++++R+ I
Sbjct: 1   MARIAGVDLPRDKRVEVALTYVYGIGRSRAAETLANTGVNPDTRVYQLTEEELVKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  DANYKVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|317050552|ref|YP_004111668.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
 gi|316945636|gb|ADU65112.1| 30S ribosomal protein S13 [Desulfurispirillum indicum S5]
          Length = 120

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 89/122 (72%), Gaps = 2/122 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++P+ KRV   L YI+G+G   S+ I   ++I  +++V +L E EV  +R+A+
Sbjct: 1   MARVAGVDLPKNKRVEIGLTYIYGVGRSRSRQILANVSIDMDKKVGELSEDEVNTLRKAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y VEGDLR+ V+++IKRL DLGCYRGLRHR GLPVRGQ T  N+RTRK   +  V +
Sbjct: 61  EE-YDVEGDLRKNVSLDIKRLKDLGCYRGLRHRSGLPVRGQNTKNNSRTRKGPKRT-VGK 118

Query: 121 KR 122
           K+
Sbjct: 119 KK 120


>gi|53720798|ref|YP_109784.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243]
 gi|53723831|ref|YP_104143.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 23344]
 gi|76808694|ref|YP_335117.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710b]
 gi|121599064|ref|YP_994433.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1]
 gi|124383459|ref|YP_001027918.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229]
 gi|126441434|ref|YP_001060727.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668]
 gi|126450605|ref|YP_001083013.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247]
 gi|126452378|ref|YP_001068011.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a]
 gi|134283124|ref|ZP_01769825.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305]
 gi|167001676|ref|ZP_02267468.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20]
 gi|167721554|ref|ZP_02404790.1| 30S ribosomal protein S13 [Burkholderia pseudomallei DM98]
 gi|167740528|ref|ZP_02413302.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 14]
 gi|167817733|ref|ZP_02449413.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 91]
 gi|167826130|ref|ZP_02457601.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 9]
 gi|167838189|ref|ZP_02465048.1| 30S ribosomal protein S13 [Burkholderia thailandensis MSMB43]
 gi|167847642|ref|ZP_02473150.1| 30S ribosomal protein S13 [Burkholderia pseudomallei B7210]
 gi|167896214|ref|ZP_02483616.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 7894]
 gi|167904596|ref|ZP_02491801.1| 30S ribosomal protein S13 [Burkholderia pseudomallei NCTC 13177]
 gi|167912861|ref|ZP_02499952.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 112]
 gi|167920820|ref|ZP_02507911.1| 30S ribosomal protein S13 [Burkholderia pseudomallei BCC215]
 gi|217424717|ref|ZP_03456214.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576]
 gi|226198266|ref|ZP_03793837.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9]
 gi|237814122|ref|YP_002898573.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346]
 gi|238562961|ref|ZP_00439643.2| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4]
 gi|242316204|ref|ZP_04815220.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b]
 gi|254175202|ref|ZP_04881863.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399]
 gi|254180362|ref|ZP_04886960.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655]
 gi|254190325|ref|ZP_04896833.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237]
 gi|254198511|ref|ZP_04904932.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13]
 gi|254201216|ref|ZP_04907580.1| 30S ribosomal protein S13 [Burkholderia mallei FMH]
 gi|254206557|ref|ZP_04912908.1| 30S ribosomal protein S13 [Burkholderia mallei JHU]
 gi|254261560|ref|ZP_04952614.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a]
 gi|254300599|ref|ZP_04968044.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e]
 gi|254357095|ref|ZP_04973369.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280]
 gi|81378947|sp|Q63Q34|RS13_BURPS RecName: Full=30S ribosomal protein S13
 gi|81604188|sp|Q62GM8|RS13_BURMA RecName: Full=30S ribosomal protein S13
 gi|91207691|sp|Q3JMT6|RS13_BURP1 RecName: Full=30S ribosomal protein S13
 gi|158706218|sp|A3P090|RS13_BURP0 RecName: Full=30S ribosomal protein S13
 gi|166231899|sp|A3MRX7|RS13_BURM7 RecName: Full=30S ribosomal protein S13
 gi|166231900|sp|A2S7J9|RS13_BURM9 RecName: Full=30S ribosomal protein S13
 gi|166231901|sp|A1V880|RS13_BURMS RecName: Full=30S ribosomal protein S13
 gi|166231902|sp|A3NEF6|RS13_BURP6 RecName: Full=30S ribosomal protein S13
 gi|52211212|emb|CAH37201.1| 30S ribosomal protein S13 [Burkholderia pseudomallei K96243]
 gi|52427254|gb|AAU47847.1| ribosomal protein S13 [Burkholderia mallei ATCC 23344]
 gi|76578147|gb|ABA47622.1| ribosomal protein S13p/S18e [Burkholderia pseudomallei 1710b]
 gi|121227874|gb|ABM50392.1| 30S ribosomal protein S13 [Burkholderia mallei SAVP1]
 gi|124291479|gb|ABN00748.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10229]
 gi|126220927|gb|ABN84433.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 668]
 gi|126226020|gb|ABN89560.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106a]
 gi|126243475|gb|ABO06568.1| 30S ribosomal protein S13 [Burkholderia mallei NCTC 10247]
 gi|134245319|gb|EBA45412.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 305]
 gi|147747110|gb|EDK54186.1| 30S ribosomal protein S13 [Burkholderia mallei FMH]
 gi|147752099|gb|EDK59165.1| 30S ribosomal protein S13 [Burkholderia mallei JHU]
 gi|148026159|gb|EDK84244.1| 30S ribosomal protein S13 [Burkholderia mallei 2002721280]
 gi|157810485|gb|EDO87655.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 406e]
 gi|157938001|gb|EDO93671.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pasteur 52237]
 gi|160696247|gb|EDP86217.1| 30S ribosomal protein S13 [Burkholderia mallei ATCC 10399]
 gi|169655251|gb|EDS87944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei S13]
 gi|184210901|gb|EDU07944.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1655]
 gi|217392173|gb|EEC32198.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 576]
 gi|225929786|gb|EEH25802.1| 30S ribosomal protein S13 [Burkholderia pseudomallei Pakistan 9]
 gi|237506633|gb|ACQ98951.1| 30S ribosomal protein S13 [Burkholderia pseudomallei MSHR346]
 gi|238521645|gb|EEP85095.1| 30S ribosomal protein S13 [Burkholderia mallei GB8 horse 4]
 gi|242139443|gb|EES25845.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1106b]
 gi|243062573|gb|EES44759.1| 30S ribosomal protein S13 [Burkholderia mallei PRL-20]
 gi|254220249|gb|EET09633.1| 30S ribosomal protein S13 [Burkholderia pseudomallei 1710a]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|152978163|ref|YP_001343792.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z]
 gi|150839886|gb|ABR73857.1| ribosomal protein S13 [Actinobacillus succinogenes 130Z]
          Length = 118

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQTICAAAGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|94266331|ref|ZP_01290033.1| Ribosomal protein S13 [delta proteobacterium MLMS-1]
 gi|93453085|gb|EAT03564.1| Ribosomal protein S13 [delta proteobacterium MLMS-1]
          Length = 122

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP+ K +  AL YIHGIG  S++ I +   +P  R   +L + E+ +IR+ +
Sbjct: 1   MARLAGVDIPKNKHMEVALTYIHGIGRSSARRILDLAGLPYNRNSDELADGEIAEIRKIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + VEGD RR V M+IKRLMDLGCYRGLRHRRGLP RGQRTHTNARTRK   +  V  
Sbjct: 61  EEQFVVEGDRRREVGMDIKRLMDLGCYRGLRHRRGLPCRGQRTHTNARTRKGPRRAAVKS 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|195977232|ref|YP_002122476.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225867689|ref|YP_002743637.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus]
 gi|225869560|ref|YP_002745507.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047]
 gi|226712787|sp|B4U524|RS13_STREM RecName: Full=30S ribosomal protein S13
 gi|254811166|sp|C0M7C5|RS13_STRE4 RecName: Full=30S ribosomal protein S13
 gi|259494691|sp|C0ME29|RS13_STRS7 RecName: Full=30S ribosomal protein S13
 gi|195973937|gb|ACG61463.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225698964|emb|CAW92011.1| 30S ribosomal protein S13 [Streptococcus equi subsp. equi 4047]
 gi|225700965|emb|CAW97686.1| 30S ribosomal protein S13 [Streptococcus equi subsp. zooepidemicus]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DT-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|288904297|ref|YP_003429518.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34]
 gi|306830326|ref|ZP_07463497.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306832571|ref|ZP_07465711.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338]
 gi|325977276|ref|YP_004286992.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731022|emb|CBI12566.1| ribosomal protein S13 [Streptococcus gallolyticus UCN34]
 gi|304425329|gb|EFM28455.1| 30S ribosomal protein S13 [Streptococcus bovis ATCC 700338]
 gi|304427573|gb|EFM30674.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177204|emb|CBZ47248.1| 30S ribosomal protein S13 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 121

 Score =  169 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|205372044|ref|ZP_03224861.1| 30S ribosomal protein S13 [Bacillus coahuilensis m4-4]
          Length = 127

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI+G+G  ++Q I  +  +  + RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPREKRVVISLTYIYGVGKNTAQKILAEAGVSEDTRVRDLTEEELGKIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR +++NIKRLM++G +RG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DT-YKVEGDLRREISLNIKRLMEIGSFRGIRHRRGLPVRGQNTKNNARTRKGPRKTVANK 119

Query: 121 KR 122
           ++
Sbjct: 120 EK 121


>gi|313884421|ref|ZP_07818182.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620205|gb|EFR31633.1| 30S ribosomal protein S13 [Eremococcus coleocola ACS-139-V-Col8]
          Length = 120

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/121 (56%), Positives = 85/121 (70%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG K++Q+I  +  +  + RV  L   E+ +IRQ I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKKTAQNILAEANVSEDTRVKDLTNEELDRIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR + M+IKRL ++G YRGLRHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  D-GIKVEGDLRRDIRMDIKRLQEIGSYRGLRHRRGLPVRGQNTKNNARTRKGPKKSLAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|199598856|ref|ZP_03212267.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001]
 gi|229552731|ref|ZP_04441456.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1]
 gi|258509458|ref|YP_003172209.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG]
 gi|258540656|ref|YP_003175155.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus Lc 705]
 gi|199590268|gb|EDY98363.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus HN001]
 gi|229313937|gb|EEN79910.1| ribosomal protein S13 [Lactobacillus rhamnosus LMS2-1]
 gi|257149385|emb|CAR88358.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus GG]
 gi|257152332|emb|CAR91304.1| SSU/30S ribosomal protein S13P [Lactobacillus rhamnosus Lc 705]
 gi|259650737|dbj|BAI42899.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus GG]
          Length = 121

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKATMAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|224534712|ref|ZP_03675284.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S]
 gi|224513960|gb|EEF84282.1| ribosomal protein S13p/S18e [Borrelia spielmanii A14S]
          Length = 125

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CN+ +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLRIALTSIYGIGRTRALEVCNRASISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|116266144|gb|ABJ91310.1| 30S ribosomal protein S13 [Porphyra yezoensis]
          Length = 126

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + +   L + +V+ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT  NARTR+   K    +
Sbjct: 61  ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRINARTRRGGKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|121609263|ref|YP_997070.1| 30S ribosomal protein S13 [Verminephrobacter eiseniae EF01-2]
 gi|158706293|sp|A1WK95|RS13_VEREI RecName: Full=30S ribosomal protein S13
 gi|121553903|gb|ABM58052.1| SSU ribosomal protein S13P [Verminephrobacter eiseniae EF01-2]
          Length = 121

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC+   I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRNRARKICDASGIAYSKKIKDLTDGDLEKIRVQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           EQ + +EGDLRR   MNIKRLMD+GCYRG RHRRGLPVRGQRT TNARTRK   KG  A 
Sbjct: 61  EQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|328675429|gb|AEB28104.1| SSU ribosomal protein S13p (S18e) [Francisella cf. novicida 3523]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 1/119 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E +V  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQTCNVDPTVKIKDLSEDQVESLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK   K   A
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118


>gi|68249395|ref|YP_248507.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP]
 gi|145628306|ref|ZP_01784107.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21]
 gi|145630546|ref|ZP_01786326.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|145632158|ref|ZP_01787893.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655]
 gi|145634789|ref|ZP_01790497.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA]
 gi|145638399|ref|ZP_01794009.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII]
 gi|148826556|ref|YP_001291309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE]
 gi|148827988|ref|YP_001292741.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG]
 gi|229844667|ref|ZP_04464806.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1]
 gi|229845850|ref|ZP_04465962.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1]
 gi|260579891|ref|ZP_05847721.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW]
 gi|260581616|ref|ZP_05849413.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127]
 gi|319775266|ref|YP_004137754.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047]
 gi|319897706|ref|YP_004135903.1| 30S ribosomal subunit protein s13 [Haemophilus influenzae F3031]
 gi|81336178|sp|Q4QMA0|RS13_HAEI8 RecName: Full=30S ribosomal protein S13
 gi|158706235|sp|A5UDS5|RS13_HAEIE RecName: Full=30S ribosomal protein S13
 gi|158706236|sp|A5UHV2|RS13_HAEIG RecName: Full=30S ribosomal protein S13
 gi|68057594|gb|AAX87847.1| 30S ribosomal protein S13 [Haemophilus influenzae 86-028NP]
 gi|144980081|gb|EDJ89740.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.1-21]
 gi|144983936|gb|EDJ91378.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|144987065|gb|EDJ93595.1| 30S ribosomal protein S13 [Haemophilus influenzae 3655]
 gi|145267955|gb|EDK07951.1| 30S ribosomal protein S13 [Haemophilus influenzae PittAA]
 gi|145272728|gb|EDK12635.1| 30S ribosomal protein S13 [Haemophilus influenzae PittII]
 gi|148716716|gb|ABQ98926.1| 30S ribosomal protein S13 [Haemophilus influenzae PittEE]
 gi|148719230|gb|ABR00358.1| 30S ribosomal protein S13 [Haemophilus influenzae PittGG]
 gi|229810854|gb|EEP46571.1| 30S ribosomal protein S13 [Haemophilus influenzae 7P49H1]
 gi|229812381|gb|EEP48071.1| 30S ribosomal protein S13 [Haemophilus influenzae 6P18H1]
 gi|260093175|gb|EEW77108.1| 30S ribosomal protein S13 [Haemophilus influenzae RdAW]
 gi|260095209|gb|EEW79100.1| 30S ribosomal protein S13 [Haemophilus influenzae NT127]
 gi|301169518|emb|CBW29119.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae 10810]
 gi|309751539|gb|ADO81523.1| 30S ribosomal protein S13 [Haemophilus influenzae R2866]
 gi|309973709|gb|ADO96910.1| 30S ribosomal protein S13 [Haemophilus influenzae R2846]
 gi|317433212|emb|CBY81587.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3031]
 gi|317449857|emb|CBY86068.1| 30S ribosomal subunit protein S13 [Haemophilus influenzae F3047]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|120609323|ref|YP_969001.1| 30S ribosomal protein S13 [Acidovorax citrulli AAC00-1]
 gi|326315412|ref|YP_004233084.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|158706206|sp|A1TJT9|RS13_ACIAC RecName: Full=30S ribosomal protein S13
 gi|120587787|gb|ABM31227.1| SSU ribosomal protein S13P [Acidovorax citrulli AAC00-1]
 gi|323372248|gb|ADX44517.1| 30S ribosomal protein S13 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 121

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEACGIAYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|311896538|dbj|BAJ28946.1| putative ribosomal protein S13 [Kitasatospora setae KM-6054]
          Length = 126

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KR+  AL Y++GIG   +Q    +  +  + RV  + E +++++++ +
Sbjct: 1   MARLSGVDLPREKRIEIALTYVYGIGKTRAQLALAETGVSGDIRVRDISEDDLVKLQKFV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++VEGDLRR VA +I+R +++GCY GLRHRRGLPVRGQRTHTNARTRK   +    +
Sbjct: 61  DANFEVEGDLRRQVAADIRRKVEIGCYEGLRHRRGLPVRGQRTHTNARTRKGPRRAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|146313363|ref|YP_001178437.1| 30S ribosomal protein S13 [Enterobacter sp. 638]
 gi|145320239|gb|ABP62386.1| SSU ribosomal protein S13P [Enterobacter sp. 638]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVSMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|317013083|gb|ADU83691.1| 30S ribosomal protein S13 [Helicobacter pylori Lithuania75]
          Length = 120

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELNEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|315587185|gb|ADU41566.1| 30S ribosomal protein S13 [Helicobacter pylori 35A]
          Length = 120

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG K+S++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKNSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|261867276|ref|YP_003255198.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412608|gb|ACX81979.1| ribosomal protein S13p/S18e [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|301155352|emb|CBW14818.1| 30S ribosomal subunit protein S13 [Haemophilus parainfluenzae T3T1]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICAAAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|227538695|ref|ZP_03968744.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300770228|ref|ZP_07080107.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC
           33861]
 gi|227241614|gb|EEI91629.1| ribosomal protein S13 [Sphingobacterium spiritivorum ATCC 33300]
 gi|300762704|gb|EFK59521.1| 30S ribosomal protein S13 [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 125

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG +++  I +K  I  + +V    + ++  IR  I
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGRQTAAYILDKAGISEDVKVQDWNDDQLAAIRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             + +VEG LR  V +NIKRLMD+GCYRGLRHR+ LPVRGQRT  N RTRK   K    +
Sbjct: 61  NDELKVEGALRSEVQLNIKRLMDIGCYRGLRHRKHLPVRGQRTKNNTRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|284006141|emb|CBA71383.1| 30S ribosomal protein S13 [Arsenophonus nasoniae]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQSICAASGIAEHVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YIVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|197287090|ref|YP_002152962.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320]
 gi|194684577|emb|CAR46425.1| 30S ribosomal protein S13 [Proteus mirabilis HI4320]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|93005336|ref|YP_579773.1| 30S ribosomal protein S13 [Psychrobacter cryohalolentis K5]
 gi|122415888|sp|Q1QDG4|RS13_PSYCK RecName: Full=30S ribosomal protein S13
 gi|92393014|gb|ABE74289.1| SSU ribosomal protein S13P [Psychrobacter cryohalolentis K5]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/116 (55%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++Q I   + I P  +V QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTTAQKILEAVGIAPSTKVSQLDDTQLDAIRAQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK   + 
Sbjct: 61  AE-YMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPTRP 115


>gi|237742281|ref|ZP_04572762.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
 gi|256845560|ref|ZP_05551018.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
 gi|294785151|ref|ZP_06750439.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
 gi|229429929|gb|EEO40141.1| SSU ribosomal protein S13P [Fusobacterium sp. 4_1_13]
 gi|256719119|gb|EEU32674.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_36A2]
 gi|294486865|gb|EFG34227.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_27]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  +  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVKGPKKPI 116


>gi|224531523|ref|ZP_03672155.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116]
 gi|224510988|gb|EEF81394.1| ribosomal protein S13p/S18e [Borrelia valaisiana VS116]
          Length = 125

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 84/121 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CN+  I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNRSNISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|74316445|ref|YP_314185.1| 30S ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259]
 gi|91207631|sp|Q3SLM7|RS13_THIDA RecName: Full=30S ribosomal protein S13
 gi|74055940|gb|AAZ96380.1| ribosomal protein S13 [Thiobacillus denitrificans ATCC 25259]
          Length = 118

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V AL  I+GIG  +S  IC    I    ++  L E+E+ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHAVIALTAIYGIGRTTSGKICEAAGIAQTSKIKDLSEAEMERLREGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V MNIKRLMDLGCYRG RHR+GLPVRGQRT TNARTRK   K  
Sbjct: 61  SK-FTVEGDLRREVTMNIKRLMDLGCYRGFRHRKGLPVRGQRTRTNARTRKGPRKAI 116


>gi|237744172|ref|ZP_04574653.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
 gi|256027713|ref|ZP_05441547.1| 30S ribosomal protein S13 [Fusobacterium sp. D11]
 gi|260494242|ref|ZP_05814373.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
 gi|289765672|ref|ZP_06525050.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
 gi|229431401|gb|EEO41613.1| SSU ribosomal protein S13P [Fusobacterium sp. 7_1]
 gi|260198388|gb|EEW95904.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_33]
 gi|289717227|gb|EFD81239.1| SSU ribosomal protein S13P [Fusobacterium sp. D11]
          Length = 118

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  +  + RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGVNFDTRVKDLTEEEVNKIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQHSKTNARTVKGPKKPI 116


>gi|51598755|ref|YP_072943.1| 30S ribosomal protein S13 [Borrelia garinii PBi]
 gi|219684427|ref|ZP_03539371.1| ribosomal protein S13p/S18e [Borrelia garinii PBr]
 gi|219685178|ref|ZP_03539998.1| ribosomal protein S13p/S18e [Borrelia garinii Far04]
 gi|81609962|sp|Q661C0|RS13_BORGA RecName: Full=30S ribosomal protein S13
 gi|51573326|gb|AAU07351.1| ribosomal protein S13 [Borrelia garinii PBi]
 gi|219672416|gb|EED29469.1| ribosomal protein S13p/S18e [Borrelia garinii PBr]
 gi|219673274|gb|EED30293.1| ribosomal protein S13p/S18e [Borrelia garinii Far04]
          Length = 125

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|15900170|ref|NP_344774.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TIGR4]
 gi|15902257|ref|NP_357807.1| 30S ribosomal protein S13 [Streptococcus pneumoniae R6]
 gi|111658778|ref|ZP_01409409.1| hypothetical protein SpneT_02000075 [Streptococcus pneumoniae
           TIGR4]
 gi|116516047|ref|YP_815735.1| 30S ribosomal protein S13 [Streptococcus pneumoniae D39]
 gi|148983633|ref|ZP_01816952.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
 gi|148987971|ref|ZP_01819434.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
 gi|148992811|ref|ZP_01822454.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
 gi|148996656|ref|ZP_01824374.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
 gi|149005985|ref|ZP_01829714.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
 gi|149011104|ref|ZP_01832409.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
 gi|149017924|ref|ZP_01834383.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
 gi|168483871|ref|ZP_02708823.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00]
 gi|168485999|ref|ZP_02710507.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00]
 gi|168489711|ref|ZP_02713910.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195]
 gi|168492188|ref|ZP_02716331.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04]
 gi|168493928|ref|ZP_02718071.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06]
 gi|168576339|ref|ZP_02722222.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016]
 gi|169833118|ref|YP_001693765.1| 30S ribosomal protein S13 [Streptococcus pneumoniae Hungary19A-6]
 gi|182683211|ref|YP_001834958.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14]
 gi|221231136|ref|YP_002510288.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669]
 gi|225853839|ref|YP_002735351.1| 30S ribosomal protein S13 [Streptococcus pneumoniae JJA]
 gi|225855998|ref|YP_002737509.1| 30S ribosomal protein S13 [Streptococcus pneumoniae P1031]
 gi|225858087|ref|YP_002739597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae 70585]
 gi|237649699|ref|ZP_04523951.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974]
 gi|237821397|ref|ZP_04597242.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CCRI 1974M2]
 gi|270292024|ref|ZP_06198239.1| ribosomal protein S13 [Streptococcus sp. M143]
 gi|289168708|ref|YP_003446977.1| 30S ribosomal protein S13 [Streptococcus mitis B6]
 gi|293364324|ref|ZP_06611050.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|298230390|ref|ZP_06964071.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256011|ref|ZP_06979597.1| 30S ribosomal protein S13 [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502047|ref|YP_003723987.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A]
 gi|303255071|ref|ZP_07341147.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455]
 gi|303259285|ref|ZP_07345263.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293]
 gi|303261040|ref|ZP_07346989.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292]
 gi|303263368|ref|ZP_07349291.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397]
 gi|303265533|ref|ZP_07351433.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457]
 gi|303267909|ref|ZP_07353711.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458]
 gi|306825963|ref|ZP_07459299.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306828806|ref|ZP_07461998.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249]
 gi|307066911|ref|YP_003875877.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200]
 gi|307126452|ref|YP_003878483.1| 30S ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B]
 gi|307702709|ref|ZP_07639661.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|307704088|ref|ZP_07641017.1| 30S ribosomal protein S13 [Streptococcus mitis SK597]
 gi|307708083|ref|ZP_07644551.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261]
 gi|307709934|ref|ZP_07646381.1| 30S ribosomal protein S13 [Streptococcus mitis SK564]
 gi|307711032|ref|ZP_07647454.1| 30S ribosomal protein S13 [Streptococcus mitis SK321]
 gi|315612355|ref|ZP_07887268.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296]
 gi|322375016|ref|ZP_08049530.1| 30S ribosomal protein S13 [Streptococcus sp. C300]
 gi|322377207|ref|ZP_08051699.1| 30S ribosomal protein S13 [Streptococcus sp. M334]
 gi|331267111|ref|YP_004326741.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5]
 gi|54039354|sp|P66393|RS13_STRR6 RecName: Full=30S ribosomal protein S13
 gi|54042125|sp|P66392|RS13_STRPN RecName: Full=30S ribosomal protein S13
 gi|122279379|sp|Q04ML3|RS13_STRP2 RecName: Full=30S ribosomal protein S13
 gi|226712791|sp|B1I8M2|RS13_STRPI RecName: Full=30S ribosomal protein S13
 gi|226712792|sp|B2IS65|RS13_STRPS RecName: Full=30S ribosomal protein S13
 gi|254811167|sp|C1CAN6|RS13_STRP7 RecName: Full=30S ribosomal protein S13
 gi|254811168|sp|B8ZKQ3|RS13_STRPJ RecName: Full=30S ribosomal protein S13
 gi|254811170|sp|C1CC30|RS13_STRZJ RecName: Full=30S ribosomal protein S13
 gi|254811171|sp|C1CIC1|RS13_STRZP RecName: Full=30S ribosomal protein S13
 gi|14971703|gb|AAK74414.1| ribosomal protein S13 [Streptococcus pneumoniae TIGR4]
 gi|15457758|gb|AAK99017.1| 30S Ribosomal protein S13 [Streptococcus pneumoniae R6]
 gi|116076623|gb|ABJ54343.1| ribosomal protein S13 [Streptococcus pneumoniae D39]
 gi|147757231|gb|EDK64270.1| ribosomal protein S13 [Streptococcus pneumoniae SP11-BS70]
 gi|147762341|gb|EDK69302.1| ribosomal protein S13 [Streptococcus pneumoniae SP18-BS74]
 gi|147764740|gb|EDK71670.1| ribosomal protein S13 [Streptococcus pneumoniae SP19-BS75]
 gi|147923780|gb|EDK74892.1| ribosomal protein S13 [Streptococcus pneumoniae SP3-BS71]
 gi|147926435|gb|EDK77508.1| ribosomal protein S13 [Streptococcus pneumoniae SP6-BS73]
 gi|147928537|gb|EDK79552.1| ribosomal protein S13 [Streptococcus pneumoniae SP9-BS68]
 gi|147931488|gb|EDK82466.1| ribosomal protein S13 [Streptococcus pneumoniae SP23-BS72]
 gi|168995620|gb|ACA36232.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae Hungary19A-6]
 gi|172042881|gb|EDT50927.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1873-00]
 gi|182628545|gb|ACB89493.1| 30S ribosomal protein S13 [Streptococcus pneumoniae CGSP14]
 gi|183570892|gb|EDT91420.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC1087-00]
 gi|183571844|gb|EDT92372.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae SP195]
 gi|183573602|gb|EDT94130.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC0288-04]
 gi|183576250|gb|EDT96778.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae CDC3059-06]
 gi|183577820|gb|EDT98348.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae MLV-016]
 gi|220673596|emb|CAR68082.1| 30S ribosomal protein S13 [Streptococcus pneumoniae ATCC 700669]
 gi|225720993|gb|ACO16847.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 70585]
 gi|225723327|gb|ACO19180.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae JJA]
 gi|225725374|gb|ACO21226.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae P1031]
 gi|270279552|gb|EFA25394.1| ribosomal protein S13 [Streptococcus sp. M143]
 gi|288908275|emb|CBJ23117.1| 30S ribosomal protein S13 [Streptococcus mitis B6]
 gi|291317170|gb|EFE57597.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|298237642|gb|ADI68773.1| 30S ribosomal protein S13 [Streptococcus pneumoniae TCH8431/19A]
 gi|301793505|emb|CBW35878.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV104]
 gi|301799381|emb|CBW31916.1| 30S ribosomal protein S13 [Streptococcus pneumoniae OXC141]
 gi|301801176|emb|CBW33849.1| 30S ribosomal protein S13 [Streptococcus pneumoniae INV200]
 gi|302597901|gb|EFL64971.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS455]
 gi|302637877|gb|EFL68363.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP14-BS292]
 gi|302639703|gb|EFL70160.1| 30S ribosomal protein S13 [Streptococcus pneumoniae SP-BS293]
 gi|302642605|gb|EFL72950.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS458]
 gi|302644973|gb|EFL75220.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS457]
 gi|302647141|gb|EFL77365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae BS397]
 gi|304428984|gb|EFM32072.1| 30S ribosomal protein S13 [Streptococcus mitis ATCC 6249]
 gi|304431679|gb|EFM34659.1| 30S ribosomal protein S13 [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|306408448|gb|ADM83875.1| hypothetical protein SPAP_0282 [Streptococcus pneumoniae AP200]
 gi|306483514|gb|ADM90383.1| ribosomal protein S13p/S18e [Streptococcus pneumoniae 670-6B]
 gi|307615868|gb|EFN95073.1| ribosomal protein S13p/S18e [Streptococcus mitis NCTC 12261]
 gi|307616994|gb|EFN96172.1| 30S ribosomal protein S13 [Streptococcus mitis SK321]
 gi|307619305|gb|EFN98434.1| 30S ribosomal protein S13 [Streptococcus mitis SK564]
 gi|307622378|gb|EFO01386.1| 30S ribosomal protein S13 [Streptococcus mitis SK597]
 gi|307623825|gb|EFO02810.1| 30S ribosomal protein S13 [Streptococcus oralis ATCC 35037]
 gi|315315336|gb|EFU63375.1| 30S ribosomal protein S13 [Streptococcus sanguinis ATCC 49296]
 gi|321280516|gb|EFX57555.1| 30S ribosomal protein S13 [Streptococcus sp. C300]
 gi|321281920|gb|EFX58928.1| 30S ribosomal protein S13 [Streptococcus sp. M334]
 gi|326683783|emb|CBZ01401.1| 30S ribosomal protein S13 [Streptococcus oralis Uo5]
 gi|327390651|gb|EGE88991.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA04375]
 gi|332075898|gb|EGI86365.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17570]
 gi|332077534|gb|EGI87995.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA41301]
          Length = 121

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|328949255|ref|YP_004366592.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489]
 gi|328449579|gb|AEB15295.1| 30S ribosomal protein S13 [Treponema succinifaciens DSM 2489]
          Length = 122

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL Y++GIG  S+  IC    + P   ++ L E ++ ++R+ I
Sbjct: 1   MARIAGVDLP-NKHVNIALTYVYGIGRSSANKICEATNVDPHAHLNDLSEDDLTKLRKYI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           +++++ EG LR  + +NIKRLMD+G YRGLRHR+GLP RGQRT TN+RTRK 
Sbjct: 60  DENFKTEGRLRSEIGLNIKRLMDIGSYRGLRHRKGLPCRGQRTRTNSRTRKG 111


>gi|320108371|ref|YP_004183961.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4]
 gi|319926892|gb|ADV83967.1| 30S ribosomal protein S13 [Terriglobus saanensis SP1PR4]
          Length = 126

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+   AL YI GIG   +  I  K  I P R++  L E E+ +IRQ I
Sbjct: 1   MARIAGVDLPNNKQAKIALTYIFGIGDPRALSILKKADIDPIRKMQTLDEDELNKIRQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +  +EGDLR+ +++NIKRL+++  YRGLRHRR LPVRGQRTHTNARTRK   KG VA 
Sbjct: 61  EAEGGIEGDLRKDISLNIKRLIEIQSYRGLRHRRNLPVRGQRTHTNARTRKGPRKGTVAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307720210|ref|YP_003891350.1| 30S ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294]
 gi|306978303|gb|ADN08338.1| SSU ribosomal protein S13P [Sulfurimonas autotrophica DSM 16294]
          Length = 120

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/119 (53%), Positives = 84/119 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L YI+GIG  +++ I +   I   +RV +L E +V  I + I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYIYGIGLHTARQILDATGIDYNKRVFELNEEDVAAITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK   K   A
Sbjct: 61  RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119


>gi|149371652|ref|ZP_01891068.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49]
 gi|149355279|gb|EDM43839.1| 30S ribosomal protein S13 [unidentified eubacterium SCB49]
          Length = 124

 Score =  168 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   S+ I  K  +  +++V++  + E+  IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGNSRSKAILEKAGVSEDKKVNEWNDEEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GS-FTIEGELRSEVQLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|5163228|gb|AAD40607.1|AF115283_26 ribosomal protein S13 [Leptospira interrogans]
          Length = 125

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG   S+ I  K  I    RV  L ES+   IR+ +
Sbjct: 1   MARIAGIDLPREKRIVVGLTYIFGIGNSLSKLILKKAGIDESIRVKDLNESQEAAIRKTL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+  +VEGDLR  + +NIKRLMD+GCYRGLRHRRGLPV GQRT TNARTRK   K    +
Sbjct: 61  EETAKVEGDLRSEIRLNIKRLMDIGCYRGLRHRRGLPVNGQRTRTNARTRKGGKKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|31544834|ref|NP_853412.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)]
 gi|26399325|sp|Q9RDV8|RS13_MYCGA RecName: Full=30S ribosomal protein S13
 gi|6601580|gb|AAF19041.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum]
 gi|31541680|gb|AAP56980.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(low)]
 gi|284930908|gb|ADC30847.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. R(high)]
 gi|284931664|gb|ADC31602.1| 30S ribosomal protein S13 [Mycoplasma gallisepticum str. F]
          Length = 124

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KRV  +L YI+GIG   +Q+I  K  I   +RV  L + E+  IR  +
Sbjct: 1   MARILGIDIPNNKRVEISLTYIYGIGKPRAQEILRKAKIDFNKRVKDLSDEELALIRS-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y +EGDLRR VA+NIKRLM++G Y GLRHRRGLPVRGQRT +NARTRK   K    +
Sbjct: 60  ASTYVLEGDLRRDVALNIKRLMEVGSYAGLRHRRGLPVRGQRTKSNARTRKGPRKTVANK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|313677143|ref|YP_004055139.1| SSU ribosomal protein s13p [Marivirga tractuosa DSM 4126]
 gi|312943841|gb|ADR23031.1| SSU ribosomal protein S13P [Marivirga tractuosa DSM 4126]
          Length = 125

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV+IP  KR V +L YI G+G  SS  I     +  +++V    + E   IR  I
Sbjct: 1   MARVSGVDIPDNKRGVISLTYIFGLGKSSSAKILEMAGVDADKKVSDWTDDEANSIRTVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++++ EG L+  V M+IKRL+D+GCYRGLRHR+GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SENFKTEGVLKSEVQMSIKRLLDIGCYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|237739948|ref|ZP_04570429.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31]
 gi|262066973|ref|ZP_06026585.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
 gi|294782960|ref|ZP_06748286.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
 gi|229421965|gb|EEO37012.1| SSU ribosomal protein S13P [Fusobacterium sp. 2_1_31]
 gi|291379321|gb|EFE86839.1| 30S ribosomal protein S13 [Fusobacterium periodonticum ATCC 33693]
 gi|294481601|gb|EFG29376.1| 30S ribosomal protein S13 [Fusobacterium sp. 1_1_41FAA]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGRPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|16762865|ref|NP_458482.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144352|ref|NP_807694.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052886|ref|ZP_03345764.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425773|ref|ZP_03358523.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213580695|ref|ZP_03362521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213856917|ref|ZP_03384157.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824203|ref|ZP_06543798.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25009165|sp|Q8Z1X6|RS13_SALTI RecName: Full=30S ribosomal protein S13
 gi|25294720|pir||AG1008 30S ribosomal chain protein S13 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16505172|emb|CAD09168.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139990|gb|AAO71554.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 116


>gi|170718271|ref|YP_001785289.1| 30S ribosomal protein S13 [Haemophilus somnus 2336]
 gi|168826400|gb|ACA31771.1| ribosomal protein S13 [Haemophilus somnus 2336]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|86739320|ref|YP_479720.1| 30S ribosomal protein S13 [Frankia sp. CcI3]
 gi|123724242|sp|Q2JFF1|RS13_FRASC RecName: Full=30S ribosomal protein S13
 gi|86566182|gb|ABD09991.1| SSU ribosomal protein S13P [Frankia sp. CcI3]
          Length = 126

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 83/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV  AL YI GIG   S+D     A+ P+ RV  L E E++++R  I
Sbjct: 1   MARLSGVDLPREKRVEIALTYIFGIGRSRSRDTLAATAVNPDTRVRDLSEEEIVRLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + +Y+VEGDL R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|257440243|ref|ZP_05615998.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165]
 gi|257197277|gb|EEU95561.1| 30S ribosomal protein S13 [Faecalibacterium prausnitzii A2-165]
          Length = 130

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 8   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 67

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART K   +    
Sbjct: 68  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 127

Query: 120 RKR 122
           +K+
Sbjct: 128 KKK 130


>gi|330997341|ref|ZP_08321192.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841]
 gi|329570715|gb|EGG52431.1| 30S ribosomal protein S13 [Paraprevotella xylaniphila YIT 11841]
          Length = 126

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I  K  +  + +V    + +   IR  
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILAKAGVDKDIKVKDWTDEQASNIRAV 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +Y+VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEYKVEGDLRAEIQLNIKRLMDIGCYRGVRHRLGLPVRGQSTKNNARTRKG 113


>gi|145640898|ref|ZP_01796480.1| 30S ribosomal protein S13 [Haemophilus influenzae R3021]
 gi|145274412|gb|EDK14276.1| 30S ribosomal protein S13 [Haemophilus influenzae 22.4-21]
          Length = 122

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|119773376|ref|YP_926116.1| 30S ribosomal protein S13 [Shewanella amazonensis SB2B]
 gi|158706275|sp|A1S240|RS13_SHEAM RecName: Full=30S ribosomal protein S13
 gi|119765876|gb|ABL98446.1| SSU ribosomal protein S13P [Shewanella amazonensis SB2B]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC   AI  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGRTRAKAICAATAIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|262377290|ref|ZP_06070514.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145]
 gi|262307743|gb|EEY88882.1| 30S ribosomal protein S13 [Acinetobacter lwoffii SH145]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +S+ I     I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTSKAILAAAGIAPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|73748341|ref|YP_307580.1| 30S ribosomal protein S13 [Dehalococcoides sp. CBDB1]
 gi|147669121|ref|YP_001213939.1| 30S ribosomal protein S13 [Dehalococcoides sp. BAV1]
 gi|289432389|ref|YP_003462262.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT]
 gi|91207700|sp|Q3ZZP9|RS13_DEHSC RecName: Full=30S ribosomal protein S13
 gi|189040501|sp|A5FRW9|RS13_DEHSB RecName: Full=30S ribosomal protein S13
 gi|73660057|emb|CAI82664.1| ribosomal protein S13 [Dehalococcoides sp. CBDB1]
 gi|146270069|gb|ABQ17061.1| SSU ribosomal protein S13P [Dehalococcoides sp. BAV1]
 gi|288946109|gb|ADC73806.1| 30S ribosomal protein S13 [Dehalococcoides sp. GT]
          Length = 129

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/120 (48%), Positives = 84/120 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKTIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLR+ + +NIKRL+D+GCYRG+RH+  LPVRGQRT TNARTR+   K    R
Sbjct: 61  DKEYRVEGDLRKEITLNIKRLIDIGCYRGIRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120


>gi|331703692|ref|YP_004400379.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256384359|gb|ACU78929.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256385191|gb|ACU79760.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455858|gb|ADH22093.1| 30S ribosomal protein S13 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328802247|emb|CBW54401.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K   K    +
Sbjct: 61  SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|83720972|ref|YP_443549.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264]
 gi|167582600|ref|ZP_02375474.1| 30S ribosomal protein S13 [Burkholderia thailandensis TXDOH]
 gi|167620714|ref|ZP_02389345.1| 30S ribosomal protein S13 [Burkholderia thailandensis Bt4]
 gi|257137665|ref|ZP_05585927.1| 30S ribosomal protein S13 [Burkholderia thailandensis E264]
 gi|123536224|sp|Q2SU50|RS13_BURTA RecName: Full=30S ribosomal protein S13
 gi|83654797|gb|ABC38860.1| ribosomal protein S13p/S18e [Burkholderia thailandensis E264]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I GIG   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGIGRTRARSICVASGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|228989343|ref|ZP_04149334.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442]
 gi|228995526|ref|ZP_04155194.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17]
 gi|229003151|ref|ZP_04160997.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4]
 gi|228758114|gb|EEM07313.1| 30S ribosomal protein S13 [Bacillus mycoides Rock1-4]
 gi|228764255|gb|EEM13134.1| 30S ribosomal protein S13 [Bacillus mycoides Rock3-17]
 gi|228770421|gb|EEM18994.1| 30S ribosomal protein S13 [Bacillus pseudomycoides DSM 12442]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-VKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|315122796|ref|YP_004063285.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496198|gb|ADR52797.1| 30S ribosomal protein S13 [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 123

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 103/123 (83%), Positives = 108/123 (87%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  KRVVRALCYIHGIGFKSSQDICNKL I PERRVH LVESE+I+IRQAI
Sbjct: 1   MARIAGVNIPSTKRVVRALCYIHGIGFKSSQDICNKLGISPERRVHHLVESEIIKIRQAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA- 119
           EQ YQVEGDLRR   MNIKRLMDLGCYRGLRHRR LPVRGQRT TNA TRK+ GKGG + 
Sbjct: 61  EQTYQVEGDLRRMTVMNIKRLMDLGCYRGLRHRRNLPVRGQRTRTNACTRKRSGKGGGSV 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|330815272|ref|YP_004358977.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3]
 gi|327367665|gb|AEA59021.1| 30S ribosomal protein S13 [Burkholderia gladioli BSR3]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I G+G   ++ IC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIFGVGRTRARSICVAAGVEFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  GK-FVVEGDLRREVTMNIKRLMDLGCYRGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|186477564|ref|YP_001859034.1| 30S ribosomal protein S13 [Burkholderia phymatum STM815]
 gi|209521363|ref|ZP_03270076.1| ribosomal protein S13 [Burkholderia sp. H160]
 gi|295677909|ref|YP_003606433.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002]
 gi|226712708|sp|B2JI42|RS13_BURP8 RecName: Full=30S ribosomal protein S13
 gi|184194023|gb|ACC71988.1| ribosomal protein S13 [Burkholderia phymatum STM815]
 gi|209498183|gb|EDZ98325.1| ribosomal protein S13 [Burkholderia sp. H160]
 gi|295437752|gb|ADG16922.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1002]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+GIG   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   + 
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15594845|ref|NP_212634.1| 30S ribosomal protein S13 [Borrelia burgdorferi B31]
 gi|195941637|ref|ZP_03087019.1| 30S ribosomal protein S13 [Borrelia burgdorferi 80a]
 gi|216264479|ref|ZP_03436471.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a]
 gi|218249265|ref|YP_002375010.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7]
 gi|223888816|ref|ZP_03623407.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b]
 gi|226320981|ref|ZP_03796526.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805]
 gi|226321810|ref|ZP_03797336.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26]
 gi|3914889|sp|O51453|RS13_BORBU RecName: Full=30S ribosomal protein S13
 gi|226712698|sp|B7J265|RS13_BORBZ RecName: Full=30S ribosomal protein S13
 gi|2688391|gb|AAC66842.1| ribosomal protein S13 (rpsM) [Borrelia burgdorferi B31]
 gi|215980952|gb|EEC21759.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 156a]
 gi|218164453|gb|ACK74514.1| ribosomal protein S13p/S18e [Borrelia burgdorferi ZS7]
 gi|223885632|gb|EEF56731.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 64b]
 gi|226232999|gb|EEH31752.1| ribosomal protein S13p/S18e [Borrelia burgdorferi Bol26]
 gi|226233582|gb|EEH32318.1| ribosomal protein S13p/S18e [Borrelia burgdorferi 29805]
 gi|312149489|gb|ADQ29560.1| ribosomal protein S13p/S18e [Borrelia burgdorferi N40]
          Length = 125

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 85/121 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK +I P +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPNNKQLKIALTSIYGIGRTRALEVCNKSSISPSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYIVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|111115329|ref|YP_709947.1| 30S ribosomal protein S13 [Borrelia afzelii PKo]
 gi|122956352|sp|Q0SN07|RS13_BORAP RecName: Full=30S ribosomal protein S13
 gi|110890603|gb|ABH01771.1| ribosomal protein S13 [Borrelia afzelii PKo]
          Length = 125

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 83/121 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P  K++  AL  I+GIG   + ++CNK  I   +    L   EV ++R+ I
Sbjct: 1   MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISSSKIAKDLDNDEVNRLRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEG LR  VAM+IKRLMD+ CYRG+RHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|42779216|ref|NP_976463.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10987]
 gi|152973981|ref|YP_001373498.1| 30S ribosomal protein S13 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|217957710|ref|YP_002336254.1| 30S ribosomal protein S13 [Bacillus cereus AH187]
 gi|222093905|ref|YP_002527955.1| 30S ribosomal protein s13 [Bacillus cereus Q1]
 gi|229136981|ref|ZP_04265608.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26]
 gi|229194525|ref|ZP_04321328.1| 30S ribosomal protein S13 [Bacillus cereus m1293]
 gi|81411360|sp|Q73F71|RS13_BACC1 RecName: Full=30S ribosomal protein S13
 gi|189040490|sp|A7GK45|RS13_BACCN RecName: Full=30S ribosomal protein S13
 gi|226712694|sp|B7HQW9|RS13_BACC7 RecName: Full=30S ribosomal protein S13
 gi|254811129|sp|B9IZL9|RS13_BACCQ RecName: Full=30S ribosomal protein S13
 gi|42735131|gb|AAS39071.1| ribosomal protein S13 [Bacillus cereus ATCC 10987]
 gi|152022733|gb|ABS20503.1| ribosomal protein S13 [Bacillus cytotoxicus NVH 391-98]
 gi|217063520|gb|ACJ77770.1| ribosomal protein S13 [Bacillus cereus AH187]
 gi|221237953|gb|ACM10663.1| ribosomal protein S13 [Bacillus cereus Q1]
 gi|228588991|gb|EEK47006.1| 30S ribosomal protein S13 [Bacillus cereus m1293]
 gi|228646519|gb|EEL02726.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST26]
 gi|324324126|gb|ADY19386.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGVSEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|251793848|ref|YP_003008580.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700]
 gi|247535247|gb|ACS98493.1| ribosomal protein S13p/S18e [Aggregatibacter aphrophilus NJ8700]
          Length = 118

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKSICASAGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|297582475|ref|YP_003698255.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10]
 gi|297140932|gb|ADH97689.1| 30S ribosomal protein S13 [Bacillus selenitireducens MLS10]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRVV +L Y+ GIG   +  I  +  +    RV  L E E+ +IR+ +
Sbjct: 1   MARVAGVDIPRDKRVVVSLTYVFGIGRSKAAQILTEAGVSENTRVRDLTEDELAKIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ+T  NARTRK   +    +
Sbjct: 61  D-GVKVEGDLRREVSLNIKRLIEIGSYRGIRHRRGLPVRGQKTKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|229074196|ref|ZP_04207242.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18]
 gi|229094857|ref|ZP_04225862.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29]
 gi|229100934|ref|ZP_04231738.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28]
 gi|229113811|ref|ZP_04243246.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3]
 gi|228669682|gb|EEL25089.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-3]
 gi|228682513|gb|EEL36586.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-28]
 gi|228688600|gb|EEL42473.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-29]
 gi|228708966|gb|EEL61093.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-18]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|160896492|ref|YP_001562074.1| 30S ribosomal protein S13 [Delftia acidovorans SPH-1]
 gi|226712728|sp|A9BRX2|RS13_DELAS RecName: Full=30S ribosomal protein S13
 gi|160362076|gb|ABX33689.1| ribosomal protein S13 [Delftia acidovorans SPH-1]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG  +++ IC    I   +++ +L + ++ +IR  +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIYGIGRTTARKICEAAGIAYSKKIKELTDGDLEKIRDQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  TS-LTLEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|332040530|gb|EGI76906.1| 30S ribosomal protein S13 [Hylemonella gracilis ATCC 19624]
          Length = 121

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    IP  ++V  L +++  +IR  I
Sbjct: 1   MARIAGINIPPHQHTEIGLTAIFGIGRTRARKICVACGIPFSKKVKDLTDADQEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG+RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGMRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|312889343|ref|ZP_07748897.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603]
 gi|311298220|gb|EFQ75335.1| SSU ribosomal protein S13P [Mucilaginibacter paludis DSM 18603]
          Length = 125

 Score =  168 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR    L YI GIG  ++QDI  +  I    +V    + ++  IR  I
Sbjct: 1   MARIAGIDLPKNKRGEIGLTYIFGIGRSTAQDILTEAGIDFNTKVQDWTDEQLTSIRGII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  +VEG LR  V +NIKRLMD+GCYRG RHR+GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  NERIKVEGALRSEVQLNIKRLMDIGCYRGTRHRKGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|229821595|ref|YP_002883121.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333]
 gi|259494668|sp|C5C0G3|RS13_BEUC1 RecName: Full=30S ribosomal protein S13
 gi|229567508|gb|ACQ81359.1| ribosomal protein S13 [Beutenbergia cavernae DSM 12333]
          Length = 126

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+G+G   + D      I P+ RV  L ++E++ +R  +
Sbjct: 1   MARLVGVDLPRDKRLEVALTYIYGVGRTRAADTLKATGISPDLRVKDLGDAEIVALRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR VA +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  EGNYKIEGDLRREVAADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|261400074|ref|ZP_05986199.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970]
 gi|313667463|ref|YP_004047747.1| 30S ribosomal protein S13 [Neisseria lactamica ST-640]
 gi|269210299|gb|EEZ76754.1| 30S ribosomal protein S13 [Neisseria lactamica ATCC 23970]
 gi|309379137|emb|CBX22268.1| 30S ribosomal protein S13 [Neisseria lactamica Y92-1009]
 gi|313004925|emb|CBN86351.1| 30S ribosomal protein S13 [Neisseria lactamica 020-06]
          Length = 120

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP    +V  +  I+GIG   ++ IC    I P  +   L E+++  +R+ +
Sbjct: 1   MARIAGVNIPNNAHIVIGIQAIYGIGAARAKLICEAANIAPTTKAKDLDEAQLDALREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEGDLRR V M+IKRL+D+GCYRG RHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  AK-YEVEGDLRREVTMSIKRLIDMGCYRGFRHRRGLPCRGQRTRTNARTRKGPRKAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|109946780|ref|YP_664008.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba]
 gi|123173598|sp|Q17ZB7|RS13_HELAH RecName: Full=30S ribosomal protein S13
 gi|109714001|emb|CAJ99009.1| 30S ribosomal protein S13 [Helicobacter acinonychis str. Sheeba]
 gi|307637967|gb|ADN80417.1| SSU ribosomal protein S13p:S18e [Helicobacter pylori 908]
 gi|325996572|gb|ADZ51977.1| 30S ribosomal protein S13 [Helicobacter pylori 2018]
 gi|325998162|gb|ADZ50370.1| 30S ribosomal protein S13 [Helicobacter pylori 2017]
          Length = 120

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 87/120 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS++I   + I  ++RVH+L E E   I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSREILEAVGISFDKRVHELSEDEASSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|13357815|ref|NP_078089.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971971|ref|ZP_02554248.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|168282409|ref|ZP_02690076.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|168308562|ref|ZP_02691237.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|170762081|ref|YP_001752338.1| 30S ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|32363424|sp|Q9PQN6|RS13_UREPA RecName: Full=30S ribosomal protein S13
 gi|189044304|sp|B1AIP4|RS13_UREP2 RecName: Full=30S ribosomal protein S13
 gi|11276601|pir||H82917 ribosomal protein S13 UU255 [imported] - Ureaplasma urealyticum
 gi|6899225|gb|AAF30664.1|AE002122_33 ribosomal protein S13 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827658|gb|ACA32920.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902711|gb|EDT49000.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675722|gb|EDT87627.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700675|gb|EDU18957.1| ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 132

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/128 (54%), Positives = 85/128 (66%), Gaps = 7/128 (5%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57
           MARI GV+IP  KRVV +L YI GIG  +SQ I     I    RV  L + ++ +IR   
Sbjct: 1   MARILGVDIPNDKRVVISLTYIFGIGKSTSQQILKLANIDENIRVKDLADEQIAEIRRVA 60

Query: 58  ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
               +A  +  Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK  
Sbjct: 61  LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120

Query: 114 GKGGVARK 121
            K    +K
Sbjct: 121 RKTVANKK 128


>gi|256380570|ref|YP_003104230.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827]
 gi|255924873|gb|ACU40384.1| ribosomal protein S13 [Actinosynnema mirum DSM 43827]
          Length = 126

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S+++     I P+ RV  L + ++ ++R  I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIFGIGRTRSKELLKATEISPDLRVKDLGDDDLAKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E+ +++EGDLRR +  +I+R M++GCY GLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  EEHFKLEGDLRREIQADIRRKMEIGCYEGLRHRRNLPVRGQRTKTNARTRKGPKKTV 117


>gi|254302863|ref|ZP_04970221.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323055|gb|EDK88305.1| ribosomal protein S13 [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 118

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +D +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -KDIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|30018404|ref|NP_830035.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 14579]
 gi|30260326|ref|NP_842703.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames]
 gi|47525391|ref|YP_016740.1| 30S ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183169|ref|YP_026421.1| 30S ribosomal protein S13 [Bacillus anthracis str. Sterne]
 gi|49481683|ref|YP_034486.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145084|ref|YP_081745.1| 30S ribosomal protein S13 [Bacillus cereus E33L]
 gi|118475903|ref|YP_893054.1| 30S ribosomal protein S13 [Bacillus thuringiensis str. Al Hakam]
 gi|206972311|ref|ZP_03233258.1| 30S ribosomal protein S13 [Bacillus cereus AH1134]
 gi|218234072|ref|YP_002364984.1| 30S ribosomal protein S13 [Bacillus cereus B4264]
 gi|218901340|ref|YP_002449174.1| ribosomal protein S13 [Bacillus cereus AH820]
 gi|225862187|ref|YP_002747565.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102]
 gi|227812808|ref|YP_002812817.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684]
 gi|228912874|ref|ZP_04076521.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228919085|ref|ZP_04082464.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228925388|ref|ZP_04088484.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931637|ref|ZP_04094543.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943940|ref|ZP_04106325.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228950683|ref|ZP_04112817.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228956576|ref|ZP_04118372.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228983390|ref|ZP_04143603.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229041040|ref|ZP_04189803.1| 30S ribosomal protein S13 [Bacillus cereus AH676]
 gi|229067900|ref|ZP_04201217.1| 30S ribosomal protein S13 [Bacillus cereus F65185]
 gi|229089266|ref|ZP_04220547.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42]
 gi|229107821|ref|ZP_04237457.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15]
 gi|229119797|ref|ZP_04249058.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201]
 gi|229125652|ref|ZP_04254684.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4]
 gi|229142941|ref|ZP_04271382.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24]
 gi|229148544|ref|ZP_04276800.1| 30S ribosomal protein S13 [Bacillus cereus m1550]
 gi|229153913|ref|ZP_04282043.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342]
 gi|229176735|ref|ZP_04304139.1| 30S ribosomal protein S13 [Bacillus cereus 172560W]
 gi|229182529|ref|ZP_04309780.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1]
 gi|229188420|ref|ZP_04315468.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876]
 gi|229602339|ref|YP_002864786.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248]
 gi|254686634|ref|ZP_05150493.1| 30S ribosomal protein S13 [Bacillus anthracis str. CNEVA-9066]
 gi|254726286|ref|ZP_05188068.1| 30S ribosomal protein S13 [Bacillus anthracis str. A1055]
 gi|254735291|ref|ZP_05192999.1| 30S ribosomal protein S13 [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739483|ref|ZP_05197181.1| 30S ribosomal protein S13 [Bacillus anthracis str. Kruger B]
 gi|254751245|ref|ZP_05203283.1| 30S ribosomal protein S13 [Bacillus anthracis str. Vollum]
 gi|254756846|ref|ZP_05208874.1| 30S ribosomal protein S13 [Bacillus anthracis str. Australia 94]
 gi|296500968|ref|YP_003662668.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171]
 gi|300119552|ref|ZP_07057096.1| 30S ribosomal protein S13 [Bacillus cereus SJ1]
 gi|301051872|ref|YP_003790083.1| 30S ribosomal protein S13 [Bacillus anthracis CI]
 gi|49065839|sp|P62175|RS13_BACCR RecName: Full=30S ribosomal protein S13
 gi|49065840|sp|P62176|RS13_BACAN RecName: Full=30S ribosomal protein S13
 gi|81397477|sp|Q6HPN4|RS13_BACHK RecName: Full=30S ribosomal protein S13
 gi|81689825|sp|Q63H66|RS13_BACCZ RecName: Full=30S ribosomal protein S13
 gi|158706335|sp|A0R8K4|RS13_BACAH RecName: Full=30S ribosomal protein S13
 gi|226712691|sp|B7JKE5|RS13_BACC0 RecName: Full=30S ribosomal protein S13
 gi|226712693|sp|B7HJ73|RS13_BACC4 RecName: Full=30S ribosomal protein S13
 gi|254811126|sp|C3P9T0|RS13_BACAA RecName: Full=30S ribosomal protein S13
 gi|254811127|sp|C3LJW9|RS13_BACAC RecName: Full=30S ribosomal protein S13
 gi|254811128|sp|C1ET64|RS13_BACC3 RecName: Full=30S ribosomal protein S13
 gi|29893944|gb|AAP07236.1| SSU ribosomal protein S13P [Bacillus cereus ATCC 14579]
 gi|30253647|gb|AAP24189.1| 30S ribosomal protein S13 [Bacillus anthracis str. Ames]
 gi|47500539|gb|AAT29215.1| ribosomal protein S13 [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177096|gb|AAT52472.1| ribosomal protein S13 [Bacillus anthracis str. Sterne]
 gi|49333239|gb|AAT63885.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978553|gb|AAU20103.1| ribosomal protein S13 (30S ribosomal protein S13) [Bacillus cereus
           E33L]
 gi|118415128|gb|ABK83547.1| SSU ribosomal protein S13P [Bacillus thuringiensis str. Al Hakam]
 gi|206732885|gb|EDZ50060.1| 30S ribosomal protein S13 [Bacillus cereus AH1134]
 gi|218162029|gb|ACK62021.1| ribosomal protein S13 [Bacillus cereus B4264]
 gi|218535885|gb|ACK88283.1| ribosomal protein S13 [Bacillus cereus AH820]
 gi|225787084|gb|ACO27301.1| 30S ribosomal protein S13 [Bacillus cereus 03BB102]
 gi|227003895|gb|ACP13638.1| 30S ribosomal protein S13 [Bacillus anthracis str. CDC 684]
 gi|228595094|gb|EEK52865.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 10876]
 gi|228600984|gb|EEK58553.1| 30S ribosomal protein S13 [Bacillus cereus BGSC 6E1]
 gi|228606778|gb|EEK64195.1| 30S ribosomal protein S13 [Bacillus cereus 172560W]
 gi|228629594|gb|EEK86291.1| 30S ribosomal protein S13 [Bacillus cereus ATCC 4342]
 gi|228634960|gb|EEK91533.1| 30S ribosomal protein S13 [Bacillus cereus m1550]
 gi|228640562|gb|EEK96951.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST24]
 gi|228657844|gb|EEL13650.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-Cer4]
 gi|228663698|gb|EEL19277.1| 30S ribosomal protein S13 [Bacillus cereus 95/8201]
 gi|228675670|gb|EEL30878.1| 30S ribosomal protein S13 [Bacillus cereus Rock1-15]
 gi|228694105|gb|EEL47787.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-42]
 gi|228715259|gb|EEL67118.1| 30S ribosomal protein S13 [Bacillus cereus F65185]
 gi|228727337|gb|EEL78531.1| 30S ribosomal protein S13 [Bacillus cereus AH676]
 gi|228776380|gb|EEM24733.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228803141|gb|EEM49963.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809034|gb|EEM55519.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228815773|gb|EEM62009.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828065|gb|EEM73793.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834310|gb|EEM79851.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228840610|gb|EEM85872.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228846810|gb|EEM91815.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229266747|gb|ACQ48384.1| 30S ribosomal protein S13 [Bacillus anthracis str. A0248]
 gi|296322020|gb|ADH04948.1| 30S ribosomal protein S13 [Bacillus thuringiensis BMB171]
 gi|298723024|gb|EFI63922.1| 30S ribosomal protein S13 [Bacillus cereus SJ1]
 gi|300374041|gb|ADK02945.1| 30S ribosomal protein S13 [Bacillus cereus biovar anthracis str.
           CI]
          Length = 121

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|296137042|ref|YP_003644284.1| 30S ribosomal protein S13 [Thiomonas intermedia K12]
 gi|294341219|emb|CAZ89620.1| 30S ribosomal subunit protein S13 [Thiomonas sp. 3As]
 gi|295797164|gb|ADG31954.1| 30S ribosomal protein S13 [Thiomonas intermedia K12]
          Length = 121

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG  +++ IC+   +P  +R+  L ++++ ++R+AI
Sbjct: 1   MARIAGINIPPHQHSEIGLTAIYGIGRTTARAICDASGVPYNKRIKDLSDADLEKVREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR +++NIKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK   KG +  
Sbjct: 61  GK-LTIEGDLRREISVNIKRLMDLGCYRGFRHRRGLPVRGQRTRTNARTRKGPRKGSITL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|227509954|ref|ZP_03940003.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227512887|ref|ZP_03942936.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577]
 gi|227523015|ref|ZP_03953064.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290]
 gi|227083887|gb|EEI19199.1| ribosomal protein S13 [Lactobacillus buchneri ATCC 11577]
 gi|227089833|gb|EEI25145.1| ribosomal protein S13 [Lactobacillus hilgardii ATCC 8290]
 gi|227190560|gb|EEI70627.1| ribosomal protein S13 [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 121

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG  +S+ I  +  +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIFGIGTSTSEKILAQAGVSEDVRVRDLTPDQEDKIRAIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK     GV R
Sbjct: 61  S-DLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKATAGVGR 119

Query: 121 KR 122
           ++
Sbjct: 120 RK 121


>gi|289435874|ref|YP_003465746.1| hypothetical protein lse_2513 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172118|emb|CBH28664.1| rpsM [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313631792|gb|EFR98972.1| 30S ribosomal protein S13 [Listeria seeligeri FSL N1-067]
 gi|313636144|gb|EFS02007.1| 30S ribosomal protein S13 [Listeria seeligeri FSL S4-171]
          Length = 121

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V +L YI+GIG +++  +  +  +  + R   L E E+ +IR+ +
Sbjct: 1   MARIAGVDVPREKRIVISLTYIYGIGKQTASKVLAEAGVSEDTRTRDLTEEELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +
Sbjct: 61  DR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVSGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|160942873|ref|ZP_02090112.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445774|gb|EDP22777.1| hypothetical protein FAEPRAM212_00349 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103947|emb|CBL01491.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii SL3/3]
          Length = 123

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLDEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART K   +    
Sbjct: 61  DQANILVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|323344660|ref|ZP_08084884.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269]
 gi|323093930|gb|EFZ36507.1| 30S ribosomal protein S13 [Prevotella oralis ATCC 33269]
          Length = 126

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVSEWNDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  ISAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|229170986|ref|ZP_04298587.1| 30S ribosomal protein S13 [Bacillus cereus MM3]
 gi|228612526|gb|EEK69747.1| 30S ribosomal protein S13 [Bacillus cereus MM3]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DS-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|172056165|ref|YP_001812625.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15]
 gi|226712737|sp|B1YGX5|RS13_EXIS2 RecName: Full=30S ribosomal protein S13
 gi|171988686|gb|ACB59608.1| ribosomal protein S13 [Exiguobacterium sibiricum 255-15]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L YI+G+G  ++Q +  +  I  + R  +L E ++ Q+R  +
Sbjct: 1   MARIAGVDIPREKRIVISLTYIYGVGKTTAQKVLKEAGISEDTRTRELTEEQLNQLRDGL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR +++NIKRL+++GCYRG+RHRRGLPVRGQ T  N+RTRK   +    +
Sbjct: 61  DK-VKVEGDLRREISLNIKRLIEIGCYRGVRHRRGLPVRGQNTKNNSRTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|224437306|ref|ZP_03658278.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
 gi|313143761|ref|ZP_07805954.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
 gi|313128792|gb|EFR46409.1| 30S ribosomal protein S13 [Helicobacter cinaedi CCUG 18818]
          Length = 120

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 86/120 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS+DI   + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILKAVNISFDKRVFDLSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|152993916|ref|YP_001359637.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1]
 gi|158706288|sp|A6QCS1|RS13_SULNB RecName: Full=30S ribosomal protein S13
 gi|151425777|dbj|BAF73280.1| 30S ribosomal protein S13 [Sulfurovum sp. NBC37-1]
          Length = 120

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/119 (54%), Positives = 85/119 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  +S+ I ++  I    RVH+L +++   IR  I
Sbjct: 1   MARIAGVDLPQKKRIEYALTYIYGIGLTTSRKILDRTGIDYNTRVHELTDAQAATIRNDI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +++  VEGDLR+ V ++IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK   K   A
Sbjct: 61  QENVMVEGDLRKKVTLDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119


>gi|330837633|ref|YP_004412274.1| 30S ribosomal protein S13P [Spirochaeta coccoides DSM 17374]
 gi|329749536|gb|AEC02892.1| SSU ribosomal protein S13P [Spirochaeta coccoides DSM 17374]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/110 (58%), Positives = 84/110 (76%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+  IC + A+ P+ R++ L   ++ ++R+ I
Sbjct: 1   MARIAGVDLP-NKAVKIALTYIYGIGNYSAAKICEQTAVNPDERLNNLSSEDLSKLREII 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +++VEG LR  V +NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR
Sbjct: 60  ENNFKVEGRLRTEVGLNIKRLMDIGCYRGLRHRKGLPVRGQRTKTNARTR 109


>gi|37528522|ref|NP_931867.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|253991667|ref|YP_003043023.1| 30S ribosomal protein S13 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|81418034|sp|Q7MYH2|RS13_PHOLL RecName: Full=30S ribosomal protein S13
 gi|36787960|emb|CAE17077.1| 30S ribosomal protein S13 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|253783117|emb|CAQ86282.1| 30s ribosomal subunit protein s13 [Photorhabdus asymbiotica]
          Length = 118

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQAICAAAGIAEHVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|282858351|ref|ZP_06267531.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010]
 gi|282588799|gb|EFB93924.1| 30S ribosomal protein S13 [Prevotella bivia JCVIHMP010]
          Length = 126

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/113 (54%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|157960035|ref|YP_001500069.1| 30S ribosomal protein S13 [Shewanella pealeana ATCC 700345]
 gi|167626018|ref|YP_001676312.1| 30S ribosomal protein S13 [Shewanella halifaxensis HAW-EB4]
 gi|212634851|ref|YP_002311376.1| 30S ribosomal protein S13 [Shewanella piezotolerans WP3]
 gi|189044295|sp|B0TLZ1|RS13_SHEHH RecName: Full=30S ribosomal protein S13
 gi|189044296|sp|A8GYZ7|RS13_SHEPA RecName: Full=30S ribosomal protein S13
 gi|226712785|sp|B8CNF5|RS13_SHEPW RecName: Full=30S ribosomal protein S13
 gi|157845035|gb|ABV85534.1| ribosomal protein S13 [Shewanella pealeana ATCC 700345]
 gi|167356040|gb|ABZ78653.1| ribosomal protein S13 [Shewanella halifaxensis HAW-EB4]
 gi|212556335|gb|ACJ28789.1| Ribosomal protein S13 [Shewanella piezotolerans WP3]
          Length = 118

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGRTRAQAICAATSIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  -ANYIVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|270291110|ref|ZP_06197333.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4]
 gi|304385390|ref|ZP_07367735.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284]
 gi|270280506|gb|EFA26341.1| 30S ribosomal protein S13 [Pediococcus acidilactici 7_4]
 gi|304328597|gb|EFL95818.1| 30S ribosomal protein S13 [Pediococcus acidilactici DSM 20284]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI+GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIYGIGNTTAQKILKDADVSEDVRVRDLTADQEDKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        R
Sbjct: 61  DK-YLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|323527579|ref|YP_004229732.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001]
 gi|323384581|gb|ADX56672.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1001]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+G+G   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLTDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   + 
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|257054495|ref|YP_003132327.1| 30S ribosomal protein S13P [Saccharomonospora viridis DSM 43017]
 gi|256584367|gb|ACU95500.1| SSU ribosomal protein S13P [Saccharomonospora viridis DSM 43017]
          Length = 126

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 85/117 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+DI     + P+ RV  L + ++ ++R+ I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIYGIGRTRSKDIIAATQLNPDVRVKDLGDDDLAKLREFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E++Y+VEGDLRR V  +I+R +++GCY GLR RRGLPVRGQRT TNARTRK   K  
Sbjct: 61  EENYKVEGDLRREVNADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRKGPKKTV 117


>gi|28493497|ref|NP_787658.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist]
 gi|28572390|ref|NP_789170.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27]
 gi|54039357|sp|P66398|RS13_TROW8 RecName: Full=30S ribosomal protein S13
 gi|54042127|sp|P66397|RS13_TROWT RecName: Full=30S ribosomal protein S13
 gi|28410521|emb|CAD66907.1| 30S ribosomal protein S13 [Tropheryma whipplei TW08/27]
 gi|28476539|gb|AAO44627.1| 30S ribosomal protein S13 [Tropheryma whipplei str. Twist]
          Length = 124

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KRV   L YI GIG   S+       I  + RV  L + +++ +R  I
Sbjct: 1   MARVAGVDIPGNKRVEIGLTYICGIGPTRSRHALTAAGISFDTRVKDLTDDQLVALRAHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y++EGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K   +    +
Sbjct: 61  QNSYRIEGDLRREVASDIRRKVEIGCYQGLRHRRGLPVNGQRTRTNARSSKGPRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|317049818|ref|YP_004117466.1| 30S ribosomal protein S13 [Pantoea sp. At-9b]
 gi|316951435|gb|ADU70910.1| 30S ribosomal protein S13 [Pantoea sp. At-9b]
          Length = 118

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC +  I    ++ +L E ++ Q+R A+
Sbjct: 1   MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|332076678|gb|EGI87140.1| 30S ribosomal protein S13 [Streptococcus pneumoniae GA17545]
          Length = 129

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|300088172|ref|YP_003758694.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527905|gb|ADJ26373.1| 30S ribosomal protein S13 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 129

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/120 (55%), Positives = 87/120 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K+VV +L YI+GIG   S  I ++L+I    RV  L E E+ ++R+ I
Sbjct: 1   MARIAGVDIPRNKQVVYSLPYIYGIGPTLSARILDRLSIEKTTRVSDLTEEELNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLR+ + +N+KRL D+G YRG RHRRGLPV GQRT TNARTR+   K    R
Sbjct: 61  DKEYRVEGDLRKEITLNVKRLTDIGSYRGQRHRRGLPVHGQRTKTNARTRRGPRKTVAGR 120


>gi|312199995|ref|YP_004020056.1| 30S ribosomal protein S13 [Frankia sp. EuI1c]
 gi|311231331|gb|ADP84186.1| 30S ribosomal protein S13 [Frankia sp. EuI1c]
          Length = 126

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 82/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR++GV++PR KRV   L YI GIG   +++      + P+ RV  L E EVI++R+ I
Sbjct: 1   MARLSGVDLPREKRVEIGLTYIFGIGRTRAKETLVATGVNPDTRVRDLSEDEVIRLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +  Y+VEGDL+R +  +I+R M++GCY+GLRHRR LPV GQRTHTNARTRK   +  
Sbjct: 61  DGHYRVEGDLQREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAI 117


>gi|323342812|ref|ZP_08083044.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463924|gb|EFY09118.1| 30S ribosomal protein S13 [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 88/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRVV +L YI+GIG  +S++I  K  I  + RV  L E +V  IR+ +
Sbjct: 1   MARIAGIDIPRNKRVVVSLTYIYGIGLTTSKEILTKCEISEDIRVKDLTEEQVNAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E   +VEGDLRR V +NIKRLM++G  RG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  ES-IKVEGDLRREVNLNIKRLMEIGSNRGIRHRRGLPVRGQRTKTNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300362366|ref|ZP_07058542.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03]
 gi|300353357|gb|EFJ69229.1| 30S ribosomal protein S13 [Lactobacillus gasseri JV-V03]
          Length = 115

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    I  + R + L   +  ++R  +
Sbjct: 1   MARIAGVDLPRNKRVVVALTYIYGIGESTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKGSKR 114


>gi|125717010|ref|YP_001034143.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK36]
 gi|323350963|ref|ZP_08086621.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66]
 gi|158706286|sp|A3CK88|RS13_STRSV RecName: Full=30S ribosomal protein S13
 gi|125496927|gb|ABN43593.1| 30S ribosomal protein S13, putative [Streptococcus sanguinis SK36]
 gi|322122945|gb|EFX94651.1| 30S ribosomal protein S13 [Streptococcus sanguinis VMC66]
 gi|324989979|gb|EGC21920.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK353]
 gi|324991838|gb|EGC23763.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK405]
 gi|324996272|gb|EGC28180.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK678]
 gi|325686428|gb|EGD28458.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK72]
 gi|325689208|gb|EGD31214.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK115]
 gi|325695787|gb|EGD37684.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK150]
 gi|325697999|gb|EGD39882.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK160]
 gi|327458454|gb|EGF04810.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1]
 gi|327463699|gb|EGF10015.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1057]
 gi|327467358|gb|EGF12858.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK330]
 gi|327471719|gb|EGF17160.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK408]
 gi|327490440|gb|EGF22222.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1058]
 gi|328945194|gb|EGG39348.1| 30S ribosomal protein S13 [Streptococcus sanguinis SK1087]
          Length = 121

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     +  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTIEQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|119478110|ref|ZP_01618189.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143]
 gi|119448816|gb|EAW30059.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2143]
          Length = 118

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+GIG  S++ +C    +  + ++  L E ++  +R  I
Sbjct: 1   MARIAGVNIPDHKHAVISLTYIYGIGRPSAKQLCAATGVAEDIKIGALNEEQLDSLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRL+DLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-MSVEGDLRRQVSMNIKRLLDLGCYRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116


>gi|227115250|ref|ZP_03828906.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227328927|ref|ZP_03832951.1| 30S ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
 gi|253690161|ref|YP_003019351.1| ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259494686|sp|C6DFS6|RS13_PECCP RecName: Full=30S ribosomal protein S13
 gi|251756739|gb|ACT14815.1| ribosomal protein S13 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 118

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|257069482|ref|YP_003155737.1| 30S ribosomal protein S13P [Brachybacterium faecium DSM 4810]
 gi|256560300|gb|ACU86147.1| SSU ribosomal protein S13P [Brachybacterium faecium DSM 4810]
          Length = 124

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   + +      +  + RV ++ + + +++R  +
Sbjct: 1   MARLVGVDLPREKRIEVALTYIFGVGRSRALETLAATGVSGDLRVREVSDEDFVKLRDHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR VA +I+R +++G Y+GLRHRRGLPV GQRT TNARTRK   +    +
Sbjct: 61  EANYMVEGDLRREVAADIRRKVEIGSYQGLRHRRGLPVHGQRTKTNARTRKGPKRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|292489827|ref|YP_003532717.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430]
 gi|292900869|ref|YP_003540238.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC 49946]
 gi|291200717|emb|CBJ47850.1| 30S ribosomal subunit protein S13 [Erwinia amylovora ATCC 49946]
 gi|291555264|emb|CBA23545.1| 30S ribosomal protein S13 [Erwinia amylovora CFBP1430]
 gi|312174009|emb|CBX82262.1| 30S ribosomal protein S13 [Erwinia amylovora ATCC BAA-2158]
          Length = 118

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|16766707|ref|NP_462322.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56415337|ref|YP_152412.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|157148873|ref|YP_001456192.1| 30S ribosomal protein S13 [Citrobacter koseri ATCC BAA-895]
 gi|168264700|ref|ZP_02686673.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168468024|ref|ZP_02701861.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194445617|ref|YP_002042669.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194449228|ref|YP_002047442.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471891|ref|ZP_03077875.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194738391|ref|YP_002116361.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251517|ref|YP_002148338.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197265972|ref|ZP_03166046.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364267|ref|YP_002143904.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198245668|ref|YP_002217381.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200386749|ref|ZP_03213361.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205354954|ref|YP_002228755.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858660|ref|YP_002245311.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238913867|ref|ZP_04657704.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|25009167|sp|Q8ZLM1|RS13_SALTY RecName: Full=30S ribosomal protein S13
 gi|81361068|sp|Q5PK07|RS13_SALPA RecName: Full=30S ribosomal protein S13
 gi|16421974|gb|AAL22281.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56129594|gb|AAV79100.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|157086078|gb|ABV15756.1| hypothetical protein CKO_04711 [Citrobacter koseri ATCC BAA-895]
 gi|194404280|gb|ACF64502.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194407532|gb|ACF67751.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194458255|gb|EDX47094.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194713893|gb|ACF93114.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195628910|gb|EDX48320.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197095744|emb|CAR61314.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197215220|gb|ACH52617.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197244227|gb|EDY26847.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197940184|gb|ACH77517.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199603847|gb|EDZ02392.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274735|emb|CAR39791.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205346873|gb|EDZ33504.1| ribosomal protein S13p [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206710463|emb|CAR34821.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248575|emb|CBG26413.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995627|gb|ACY90512.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159961|emb|CBW19480.1| 30S ribosomal subunit protein S13 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914441|dbj|BAJ38415.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087863|emb|CBY97626.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322615041|gb|EFY11965.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617328|gb|EFY14229.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625550|gb|EFY22375.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626392|gb|EFY23201.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632096|gb|EFY28849.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635025|gb|EFY31748.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643274|gb|EFY39841.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322646642|gb|EFY43149.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649988|gb|EFY46407.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652705|gb|EFY49045.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659538|gb|EFY55782.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665520|gb|EFY61707.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670414|gb|EFY66553.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670487|gb|EFY66621.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322675063|gb|EFY71146.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681600|gb|EFY77629.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685944|gb|EFY81933.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716409|gb|EFZ07980.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323131776|gb|ADX19206.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195814|gb|EFZ80987.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196430|gb|EFZ81581.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202331|gb|EFZ87376.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207320|gb|EFZ92270.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211244|gb|EFZ96089.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216047|gb|EGA00778.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223462|gb|EGA07790.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226808|gb|EGA10998.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231830|gb|EGA15940.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233217|gb|EGA17312.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237284|gb|EGA21349.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245519|gb|EGA29518.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249025|gb|EGA32947.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250648|gb|EGA34529.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256877|gb|EGA40591.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263026|gb|EGA46573.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266026|gb|EGA49521.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272783|gb|EGA56186.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326630103|gb|EGE36446.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 118

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|145636642|ref|ZP_01792309.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH]
 gi|145270168|gb|EDK10104.1| 30S ribosomal protein S13 [Haemophilus influenzae PittHH]
          Length = 118

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICVAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|325972639|ref|YP_004248830.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy]
 gi|324027877|gb|ADY14636.1| 30S ribosomal protein S13 [Spirochaeta sp. Buddy]
          Length = 121

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+ +IC K  I P+  ++ L   ++  +R+ I
Sbjct: 1   MARIAGVDLP-NKAVKIALTYIYGIGRFSAVEICEKTNINPDTNINTLSSEDLAVLRKVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E++Y+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPV GQRT TNARTR
Sbjct: 60  EEEYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVHGQRTKTNARTR 109


>gi|167973083|ref|ZP_02555360.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|167974840|ref|ZP_02557117.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|167975997|ref|ZP_02558274.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|167988496|ref|ZP_02570167.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|168362009|ref|ZP_02695188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|195867601|ref|ZP_03079603.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273653|ref|ZP_03206188.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554322|ref|YP_002284654.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550772|ref|ZP_03771721.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
 gi|225551259|ref|ZP_03772205.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|226712802|sp|B5ZB64|RS13_UREU1 RecName: Full=30S ribosomal protein S13
 gi|171903351|gb|EDT49640.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209077|gb|EDU06120.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018818|gb|EDU56858.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997752|gb|EDU66849.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659696|gb|EDX53076.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660658|gb|EDX53913.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249681|gb|EDY74462.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541823|gb|ACI60052.1| 30S ribosomal protein S13 [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379074|gb|EEH01439.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|225379926|gb|EEH02288.1| ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
          Length = 132

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 7/128 (5%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--- 57
           MARI GV+IP  KRVV +L YI GIG  +SQ I     I    RV+ L + ++ +IR   
Sbjct: 1   MARILGVDIPNDKRVVISLTYIFGIGKSTSQKILKLANIDENIRVNDLADEQIAEIRRVA 60

Query: 58  ----QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
               +A  +  Q+EGDLRRTVAM+IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK  
Sbjct: 61  LNFVKANGEKLQLEGDLRRTVAMDIKRLMEIGSYRGIRHRRGLPVRGQRTKTNARTRKGP 120

Query: 114 GKGGVARK 121
            K    +K
Sbjct: 121 RKTVANKK 128


>gi|313112853|ref|ZP_07798499.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624758|gb|EFQ08067.1| 30S ribosomal protein S13 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 123

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILEATGINPDTRVKDLTLEEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART K   +    
Sbjct: 61  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|91785442|ref|YP_560648.1| 30S ribosomal protein S13 [Burkholderia xenovorans LB400]
 gi|170695704|ref|ZP_02886846.1| ribosomal protein S13 [Burkholderia graminis C4D1M]
 gi|296163298|ref|ZP_06846059.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1]
 gi|307731232|ref|YP_003908456.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003]
 gi|123358403|sp|Q13TJ3|RS13_BURXL RecName: Full=30S ribosomal protein S13
 gi|91689396|gb|ABE32596.1| SSU ribosomal protein S13P [Burkholderia xenovorans LB400]
 gi|170139309|gb|EDT07495.1| ribosomal protein S13 [Burkholderia graminis C4D1M]
 gi|295886437|gb|EFG66294.1| 30S ribosomal protein S13 [Burkholderia sp. Ch1-1]
 gi|307585767|gb|ADN59165.1| 30S ribosomal protein S13 [Burkholderia sp. CCGE1003]
          Length = 121

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+GIG   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGIGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   + 
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|167626785|ref|YP_001677285.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667365|ref|ZP_04754943.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875915|ref|ZP_05248625.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189044265|sp|B0U0W8|RS13_FRAP2 RecName: Full=30S ribosomal protein S13
 gi|158523429|gb|ABW70827.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167596786|gb|ABZ86784.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841936|gb|EET20350.1| 30S ribosomal protein S13 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 118

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 1/119 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I+GIG   +Q IC    + P  ++  L E ++  +R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLTSIYGIGKTRAQQICQSCKVDPTVKIKDLSEEQIETLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            + + VEGDLRR V+M+IKRLMDLGC+RG RHRR LPVRGQRT TNARTRK   K   A
Sbjct: 61  AK-FTVEGDLRREVSMDIKRLMDLGCFRGRRHRRSLPVRGQRTKTNARTRKGPRKPIKA 118


>gi|269959710|ref|ZP_06174090.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3]
 gi|269835633|gb|EEZ89712.1| 30S ribosomal protein S13 [Vibrio harveyi 1DA3]
          Length = 118

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|239618240|ref|YP_002941562.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1]
 gi|259494683|sp|C5CGH7|RS13_KOSOT RecName: Full=30S ribosomal protein S13
 gi|239507071|gb|ACR80558.1| ribosomal protein S13 [Kosmotoga olearia TBF 19.5.1]
          Length = 121

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 82/121 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL YI+GIG   +++I     I  ++RV  L + E+ +I + I
Sbjct: 1   MARIVGVELPNNKKTFVALTYIYGIGPARAKEILKNTNIDGDKRVKDLTDEEISRISKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y+VEG+LR+ V  NIKRL+++GCYRG+RH+ GLPVRGQ+TH+NARTRK      + +
Sbjct: 61  TDHYKVEGELRQEVERNIKRLIEIGCYRGIRHKIGLPVRGQKTHSNARTRKGPRASRIKK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|13507928|ref|NP_109877.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae M129]
 gi|2500457|sp|Q50297|RS13_MYCPN RecName: Full=30S ribosomal protein S13
 gi|1215699|gb|AAC43692.1| RpsM [Mycoplasma pneumoniae]
 gi|1674347|gb|AAB96290.1| ribosomal protein S13 [Mycoplasma pneumoniae M129]
 gi|301633191|gb|ADK86745.1| 30S ribosomal protein S13 [Mycoplasma pneumoniae FH]
          Length = 124

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KR+  AL YI GIG   SQ I  +  I P++RV  L E E + IR  +
Sbjct: 1   MARILGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFVAIRN-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EGDLRR +A+NIK L ++G +RGLRHR+ LPVRGQRT TNARTRK   K    +
Sbjct: 60  ASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRTNARTRKGPRKTVANK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|310659477|ref|YP_003937198.1| 30S ribosomal protein S13 [Clostridium sticklandii DSM 519]
 gi|308826255|emb|CBH22293.1| 30S ribosomal subunit protein S13 [Clostridium sticklandii]
          Length = 122

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV+  L YI GIG  +S  I +   I    R+  L E EV  +R+ I
Sbjct: 1   MARIAGVDLPREKRVIIGLTYIFGIGKNTSAQILSATGINESTRIKDLTEEEVNLLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR +++NIKRL D+ CYRG+RH +GLPVRGQ+T TNARTRK   +    +
Sbjct: 61  D-NYNVEGDLRREISLNIKRLRDIRCYRGIRHMKGLPVRGQKTKTNARTRKGPKRTVGRK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|291619153|ref|YP_003521895.1| RpsM [Pantoea ananatis LMG 20103]
 gi|304399268|ref|ZP_07381134.1| 30S ribosomal protein S13 [Pantoea sp. aB]
 gi|308188334|ref|YP_003932465.1| 30S ribosomal protein S13 [Pantoea vagans C9-1]
 gi|291154183|gb|ADD78767.1| RpsM [Pantoea ananatis LMG 20103]
 gi|304353194|gb|EFM17575.1| 30S ribosomal protein S13 [Pantoea sp. aB]
 gi|308058844|gb|ADO11016.1| 30S ribosomal protein S13 [Pantoea vagans C9-1]
 gi|327395482|dbj|BAK12904.1| 30S ribosomal protein S13 RpsM [Pantoea ananatis AJ13355]
          Length = 118

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC    I    ++ +L E ++ Q+R A+
Sbjct: 1   MARIAGINIPDQKHTVIALTSIFGIGKTRSKAICASTGIAENVKISELSEEQIDQLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|295101436|emb|CBK98981.1| SSU ribosomal protein S13P [Faecalibacterium prausnitzii L2-6]
          Length = 123

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y++GIG  ++  I     I P+ RV  L   E  +IR  I
Sbjct: 1   MARIAGVDLPREKRVQVGLTYVYGIGQTTANKILAATGINPDTRVKDLTLEEEAKIRDYI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q +  VEGDLRR VA++IKRL+++  +RG RHR+ LP RGQRT TNART K   +    
Sbjct: 61  DQANIIVEGDLRRNVALDIKRLVEIQSFRGTRHRKNLPCRGQRTKTNARTCKGPKRTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|227894544|ref|ZP_04012349.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047]
 gi|227863703|gb|EEJ71124.1| ribosomal protein S13 [Lactobacillus ultunensis DSM 16047]
          Length = 116

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/115 (54%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRVVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|301168434|emb|CBW28024.1| 30S ribosomal protein S13 [Bacteriovorax marinus SJ]
          Length = 127

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 82/121 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IPR K V  AL  I+G+G K ++++  K  I   +  + L E E   IR  +
Sbjct: 1   MARILGVDIPRNKVVTVALRSIYGVGPKVAEEVLTKAGIDLNKNSNDLTEEEANNIRLLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR + +NIKRL DLGCYRG+RHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 61  EGEYTVEGDLRRQIGLNIKRLKDLGCYRGIRHRKGLPVRGQRTSTNARTRKGPAKAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|283768439|ref|ZP_06341351.1| 30S ribosomal protein S13 [Bulleidia extructa W1219]
 gi|283104831|gb|EFC06203.1| 30S ribosomal protein S13 [Bulleidia extructa W1219]
          Length = 121

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+IPR K +  +L YI+GIG  +++ I  +  I P  R  +L + +   IR  +
Sbjct: 1   MPRIAGVDIPRHKVIGISLTYIYGIGPTTAKKILEECGIDPSTRTSELTDEQETAIRSKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   + EGDLRR  A++IKRLM++G YRG RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DS-VKTEGDLRRDTALDIKRLMEIGSYRGTRHRRGLPVRGQRTKTNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261823210|ref|YP_003261316.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163]
 gi|261607223|gb|ACX89709.1| 30S ribosomal protein S13 [Pectobacterium wasabiae WPP163]
          Length = 118

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|188535256|ref|YP_001909053.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99]
 gi|259909978|ref|YP_002650334.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96]
 gi|226712736|sp|B2VK74|RS13_ERWT9 RecName: Full=30S ribosomal protein S13
 gi|188030298|emb|CAO98187.1| 30S ribosomal protein S13 [Erwinia tasmaniensis Et1/99]
 gi|224965600|emb|CAX57132.1| 30S ribosomal protein S13 [Erwinia pyrifoliae Ep1/96]
 gi|283480076|emb|CAY75992.1| 30S ribosomal protein S13 [Erwinia pyrifoliae DSM 12163]
 gi|310765576|gb|ADP10526.1| 30S ribosomal protein S13 [Erwinia sp. Ejp617]
          Length = 118

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICASTGIAENVKISELSEEQIDILRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|52840596|ref|YP_094395.1| 30S ribosomal protein S13 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54293343|ref|YP_125758.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens]
 gi|54296387|ref|YP_122756.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris]
 gi|148361033|ref|YP_001252240.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby]
 gi|296105899|ref|YP_003617599.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99
           Alcoy]
 gi|81369315|sp|Q5WZJ0|RS13_LEGPL RecName: Full=30S ribosomal protein S13
 gi|81371222|sp|Q5X837|RS13_LEGPA RecName: Full=30S ribosomal protein S13
 gi|81378213|sp|Q5ZYM1|RS13_LEGPH RecName: Full=30S ribosomal protein S13
 gi|158706243|sp|A5IHP4|RS13_LEGPC RecName: Full=30S ribosomal protein S13
 gi|52627707|gb|AAU26448.1| 30S ribosomal protein S13 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53750172|emb|CAH11564.1| 30S ribosomal protein S13 [Legionella pneumophila str. Paris]
 gi|53753175|emb|CAH14622.1| 30S ribosomal protein S13 [Legionella pneumophila str. Lens]
 gi|148282806|gb|ABQ56894.1| 30S ribosomal protein S13 [Legionella pneumophila str. Corby]
 gi|295647800|gb|ADG23647.1| small subunit ribosomal protein S13 [Legionella pneumophila 2300/99
           Alcoy]
 gi|307609159|emb|CBW98615.1| 30S ribosomal protein S13 [Legionella pneumophila 130b]
          Length = 118

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/119 (60%), Positives = 85/119 (71%), Gaps = 1/119 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV AL  I+GIG  +S  +C  + I P  +V QL ++++  +R  I
Sbjct: 1   MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCKTVDIDPSVKVSQLSDAQLESLRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            +   VEGDLRR V MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   KG  +
Sbjct: 61  AK-ITVEGDLRRVVTMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKGTSS 118


>gi|42561248|ref|NP_975699.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400483|sp|Q6MSP7|RS13_MYCMS RecName: Full=30S ribosomal protein S13
 gi|42492746|emb|CAE77341.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301321045|gb|ADK69688.1| 30S ribosomal protein S13 [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 121

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISMEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+ EG LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K   K    +
Sbjct: 61  SK-YKTEGKLRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|229815746|ref|ZP_04446071.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM
           13280]
 gi|229808662|gb|EEP44439.1| hypothetical protein COLINT_02795 [Collinsella intestinalis DSM
           13280]
          Length = 124

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR    L YI+GIG  ++  +C  L I    R+  L E ++  IR  I
Sbjct: 1   MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q+   VEGDLRR  + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK   +   A
Sbjct: 61  DQNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGA 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|261250395|ref|ZP_05942970.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891]
 gi|260938964|gb|EEX94951.1| SSU ribosomal protein S13p (S18e) [Vibrio orientalis CIP 102891]
          Length = 118

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSQAILAEVGIAEDVKISELSEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|239818006|ref|YP_002946916.1| ribosomal protein S13 [Variovorax paradoxus S110]
 gi|319796383|ref|YP_004158023.1| 30S ribosomal protein s13 [Variovorax paradoxus EPS]
 gi|259494694|sp|C5CQ78|RS13_VARPS RecName: Full=30S ribosomal protein S13
 gi|239804583|gb|ACS21650.1| ribosomal protein S13 [Variovorax paradoxus S110]
 gi|315598846|gb|ADU39912.1| 30S ribosomal protein S13 [Variovorax paradoxus EPS]
          Length = 121

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I GIG   ++ IC    I   +++  L ++++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIFGIGRTRARQICEASGIEYSKKIKDLTDADLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   + 
Sbjct: 61  -ALFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|146298138|ref|YP_001192729.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101]
 gi|189040502|sp|A5FN18|RS13_FLAJO RecName: Full=30S ribosomal protein S13
 gi|146152556|gb|ABQ03410.1| 30S ribosomal protein S13 [Flavobacterium johnsoniae UW101]
          Length = 124

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + +I  K  +  +++V    + E+  IR A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGLGKSRAIEILEKAQVSQDKKVQDWNDDEIGAIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  S-FYKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|42518453|ref|NP_964383.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533]
 gi|116628986|ref|YP_814158.1| 30S ribosomal protein S13 [Lactobacillus gasseri ATCC 33323]
 gi|227888829|ref|ZP_04006634.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200]
 gi|238853459|ref|ZP_04643837.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4]
 gi|268318875|ref|YP_003292531.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785]
 gi|282852673|ref|ZP_06262015.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1]
 gi|311111216|ref|ZP_07712613.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22]
 gi|81668269|sp|Q74L66|RS13_LACJO RecName: Full=30S ribosomal protein S13
 gi|122274016|sp|Q046A2|RS13_LACGA RecName: Full=30S ribosomal protein S13
 gi|41582738|gb|AAS08349.1| 30S ribosomal protein S13 [Lactobacillus johnsonii NCC 533]
 gi|116094568|gb|ABJ59720.1| SSU ribosomal protein S13P [Lactobacillus gasseri ATCC 33323]
 gi|227850666|gb|EEJ60752.1| 30S ribosomal protein S13 [Lactobacillus johnsonii ATCC 33200]
 gi|238833899|gb|EEQ26158.1| 30S ribosomal protein S13 [Lactobacillus gasseri 202-4]
 gi|262397250|emb|CAX66264.1| ribosomal protein S13 [Lactobacillus johnsonii FI9785]
 gi|282556415|gb|EFB62035.1| 30S ribosomal protein S13 [Lactobacillus gasseri 224-1]
 gi|311066370|gb|EFQ46710.1| 30S ribosomal protein S13 [Lactobacillus gasseri MV-22]
 gi|329666716|gb|AEB92664.1| 30S ribosomal protein S13 [Lactobacillus johnsonii DPC 6026]
          Length = 115

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRVV AL YI+GIG  +++ IC    I  + R + L   +  ++R  +
Sbjct: 1   MARIAGVDLPRNKRVVVALTYIYGIGEPTAKKICKDAGISEDIRTNDLTPEDQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V++NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKGSKR 114


>gi|83319525|ref|YP_424636.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|313665553|ref|YP_004047424.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50]
 gi|91207706|sp|Q2SRH7|RS13_MYCCT RecName: Full=30S ribosomal protein S13
 gi|83283411|gb|ABC01343.1| 30S ribosomal protein S13 [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|312950018|gb|ADR24614.1| 30S ribosomal protein S13 [Mycoplasma leachii PG50]
          Length = 121

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  KRVV +L YI+GIG  ++Q +   L I  + RV  L E ++  I   I
Sbjct: 1   MARISGVEIPNNKRVVVSLTYIYGIGLPTAQSVLKTLNISEDIRVKDLTEEQIKNISIEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+ EG+LRR V++NIKRLM++G YRGLRHR+GLPVRGQ + TNART K   K    +
Sbjct: 61  SK-YKTEGELRREVSLNIKRLMEIGSYRGLRHRKGLPVRGQSSKTNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|307565118|ref|ZP_07627626.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A]
 gi|307346149|gb|EFN91478.1| 30S ribosomal protein S13 [Prevotella amnii CRIS 21A-A]
          Length = 126

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDEQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|281423815|ref|ZP_06254728.1| 30S ribosomal protein S13 [Prevotella oris F0302]
 gi|299141171|ref|ZP_07034308.1| 30S ribosomal protein S13 [Prevotella oris C735]
 gi|281402042|gb|EFB32873.1| 30S ribosomal protein S13 [Prevotella oris F0302]
 gi|298577131|gb|EFI49000.1| 30S ribosomal protein S13 [Prevotella oris C735]
          Length = 126

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|258543841|ref|ZP_05704075.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826]
 gi|258520930|gb|EEV89789.1| 30S ribosomal protein S13 [Cardiobacterium hominis ATCC 15826]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   ++DIC    + P +++  L ++EV  +R A+
Sbjct: 1   MARIAGINVPTQKHTVIALTSIYGIGPTRARDICVAAKVEPSKKIRDLSDAEVDALRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + YQVEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   +  
Sbjct: 61  AE-YQVEGDLRRQVSMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRRPI 116


>gi|255536131|ref|YP_003096502.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium
           3519-10]
 gi|255342327|gb|ACU08440.1| SSU ribosomal protein S13p (S18e) [Flavobacteriaceae bacterium
           3519-10]
          Length = 125

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR V  L YI+GIG  +S +I     I  +++V++  + E+  IR  I
Sbjct: 1   MARISGIDLPKNKRGVIGLTYIYGIGRSTSSEILKAAGISEDKKVNEWNDDELALIRNFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEG+LR    +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  TENIKVEGELRSETQLNIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86141163|ref|ZP_01059709.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217]
 gi|85831722|gb|EAQ50177.1| 30S ribosomal protein S13 [Leeuwenhoekiella blandensis MED217]
          Length = 124

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q I  +  +    +V++  + ++ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAQKILAQADVDENLKVNEWDDDQIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  V+M+IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GS-YKIEGELRSEVSMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116334245|ref|YP_795772.1| 30S ribosomal protein S13 [Lactobacillus brevis ATCC 367]
 gi|122269073|sp|Q03PY1|RS13_LACBA RecName: Full=30S ribosomal protein S13
 gi|116099592|gb|ABJ64741.1| SSU ribosomal protein S13P [Lactobacillus brevis ATCC 367]
          Length = 121

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++PR KR+   L YI GIG  ++  I     +P + RV  L   +  ++R  +
Sbjct: 1   MPRIAGVDLPRDKRIAYGLTYIFGIGINTAHKIVADAGVPEDVRVRDLTPDQEDKVRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y+VEGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DK-YKVEGDLRREVSLNIKNLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKAVSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|304413167|ref|ZP_07394640.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola
           LSR1]
 gi|304284010|gb|EFL92403.1| 30S ribosomal subunit protein S13 [Candidatus Regiella insecticola
           LSR1]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC    +    ++ +L E E+ ++R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTGAQKICGAAGVAESVKISELSEEEINKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR V +NIKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YPIEGDLRRQVTLNIKRLIDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKAI 116


>gi|71894586|ref|YP_278694.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53]
 gi|91207707|sp|Q4A5I8|RS13_MYCS5 RecName: Full=30S ribosomal protein S13
 gi|71851374|gb|AAZ43983.1| 30S ribosomal protein S13 [Mycoplasma synoviae 53]
          Length = 122

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV +L YI+GIG   + +IC K  +    +  +L E+++ ++R+ +
Sbjct: 1   MARILNIEIPNNKRVVISLTYIYGIGKSLASEICKKANVDENTKTAELTEAQLSKLRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR V +NIKR M++ CYRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKAYTTEGDLRREVTLNIKRYMEIKCYRGIRHRKGLPVRGQSTQKNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|281422228|ref|ZP_06253227.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205]
 gi|281403733|gb|EFB34413.1| 30S ribosomal protein S13 [Prevotella copri DSM 18205]
          Length = 126

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWSDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|117619798|ref|YP_854864.1| 30S ribosomal protein S13 [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|145300913|ref|YP_001143754.1| 30S ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|330827904|ref|YP_004390856.1| 30S ribosomal protein S13 [Aeromonas veronii B565]
 gi|158706212|sp|A0KF42|RS13_AERHH RecName: Full=30S ribosomal protein S13
 gi|158706213|sp|A4SSY4|RS13_AERS4 RecName: Full=30S ribosomal protein S13
 gi|117561205|gb|ABK38153.1| ribosomal protein S13p/S18e [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|142853685|gb|ABO92006.1| ribosomal protein S13 [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|328803040|gb|AEB48239.1| 30S ribosomal protein S13 [Aeromonas veronii B565]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ IC    I    ++  L E+++  +R+ +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGRTRSKAICAAAGIAENVKIKDLDEAQIESLREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRRQISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKAI 116


>gi|304310037|ref|YP_003809635.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1]
 gi|301795770|emb|CBL43969.1| 30S ribosomal protein S13 [gamma proteobacterium HdN1]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  ++Q IC+ + I PE ++  L E+++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAQSICSAVGIDPEVKIKDLAEAKLDEVRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y  EGDLRR ++M+IKRL DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTTEGDLRREISMSIKRLTDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKQI 116


>gi|229083455|ref|ZP_04215803.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44]
 gi|228699888|gb|EEL52525.1| 30S ribosomal protein S13 [Bacillus cereus Rock3-44]
          Length = 121

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  +  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGVSEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|170769485|ref|ZP_02903938.1| ribosomal protein S13p [Escherichia albertii TW07627]
 gi|331674804|ref|ZP_08375561.1| 30S ribosomal protein S13 [Escherichia coli TA280]
 gi|170121542|gb|EDS90473.1| ribosomal protein S13p [Escherichia albertii TW07627]
 gi|331067713|gb|EGI39111.1| 30S ribosomal protein S13 [Escherichia coli TA280]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|291514965|emb|CBK64175.1| SSU ribosomal protein S13P [Alistipes shahii WAL 8301]
          Length = 126

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I     I  + +V    + ++  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILETAGISYDLKVQDWSDDQIGAIRSTI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
                +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  ADLGLKVEGECRSMVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|255319793|ref|ZP_05360998.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82]
 gi|262380326|ref|ZP_06073480.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164]
 gi|255303112|gb|EET82324.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SK82]
 gi|262297772|gb|EEY85687.1| 30S ribosomal protein S13 [Acinetobacter radioresistens SH164]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I     I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAAGITPTVKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|229496152|ref|ZP_04389872.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406]
 gi|229316730|gb|EEN82643.1| 30S ribosomal protein S13 [Porphyromonas endodontalis ATCC 35406]
          Length = 126

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI GIG   +  I +K  I    +V    + +  QIR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIFGIGRSRAAYILDKAGIDRNIKVKDWSDDQAAQIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGSEFKVEGDLRSEVQLNIKRLMDIGCYRGIRHRAGLPVRGQSTKNNARTRKG 113


>gi|116493139|ref|YP_804874.1| 30S ribosomal protein S13 [Pediococcus pentosaceus ATCC 25745]
 gi|122265397|sp|Q03EE0|RS13_PEDPA RecName: Full=30S ribosomal protein S13
 gi|116103289|gb|ABJ68432.1| SSU ribosomal protein S13P [Pediococcus pentosaceus ATCC 25745]
          Length = 121

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V  L YI GIG  ++Q I     +  + RV  L   +  +IR  +
Sbjct: 1   MARIAGVDLPRDKRIVIGLTYIFGIGNTTAQKILKDAEVSEDIRVRDLTADQEDKIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRRTV++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        R
Sbjct: 61  D-NYLVEGDLRRTVSLNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|307823463|ref|ZP_07653692.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96]
 gi|307735448|gb|EFO06296.1| 30S ribosomal protein S13 [Methylobacter tundripaludum SV96]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G +++ +IC ++ I P  ++ +L E ++  IR  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGRQTASEICVEVGITPSIKIKELTEEQLEAIRNVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  SK-MTVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|229077435|ref|ZP_04210086.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2]
 gi|228705885|gb|EEL58220.1| 30S ribosomal protein S13 [Bacillus cereus Rock4-2]
          Length = 127

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILAEAGISEETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|28897053|ref|NP_796658.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633]
 gi|149192391|ref|ZP_01870592.1| 30S ribosomal protein S13 [Vibrio shilonii AK1]
 gi|260361371|ref|ZP_05774436.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030]
 gi|260779481|ref|ZP_05888371.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260877971|ref|ZP_05890326.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034]
 gi|260903549|ref|ZP_05911944.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037]
 gi|323492141|ref|ZP_08097303.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546]
 gi|323495526|ref|ZP_08100600.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326]
 gi|32363283|sp|Q87SZ2|RS13_VIBPA RecName: Full=30S ribosomal protein S13
 gi|28805261|dbj|BAC58542.1| ribosomal protein S13 [Vibrio parahaemolyticus RIMD 2210633]
 gi|148833782|gb|EDL50818.1| 30S ribosomal protein S13 [Vibrio shilonii AK1]
 gi|260604290|gb|EEX30594.1| SSU ribosomal protein S13p (S18e) [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|308089753|gb|EFO39448.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AN-5034]
 gi|308109061|gb|EFO46601.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus AQ4037]
 gi|308114566|gb|EFO52106.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus K5030]
 gi|323313702|gb|EGA66804.1| 30S ribosomal protein S13 [Vibrio brasiliensis LMG 20546]
 gi|323319407|gb|EGA72344.1| 30S ribosomal protein S13 [Vibrio sinaloensis DSM 21326]
 gi|328471856|gb|EGF42733.1| 30S ribosomal protein S13 [Vibrio parahaemolyticus 10329]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|118595313|ref|ZP_01552660.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181]
 gi|118441091|gb|EAV47718.1| 30S ribosomal protein S13 [Methylophilales bacterium HTCC2181]
          Length = 118

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K    AL  I GIG  ++Q IC  + +    ++  L ES V +IR  I
Sbjct: 1   MARIAGVNVPDNKHAEIALTAIFGIGKVTAQKICAAVGVSQSTKIKDLDESAVEKIRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E+ + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLPVRGQ T  NARTRK   +  
Sbjct: 61  EK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRRGLPVRGQNTKNNARTRKGPVRAI 116


>gi|325981827|ref|YP_004294229.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212]
 gi|325531346|gb|ADZ26067.1| 30S ribosomal protein S13 [Nitrosomonas sp. AL212]
          Length = 119

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 84/120 (70%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +  AL  I+GIG  SS D+C  + I  + ++  L E ++  IR  +
Sbjct: 1   MARIAGVNIPNHKHIGIALTSIYGIGRTSSTDLCKAVGIDIDIKLKDLSEDQIELIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR ++MNIKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K   AR
Sbjct: 61  SK-LTIEGDLRREISMNIKRLMDLGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKAIRAR 119


>gi|288803957|ref|ZP_06409380.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18]
 gi|302345098|ref|YP_003813451.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845]
 gi|288333590|gb|EFC72042.1| 30S ribosomal protein S13 [Prevotella melaninogenica D18]
 gi|302149822|gb|ADK96084.1| 30S ribosomal protein S13 [Prevotella melaninogenica ATCC 25845]
          Length = 126

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGISRDLKVSEWSDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|270264351|ref|ZP_06192617.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13]
 gi|270041487|gb|EFA14585.1| 30S ribosomal protein S13 [Serratia odorifera 4Rx13]
          Length = 118

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|237751465|ref|ZP_04581945.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879]
 gi|229372831|gb|EEO23222.1| ribosomal protein S13 [Helicobacter bilis ATCC 43879]
          Length = 120

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG KSS+DI N ++I  ++RVH L E ++ +I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTYIYGIGLKSSRDILNAVSISFDKRVHDLSEDDISKISKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QESYMVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|171462902|ref|YP_001797015.1| ribosomal protein S13 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|226712774|sp|B1XSS4|RS13_POLNS RecName: Full=30S ribosomal protein S13
 gi|171192440|gb|ACB43401.1| ribosomal protein S13 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 121

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +  V  L  I GIG   +  IC    +  +++V  L+++++ ++R  +
Sbjct: 1   MARIAGVNIPNHQHTVIGLTAIFGIGTTRAHQICKTTGVAIDKKVKDLIDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + +  EGDLRR V M+IKRLMDLGCYRG+RHR+ LPVRGQRT TNARTRK   K GV  
Sbjct: 61  GK-FVTEGDLRREVTMSIKRLMDLGCYRGVRHRKDLPVRGQRTKTNARTRKGPRKSGVQL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|259500916|ref|ZP_05743818.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335]
 gi|302190631|ref|ZP_07266885.1| 30S ribosomal protein S13 [Lactobacillus iners AB-1]
 gi|309803620|ref|ZP_07697710.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d]
 gi|309804981|ref|ZP_07699039.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c]
 gi|309806699|ref|ZP_07700694.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b]
 gi|309808456|ref|ZP_07702355.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a]
 gi|309809065|ref|ZP_07702938.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871219|ref|ZP_07731317.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a]
 gi|312872776|ref|ZP_07732841.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1]
 gi|312874098|ref|ZP_07734133.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d]
 gi|312874881|ref|ZP_07734900.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b]
 gi|315654002|ref|ZP_07906918.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195]
 gi|325912347|ref|ZP_08174743.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D]
 gi|325913206|ref|ZP_08175575.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B]
 gi|329920624|ref|ZP_08277311.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G]
 gi|259167610|gb|EEW52105.1| 30S ribosomal protein S13 [Lactobacillus iners DSM 13335]
 gi|308164218|gb|EFO66475.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 11V1-d]
 gi|308165741|gb|EFO67966.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 09V1-c]
 gi|308166879|gb|EFO69063.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 03V1-b]
 gi|308168284|gb|EFO70403.1| 30S ribosomal protein S13 [Lactobacillus iners LactinV 01V1-a]
 gi|308170510|gb|EFO72530.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 2503V10-D]
 gi|311089626|gb|EFQ48051.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2053A-b]
 gi|311090438|gb|EFQ48847.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2052A-d]
 gi|311091818|gb|EFQ50197.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093233|gb|EFQ51579.1| 30S ribosomal protein S13 [Lactobacillus iners LEAF 3008A-a]
 gi|315488698|gb|EFU78344.1| 30S ribosomal protein S13 [Lactobacillus iners ATCC 55195]
 gi|325475818|gb|EGC78988.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 143-D]
 gi|325477470|gb|EGC80613.1| 30S ribosomal protein S13 [Lactobacillus iners UPII 60-B]
 gi|328935882|gb|EGG32342.1| 30S ribosomal protein S13 [Lactobacillus iners SPIN 1401G]
          Length = 116

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/112 (52%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEPTAKVICEAAGVSEDVRTSDLTPEQQEKLRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           ++ ++VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK 
Sbjct: 61  DK-FRVEGDLRREVNLNIKRLVEIGSYRGIRHRRGLPVRGQNTKNNARTRKG 111


>gi|225010539|ref|ZP_03701010.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C]
 gi|225005368|gb|EEG43319.1| ribosomal protein S13 [Flavobacteria bacterium MS024-3C]
          Length = 124

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I     +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGRTRAKEILIAAGVSEDTKVSDWNDDEISKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRTGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|127511114|ref|YP_001092311.1| 30S ribosomal protein S13 [Shewanella loihica PV-4]
 gi|158706276|sp|A3Q9A4|RS13_SHELP RecName: Full=30S ribosomal protein S13
 gi|126636409|gb|ABO22052.1| SSU ribosomal protein S13P [Shewanella loihica PV-4]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGLTRAQQICAATSIAEDAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|315037554|ref|YP_004031122.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112]
 gi|325956027|ref|YP_004286637.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC]
 gi|312275687|gb|ADQ58327.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1112]
 gi|325332592|gb|ADZ06500.1| 30S ribosomal protein S13 [Lactobacillus acidophilus 30SC]
 gi|327182850|gb|AEA31297.1| 30S ribosomal protein S13 [Lactobacillus amylovorus GRL 1118]
          Length = 116

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDTTAKKICADAGVSEDVRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|260061920|ref|YP_003195000.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501]
 gi|88786053|gb|EAR17222.1| 30S ribosomal protein S13 [Robiginitalea biformata HTCC2501]
          Length = 124

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +++I  K  +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAKEILEKAKVDEDTKVSDWSDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GE-FTIEGELRSETQINIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|237736195|ref|ZP_04566676.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817]
 gi|229421748|gb|EEO36795.1| SSU ribosomal protein S13P [Fusobacterium mortiferum ATCC 9817]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILTEAGINFDTRVKDLTEEEVNKIRAIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E   +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  ET-IKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|332042698|gb|EGI78898.1| 30S ribosomal protein S13 [Lacinutrix algicola 5H-3-7-4]
          Length = 123

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI+G+G   +Q+I     +    +V    + ++  IR+ +
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIYGVGRSRAQEILATAKVDESIKVQDWTDDQIGAIRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GT-FTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|86148806|ref|ZP_01067073.1| 30S ribosomal protein S13 [Vibrio sp. MED222]
 gi|148982229|ref|ZP_01816655.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3]
 gi|218710727|ref|YP_002418348.1| 30S ribosomal protein S13 [Vibrio splendidus LGP32]
 gi|85833396|gb|EAQ51587.1| 30S ribosomal protein S13 [Vibrio sp. MED222]
 gi|145960591|gb|EDK25944.1| 30S ribosomal protein S13 [Vibrionales bacterium SWAT-3]
 gi|218323746|emb|CAV20100.1| ribosomal protein S13 [Vibrio splendidus LGP32]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|313158274|gb|EFR57676.1| 30S ribosomal protein S13 [Alistipes sp. HGB5]
          Length = 126

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 77/123 (62%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I     I  + +V    + ++  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILEVAGISYDLKVQDWSDDQIGAIRSTI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            +   +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  ADMGIKVEGECRSAVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKGRKKTVAN 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|295135679|ref|YP_003586355.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87]
 gi|294983694|gb|ADF54159.1| 30S ribosomal protein S13 [Zunongwangia profunda SM-A87]
          Length = 124

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q+I  +  +   ++V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGKSRAQEILAEAKVDESKKVSDWNDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y +EG+LR  V M+IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  G-NYTIEGELRTEVQMSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|317494320|ref|ZP_07952734.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917570|gb|EFV38915.1| 30S ribosomal protein S13 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICEATGIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|256844453|ref|ZP_05549939.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN]
 gi|262047175|ref|ZP_06020133.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US]
 gi|293380400|ref|ZP_06626471.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1]
 gi|295692183|ref|YP_003600793.1| 30S ribosomal protein s13 [Lactobacillus crispatus ST1]
 gi|256613531|gb|EEU18734.1| 30S ribosomal protein S13 [Lactobacillus crispatus 125-2-CHN]
 gi|260572420|gb|EEX28982.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-3A-US]
 gi|290923083|gb|EFE00015.1| 30S ribosomal protein S13 [Lactobacillus crispatus 214-1]
 gi|295030289|emb|CBL49768.1| 30S ribosomal protein S13 [Lactobacillus crispatus ST1]
          Length = 116

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|254495734|ref|ZP_05108649.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12]
 gi|254355047|gb|EET13667.1| 30S ribosomal protein S13 [Legionella drancourtii LLAP12]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/118 (60%), Positives = 84/118 (71%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV AL  I+GIG  +S  +C+ + I P  +V QL ++++   R  I
Sbjct: 1   MARIAGVNIPDHKHVVIALTAIYGIGKTTSLKLCSTVGIDPSTKVSQLTDAQLEAFRTEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            +   VEGDLRR + MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   KG  
Sbjct: 61  AK-ITVEGDLRRVITMNIKRLMDLGCYRGLRHRRGLPLRGQRTKTNARTRKGRRKGTT 117


>gi|288942050|ref|YP_003444290.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180]
 gi|288897422|gb|ADC63258.1| 30S ribosomal protein S13 [Allochromatium vinosum DSM 180]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V AL  I+GIG   +  IC+   I    +V  L E EV ++R  +
Sbjct: 1   MARIAGVNIPDKKHAVIALTAIYGIGRTRAGLICDAAGIARTTKVQSLTEEEVDKLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   +  
Sbjct: 61  AK-YSVEGDLRREVSMNIKRLMDLGCYRGIRHRRGLPLRGQRTRTNARTRKGPRRPI 116


>gi|19704621|ref|NP_604183.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296329032|ref|ZP_06871538.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|32363351|sp|Q8RE41|RS13_FUSNN RecName: Full=30S ribosomal protein S13
 gi|19714921|gb|AAL95482.1| SSU ribosomal protein S13P [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296153836|gb|EFG94648.1| 30S ribosomal protein S13 [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ I  +  I  + RV  L E E+ +IR+ I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQKILKEAGINFDTRVKDLTEEEINKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +D +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -KDIKVEGDLRKEVRLSVKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|301628939|ref|XP_002943606.1| PREDICTED: 30S ribosomal protein S13-like [Xenopus (Silurana)
           tropicalis]
          Length = 121

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPHKHAEIGLTAIYGIGRTRARKICEACGIEYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   KG  A 
Sbjct: 61  AR-LTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|123444076|ref|YP_001008046.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238752669|ref|ZP_04614140.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380]
 gi|238754194|ref|ZP_04615552.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473]
 gi|238758782|ref|ZP_04619956.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236]
 gi|238783186|ref|ZP_04627212.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970]
 gi|238788890|ref|ZP_04632680.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641]
 gi|238792957|ref|ZP_04636587.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909]
 gi|238797221|ref|ZP_04640722.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969]
 gi|332163239|ref|YP_004299816.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|158706295|sp|A1JS04|RS13_YERE8 RecName: Full=30S ribosomal protein S13
 gi|122091037|emb|CAL13920.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|238703079|gb|EEP95622.1| 30S ribosomal protein S13 [Yersinia aldovae ATCC 35236]
 gi|238707690|gb|EEQ00050.1| 30S ribosomal protein S13 [Yersinia ruckeri ATCC 29473]
 gi|238709096|gb|EEQ01343.1| 30S ribosomal protein S13 [Yersinia rohdei ATCC 43380]
 gi|238715982|gb|EEQ07968.1| 30S ribosomal protein S13 [Yersinia bercovieri ATCC 43970]
 gi|238718858|gb|EEQ10673.1| 30S ribosomal protein S13 [Yersinia mollaretii ATCC 43969]
 gi|238722917|gb|EEQ14567.1| 30S ribosomal protein S13 [Yersinia frederiksenii ATCC 33641]
 gi|238727811|gb|EEQ19335.1| 30S ribosomal protein S13 [Yersinia intermedia ATCC 29909]
 gi|318607723|emb|CBY29221.1| SSU ribosomal protein S13p (S18e) [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667469|gb|ADZ44113.1| 30S ribosomal protein S13 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861832|emb|CBX72003.1| 30S ribosomal protein S13 [Yersinia enterocolitica W22703]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|326803056|ref|YP_004320874.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650287|gb|AEA00470.1| 30S ribosomal protein S13 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 121

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L YI GIG  +++ IC    +  + RV  L   E+ ++R+ +
Sbjct: 1   MARIAGVDIPRDKRVVISLTYIFGIGKATAEKICEACDVDQDTRVRDLTNDELDRLRKEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR + M+IKRL ++G YRG+RHRRGLPVRGQ T  NARTRK      +A+
Sbjct: 61  DK-IKVEGDLRRDINMDIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKRGLAIAK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|187925593|ref|YP_001897235.1| 30S ribosomal protein S13 [Burkholderia phytofirmans PsJN]
 gi|226712709|sp|B2T728|RS13_BURPP RecName: Full=30S ribosomal protein S13
 gi|187716787|gb|ACD18011.1| ribosomal protein S13 [Burkholderia phytofirmans PsJN]
          Length = 121

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  +     L  I+G+G   S+DIC    +   ++V  L ++++ ++R+ +
Sbjct: 1   MARIAGVNIPNHQHTEIGLTAIYGVGRTRSRDICVAAGVAFSKKVKDLNDADLEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   MNIKRLMDLGCYRG+RHR+GLP+RGQRT TNARTRK   +   + 
Sbjct: 61  GK-FIVEGDLRRETTMNIKRLMDLGCYRGVRHRKGLPLRGQRTRTNARTRKGPRRAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|262392494|ref|YP_003284348.1| 30S ribosomal protein S13p [Vibrio sp. Ex25]
 gi|269964715|ref|ZP_06178953.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B]
 gi|262336088|gb|ACY49883.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. Ex25]
 gi|269830614|gb|EEZ84835.1| 30S ribosomal protein S13 [Vibrio alginolyticus 40B]
          Length = 118

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|218895270|ref|YP_002443681.1| ribosomal protein S13 [Bacillus cereus G9842]
 gi|228898888|ref|ZP_04063170.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222]
 gi|228905932|ref|ZP_04069829.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200]
 gi|228937438|ref|ZP_04100084.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228963235|ref|ZP_04124404.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228970324|ref|ZP_04130983.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976894|ref|ZP_04137306.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407]
 gi|226712692|sp|B7IT44|RS13_BACC2 RecName: Full=30S ribosomal protein S13
 gi|218543072|gb|ACK95466.1| ribosomal protein S13 [Bacillus cereus G9842]
 gi|228782864|gb|EEM31030.1| 30S ribosomal protein S13 [Bacillus thuringiensis Bt407]
 gi|228789433|gb|EEM37353.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228796493|gb|EEM43932.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228822271|gb|EEM68253.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228853747|gb|EEM98507.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 200]
 gi|228860788|gb|EEN05166.1| 30S ribosomal protein S13 [Bacillus thuringiensis IBL 4222]
 gi|326937930|gb|AEA13826.1| 30S ribosomal protein S13 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 121

 Score =  166 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|319778702|ref|YP_004129615.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9]
 gi|317108726|gb|ADU91472.1| SSU ribosomal protein S13p (S18e) [Taylorella equigenitalis MCE9]
          Length = 121

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   S+ IC    +   ++V  L + E+ +IR+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIYGIGRSRSRLICEAAGVETTKKVKDLTDDELEKIREKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  GE-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPRRAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|255038113|ref|YP_003088734.1| 30S ribosomal protein S13 [Dyadobacter fermentans DSM 18053]
 gi|254950869|gb|ACT95569.1| ribosomal protein S13 [Dyadobacter fermentans DSM 18053]
          Length = 125

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KR   +L YI GIG  S++ I  K  +   ++V    + E   IR  I
Sbjct: 1   MARIAGVDIPDRKRGEISLTYIFGIGRSSAKKILEKAGVDLNKKVIDWTDDESGAIRGVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y+VEG L+  V ++IKRLMD+ CYRGLRHR+GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  AGEYKVEGALKSEVQLSIKRLMDIACYRGLRHRKGLPLRGQRTKNNSRTRKGKRKTIANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|57234754|ref|YP_181243.1| 30S ribosomal protein S13 [Dehalococcoides ethenogenes 195]
 gi|91207699|sp|Q3Z956|RS13_DEHE1 RecName: Full=30S ribosomal protein S13
 gi|57225202|gb|AAW40259.1| ribosomal protein S13 [Dehalococcoides ethenogenes 195]
          Length = 129

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 59/120 (49%), Positives = 84/120 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  K+V  +L YI GIG   S+ +  +  +    RV++L + E+ ++R+ I
Sbjct: 1   MVRIAGTDIPDNKQVYFSLQYIFGIGPARSEKVLVQAGVDKAIRVNKLTDEEINRLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEGDLR+ +A+NIKRL+D+GCYRG RH+  LPVRGQRT TNARTR+   K    R
Sbjct: 61  DKEYRVEGDLRKEIALNIKRLIDIGCYRGNRHKHNLPVRGQRTKTNARTRRGPRKTVAGR 120


>gi|58699348|ref|ZP_00374121.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534134|gb|EAL58360.1| ribosomal protein S13p/S18e [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 122

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K V  AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK   +  +A 
Sbjct: 61  RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|331699148|ref|YP_004335387.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
 gi|326953837|gb|AEA27534.1| 30S ribosomal protein S13 [Pseudonocardia dioxanivorans CB1190]
          Length = 126

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 80/117 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI GIG   S +I N   I  + R   L + ++  +R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIFGIGRTRSLEILNATGISKDLRSKDLSDEDLTALRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E +++VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNAR RK   K  
Sbjct: 61  EANFRVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARGRKGPKKTV 117


>gi|300718683|ref|YP_003743486.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661]
 gi|299064519|emb|CAX61639.1| 30S ribosomal protein S13 [Erwinia billingiae Eb661]
          Length = 118

 Score =  166 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++  +R A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSQSICATTGIAENVKISELSEEQIDILRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|224585213|ref|YP_002639012.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469741|gb|ACN47571.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 118

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKIRELSEEQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|254483422|ref|ZP_05096651.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148]
 gi|214036296|gb|EEB76974.1| ribosomal protein S13p/S18e [marine gamma proteobacterium HTCC2148]
          Length = 118

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G  +++++C    +    R+ +L E+E+  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGRTTAKELCAATGVTESTRIGELSETEMDALRGKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  AE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|225709440|gb|ACO10566.1| 30S ribosomal protein S13 [Caligus rogercresseyi]
          Length = 125

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR V  L YI+GIG  SS+ I  +  I    +V +  + ++  IRQ +
Sbjct: 1   MARIAGVDLPKNKRGVIGLTYIYGIGLTSSKKILVEAEIDESVKVREWSDKDIKSIRQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y VEG LR  + +NIKRLMD+ CYRGLRHR+GLP+RGQRT TNARTRK   K    +
Sbjct: 61  ADSYTVEGQLRTEIQLNIKRLMDIACYRGLRHRKGLPLRGQRTQTNARTRKGKRKTVANK 120

Query: 121 KR 122
           ++
Sbjct: 121 EK 122


>gi|210631177|ref|ZP_03296788.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279]
 gi|210160144|gb|EEA91115.1| hypothetical protein COLSTE_00673 [Collinsella stercoris DSM 13279]
          Length = 124

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P  KR    L YI+GIG  ++  +C  L I    R+  L E ++  IR  I
Sbjct: 1   MARINGVDLPNEKRAEIGLTYIYGIGRTTAAKMCADLNIVDGTRIKDLTEEQISAIRDYI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +++   VEGDLRR  + N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK   +   A
Sbjct: 61  DKNGLMVEGDLRRERSQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGA 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|262383851|ref|ZP_06076987.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B]
 gi|301312009|ref|ZP_07217931.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3]
 gi|262294749|gb|EEY82681.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_33B]
 gi|300830111|gb|EFK60759.1| 30S ribosomal protein S13 [Bacteroides sp. 20_3]
          Length = 126

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  +++ + +K  +  + +V    + +  ++R+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREV 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK 
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRLGLPLRGQSTKNNARTRKG 113


>gi|322378757|ref|ZP_08053186.1| 30S ribosomal protein S13 [Helicobacter suis HS1]
 gi|321148787|gb|EFX43258.1| 30S ribosomal protein S13 [Helicobacter suis HS1]
          Length = 122

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/120 (56%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI  K+ I  ++RVH L E ++  I + I
Sbjct: 3   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 63  QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 122


>gi|50086193|ref|YP_047703.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1]
 gi|81392282|sp|Q6F7T4|RS13_ACIAD RecName: Full=30S ribosomal protein S13
 gi|49532169|emb|CAG69881.1| 30S ribosomal protein S13 [Acinetobacter sp. ADP1]
          Length = 118

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  +++ I   + I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKSILAAVGIGPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|157804013|ref|YP_001492562.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel]
 gi|157785276|gb|ABV73777.1| 30S ribosomal protein S13 [Rickettsia canadensis str. McKiel]
          Length = 145

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/121 (50%), Positives = 85/121 (70%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIA VN+P  KR+V +L YI+G+G   + +IC+K  I  +++V +L + E+I +R  IE
Sbjct: 22  ARIASVNVPDNKRLVVSLTYIYGLGPTMAAEICSKAKISKDKKVKELTDQELISLRNIIE 81

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +K
Sbjct: 82  SEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAVAIAGKK 141

Query: 122 R 122
           +
Sbjct: 142 K 142


>gi|315145360|gb|EFT89376.1| 30S ribosomal protein S13 [Enterococcus faecalis TX2141]
          Length = 121

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG +IPR KRVV +L YI+GIG  +++ +   + +  + RV  L   +   IR  I
Sbjct: 1   MARIAGGDIPRDKRVVVSLTYIYGIGNTTAKKVLANVGVSEDVRVRDLTNEQTDAIRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V +NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK   K    +
Sbjct: 61  DK-LKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPTRGQNTKNNARTRKGPTKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|149179435|ref|ZP_01857989.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797]
 gi|148841746|gb|EDL56155.1| 30S ribosomal protein S13 [Planctomyces maris DSM 8797]
          Length = 128

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/121 (49%), Positives = 78/121 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K V  +L Y++GIG  ++ DIC+KL I P+ +   L + E+ +I   +
Sbjct: 1   MPRILGVDIPNEKPVYVSLTYLYGIGKVTALDICHKLNINPQLKAKDLTDDELSRIVNML 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEG LRR    +I RL D+  YRG+RHRRGLPVRGQ T TNARTRK   K    +
Sbjct: 61  DTDYSVEGQLRRATTQDIARLRDIQSYRGIRHRRGLPVRGQNTQTNARTRKGGKKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|150025384|ref|YP_001296210.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86]
 gi|158706230|sp|A6GZ76|RS13_FLAPJ RecName: Full=30S ribosomal protein S13
 gi|149771925|emb|CAL43399.1| 30S ribosomal protein S13 [Flavobacterium psychrophilum JIP02/86]
          Length = 124

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + ++  K  +  +++V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGVGRSRAIEVLEKAQVSQDKKVQDWNDDEIGGIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  S-FYKIEGELRSEVSLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116495923|ref|YP_807657.1| 30S ribosomal protein S13 [Lactobacillus casei ATCC 334]
 gi|191639405|ref|YP_001988571.1| 30S ribosomal protein S13 [Lactobacillus casei BL23]
 gi|227533983|ref|ZP_03964032.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239630328|ref|ZP_04673359.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067480|ref|YP_003789503.1| 30S ribosomal protein L13 [Lactobacillus casei str. Zhang]
 gi|122262677|sp|Q035A7|RS13_LACC3 RecName: Full=30S ribosomal protein S13
 gi|226712751|sp|B3WAJ4|RS13_LACCB RecName: Full=30S ribosomal protein S13
 gi|116106073|gb|ABJ71215.1| SSU ribosomal protein S13P [Lactobacillus casei ATCC 334]
 gi|190713707|emb|CAQ67713.1| 30S ribosomal protein S13 [Lactobacillus casei BL23]
 gi|227188360|gb|EEI68427.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|239527940|gb|EEQ66941.1| 30S ribosomal protein S13 [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439887|gb|ADK19653.1| Ribosomal protein S13 [Lactobacillus casei str. Zhang]
 gi|327383493|gb|AEA54969.1| hypothetical protein LC2W_2639 [Lactobacillus casei LC2W]
 gi|327386686|gb|AEA58160.1| hypothetical protein LCBD_2666 [Lactobacillus casei BD-II]
          Length = 121

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P   R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKNAGVPENVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DS-VKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKASMAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|161506896|ref|YP_001576850.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571]
 gi|172048386|sp|A8YXM8|RS13_LACH4 RecName: Full=30S ribosomal protein S13
 gi|160347885|gb|ABX26559.1| 30S ribosomal protein S13 [Lactobacillus helveticus DPC 4571]
          Length = 116

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGNATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|124003685|ref|ZP_01688533.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134]
 gi|123990740|gb|EAY30207.1| ribosomal protein S13p/S18e [Microscilla marina ATCC 23134]
          Length = 125

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  KR   +L YI+GIG  +++ I  +  I   ++V    + E  +IR  I
Sbjct: 1   MARLAGVDIPDKKRGEVSLTYIYGIGLSTARTILERAGIDRNKKVIDWTDEESNEIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y+VEG L+  V ++IKRLMD+GCYRG+RHR+GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  SSEYKVEGALKSEVQLSIKRLMDIGCYRGIRHRKGLPLRGQKTKNNSRTRKGKRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|294674747|ref|YP_003575363.1| 30S ribosomal protein S13 [Prevotella ruminicola 23]
 gi|294473837|gb|ADE83226.1| ribosomal protein S13 [Prevotella ruminicola 23]
          Length = 126

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 80/113 (70%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V++  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVSRDLKVNEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|298372564|ref|ZP_06982554.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275468|gb|EFI17019.1| 30S ribosomal protein S13 [Bacteroidetes oral taxon 274 str. F0058]
          Length = 126

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+AKR    L YI+GIG  +++ I ++  I    +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQAKRGEVGLTYIYGIGRSTARKILSEAGIDYNIKVQDWSDEQAGKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           I   Y+VEG+LR  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK   K    
Sbjct: 61  IGAKYRVEGELRSEVQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKGKKKTVAN 120

Query: 120 RK 121
           +K
Sbjct: 121 KK 122


>gi|330432102|gb|AEC17161.1| 30S ribosomal protein S13 [Gallibacterium anatis UMN179]
          Length = 118

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   +Q IC+ + I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRAQHICDAVGIAGSVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|269104034|ref|ZP_06156731.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163932|gb|EEZ42428.1| SSU ribosomal protein S13p (S18e) [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 118

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|170728987|ref|YP_001763013.1| 30S ribosomal protein S13 [Shewanella woodyi ATCC 51908]
 gi|226712786|sp|B1KMW1|RS13_SHEWM RecName: Full=30S ribosomal protein S13
 gi|169814334|gb|ACA88918.1| ribosomal protein S13 [Shewanella woodyi ATCC 51908]
          Length = 118

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   ++  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTGIFGIGRTRARAICAATSVAEDAKIKELSEAQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|53803438|ref|YP_114766.1| 30S ribosomal protein S13 [Methylococcus capsulatus str. Bath]
 gi|81681371|sp|Q605D4|RS13_METCA RecName: Full=30S ribosomal protein S13
 gi|53757199|gb|AAU91490.1| ribosomal protein S13 [Methylococcus capsulatus str. Bath]
          Length = 118

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V+ +L  I+GIG   +  IC    I  +++V +L + +V ++R  +
Sbjct: 1   MARIAGVNIPDHKHVLISLTAIYGIGRTRAGLICKNAGIETDKKVRELSDEQVERLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR VAMNIKRLMDLG YRG+RHRRGLPVRGQRT TNARTRK   +  
Sbjct: 61  AK-FVVEGDLRREVAMNIKRLMDLGSYRGMRHRRGLPVRGQRTRTNARTRKGPRRPI 116


>gi|15803825|ref|NP_289859.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 EDL933]
 gi|15833417|ref|NP_312190.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. Sakai]
 gi|16131177|ref|NP_417757.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24114576|ref|NP_709086.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 301]
 gi|26249884|ref|NP_755924.1| 30S ribosomal protein S13 [Escherichia coli CFT073]
 gi|30065401|ref|NP_839572.1| 30S ribosomal protein S13 [Shigella flexneri 2a str. 2457T]
 gi|74313817|ref|YP_312236.1| 30S ribosomal protein S13 [Shigella sonnei Ss046]
 gi|82545661|ref|YP_409608.1| 30S ribosomal protein S13 [Shigella boydii Sb227]
 gi|82778594|ref|YP_404943.1| 30S ribosomal protein S13 [Shigella dysenteriae Sd197]
 gi|89110712|ref|AP_004492.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. W3110]
 gi|91212726|ref|YP_542712.1| 30S ribosomal protein S13 [Escherichia coli UTI89]
 gi|110643537|ref|YP_671267.1| 30S ribosomal protein S13 [Escherichia coli 536]
 gi|110807146|ref|YP_690666.1| 30S ribosomal protein S13 [Shigella flexneri 5 str. 8401]
 gi|117625580|ref|YP_858903.1| 30S ribosomal protein S13 [Escherichia coli APEC O1]
 gi|157156782|ref|YP_001464766.1| 30S ribosomal protein S13 [Escherichia coli E24377A]
 gi|157162772|ref|YP_001460090.1| 30S ribosomal protein S13 [Escherichia coli HS]
 gi|168752252|ref|ZP_02777274.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113]
 gi|168758526|ref|ZP_02783533.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401]
 gi|168764981|ref|ZP_02789988.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501]
 gi|168769160|ref|ZP_02794167.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486]
 gi|168777843|ref|ZP_02802850.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196]
 gi|168783866|ref|ZP_02808873.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076]
 gi|168786188|ref|ZP_02811195.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869]
 gi|168802727|ref|ZP_02827734.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508]
 gi|170018466|ref|YP_001723420.1| 30S ribosomal protein S13 [Escherichia coli ATCC 8739]
 gi|170082818|ref|YP_001732138.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683249|ref|YP_001745560.1| 30S ribosomal protein S13 [Escherichia coli SMS-3-5]
 gi|187730609|ref|YP_001881983.1| 30S ribosomal protein S13 [Shigella boydii CDC 3083-94]
 gi|188496196|ref|ZP_03003466.1| ribosomal protein S13p [Escherichia coli 53638]
 gi|191169310|ref|ZP_03031059.1| ribosomal protein S13p [Escherichia coli B7A]
 gi|191174461|ref|ZP_03035962.1| ribosomal protein S13p [Escherichia coli F11]
 gi|193066496|ref|ZP_03047540.1| ribosomal protein S13p [Escherichia coli E22]
 gi|193071552|ref|ZP_03052461.1| ribosomal protein S13p [Escherichia coli E110019]
 gi|194430277|ref|ZP_03062772.1| ribosomal protein S13p [Escherichia coli B171]
 gi|194435062|ref|ZP_03067300.1| ribosomal protein S13p [Shigella dysenteriae 1012]
 gi|194440008|ref|ZP_03072066.1| ribosomal protein S13p [Escherichia coli 101-1]
 gi|195939846|ref|ZP_03085228.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC4024]
 gi|208809664|ref|ZP_03252001.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206]
 gi|208814033|ref|ZP_03255362.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045]
 gi|208818664|ref|ZP_03258984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042]
 gi|209398653|ref|YP_002272754.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115]
 gi|209920764|ref|YP_002294848.1| 30S ribosomal protein S13 [Escherichia coli SE11]
 gi|215488598|ref|YP_002331029.1| 30S ribosomal protein S13 [Escherichia coli O127:H6 str. E2348/69]
 gi|217325692|ref|ZP_03441776.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588]
 gi|218550574|ref|YP_002384365.1| 30S ribosomal protein S13 [Escherichia fergusonii ATCC 35469]
 gi|218555856|ref|YP_002388769.1| 30S ribosomal protein S13 [Escherichia coli IAI1]
 gi|218560360|ref|YP_002393273.1| 30S ribosomal protein S13 [Escherichia coli S88]
 gi|218691585|ref|YP_002399797.1| 30S ribosomal protein S13 [Escherichia coli ED1a]
 gi|218696991|ref|YP_002404658.1| 30S ribosomal protein S13 [Escherichia coli 55989]
 gi|218702061|ref|YP_002409690.1| 30S ribosomal protein S13 [Escherichia coli IAI39]
 gi|218706906|ref|YP_002414425.1| 30S ribosomal protein S13 [Escherichia coli UMN026]
 gi|237703028|ref|ZP_04533509.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA]
 gi|238902389|ref|YP_002928185.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952]
 gi|253771878|ref|YP_003034709.1| 30S ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254038459|ref|ZP_04872515.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43]
 gi|254163226|ref|YP_003046334.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606]
 gi|254795235|ref|YP_003080072.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. TW14359]
 gi|256020657|ref|ZP_05434522.1| 30S ribosomal protein S13 [Shigella sp. D9]
 gi|256025974|ref|ZP_05439839.1| 30S ribosomal protein S13 [Escherichia sp. 4_1_40B]
 gi|260846096|ref|YP_003223874.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str.
           12009]
 gi|260857419|ref|YP_003231310.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str.
           11368]
 gi|260870041|ref|YP_003236443.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str.
           11128]
 gi|261224603|ref|ZP_05938884.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261254503|ref|ZP_05947036.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284656|ref|YP_003501474.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615]
 gi|293406895|ref|ZP_06650819.1| rps13 [Escherichia coli FVEC1412]
 gi|293412717|ref|ZP_06655385.1| 30S ribosomal protein S13 [Escherichia coli B354]
 gi|297516786|ref|ZP_06935172.1| 30S ribosomal protein S13 [Escherichia coli OP50]
 gi|298382636|ref|ZP_06992231.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302]
 gi|306816359|ref|ZP_07450497.1| 30S ribosomal protein S13 [Escherichia coli NC101]
 gi|307139981|ref|ZP_07499337.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|307315123|ref|ZP_07594706.1| 30S ribosomal protein S13 [Escherichia coli W]
 gi|309785620|ref|ZP_07680251.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617]
 gi|312968377|ref|ZP_07782587.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75]
 gi|312972441|ref|ZP_07786615.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70]
 gi|331643994|ref|ZP_08345123.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|331649095|ref|ZP_08350181.1| 30S ribosomal protein S13 [Escherichia coli M605]
 gi|331654891|ref|ZP_08355890.1| 30S ribosomal protein S13 [Escherichia coli M718]
 gi|331659588|ref|ZP_08360526.1| 30S ribosomal protein S13 [Escherichia coli TA206]
 gi|331664911|ref|ZP_08365812.1| 30S ribosomal protein S13 [Escherichia coli TA143]
 gi|331670127|ref|ZP_08370966.1| 30S ribosomal protein S13 [Escherichia coli TA271]
 gi|331679367|ref|ZP_08380037.1| 30S ribosomal protein S13 [Escherichia coli H591]
 gi|331684940|ref|ZP_08385526.1| 30S ribosomal protein S13 [Escherichia coli H299]
 gi|67472364|sp|P0A7S9|RS13_ECOLI RecName: Full=30S ribosomal protein S13
 gi|67472365|sp|P0A7T0|RS13_ECOL6 RecName: Full=30S ribosomal protein S13
 gi|67472366|sp|P0A7T1|RS13_ECO57 RecName: Full=30S ribosomal protein S13
 gi|67472367|sp|P0A7T2|RS13_SHIFL RecName: Full=30S ribosomal protein S13
 gi|91207724|sp|Q31VX8|RS13_SHIBS RecName: Full=30S ribosomal protein S13
 gi|91207725|sp|Q32B53|RS13_SHIDS RecName: Full=30S ribosomal protein S13
 gi|91207726|sp|Q3YWW1|RS13_SHISS RecName: Full=30S ribosomal protein S13
 gi|122422201|sp|Q1R633|RS13_ECOUT RecName: Full=30S ribosomal protein S13
 gi|122957162|sp|Q0T004|RS13_SHIF8 RecName: Full=30S ribosomal protein S13
 gi|123343548|sp|Q0TCG3|RS13_ECOL5 RecName: Full=30S ribosomal protein S13
 gi|158706229|sp|A1AGI9|RS13_ECOK1 RecName: Full=30S ribosomal protein S13
 gi|116666560|pdb|1VS5|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|116666612|pdb|1VS7|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With The Antibiotic
           Kasugamyin At 3.5a Resolution. This File Contains The
           30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|256032356|pdb|3E1A|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Pre-Accommodation State
 gi|256032413|pdb|3E1C|F Chain F, Structure Of The 30s Subunit And The Trnas Of E. Coli
           Ribosome In Post-Accommodation State
 gi|257097334|pdb|3I1M|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097386|pdb|3I1O|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097438|pdb|3I1Q|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097492|pdb|3I1S|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097546|pdb|3I1Z|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|257097601|pdb|3I21|M Chain M, Crystal Structure Of The E. Coli 70s Ribosome In An
           Intermediate State Of Ratcheting
 gi|290560319|pdb|3KC4|M Chain M, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
           Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
           In Pdb Entry 3kcr
 gi|305677712|pdb|3IYX|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures
           Fitted Into The Cryo-Em Map Of E.Coli 70s Ribosome
           (Emd-1056)
 gi|305677717|pdb|3IYY|M Chain M, Coordinates Of The B1b Bridge-Forming Protein Structures
           Fitted Into The Cryo-Em Map Of Efg.Gdpnp-Bound E.Coli
           70s Ribosome(Emd-1363)
 gi|308198699|pdb|3OR9|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The First
           70s Ribosome.
 gi|308198720|pdb|3ORA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Cem-101. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|326634291|pdb|3IZV|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding. This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A
           Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
           Ef-Tu
 gi|326634316|pdb|3IZW|Q Chain Q, Structural Insights Into Cognate Vs. Near-Cognate
           Discrimination During Decoding.This Entry Contains The
           Small Subunit Of A Ribosome Programmed With A Cognate
           Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
 gi|12517927|gb|AAG58419.1|AE005556_12 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           EDL933]
 gi|26110312|gb|AAN82498.1|AE016767_258 30S ribosomal protein S13 [Escherichia coli CFT073]
 gi|581217|emb|CAA26392.1| unnamed protein product [Escherichia coli]
 gi|606230|gb|AAA58093.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789693|gb|AAC76323.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363636|dbj|BAB37586.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24053772|gb|AAN44793.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 301]
 gi|30043663|gb|AAP19383.1| 30S ribosomal subunit protein S13 [Shigella flexneri 2a str. 2457T]
 gi|73857294|gb|AAZ90001.1| 30S ribosomal subunit protein S13 [Shigella sonnei Ss046]
 gi|81242742|gb|ABB63452.1| 30S ribosomal subunit protein S13 [Shigella dysenteriae Sd197]
 gi|81247072|gb|ABB67780.1| 30S ribosomal subunit protein S13 [Shigella boydii Sb227]
 gi|85676743|dbj|BAE77993.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K12
           substr. W3110]
 gi|91074300|gb|ABE09181.1| 30S ribosomal subunit protein S13 [Escherichia coli UTI89]
 gi|110345129|gb|ABG71366.1| 30S ribosomal protein S13 [Escherichia coli 536]
 gi|110616694|gb|ABF05361.1| 30S ribosomal subunit protein S13 [Shigella flexneri 5 str. 8401]
 gi|115514704|gb|ABJ02779.1| 30S ribosomal subunit protein S13 [Escherichia coli APEC O1]
 gi|157068452|gb|ABV07707.1| ribosomal protein S13p [Escherichia coli HS]
 gi|157078812|gb|ABV18520.1| ribosomal protein S13p [Escherichia coli E24377A]
 gi|169753394|gb|ACA76093.1| ribosomal protein S13 [Escherichia coli ATCC 8739]
 gi|169890653|gb|ACB04360.1| 30S ribosomal subunit protein S13 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520967|gb|ACB19145.1| ribosomal protein S13p [Escherichia coli SMS-3-5]
 gi|187427601|gb|ACD06875.1| ribosomal protein S13p [Shigella boydii CDC 3083-94]
 gi|187767000|gb|EDU30844.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4196]
 gi|188013862|gb|EDU51984.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4113]
 gi|188491395|gb|EDU66498.1| ribosomal protein S13p [Escherichia coli 53638]
 gi|188998874|gb|EDU67860.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4076]
 gi|189354683|gb|EDU73102.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4401]
 gi|189361860|gb|EDU80279.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4486]
 gi|189365118|gb|EDU83534.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4501]
 gi|189373930|gb|EDU92346.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC869]
 gi|189375354|gb|EDU93770.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC508]
 gi|190900665|gb|EDV60465.1| ribosomal protein S13p [Escherichia coli B7A]
 gi|190905269|gb|EDV64907.1| ribosomal protein S13p [Escherichia coli F11]
 gi|192925877|gb|EDV80527.1| ribosomal protein S13p [Escherichia coli E22]
 gi|192955140|gb|EDV85634.1| ribosomal protein S13p [Escherichia coli E110019]
 gi|194411666|gb|EDX27993.1| ribosomal protein S13p [Escherichia coli B171]
 gi|194416669|gb|EDX32800.1| ribosomal protein S13p [Shigella dysenteriae 1012]
 gi|194421060|gb|EDX37089.1| ribosomal protein S13p [Escherichia coli 101-1]
 gi|208729465|gb|EDZ79066.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4206]
 gi|208735310|gb|EDZ83997.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4045]
 gi|208738787|gb|EDZ86469.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4042]
 gi|209160053|gb|ACI37486.1| ribosomal protein S13p [Escherichia coli O157:H7 str. EC4115]
 gi|209757258|gb|ACI76941.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757260|gb|ACI76942.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757262|gb|ACI76943.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757264|gb|ACI76944.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209757266|gb|ACI76945.1| 30S ribosomal subunit protein S13 [Escherichia coli]
 gi|209914023|dbj|BAG79097.1| 30S ribosomal protein S13 [Escherichia coli SE11]
 gi|215266670|emb|CAS11109.1| 30S ribosomal subunit protein S13 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217321913|gb|EEC30337.1| ribosomal protein S13p [Escherichia coli O157:H7 str. TW14588]
 gi|218353723|emb|CAV00002.1| 30S ribosomal subunit protein S13 [Escherichia coli 55989]
 gi|218358115|emb|CAQ90762.1| 30S ribosomal subunit protein S13 [Escherichia fergusonii ATCC
           35469]
 gi|218362624|emb|CAR00250.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI1]
 gi|218367129|emb|CAR04903.1| 30S ribosomal subunit protein S13 [Escherichia coli S88]
 gi|218372047|emb|CAR19907.1| 30S ribosomal subunit protein S13 [Escherichia coli IAI39]
 gi|218429149|emb|CAR10101.2| 30S ribosomal subunit protein S13 [Escherichia coli ED1a]
 gi|218434003|emb|CAR14920.1| 30S ribosomal subunit protein S13 [Escherichia coli UMN026]
 gi|222035007|emb|CAP77750.1| 30S ribosomal protein S13 [Escherichia coli LF82]
 gi|226838965|gb|EEH70988.1| 30S ribosomal subunit protein S13 [Escherichia sp. 1_1_43]
 gi|226902292|gb|EEH88551.1| ribosomal protein S13p [Escherichia sp. 3_2_53FAA]
 gi|238859787|gb|ACR61785.1| 30S ribosomal subunit protein S13 [Escherichia coli BW2952]
 gi|242378825|emb|CAQ33617.1| 30S ribosomal subunit protein S13, subunit of 30S ribosomal subunit
           and ribosome [Escherichia coli BL21(DE3)]
 gi|253322922|gb|ACT27524.1| ribosomal protein S13 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975127|gb|ACT40798.1| 30S ribosomal protein S13 [Escherichia coli B str. REL606]
 gi|253979283|gb|ACT44953.1| 30S ribosomal protein S13 [Escherichia coli BL21(DE3)]
 gi|254594635|gb|ACT73996.1| 30S ribosomal subunit protein S13 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257756068|dbj|BAI27570.1| 30S ribosomal subunit protein S13 [Escherichia coli O26:H11 str.
           11368]
 gi|257761243|dbj|BAI32740.1| 30S ribosomal subunit protein S13 [Escherichia coli O103:H2 str.
           12009]
 gi|257766397|dbj|BAI37892.1| 30S ribosomal subunit protein S13 [Escherichia coli O111:H- str.
           11128]
 gi|260447683|gb|ACX38105.1| short-chain dehydrogenase/reductase SDR [Escherichia coli DH1]
 gi|281180333|dbj|BAI56663.1| 30S ribosomal protein S13 [Escherichia coli SE15]
 gi|281602663|gb|ADA75647.1| 30S ribosomal protein S13 [Shigella flexneri 2002017]
 gi|284923304|emb|CBG36398.1| 30S ribosomal subunit protein S13 [Escherichia coli 042]
 gi|290764529|gb|ADD58490.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. CB9615]
 gi|291425706|gb|EFE98740.1| rps13 [Escherichia coli FVEC1412]
 gi|291468364|gb|EFF10857.1| 30S ribosomal protein S13 [Escherichia coli B354]
 gi|294492834|gb|ADE91590.1| ribosomal protein S13p [Escherichia coli IHE3034]
 gi|298276472|gb|EFI17990.1| 30S ribosomal protein S13 [Escherichia coli FVEC1302]
 gi|305850755|gb|EFM51212.1| 30S ribosomal protein S13 [Escherichia coli NC101]
 gi|306905472|gb|EFN36007.1| 30S ribosomal protein S13 [Escherichia coli W]
 gi|307555386|gb|ADN48161.1| 30S ribosomal subunit protein S13 [Escherichia coli ABU 83972]
 gi|307628333|gb|ADN72637.1| 30S ribosomal protein S13 [Escherichia coli UM146]
 gi|308926740|gb|EFP72216.1| ribosomal S13/S18 family protein [Shigella dysenteriae 1617]
 gi|309703710|emb|CBJ03051.1| 30S ribosomal subunit protein S13 [Escherichia coli ETEC H10407]
 gi|310334818|gb|EFQ01023.1| ribosomal S13/S18 family protein [Escherichia coli 1827-70]
 gi|312287202|gb|EFR15112.1| ribosomal S13/S18 family protein [Escherichia coli 2362-75]
 gi|312947849|gb|ADR28676.1| 30S ribosomal protein S13 [Escherichia coli O83:H1 str. NRG 857C]
 gi|313647392|gb|EFS11844.1| ribosomal S13/S18 family protein [Shigella flexneri 2a str. 2457T]
 gi|315062590|gb|ADT76917.1| 30S ribosomal subunit protein S13 [Escherichia coli W]
 gi|315137873|dbj|BAJ45032.1| 30S ribosomal protein S13 [Escherichia coli DH1]
 gi|315617100|gb|EFU97710.1| ribosomal S13/S18 family protein [Escherichia coli 3431]
 gi|320173942|gb|EFW49118.1| 30S ribosomal protein S13 [Shigella dysenteriae CDC 74-1112]
 gi|320182704|gb|EFW57590.1| 30S ribosomal protein S13 [Shigella boydii ATCC 9905]
 gi|320187019|gb|EFW61731.1| 30S ribosomal protein S13 [Shigella flexneri CDC 796-83]
 gi|320191668|gb|EFW66318.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. EC1212]
 gi|320195390|gb|EFW70017.1| 30S ribosomal protein S13 [Escherichia coli WV_060327]
 gi|320199485|gb|EFW74075.1| 30S ribosomal protein S13 [Escherichia coli EC4100B]
 gi|320639603|gb|EFX09197.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. G5101]
 gi|320645101|gb|EFX14117.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. 493-89]
 gi|320650412|gb|EFX18878.1| 30S ribosomal protein S13 [Escherichia coli O157:H- str. H 2687]
 gi|320655937|gb|EFX23857.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320661389|gb|EFX28804.1| 30S ribosomal protein S13 [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666411|gb|EFX33394.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. LSU-61]
 gi|323154136|gb|EFZ40339.1| ribosomal S13/S18 family protein [Escherichia coli EPECa14]
 gi|323162977|gb|EFZ48812.1| ribosomal protein S13/S18 family protein [Escherichia coli E128010]
 gi|323164862|gb|EFZ50653.1| ribosomal S13/S18 family protein [Shigella sonnei 53G]
 gi|323173934|gb|EFZ59562.1| ribosomal protein S13/S18 family protein [Escherichia coli LT-68]
 gi|323179166|gb|EFZ64740.1| ribosomal protein S13/S18 family protein [Escherichia coli 1180]
 gi|323182776|gb|EFZ68177.1| ribosomal protein S13/S18 family protein [Escherichia coli 1357]
 gi|323189097|gb|EFZ74381.1| ribosomal protein S13/S18 family protein [Escherichia coli RN587/1]
 gi|323376823|gb|ADX49091.1| 30S ribosomal protein S13 [Escherichia coli KO11]
 gi|323934503|gb|EGB30911.1| 30S ribosomal protein S13 [Escherichia coli E1520]
 gi|323939280|gb|EGB35492.1| 30S ribosomal protein S13 [Escherichia coli E482]
 gi|323944281|gb|EGB40357.1| 30S ribosomal protein S13 [Escherichia coli H120]
 gi|323950212|gb|EGB46094.1| 30S ribosomal protein S13 [Escherichia coli H252]
 gi|323954579|gb|EGB50362.1| 30S ribosomal protein S13 [Escherichia coli H263]
 gi|323959551|gb|EGB55204.1| 30S ribosomal protein S13 [Escherichia coli H489]
 gi|323966260|gb|EGB61695.1| 30S ribosomal protein S13 [Escherichia coli M863]
 gi|323970102|gb|EGB65376.1| 30S ribosomal protein S13 [Escherichia coli TA007]
 gi|323974749|gb|EGB69862.1| 30S ribosomal protein S13 [Escherichia coli TW10509]
 gi|324111977|gb|EGC05956.1| 30S ribosomal protein S13 [Escherichia fergusonii B253]
 gi|324116312|gb|EGC10232.1| 30S ribosomal protein S13 [Escherichia coli E1167]
 gi|325498867|gb|EGC96726.1| 30S ribosomal protein S13 [Escherichia fergusonii ECD227]
 gi|326342546|gb|EGD66320.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1044]
 gi|326344533|gb|EGD68282.1| 30S ribosomal protein S13 [Escherichia coli O157:H7 str. 1125]
 gi|327250946|gb|EGE62639.1| ribosomal protein S13/S18 family protein [Escherichia coli STEC_7v]
 gi|330909342|gb|EGH37856.1| SSU ribosomal protein S13p (S18e) [Escherichia coli AA86]
 gi|331036288|gb|EGI08514.1| 30S ribosomal protein S13 [Escherichia coli H736]
 gi|331041593|gb|EGI13737.1| 30S ribosomal protein S13 [Escherichia coli M605]
 gi|331046906|gb|EGI18984.1| 30S ribosomal protein S13 [Escherichia coli M718]
 gi|331052803|gb|EGI24836.1| 30S ribosomal protein S13 [Escherichia coli TA206]
 gi|331057421|gb|EGI29407.1| 30S ribosomal protein S13 [Escherichia coli TA143]
 gi|331062189|gb|EGI34109.1| 30S ribosomal protein S13 [Escherichia coli TA271]
 gi|331072539|gb|EGI43864.1| 30S ribosomal protein S13 [Escherichia coli H591]
 gi|331077311|gb|EGI48523.1| 30S ribosomal protein S13 [Escherichia coli H299]
 gi|332085447|gb|EGI90613.1| ribosomal protein S13/S18 family protein [Shigella boydii 5216-82]
 gi|332086267|gb|EGI91423.1| ribosomal protein S13/S18 family protein [Shigella dysenteriae
           155-74]
 gi|332090433|gb|EGI95531.1| ribosomal protein S13/S18 family protein [Shigella boydii 3594-74]
 gi|332104205|gb|EGJ07551.1| ribosomal protein S13p [Shigella sp. D9]
          Length = 118

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|303256472|ref|ZP_07342486.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47]
 gi|331000666|ref|ZP_08324319.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT
           11859]
 gi|302859963|gb|EFL83040.1| 30S ribosomal protein S13 [Burkholderiales bacterium 1_1_47]
 gi|329570878|gb|EGG52589.1| 30S ribosomal protein S13 [Parasutterella excrementihominis YIT
           11859]
          Length = 121

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   +++I   + +   ++V  L ++E+ +IR AI
Sbjct: 1   MARIAGINIPPNQHAEIGLTAIYGIGRPRAREILEAVGVEKTKKVKDLTDAELERIRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR + ++IKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK   K GVA 
Sbjct: 61  SK-LTVEGDLRREIQLSIKRLIDLGTYRGMRHRRGLPVRGQRTRTNARTRKGPKKAGVAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|260909774|ref|ZP_05916468.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|288929316|ref|ZP_06423161.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|260636199|gb|EEX54195.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|288329418|gb|EFC68004.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 126

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSSSAKILDKAGVNRDLKVSEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQLNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|15639203|ref|NP_218650.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025444|ref|YP_001933216.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14]
 gi|6094154|sp|O83240|RS13_TREPA RecName: Full=30S ribosomal protein S13
 gi|226712800|sp|B2S2F8|RS13_TREPS RecName: Full=30S ribosomal protein S13
 gi|3322479|gb|AAC65199.1| ribosomal protein S13 (rpsM) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018019|gb|ACD70637.1| ribosomal protein S13 [Treponema pallidum subsp. pallidum SS14]
 gi|291059615|gb|ADD72350.1| 30S ribosomal protein S13 [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 121

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GI   S++ IC K  I     ++ L + E+  +R  I
Sbjct: 1   MARIAGVDLP-NKHVSVALTYIYGISRSSARTICEKARISSACLINDLSQDELAVVRAII 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTRK   K    +
Sbjct: 60  DREYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTRKGKRKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|262370556|ref|ZP_06063881.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046]
 gi|262314356|gb|EEY95398.1| 30S ribosomal protein S13 [Acinetobacter johnsonii SH046]
          Length = 118

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I P  ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILAAVGIAPTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|319952173|ref|YP_004163440.1| ssu ribosomal protein s13p [Cellulophaga algicola DSM 14237]
 gi|319420833|gb|ADV47942.1| SSU ribosomal protein S13P [Cellulophaga algicola DSM 14237]
          Length = 124

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I     +  + +V    + E+ +IR+++
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGNSRAKEILANAQVSEDTKVSDWNDDEISRIRESV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SA-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300174008|ref|YP_003773174.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811]
 gi|299888387|emb|CBL92355.1| 30S ribosomal protein S13 [Leuconostoc gasicomitatum LMG 18811]
          Length = 123

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNNTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ D Q+EGDLRR V+++IK L ++  YRG+RHR+GLPV GQ T  NARTRK   K    
Sbjct: 61  DKLDLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVHGQNTKNNARTRKGPAKSIAG 120

Query: 120 RKR 122
           RK+
Sbjct: 121 RKK 123


>gi|254458644|ref|ZP_05072068.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1]
 gi|207084410|gb|EDZ61698.1| ribosomal protein S13p/S18e [Campylobacterales bacterium GD 1]
          Length = 120

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/119 (55%), Positives = 84/119 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KRV   L YI+GIG  +S+ I +   I   +RV +L E++V  I   I
Sbjct: 1   MARISGVDLPKKKRVEYGLTYIYGIGLHASRLILDATGIDYNKRVFELNEADVAAITAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            +++ VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK   K   A
Sbjct: 61  RENHMVEGDLRKKVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119


>gi|229015536|ref|ZP_04172533.1| 30S ribosomal protein S13 [Bacillus cereus AH1273]
 gi|229021746|ref|ZP_04178327.1| 30S ribosomal protein S13 [Bacillus cereus AH1272]
 gi|229027983|ref|ZP_04184136.1| 30S ribosomal protein S13 [Bacillus cereus AH1271]
 gi|229159308|ref|ZP_04287332.1| 30S ribosomal protein S13 [Bacillus cereus R309803]
 gi|228624200|gb|EEK81002.1| 30S ribosomal protein S13 [Bacillus cereus R309803]
 gi|228733371|gb|EEL84200.1| 30S ribosomal protein S13 [Bacillus cereus AH1271]
 gi|228739555|gb|EEL89970.1| 30S ribosomal protein S13 [Bacillus cereus AH1272]
 gi|228745759|gb|EEL95764.1| 30S ribosomal protein S13 [Bacillus cereus AH1273]
          Length = 121

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLTEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|15642569|ref|NP_232202.1| 30S ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674839|ref|YP_001218068.1| 30S ribosomal protein S13 [Vibrio cholerae O395]
 gi|153217778|ref|ZP_01951421.1| ribosomal protein S13 [Vibrio cholerae 1587]
 gi|153827709|ref|ZP_01980376.1| ribosomal protein S13 [Vibrio cholerae MZO-2]
 gi|153831169|ref|ZP_01983836.1| ribosomal protein S13 [Vibrio cholerae 623-39]
 gi|227082691|ref|YP_002811242.1| ribosomal protein S13 [Vibrio cholerae M66-2]
 gi|229507374|ref|ZP_04396879.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286]
 gi|229509702|ref|ZP_04399183.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33]
 gi|229513497|ref|ZP_04402961.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21]
 gi|229516827|ref|ZP_04406273.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9]
 gi|229521640|ref|ZP_04411058.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80]
 gi|229527496|ref|ZP_04416888.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)]
 gi|229606880|ref|YP_002877528.1| 30S ribosomal protein S13 [Vibrio cholerae MJ-1236]
 gi|254292239|ref|ZP_04963002.1| ribosomal protein S13 [Vibrio cholerae AM-19226]
 gi|254851114|ref|ZP_05240464.1| ribosomal protein S13 [Vibrio cholerae MO10]
 gi|255744457|ref|ZP_05418409.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101]
 gi|258622734|ref|ZP_05717752.1| 30S ribosomal protein S13 [Vibrio mimicus VM573]
 gi|258625762|ref|ZP_05720641.1| 30S ribosomal protein S13 [Vibrio mimicus VM603]
 gi|261211129|ref|ZP_05925418.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341]
 gi|262166595|ref|ZP_06034332.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223]
 gi|262170489|ref|ZP_06038167.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451]
 gi|262401861|ref|ZP_06078426.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586]
 gi|297581416|ref|ZP_06943339.1| ribosomal protein S13 [Vibrio cholerae RC385]
 gi|298500602|ref|ZP_07010406.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757]
 gi|32363415|sp|Q9KP05|RS13_VIBCH RecName: Full=30S ribosomal protein S13
 gi|9657160|gb|AAF95715.1| ribosomal protein S13 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|124113315|gb|EAY32135.1| ribosomal protein S13 [Vibrio cholerae 1587]
 gi|146316722|gb|ABQ21261.1| ribosomal protein S13 [Vibrio cholerae O395]
 gi|148873356|gb|EDL71491.1| ribosomal protein S13 [Vibrio cholerae 623-39]
 gi|149737818|gb|EDM52723.1| ribosomal protein S13 [Vibrio cholerae MZO-2]
 gi|150421841|gb|EDN13825.1| ribosomal protein S13 [Vibrio cholerae AM-19226]
 gi|227010579|gb|ACP06791.1| ribosomal protein S13 [Vibrio cholerae M66-2]
 gi|227014463|gb|ACP10673.1| ribosomal protein S13 [Vibrio cholerae O395]
 gi|229335128|gb|EEO00613.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae 12129(1)]
 gi|229341234|gb|EEO06238.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TM 11079-80]
 gi|229345890|gb|EEO10862.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae RC9]
 gi|229349374|gb|EEO14330.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae TMA 21]
 gi|229353176|gb|EEO18115.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae B33]
 gi|229354879|gb|EEO19800.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae BX 330286]
 gi|229369535|gb|ACQ59958.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae MJ-1236]
 gi|254846819|gb|EET25233.1| ribosomal protein S13 [Vibrio cholerae MO10]
 gi|255737982|gb|EET93375.1| SSU ribosomal protein S13p (S18e) [Vibrio cholera CIRS 101]
 gi|258582000|gb|EEW06870.1| 30S ribosomal protein S13 [Vibrio mimicus VM603]
 gi|258584922|gb|EEW09653.1| 30S ribosomal protein S13 [Vibrio mimicus VM573]
 gi|260839630|gb|EEX66241.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC341]
 gi|261891565|gb|EEY37551.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus MB-451]
 gi|262026311|gb|EEY44979.1| SSU ribosomal protein S13p (S18e) [Vibrio mimicus VM223]
 gi|262351833|gb|EEZ00964.1| SSU ribosomal protein S13p (S18e) [Vibrio sp. RC586]
 gi|297534254|gb|EFH73092.1| ribosomal protein S13 [Vibrio cholerae RC385]
 gi|297540771|gb|EFH76828.1| SSU ribosomal protein S13 [Vibrio cholerae MAK 757]
 gi|327485056|gb|AEA79463.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae LMA3894-4]
          Length = 118

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   L I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|229009644|ref|ZP_04166870.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048]
 gi|229131143|ref|ZP_04260055.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196]
 gi|229165123|ref|ZP_04292918.1| 30S ribosomal protein S13 [Bacillus cereus AH621]
 gi|228618386|gb|EEK75416.1| 30S ribosomal protein S13 [Bacillus cereus AH621]
 gi|228652356|gb|EEL08281.1| 30S ribosomal protein S13 [Bacillus cereus BDRD-ST196]
 gi|228751666|gb|EEM01466.1| 30S ribosomal protein S13 [Bacillus mycoides DSM 2048]
          Length = 121

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKILTEAGISSETRVRDLSEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|261854971|ref|YP_003262254.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2]
 gi|261835440|gb|ACX95207.1| 30S ribosomal protein S13 [Halothiobacillus neapolitanus c2]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 72/115 (62%), Positives = 84/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K VV AL  I+GIG   +Q IC    + P R+V  L ESEV  +R  +
Sbjct: 1   MARIAGINIPVQKHVVIALTSIYGIGTTRAQAICQASGVEPSRKVRDLSESEVEALRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + + VEGDLRR V+MNIKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   +
Sbjct: 61  AK-FIVEGDLRRDVSMNIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRR 114


>gi|317401571|gb|EFV82200.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans C54]
          Length = 121

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P +++V  L ++E+ ++R+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLSDAELERVREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|260102379|ref|ZP_05752616.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075]
 gi|260083823|gb|EEW67943.1| 30S ribosomal protein S13 [Lactobacillus helveticus DSM 20075]
 gi|323465846|gb|ADX69533.1| 30S ribosomal protein S13 [Lactobacillus helveticus H10]
 gi|328463388|gb|EGF35061.1| 30S ribosomal protein S13 [Lactobacillus helveticus MTCC 5463]
          Length = 116

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDVRSKDLTPEDQEKLRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|227879266|ref|ZP_03997136.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01]
 gi|256849159|ref|ZP_05554592.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US]
 gi|227861160|gb|EEJ68809.1| 30S ribosomal protein S13 [Lactobacillus crispatus JV-V01]
 gi|256713935|gb|EEU28923.1| 30S ribosomal protein S13 [Lactobacillus crispatus MV-1A-US]
          Length = 116

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVIALTYIYGIGEATAKKICAYAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|238763712|ref|ZP_04624671.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638]
 gi|238698014|gb|EEP90772.1| 30S ribosomal protein S13 [Yersinia kristensenii ATCC 33638]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|238855092|ref|ZP_04645420.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3]
 gi|256852060|ref|ZP_05557447.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN]
 gi|260661371|ref|ZP_05862284.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN]
 gi|260664877|ref|ZP_05865728.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US]
 gi|297205065|ref|ZP_06922461.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16]
 gi|313472573|ref|ZP_07813062.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153]
 gi|238832336|gb|EEQ24645.1| 30S ribosomal protein S13 [Lactobacillus jensenii 269-3]
 gi|239530013|gb|EEQ69014.1| 30S ribosomal protein S13 [Lactobacillus jensenii 1153]
 gi|256615472|gb|EEU20662.1| 30S ribosomal protein S13 [Lactobacillus jensenii 27-2-CHN]
 gi|260547826|gb|EEX23803.1| 30S ribosomal protein S13 [Lactobacillus jensenii 115-3-CHN]
 gi|260561360|gb|EEX27333.1| 30S ribosomal protein S13 [Lactobacillus jensenii SJ-7A-US]
 gi|297149643|gb|EFH29940.1| 30S ribosomal protein S13 [Lactobacillus jensenii JV-V16]
          Length = 116

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/116 (52%), Positives = 83/116 (71%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPREKRIVVALTYIYGIGEPTAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y+VEGDLRR ++MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 61  DK-YRVEGDLRREISMNIKRLVDIGSYRGVRHRRGLPVRGQNTKNNARTRKGSKRS 115


>gi|152972206|ref|YP_001337352.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206577841|ref|YP_002236301.1| ribosomal protein S13 [Klebsiella pneumoniae 342]
 gi|238896795|ref|YP_002921540.1| 30S ribosomal protein S13 [Klebsiella pneumoniae NTUH-K2044]
 gi|288933288|ref|YP_003437347.1| 30S ribosomal protein S13 [Klebsiella variicola At-22]
 gi|166231913|sp|A6TEV1|RS13_KLEP7 RecName: Full=30S ribosomal protein S13
 gi|226712749|sp|B5XNB4|RS13_KLEP3 RecName: Full=30S ribosomal protein S13
 gi|150957055|gb|ABR79085.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206566899|gb|ACI08675.1| ribosomal protein S13 [Klebsiella pneumoniae 342]
 gi|238549122|dbj|BAH65473.1| 30S ribosomal protein S13 [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|288888017|gb|ADC56335.1| 30S ribosomal protein S13 [Klebsiella variicola At-22]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   S+ IC +  I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FVVEGDLRREITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|157372755|ref|YP_001480744.1| 30S ribosomal protein S13 [Serratia proteamaculans 568]
 gi|166991603|sp|A8GKH6|RS13_SERP5 RecName: Full=30S ribosomal protein S13
 gi|157324519|gb|ABV43616.1| ribosomal protein S13 [Serratia proteamaculans 568]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAEHVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|94500970|ref|ZP_01307495.1| ribosomal protein S13 [Oceanobacter sp. RED65]
 gi|94426910|gb|EAT11893.1| ribosomal protein S13 [Oceanobacter sp. RED65]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++G+G  +++ IC  + I    ++  L + ++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVYGVGLPTAKQICKAVGIEESTKISDLSDEKLDELRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVSMNIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|239948297|ref|ZP_04700050.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922573|gb|EER22597.1| 30S ribosomal protein S13 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 125

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|85060234|ref|YP_455936.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans']
 gi|123518717|sp|Q2NQP4|RS13_SODGM RecName: Full=30S ribosomal protein S13
 gi|84780754|dbj|BAE75531.1| 30S ribosomal protein S13 [Sodalis glossinidius str. 'morsitans']
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++  +R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGKTRSQHICAATGIAEHVKISELSEEQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  TK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|288801122|ref|ZP_06406578.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332056|gb|EFC70538.1| 30S ribosomal protein S13 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 126

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGDLRSEIQMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRKG 113


>gi|212697277|ref|ZP_03305405.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848813|ref|ZP_08170323.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|212675726|gb|EEB35333.1| hypothetical protein ANHYDRO_01845 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480457|gb|EGC83519.1| 30S ribosomal protein S13 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 113

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/112 (53%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  S+Q+I  K  I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + DY +EGDLRR V+MNI+ L ++ CYRGLRH++GLPVRGQ T  NARTRK 
Sbjct: 61  D-DYTIEGDLRREVSMNIRNLREINCYRGLRHKKGLPVRGQNTKNNARTRKG 111


>gi|322380606|ref|ZP_08054758.1| 30S ribosomal protein S13 [Helicobacter suis HS5]
 gi|321146928|gb|EFX41676.1| 30S ribosomal protein S13 [Helicobacter suis HS5]
          Length = 120

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/120 (56%), Positives = 88/120 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI  K+ I  ++RVH L E ++  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILAKVNISLDKRVHDLSEDDISSITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QANYVVEGDLRKKVQMDIKALMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|254468398|ref|ZP_05081804.1| ribosomal protein S13p/S18e [beta proteobacterium KB13]
 gi|207087208|gb|EDZ64491.1| ribosomal protein S13p/S18e [beta proteobacterium KB13]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K    AL  I+GIG  ++Q+IC  + +    ++  L ++ V ++R  I
Sbjct: 1   MARIAGVNVPDNKHADIALTAIYGIGRTTAQNICKSVGVDAATKIKDLDDAAVEKLRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + YQ+EGDLRR V MNIKRLMDL CYRG RHRRGLPVRGQRT TNARTRK   +  
Sbjct: 61  AK-YQIEGDLRREVTMNIKRLMDLNCYRGQRHRRGLPVRGQRTKTNARTRKGPIRAI 116


>gi|312884681|ref|ZP_07744382.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367594|gb|EFP95145.1| 30S ribosomal protein S13 [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|283788066|ref|YP_003367931.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168]
 gi|282951520|emb|CBG91219.1| 30S ribosomal subunit protein S13 [Citrobacter rodentium ICC168]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGIGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|319942195|ref|ZP_08016511.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B]
 gi|319804248|gb|EFW01140.1| 30S ribosomal protein S13 [Sutterella wadsworthensis 3_1_45B]
          Length = 121

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I+GIG   S+ I  +  IP  ++V  L ++E+ +IR A+
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIYGIGRSRSRLILEQCGIPCTKKVQDLTDAELERIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V ++IKRL+DLG YRG+RHRRGLP RGQRT TNARTRK   K GV  
Sbjct: 61  SK-FTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPCRGQRTRTNARTRKGPRKVGVTL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|327399498|ref|YP_004340367.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
 gi|327182127|gb|AEA34308.1| 30S ribosomal protein S13 [Hippea maritima DSM 10411]
          Length = 119

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/121 (61%), Positives = 88/121 (72%), Gaps = 2/121 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV +PR K++  AL YI+GIG   S +I  K  I P++R H+L   E+ +IR  I
Sbjct: 1   MARIAGVELPRNKKIFIALTYIYGIGRTRSMEILKKANIDPDKRTHELTPEEIQRIRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             DY+VEG+LR+ VAMNIK LMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  V R
Sbjct: 61  -ADYKVEGELRKEVAMNIKALMDLGNYRGLRHRRGLPVRGQRTRTNARTRKG-KKKTVGR 118

Query: 121 K 121
           K
Sbjct: 119 K 119


>gi|284992849|ref|YP_003411403.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160]
 gi|284066094|gb|ADB77032.1| 30S ribosomal protein S13 [Geodermatophilus obscurus DSM 43160]
          Length = 126

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/117 (48%), Positives = 84/117 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   +++      + P+ RV  L + +++++R  I
Sbjct: 1   MARLAGVDLPRDKRMEIALTYIYGIGKTHAKETLAATGVSPDLRVRDLGDEDLLRLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           ++ ++VEGDLRR VA +I+R +++GCY+GLRHRRGLPV GQRT TNAR+ K   K  
Sbjct: 61  DEHFRVEGDLRREVAADIRRKVEIGCYQGLRHRRGLPVHGQRTRTNARSSKGPRKTI 117


>gi|163752894|ref|ZP_02160018.1| 30S ribosomal protein S13 [Kordia algicida OT-1]
 gi|161326626|gb|EDP97951.1| 30S ribosomal protein S13 [Kordia algicida OT-1]
          Length = 124

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   ++++     +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKHKRGVIALTYIFGVGRSRAKEVLATAKVSEDTKVSDWTDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y +EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GT-YTIEGELRTEVQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|325287071|ref|YP_004262861.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489]
 gi|324322525|gb|ADY29990.1| 30S ribosomal protein S13 [Cellulophaga lytica DSM 7489]
          Length = 124

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   +++I  K  +  + +V    + E+ +IR A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGVGRSRAKEILAKAQVSEDTKVSDWNDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EG+LR  + ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SE-FTIEGELRSEIQLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163783359|ref|ZP_02178352.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881467|gb|EDP74978.1| 30S ribosomal protein S13 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 105

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/105 (57%), Positives = 77/105 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  KR+  AL YI+GIG    ++IC    I   +RV +L   E+  +R+ I
Sbjct: 1   MARIAGVDLPDNKRLEIALTYIYGIGKTRVREICESTGIDCRKRVGELSPEELNTLRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           ++ Y+VEGDLRR V +NIKRLMD+GCYRGLRH RGLPVRGQ+T T
Sbjct: 61  DEHYKVEGDLRREVQLNIKRLMDMGCYRGLRHARGLPVRGQQTRT 105


>gi|157828838|ref|YP_001495080.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933565|ref|YP_001650354.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. Iowa]
 gi|166231921|sp|A8GT47|RS13_RICRS RecName: Full=30S ribosomal protein S13
 gi|189044290|sp|B0BUN8|RS13_RICRO RecName: Full=30S ribosomal protein S13
 gi|157801319|gb|ABV76572.1| 30S ribosomal protein S13 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908652|gb|ABY72948.1| SSU ribosomal protein S13P [Rickettsia rickettsii str. Iowa]
          Length = 125

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KRVV +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|50122929|ref|YP_052096.1| 30S ribosomal protein S13 [Pectobacterium atrosepticum SCRI1043]
 gi|81643772|sp|Q6CZZ2|RS13_ERWCT RecName: Full=30S ribosomal protein S13
 gi|49613455|emb|CAG76906.1| 30S ribosomal subunit protein S13 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQAICAATEIAENVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|33152932|ref|NP_874285.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP]
 gi|71153725|sp|Q7VKF5|RS13_HAEDU RecName: Full=30S ribosomal protein S13
 gi|33149157|gb|AAP96674.1| 30S ribosomal protein S13 [Haemophilus ducreyi 35000HP]
          Length = 118

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICVATGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  SK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|34558007|ref|NP_907822.1| 30S ribosomal protein S13 [Wolinella succinogenes DSM 1740]
 gi|81653421|sp|Q7M8F4|RS13_WOLSU RecName: Full=30S ribosomal protein S13
 gi|34483725|emb|CAE10722.1| 30S RIBOSOMAL PROTEIN S13 [Wolinella succinogenes]
          Length = 122

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG K+S+DI + + I  ++RV +L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKTSRDILSAVNISLDKRVQELSEDEVSLISKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   + 
Sbjct: 61  QESYAVEGDLRKKVTMDIKALMDLGSYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|257453245|ref|ZP_05618544.1| 30S ribosomal protein S13 [Fusobacterium sp. 3_1_5R]
 gi|257467160|ref|ZP_05631471.1| 30S ribosomal protein S13 [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918291|ref|ZP_07914531.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059779|ref|ZP_07924264.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
 gi|313685455|gb|EFS22290.1| SSU ribosomal protein S13P [Fusobacterium sp. 3_1_5R]
 gi|313692166|gb|EFS29001.1| SSU ribosomal protein S13P [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 118

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR+ I
Sbjct: 1   MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTEEEVNKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
               +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|58336653|ref|YP_193238.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM]
 gi|227903211|ref|ZP_04021016.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796]
 gi|75358065|sp|Q5FM67|RS13_LACAC RecName: Full=30S ribosomal protein S13
 gi|58253970|gb|AAV42207.1| 30S ribosomal protein S13 [Lactobacillus acidophilus NCFM]
 gi|227869016|gb|EEJ76437.1| 30S ribosomal protein S13 [Lactobacillus acidophilus ATCC 4796]
          Length = 116

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+V AL YI+GIG  +++ IC    +  + R   L   +  ++R  +
Sbjct: 1   MARIAGVDLPRDKRIVVALTYIYGIGDATAKKICADAGVSEDIRSKDLTPEDQEKLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           ++ Y+VEGDLRR V+MNIKRL+D+G YRG+RHRRGLPVRGQ T  NARTRK   +
Sbjct: 61  DK-YRVEGDLRREVSMNIKRLVDIGSYRGIRHRRGLPVRGQNTKNNARTRKGTKR 114


>gi|163786167|ref|ZP_02180615.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1]
 gi|159878027|gb|EDP72083.1| 30S ribosomal protein S13 [Flavobacteriales bacterium ALC-1]
          Length = 124

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V +L YI+G+G   +++I     +    +V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVISLTYIYGVGRSRAKEILATAKVDESTKVQDWSDDEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              +++EG+LR    MNIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GT-FKIEGELRSETQMNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|150008961|ref|YP_001303704.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503]
 gi|255014791|ref|ZP_05286917.1| 30S ribosomal protein S13 [Bacteroides sp. 2_1_7]
 gi|256841038|ref|ZP_05546545.1| 30S ribosomal protein S13 [Parabacteroides sp. D13]
 gi|298375806|ref|ZP_06985762.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19]
 gi|158706340|sp|A6LEG8|RS13_PARD8 RecName: Full=30S ribosomal protein S13
 gi|149937385|gb|ABR44082.1| 30S ribosomal protein S13 [Parabacteroides distasonis ATCC 8503]
 gi|256736881|gb|EEU50208.1| 30S ribosomal protein S13 [Parabacteroides sp. D13]
 gi|298266843|gb|EFI08500.1| 30S ribosomal protein S13 [Bacteroides sp. 3_1_19]
          Length = 126

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 56/113 (49%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  +++ + +K  +  + +V    + +  ++R+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSAAKSVLDKAGVDRDIKVKDWTDDQAAKVREV 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK 
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRVGLPLRGQSTKNNARTRKG 113


>gi|332181994|gb|AEE17682.1| 30S ribosomal protein S13 [Treponema brennaborense DSM 12168]
          Length = 121

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GIG  S+ +IC K  I P+  ++ L + ++  +R  I
Sbjct: 1   MARIAGVDLP-NKHVNIALTYIYGIGRSSADEICKKTKINPDAMINDLSQDDLAALRTVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + +Y+VEG LR  + +NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTR
Sbjct: 60  DGEYKVEGRLRSEIGLNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTR 109


>gi|315453713|ref|YP_004073983.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
 gi|315132765|emb|CBY83393.1| 30S ribosomal protein S13 [Helicobacter felis ATCC 49179]
          Length = 120

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/120 (57%), Positives = 90/120 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG KSS+DI +K+ I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKSSRDILHKVGISLDKRVHELGEDEVSSITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + ++ VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QANHIVEGDLRKKVQMDIKALMDLGSYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|304384299|ref|ZP_07366710.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973]
 gi|304334615|gb|EFM00897.1| 30S ribosomal protein S13 [Prevotella marshii DSM 16973]
          Length = 126

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL Y++GIG  SS  I +K  +  + +V +  + +  +IR  
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYVYGIGRSSSAKILDKAGVSRDLKVSEWTDDQAAKIRGI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEGDLR  V MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  ISAEFKVEGDLRTEVQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|251787993|ref|YP_003002714.1| 30S ribosomal protein S13 [Dickeya zeae Ech1591]
 gi|271502224|ref|YP_003335250.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586]
 gi|307132817|ref|YP_003884833.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937]
 gi|247536614|gb|ACT05235.1| ribosomal protein S13 [Dickeya zeae Ech1591]
 gi|270345779|gb|ACZ78544.1| 30S ribosomal protein S13 [Dickeya dadantii Ech586]
 gi|306530346|gb|ADN00277.1| 30S ribosomal subunit protein S13 [Dickeya dadantii 3937]
          Length = 118

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHTVIALTAIYGIGKTRSKSICAATGIAEDVKISELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREITLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|28377856|ref|NP_784748.1| 30S ribosomal protein S13 [Lactobacillus plantarum WCFS1]
 gi|254556041|ref|YP_003062458.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1]
 gi|300767844|ref|ZP_07077754.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180034|ref|YP_003924162.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|32363297|sp|Q88XW2|RS13_LACPL RecName: Full=30S ribosomal protein S13
 gi|28270689|emb|CAD63595.1| ribosomal protein S13 [Lactobacillus plantarum WCFS1]
 gi|254044968|gb|ACT61761.1| 30S ribosomal protein S13 [Lactobacillus plantarum JDM1]
 gi|300494829|gb|EFK29987.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045525|gb|ADN98068.1| 30S ribosomal protein S13 [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 121

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G+++PR KR+V  L YI+GIG  S+Q I  +  +  + RV  L   +  +IR  +
Sbjct: 1   MARIEGIDLPRDKRIVIGLTYIYGIGNTSAQKILAEAGVSEDVRVRDLTPDQEDKIRAVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+ EGDLRR V++NIK L ++G YRG+RHRRGLPVRGQ T  NARTRK        R
Sbjct: 61  D-GYKTEGDLRREVSLNIKLLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKGKKVSIAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300728419|ref|ZP_07061781.1| ribosomal protein S13p/S18e [Prevotella bryantii B14]
 gi|299774338|gb|EFI70968.1| ribosomal protein S13p/S18e [Prevotella bryantii B14]
          Length = 126

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 78/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI GIG  SS  I ++  +  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIFGIGRSSSAKILDQAGVNRDLKVSEWTDEQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I   ++VEGDLR  ++MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAGFKVEGDLRSEISMNIKRLMDIGCYRGIRHRNGLPVRGQSTKNNARTRKG 113


>gi|283780397|ref|YP_003371152.1| 30S ribosomal protein S13 [Pirellula staleyi DSM 6068]
 gi|283438850|gb|ADB17292.1| ribosomal protein S13 [Pirellula staleyi DSM 6068]
          Length = 127

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/121 (49%), Positives = 79/121 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K  V +L Y++G+G   ++++C K  I  E+R   L E E+ ++   +
Sbjct: 1   MPRLLGVDIPNDKPTVISLGYLYGVGDHVARELCQKAGIDTEKRARDLSEEELARLATLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY VEG LRR V  NI RL D+ CYRG+RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  ERDYTVEGPLRRLVQQNINRLRDIKCYRGIRHRLGLPVRGQRTKTNARTRKGPKKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|229524555|ref|ZP_04413960.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis
           VL426]
 gi|229338136|gb|EEO03153.1| SSU ribosomal protein S13p (S18e) [Vibrio cholerae bv. albensis
           VL426]
          Length = 118

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I   L I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGVGKTRSKAILADLGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|27364193|ref|NP_759721.1| 30S ribosomal protein S13 [Vibrio vulnificus CMCP6]
 gi|37678580|ref|NP_933189.1| 30S ribosomal protein S13 [Vibrio vulnificus YJ016]
 gi|320157579|ref|YP_004189958.1| 30S ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O]
 gi|32363317|sp|Q8DE61|RS13_VIBVU RecName: Full=30S ribosomal protein S13
 gi|71153726|sp|Q7MPG7|RS13_VIBVY RecName: Full=30S ribosomal protein S13
 gi|27360311|gb|AAO09248.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus CMCP6]
 gi|37197320|dbj|BAC93160.1| ribosomal protein S13 [Vibrio vulnificus YJ016]
 gi|319932891|gb|ADV87755.1| SSU ribosomal protein S13p (S18e) [Vibrio vulnificus MO6-24/O]
          Length = 118

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   + I  + ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAEDVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|298207750|ref|YP_003715929.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559]
 gi|83850388|gb|EAP88256.1| 30S ribosomal protein S13 [Croceibacter atlanticus HTCC2559]
          Length = 124

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q++     +  +++V    + E+ +IRQ +
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEVLKNANVSEDKKVSDWNDEEISRIRQQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EG+LR  V+++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GQ-FTIEGELRTEVSLSIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|257456914|ref|ZP_05622095.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580]
 gi|257445623|gb|EEV20685.1| 30S ribosomal protein S13 [Treponema vincentii ATCC 35580]
          Length = 125

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/116 (58%), Positives = 85/116 (73%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P  K V  AL YI+GI   S++ IC K  I P R ++ L + E+  IR  I
Sbjct: 1   MARISGVDLP-NKHVNIALTYIYGISHSSAKAICEKSKIDPMRMINDLNQDELAAIRAVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           +QDY+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TN+RTRK   + 
Sbjct: 60  DQDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNSRTRKGKKRP 115


>gi|67458692|ref|YP_246316.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2]
 gi|75536846|sp|Q4UMQ7|RS13_RICFE RecName: Full=30S ribosomal protein S13
 gi|67004225|gb|AAY61151.1| 30S ribosomal protein S13 [Rickettsia felis URRWXCal2]
          Length = 125

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297564063|ref|YP_003683036.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848512|gb|ADH70530.1| 30S ribosomal protein S13 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 126

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/110 (53%), Positives = 79/110 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++PR KRV  AL YI GIG   + +      +    RV++L E +++++R+ I
Sbjct: 1   MARIEGVDLPRDKRVEIALTYIFGIGRTRALETLKSTGVDGNTRVYELTEEDLVKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
             +YQVEGDLRR V  +I+R M++G Y+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  GSNYQVEGDLRREVQGDIRRKMEIGSYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|42520509|ref|NP_966424.1| 30S ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652512|sp|Q73HA7|RS13_WOLPM RecName: Full=30S ribosomal protein S13
 gi|42410248|gb|AAS14358.1| ribosomal protein S13 [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 122

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K V  AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINIPVRKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISGFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q+Y +EG+LR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK   +  +A 
Sbjct: 61  RQNYVIEGELRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|91786408|ref|YP_547360.1| 30S ribosomal protein S13 [Polaromonas sp. JS666]
 gi|123165434|sp|Q12G80|RS13_POLSJ RecName: Full=30S ribosomal protein S13
 gi|91695633|gb|ABE42462.1| SSU ribosomal protein S13P [Polaromonas sp. JS666]
          Length = 121

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   +++  L + ++ +IR  I
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEACDIAYSKKIKDLTDGDLEKIRDQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   A 
Sbjct: 61  -ALFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|89076302|ref|ZP_01162643.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34]
 gi|90581700|ref|ZP_01237488.1| 30S ribosomal protein S13 [Vibrio angustum S14]
 gi|89048006|gb|EAR53595.1| 30S ribosomal protein S13 [Photobacterium sp. SKA34]
 gi|90437115|gb|EAS62318.1| 30S ribosomal protein S13 [Vibrio angustum S14]
          Length = 118

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|22127882|ref|NP_671305.1| 30S ribosomal protein S13 [Yersinia pestis KIM 10]
 gi|45440089|ref|NP_991628.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597966|ref|YP_072157.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953]
 gi|108809233|ref|YP_653149.1| 30S ribosomal protein S13 [Yersinia pestis Antiqua]
 gi|108813998|ref|YP_649765.1| 30S ribosomal protein S13 [Yersinia pestis Nepal516]
 gi|145597472|ref|YP_001161547.1| 30S ribosomal protein S13 [Yersinia pestis Pestoides F]
 gi|150260721|ref|ZP_01917449.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125]
 gi|153948869|ref|YP_001402841.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758]
 gi|162419404|ref|YP_001605194.1| 30S ribosomal protein S13 [Yersinia pestis Angola]
 gi|165927875|ref|ZP_02223707.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165940335|ref|ZP_02228856.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010483|ref|ZP_02231381.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213241|ref|ZP_02239276.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398509|ref|ZP_02304033.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418694|ref|ZP_02310447.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425710|ref|ZP_02317463.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170022566|ref|YP_001719071.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis YPIII]
 gi|186897162|ref|YP_001874274.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+]
 gi|218927437|ref|YP_002345312.1| 30S ribosomal protein S13 [Yersinia pestis CO92]
 gi|229836287|ref|ZP_04456454.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A]
 gi|229840089|ref|ZP_04460248.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842171|ref|ZP_04462326.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904529|ref|ZP_04519640.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516]
 gi|270488253|ref|ZP_06205327.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27]
 gi|294502306|ref|YP_003566368.1| 30S ribosomal protein S13 [Yersinia pestis Z176003]
 gi|32363373|sp|Q8ZJ90|RS13_YERPE RecName: Full=30S ribosomal protein S13
 gi|81638250|sp|Q664U3|RS13_YERPS RecName: Full=30S ribosomal protein S13
 gi|123072596|sp|Q1C2W8|RS13_YERPA RecName: Full=30S ribosomal protein S13
 gi|123246110|sp|Q1CCW5|RS13_YERPN RecName: Full=30S ribosomal protein S13
 gi|158706296|sp|A4TH12|RS13_YERPP RecName: Full=30S ribosomal protein S13
 gi|166991605|sp|A7FNL3|RS13_YERP3 RecName: Full=30S ribosomal protein S13
 gi|226712809|sp|B2K515|RS13_YERPB RecName: Full=30S ribosomal protein S13
 gi|226712810|sp|A9R915|RS13_YERPG RecName: Full=30S ribosomal protein S13
 gi|226712811|sp|B1JIY3|RS13_YERPY RecName: Full=30S ribosomal protein S13
 gi|21961018|gb|AAM87556.1|AE014003_14 30S ribosomal subunit protein S13 [Yersinia pestis KIM 10]
 gi|45434944|gb|AAS60505.1| 30S ribosomal protein S13 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591248|emb|CAH22914.1| 30S ribosomal protein S13 [Yersinia pseudotuberculosis IP 32953]
 gi|108777646|gb|ABG20165.1| SSU ribosomal protein S13P [Yersinia pestis Nepal516]
 gi|108781146|gb|ABG15204.1| SSU ribosomal protein S13P [Yersinia pestis Antiqua]
 gi|115346048|emb|CAL18914.1| 30S ribosomal protein S13 [Yersinia pestis CO92]
 gi|145209168|gb|ABP38575.1| SSU ribosomal protein S13P [Yersinia pestis Pestoides F]
 gi|149290129|gb|EDM40206.1| 30S ribosomal protein S13 [Yersinia pestis CA88-4125]
 gi|152960364|gb|ABS47825.1| ribosomal protein S13 [Yersinia pseudotuberculosis IP 31758]
 gi|162352219|gb|ABX86167.1| ribosomal protein S13 [Yersinia pestis Angola]
 gi|165911725|gb|EDR30381.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920151|gb|EDR37452.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165990573|gb|EDR42874.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205539|gb|EDR50019.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962688|gb|EDR58709.1| ribosomal protein S13 [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051013|gb|EDR62421.1| ribosomal protein S13 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055400|gb|EDR65194.1| ribosomal protein S13 [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749100|gb|ACA66618.1| ribosomal protein S13 [Yersinia pseudotuberculosis YPIII]
 gi|186700188|gb|ACC90817.1| ribosomal protein S13 [Yersinia pseudotuberculosis PB1/+]
 gi|229678647|gb|EEO74752.1| 30S ribosomal subunit protein S13 [Yersinia pestis Nepal516]
 gi|229690481|gb|EEO82535.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696455|gb|EEO86502.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706355|gb|EEO92362.1| 30S ribosomal subunit protein S13 [Yersinia pestis Pestoides A]
 gi|262360386|gb|ACY57107.1| 30S ribosomal protein S13 [Yersinia pestis D106004]
 gi|262364337|gb|ACY60894.1| 30S ribosomal protein S13 [Yersinia pestis D182038]
 gi|270336757|gb|EFA47534.1| 30S ribosomal protein S13 [Yersinia pestis KIM D27]
 gi|294352765|gb|ADE63106.1| 30S ribosomal protein S13 [Yersinia pestis Z176003]
 gi|320013364|gb|ADV96935.1| 30S ribosomal subunit protein S13 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 118

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGKTRSQAICVAAGIAEHVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|320103639|ref|YP_004179230.1| 30S ribosomal protein S13P [Isosphaera pallida ATCC 43644]
 gi|319750921|gb|ADV62681.1| SSU ribosomal protein S13P [Isosphaera pallida ATCC 43644]
          Length = 127

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/121 (46%), Positives = 76/121 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K    +L YI+GIG   + ++C +L I P +R   L E E+ +I   +
Sbjct: 1   MPRLLGVDIPNDKPTQYSLRYIYGIGPTLALEVCQRLNIDPSKRARDLTEEELARIAALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEG LRR + + I RL  + CYRGLRHR+ LPVRGQRT TNARTRK   +    +
Sbjct: 61  DNEYTVEGQLRRQIQLAIGRLQAISCYRGLRHRKKLPVRGQRTRTNARTRKGPRRTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|296111452|ref|YP_003621834.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154]
 gi|295832984|gb|ADG40865.1| 30S ribosomal protein S13 [Leuconostoc kimchii IMSNU 11154]
          Length = 123

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/123 (44%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR  +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLVEAGVSEDVRVRDLSADQEDAIRATV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++ + Q+EGDLRR V+++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DKLNLQLEGDLRRKVSLDIKGLQEIASYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +++
Sbjct: 121 KRK 123


>gi|311277747|ref|YP_003939978.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1]
 gi|308746942|gb|ADO46694.1| 30S ribosomal protein S13 [Enterobacter cloacae SCF1]
          Length = 118

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEGQIDTLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|256544530|ref|ZP_05471903.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170]
 gi|256399855|gb|EEU13459.1| ribosomal protein S13/S18 [Anaerococcus vaginalis ATCC 51170]
          Length = 113

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/112 (53%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  S+Q+I  K  I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + DY +EGDLRR V+MNI+ L ++ CYRG+RH+RGLPVRGQ T  NARTRK 
Sbjct: 61  D-DYTIEGDLRREVSMNIRNLREINCYRGIRHKRGLPVRGQNTKNNARTRKG 111


>gi|330430074|gb|AEC21408.1| 30S ribosomal protein S13 [Pusillimonas sp. T7-7]
          Length = 121

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    I   ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPHQHAEIGLTAIFGIGRTRARKICESAGIELSKKVKDLTDAELERIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|331702056|ref|YP_004399015.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929]
 gi|329129399|gb|AEB73952.1| 30S ribosomal protein S13 [Lactobacillus buchneri NRRL B-30929]
          Length = 120

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI GIG  ++Q +  K  +  + RV  L   +  +IR+ +
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIFGIGNTTAQKVLAKAGVSEDVRVRDLTPDQEDKIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             D ++EGDLRR V+MNIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK   K    R
Sbjct: 61  G-DLKIEGDLRREVSMNIKRLQEIGSYRGMRHRRGLPVRGQHTKNNARTRKG-SKVAAGR 118

Query: 121 KR 122
           ++
Sbjct: 119 RK 120


>gi|148652259|ref|YP_001279352.1| 30S ribosomal protein S13 [Psychrobacter sp. PRwf-1]
 gi|172048488|sp|A5WCL1|RS13_PSYWF RecName: Full=30S ribosomal protein S13
 gi|148571343|gb|ABQ93402.1| SSU ribosomal protein S13P [Psychrobacter sp. PRwf-1]
          Length = 118

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  +++ I + + I P  ++ QL ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTTAKKILDTVGIAPTTKISQLDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +Y  EGDLRR V+MNIKRL+DLGCYRG+RHRR LPVRGQ T  NARTRK   +  
Sbjct: 61  G-NYMTEGDLRREVSMNIKRLVDLGCYRGIRHRRNLPVRGQNTKNNARTRKGPIRSI 116


>gi|114330595|ref|YP_746817.1| 30S ribosomal protein S13 [Nitrosomonas eutropha C91]
 gi|122314411|sp|Q0AIH4|RS13_NITEC RecName: Full=30S ribosomal protein S13
 gi|114307609|gb|ABI58852.1| SSU ribosomal protein S13P [Nitrosomonas eutropha C91]
          Length = 119

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 87/120 (72%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V  AL  I+GIG  +++ IC  L IPP  ++ +L + ++ ++R +I
Sbjct: 1   MARIAGVNLPSNKHVNIALTAIYGIGNSTARKICTDLDIPPFIKLKELTDGKLEELRNSI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR V+MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK   K   AR
Sbjct: 61  AK-LLVEGDLRREVSMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRKGPRKAIRAR 119


>gi|21674974|ref|NP_663039.1| 30S ribosomal protein S13 [Chlorobium tepidum TLS]
 gi|32363337|sp|Q8KAJ5|RS13_CHLTE RecName: Full=30S ribosomal protein S13
 gi|21648206|gb|AAM73381.1| ribosomal protein S13 [Chlorobium tepidum TLS]
          Length = 125

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/115 (52%), Positives = 80/115 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL Y++GIG  S+++I  K  + P++++ +L + E   IR+ I  
Sbjct: 2   RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +Y VEG+ R    ++IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 62  EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKTV 116


>gi|12045028|ref|NP_072838.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|255660324|ref|ZP_05405733.1| 30S ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|1350932|sp|P47421|RS13_MYCGE RecName: Full=30S ribosomal protein S13
 gi|3844771|gb|AAC71394.1| ribosomal protein S13 [Mycoplasma genitalium G37]
 gi|166079035|gb|ABY79653.1| ribosomal protein S13 [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 124

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 83/121 (68%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI G++IP  KR+  AL YI GIG  S++ I  K  I P++RV  L E E++ IR A 
Sbjct: 1   MARILGIDIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EGDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK   K    +
Sbjct: 60  ASGYKIEGDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRKGPRKTVANK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|322831094|ref|YP_004211121.1| 30S ribosomal protein S13 [Rahnella sp. Y9602]
 gi|321166295|gb|ADW71994.1| 30S ribosomal protein S13 [Rahnella sp. Y9602]
          Length = 118

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I    ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDQKHTVIALTSIYGIGKTRSQSICAASGIAENVKISELSEEQIEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-FIVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|303237462|ref|ZP_07324027.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN]
 gi|302482282|gb|EFL45312.1| 30S ribosomal protein S13 [Prevotella disiens FB035-09AN]
          Length = 126

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/113 (53%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  SS  I +K  I  + +V +  + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQEKRGEIALTYIYGIGRSSSAKILDKAGINRDLKVSEWSDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +++VEG+LR  + MNIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  IGAEFKVEGELRSEIQMNIKRLMDIGCYRGVRHRNGLPVRGQSTKNNARTRKG 113


>gi|16272741|ref|NP_438959.1| 30S ribosomal protein S13 [Haemophilus influenzae Rd KW20]
 gi|1173196|sp|P44380|RS13_HAEIN RecName: Full=30S ribosomal protein S13
 gi|1573810|gb|AAC22458.1| ribosomal protein S13 (rpS13) [Haemophilus influenzae Rd KW20]
          Length = 122

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/111 (58%), Positives = 80/111 (72%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ IC    I  + ++ +L E ++ ++R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAICAAAGIAEDVKIRELSEEQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            + + VEGDLRR V +NIKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK
Sbjct: 61  GK-FTVEGDLRREVTLNIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRK 110


>gi|120437152|ref|YP_862838.1| 30S ribosomal protein S13 [Gramella forsetii KT0803]
 gi|158706234|sp|A0M576|RS13_GRAFK RecName: Full=30S ribosomal protein S13
 gi|117579302|emb|CAL67771.1| 30S ribosomal protein S13 [Gramella forsetii KT0803]
          Length = 124

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   +Q+I  +  +   ++V    + E+ +IR+A+
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGRSRAQEILAQAKVDESKKVSDWDDDEIGKIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EG+LR  V ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GQ-FTIEGELRTEVQISIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|124268604|ref|YP_001022608.1| 30S ribosomal protein S13 [Methylibium petroleiphilum PM1]
 gi|158706441|sp|A2SLD4|RS13_METPP RecName: Full=30S ribosomal protein S13
 gi|124261379|gb|ABM96373.1| SSU ribosomal protein S13P [Methylibium petroleiphilum PM1]
          Length = 121

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K     L  I+GIG  ++Q IC+   I  ++++  L + ++ +IR+ +
Sbjct: 1   MARIAGINIPPQKHAEIGLTAIYGIGRTTAQKICDSCGIARDKKIKDLTDGDLEKIREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   +EGDLRR   +NIKRLMDLGCYRG RHRRGLP+RGQRT TNARTRK   K   A 
Sbjct: 61  GR-MTIEGDLRRETTINIKRLMDLGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKSAAAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|257463988|ref|ZP_05628373.1| 30S ribosomal protein S13 [Fusobacterium sp. D12]
 gi|317061510|ref|ZP_07925995.1| SSU ribosomal protein S13P [Fusobacterium sp. D12]
 gi|313687186|gb|EFS24021.1| SSU ribosomal protein S13P [Fusobacterium sp. D12]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L + E+ +IR+ I
Sbjct: 1   MARVAGVDIPRNKRVEIALTYIYGIGRPTSQKVLKEAGVNFDTRVKDLTDDEINKIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
               +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  -NGIKVEGDLRKEVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|260770935|ref|ZP_05879864.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972]
 gi|260614172|gb|EEX39362.1| SSU ribosomal protein S13p (S18e) [Vibrio furnissii CIP 102972]
 gi|315178981|gb|ADT85895.1| 30S ribosomal protein S13 [Vibrio furnissii NCTC 11218]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/117 (58%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAEHVKISELTEDQINQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|330718949|ref|ZP_08313549.1| 30S ribosomal protein S13 [Leuconostoc fallax KCTC 3537]
          Length = 123

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/123 (46%), Positives = 83/123 (67%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KR+V  L YI+GIG  ++Q +  +  +  + RV  L   +   IR A+
Sbjct: 1   MARIAGIDLPRDKRIVIGLTYIYGIGNTTAQKVLTEAKVSEDVRVRDLTSDQEDAIRAAV 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +Q + Q+EGDLRR ++++IK L ++  YRG+RHR+GLPVRGQ T  NARTRK   K    
Sbjct: 61  DQLNLQLEGDLRRKISLDIKGLQEIAAYRGIRHRKGLPVRGQNTKNNARTRKGPAKAIAG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|320538144|ref|ZP_08038039.1| 30S ribosomal protein S13 [Treponema phagedenis F0421]
 gi|320144961|gb|EFW36682.1| 30S ribosomal protein S13 [Treponema phagedenis F0421]
          Length = 121

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 68/110 (61%), Positives = 83/110 (75%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  AL YI+GI   S++ IC K  I P R ++ L + E+  IR  +
Sbjct: 1   MARIAGVDLP-NKHVNIALTYIYGISHSSAKTICEKAKIDPGRMMNDLDQDELAVIRSIL 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E+DY+VEG LR  VA+NIKRLMD+GCYRGLRHR+GLPVRGQRT TNARTR
Sbjct: 60  EKDYKVEGRLRTEVALNIKRLMDIGCYRGLRHRKGLPVRGQRTRTNARTR 109


>gi|326334522|ref|ZP_08200733.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325693291|gb|EGD35219.1| 30S ribosomal protein S13 [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 124

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I  K  +  + +V    + ++ +IR+A+
Sbjct: 1   MARIAGIDLPKHKRGVIGLTYIFGIGKSRAKEILKKAQVDEDIKVSDWNDEQITRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|81429354|ref|YP_396355.1| 30S ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K]
 gi|91207704|sp|Q38UT5|RS13_LACSS RecName: Full=30S ribosomal protein S13
 gi|78610997|emb|CAI56049.1| 30S Ribosomal protein S13 [Lactobacillus sakei subsp. sakei 23K]
          Length = 121

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI GIG  ++  +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRDKQIVIALTYIFGIGNTTAVKVLADAGVPTDVRTRDLTPDQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V++NIKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DT-VKVEGDLRREVSLNIKRLQEIGSYRGMRHRRGLPVRGQNTKNNARTRKGKKVSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|78484661|ref|YP_390586.1| 30S ribosomal protein S13 [Thiomicrospira crunogena XCL-2]
 gi|91207630|sp|Q31IW1|RS13_THICR RecName: Full=30S ribosomal protein S13
 gi|78362947|gb|ABB40912.1| SSU ribosomal protein S13P [Thiomicrospira crunogena XCL-2]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K +V  L  I+G+G  ++Q IC  + I P  +V +L E ++  +R  +
Sbjct: 1   MARIAGVNIPVNKHIVIGLRSIYGVGQTTAQKICADVNIDPTTKVRELTEEQLEALRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +++EGDLRR V MNIKRLMD+GCYRG+RHRR LP+RGQRT  NARTRK   K  
Sbjct: 61  TK-FKIEGDLRRDVTMNIKRLMDMGCYRGIRHRRSLPLRGQRTKNNARTRKGPKKPI 116


>gi|262273357|ref|ZP_06051171.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886]
 gi|262222335|gb|EEY73646.1| SSU ribosomal protein S13p (S18e) [Grimontia hollisae CIP 101886]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I  +  I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAESTKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|154494403|ref|ZP_02033723.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC
           43184]
 gi|218262264|ref|ZP_03476787.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii
           DSM 18315]
 gi|154085847|gb|EDN84892.1| hypothetical protein PARMER_03758 [Parabacteroides merdae ATCC
           43184]
 gi|218223487|gb|EEC96137.1| hypothetical protein PRABACTJOHN_02461 [Parabacteroides johnsonii
           DSM 18315]
          Length = 126

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  +S+ I +K  I  + +V    + +  ++R+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEIALTYIYGIGRSASKSILDKAGIDRDIKVKDWTDDQAAKVREV 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I  +Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK 
Sbjct: 61  IGAEYKVEGDLRSEVQLNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRKG 113


>gi|254281884|ref|ZP_04956852.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B]
 gi|219678087|gb|EED34436.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR51-B]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   ++ +C    +    +V  L E ++ Q+R  +
Sbjct: 1   MARIAGVNIPDHKHAVVSLTYIYGVGRTQAKKLCAVTGVDEATKVADLNEGQLDQLRSLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   +EGDLRR V+MNIKRLMDLGC RGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  SE-MTIEGDLRREVSMNIKRLMDLGCNRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|33594504|ref|NP_882148.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I]
 gi|33594775|ref|NP_882418.1| 30S ribosomal protein S13 [Bordetella parapertussis 12822]
 gi|33599047|ref|NP_886607.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50]
 gi|81424286|sp|Q7VTA8|RS13_BORPE RecName: Full=30S ribosomal protein S13
 gi|81425890|sp|Q7W2D2|RS13_BORPA RecName: Full=30S ribosomal protein S13
 gi|81432513|sp|Q7WRA0|RS13_BORBR RecName: Full=30S ribosomal protein S13
 gi|33564580|emb|CAE43896.1| 30S ribosomal protein S13 [Bordetella pertussis Tohama I]
 gi|33564851|emb|CAE39795.1| 30S ribosomal protein S13 [Bordetella parapertussis]
 gi|33575093|emb|CAE30556.1| 30S ribosomal protein S13 [Bordetella bronchiseptica RB50]
          Length = 121

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P  ++V  L ++E+ +IR+ I
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAAGVPVTKKVKDLTDAELERIREHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-VFAVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|209693945|ref|YP_002261873.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238]
 gi|208007896|emb|CAQ78026.1| 30S ribosomal protein S13 [Aliivibrio salmonicida LFI1238]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I   + I  + ++ +L + ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKISELNDEQIDILRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|330814178|ref|YP_004358417.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487273|gb|AEA81678.1| SSU ribosomal protein S13p (S18e) [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 127

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+N+P  K+V  AL YI+GIG   ++ IC +L I   +RV+ L E EV+++R+ I
Sbjct: 1   MARISGINLPLNKQVYIALQYIYGIGDHYAEKICKELNIDRSKRVNNLTEDEVLKVRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRTH+NARTRK        +
Sbjct: 61  DKNYSVEGDLRRDISLNIKRLRDLGTYRGTRHRKKLPVRGQRTHSNARTRKGKAIAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|165977218|ref|YP_001652811.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|167855328|ref|ZP_02478096.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755]
 gi|190151136|ref|YP_001969661.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|219871574|ref|YP_002475949.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165]
 gi|223042025|ref|ZP_03612206.1| 30S ribosomal protein S13 [Actinobacillus minor 202]
 gi|240948153|ref|ZP_04752556.1| 30S ribosomal protein S13 [Actinobacillus minor NM305]
 gi|254362775|ref|ZP_04978857.1| ribosomal protein S13 [Mannheimia haemolytica PHL213]
 gi|261492714|ref|ZP_05989262.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495671|ref|ZP_05992117.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|303250034|ref|ZP_07336236.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303253208|ref|ZP_07339357.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307246711|ref|ZP_07528781.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307248852|ref|ZP_07530865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307251080|ref|ZP_07533004.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307253466|ref|ZP_07535337.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307255696|ref|ZP_07537500.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307257880|ref|ZP_07539636.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307260148|ref|ZP_07541858.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307262276|ref|ZP_07543925.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307264485|ref|ZP_07546070.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|153094404|gb|EDN75253.1| ribosomal protein S13 [Mannheimia haemolytica PHL213]
 gi|165877319|gb|ABY70367.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|167853586|gb|EDS24832.1| 30S ribosomal protein S13 [Haemophilus parasuis 29755]
 gi|189916267|gb|ACE62519.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|219691778|gb|ACL33001.1| 30S ribosomal protein S13 [Haemophilus parasuis SH0165]
 gi|223017187|gb|EEF15618.1| 30S ribosomal protein S13 [Actinobacillus minor 202]
 gi|240297506|gb|EER48013.1| 30S ribosomal protein S13 [Actinobacillus minor NM305]
 gi|261308778|gb|EEY10035.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311567|gb|EEY12722.1| ribosomal protein S13 [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|302647890|gb|EFL78097.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302651097|gb|EFL81251.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306852411|gb|EFM84646.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306854779|gb|EFM86969.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306856910|gb|EFM89042.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306859145|gb|EFM91187.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306861373|gb|EFM93363.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306863610|gb|EFM95537.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865794|gb|EFM97672.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868039|gb|EFM99866.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306870182|gb|EFN01941.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 118

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|59710866|ref|YP_203642.1| 30S ribosomal protein S13 [Vibrio fischeri ES114]
 gi|197333946|ref|YP_002155018.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11]
 gi|75354725|sp|Q5E892|RS13_VIBF1 RecName: Full=30S ribosomal protein S13
 gi|59478967|gb|AAW84754.1| 30S ribosomal subunit protein S13 [Vibrio fischeri ES114]
 gi|197315436|gb|ACH64883.1| 30S ribosomal protein S13 [Vibrio fischeri MJ11]
          Length = 118

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L + ++  +R  +
Sbjct: 1   MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAEVGIAEDVKISELNDEQIDILRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|257454068|ref|ZP_05619342.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60]
 gi|257448546|gb|EEV23515.1| 30S ribosomal protein S13 [Enhydrobacter aerosaccus SK60]
          Length = 118

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  + +L YI GIG  ++  I   + I P  ++ +L ++++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAIISLTYIFGIGRTTAAKILEAVNIAPTTKISELNDTQLDAVRTQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y  EGDLRR ++MNIKRL+DLGCYRGLRHRRGLPV GQRT TNARTRK   K  
Sbjct: 61  AE-YATEGDLRREISMNIKRLVDLGCYRGLRHRRGLPVNGQRTKTNARTRKGPRKAI 116


>gi|293602601|ref|ZP_06685044.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553]
 gi|311109579|ref|YP_003982432.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8]
 gi|292818973|gb|EFF78011.1| 30S ribosomal protein S13 [Achromobacter piechaudii ATCC 43553]
 gi|310764268|gb|ADP19717.1| 30S ribosomal protein S13 [Achromobacter xylosoxidans A8]
          Length = 121

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P +++V  L ++E+ ++R+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPFDKKVKDLNDAELERVREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-LFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|238898905|ref|YP_002924587.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259494682|sp|C4K796|RS13_HAMD5 RecName: Full=30S ribosomal protein S13
 gi|229466665|gb|ACQ68439.1| 30S ribosomal subunit protein S13 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 118

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG  ++ DIC K  +    ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDKKHAVIALTSIYGIGRTTALDICAKTGVSAAVKISELSEKQIEELREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRLMD+G YRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVTLNIKRLMDIGTYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|58584578|ref|YP_198151.1| 30S ribosomal protein S13 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497932|sp|Q5GSW5|RS13_WOLTR RecName: Full=30S ribosomal protein S13
 gi|58418894|gb|AAW70909.1| Ribosomal protein S13 [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 122

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K +   L YI+GIG  ++  IC+   I   +RV +L + ++ +I   I
Sbjct: 1   MTRIAGVNVPVKKCIPFGLTYIYGIGISTANIICHACGIDKSKRVSELRDKDIEKINSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q+Y +EGDLR+ VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK   +  +A 
Sbjct: 61  RQNYSIEGDLRKEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGKSRLPIAG 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|30248440|ref|NP_840510.1| 30S ribosomal protein S13 [Nitrosomonas europaea ATCC 19718]
 gi|32363227|sp|P59755|RS13_NITEU RecName: Full=30S ribosomal protein S13
 gi|30138326|emb|CAD84334.1| Ribosomal protein S13 [Nitrosomonas europaea ATCC 19718]
          Length = 119

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V  AL  I+GIG  +++ IC+ L IPP  ++  L + ++ ++R+++
Sbjct: 1   MARIAGVNLPSNKHVNIALTAIYGIGNTTARKICSDLQIPPFIKLKDLEDIKLDELRESV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +   VEGDLRR ++MNIKRL+DLG YRGLRHRRGLPVRGQRT TNARTRK   K   A+
Sbjct: 61  SK-LIVEGDLRREISMNIKRLIDLGSYRGLRHRRGLPVRGQRTKTNARTRKGPRKAIGAK 119


>gi|295398312|ref|ZP_06808354.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563]
 gi|294973451|gb|EFG49236.1| 30S ribosomal protein S13 [Aerococcus viridans ATCC 11563]
          Length = 121

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V AL YI+GIG  +SQ I  +  I  + RV  L   E+ ++R A+
Sbjct: 1   MARIAGVDIPREKRIVIALTYIYGIGKTTSQKILAQAEISEDTRVRDLTNDELDRLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR  A++IKRL ++G YRG+RHRRGLPVRGQ T  NARTRK        +
Sbjct: 61  DT-IKVEGDLRRERALDIKRLQEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIQGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|332170582|gb|AEE19837.1| 30S ribosomal protein S13 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 124

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   +++I     +  +++V    + E+ +IR A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRAEEILAAANVSEDKKVSDWDDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163859248|ref|YP_001633546.1| 30S ribosomal protein S13 [Bordetella petrii DSM 12804]
 gi|226712701|sp|A9IHS0|RS13_BORPD RecName: Full=30S ribosomal protein S13
 gi|163262976|emb|CAP45279.1| 30S ribosomal protein S13 [Bordetella petrii]
          Length = 121

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I GIG   ++ IC    +P  ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGIGRTRARKICEAANVPLSKKVKDLTDAELERIREHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|228472158|ref|ZP_04056924.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624]
 gi|228276361|gb|EEK15085.1| 30S ribosomal protein S13 [Capnocytophaga gingivalis ATCC 33624]
          Length = 124

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I     +  + +V    + ++ +IR+A+
Sbjct: 1   MARIAGIDLPKHKRGVIGLTYIFGIGRSRAKEILKTAQVDEDIKVSDWNDEQITRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  SS-YKIEGELRSEVQLNIKRLMDIGCYRGIRHRSGLPLRGQKTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|88812735|ref|ZP_01127981.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231]
 gi|88789973|gb|EAR21094.1| 30S ribosomal protein S13 [Nitrococcus mobilis Nb-231]
          Length = 118

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K    AL  I+GIG   +  IC    I PE ++ +L E+E+  +R  +
Sbjct: 1   MARIAGVNIPANKHTAIALTSIYGIGRSCAAAICRATGIAPECKIQELTEAELEHLRGEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR VAM+IKRLMDLGCYRG+RHRRGL VRGQRT TNARTRK   +  
Sbjct: 61  GK-YVIEGDLRRQVAMDIKRLMDLGCYRGIRHRRGLSVRGQRTRTNARTRKGPRRAI 116


>gi|77414587|ref|ZP_00790730.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515]
 gi|77159385|gb|EAO70553.1| ribosomal protein S13p/S18e [Streptococcus agalactiae 515]
          Length = 110

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/111 (55%), Positives = 78/111 (70%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLSTSKKILAAAGISEDIRVKDLTPDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRK 110


>gi|329893621|ref|ZP_08269755.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088]
 gi|328923548|gb|EGG30860.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC3088]
          Length = 118

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+G+G   ++++C    I  + ++  L E+++ ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGVGKTKAKELCAATNIAEDTKIGDLSEAQMDELRGKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK   K  
Sbjct: 61  GE-MMVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRKGPRKPI 116


>gi|260772118|ref|ZP_05881035.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14]
 gi|260612985|gb|EEX38187.1| SSU ribosomal protein S13p (S18e) [Vibrio metschnikovii CIP 69.14]
          Length = 118

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/117 (57%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I   + I    ++ +L E ++ Q+R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILADVGIAESVKISELTEEQIDQLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|34581391|ref|ZP_00142871.1| 30S ribosomal protein S13 [Rickettsia sibirica 246]
 gi|229586987|ref|YP_002845488.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5]
 gi|238650950|ref|YP_002916806.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic]
 gi|259494689|sp|C3PP85|RS13_RICAE RecName: Full=30S ribosomal protein S13
 gi|259494690|sp|C4K2F7|RS13_RICPU RecName: Full=30S ribosomal protein S13
 gi|28262776|gb|EAA26280.1| 30S ribosomal protein S13 [Rickettsia sibirica 246]
 gi|228022037|gb|ACP53745.1| 30S ribosomal protein S13 [Rickettsia africae ESF-5]
 gi|238625048|gb|ACR47754.1| 30S ribosomal protein S13 [Rickettsia peacockii str. Rustic]
          Length = 125

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|296120767|ref|YP_003628545.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776]
 gi|296013107|gb|ADG66346.1| ribosomal protein S13 [Planctomyces limnophilus DSM 3776]
          Length = 128

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/121 (49%), Positives = 80/121 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K    +L Y++G+G   + +IC KL I P+R+  +L + E+ +I   +
Sbjct: 1   MPRIQGVDIPNDKPTYISLQYLYGVGDFRAFEICFKLEIDPQRKARELSDDELARISAML 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEG LRR++  NI RL D+  YRGLRHRRGLP RGQRT TNARTRK   K    +
Sbjct: 61  DKDYLVEGSLRRSIQQNISRLRDIQSYRGLRHRRGLPCRGQRTRTNARTRKGIKKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|157964784|ref|YP_001499608.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5]
 gi|166991602|sp|A8F2C5|RS13_RICM5 RecName: Full=30S ribosomal protein S13
 gi|157844560|gb|ABV85061.1| 30S ribosomal protein S13 [Rickettsia massiliae MTU5]
          Length = 125

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP +KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDSKRLVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89093593|ref|ZP_01166541.1| ribosomal protein S13 [Oceanospirillum sp. MED92]
 gi|89082283|gb|EAR61507.1| ribosomal protein S13 [Oceanospirillum sp. MED92]
          Length = 118

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI+GIG  ++ DI     I P  ++  L + ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIYGIGRTTASDILEACGIAPSTKIADLSDEQLDIVRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++M+IKRLMDLGC+RG+RHRR LPVRGQR+ TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREISMSIKRLMDLGCFRGIRHRRNLPVRGQRSKTNARTRKGPRKPI 116


>gi|291280124|ref|YP_003496959.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1]
 gi|290754826|dbj|BAI81203.1| 30S ribosomal protein S13 [Deferribacter desulfuricans SSM1]
          Length = 122

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K+V   L YI GIG  +++ I  +  I   +R+ +L E E+  IR+ I
Sbjct: 1   MARIAGVDVPNNKKVEIGLTYIFGIGRSTAKKIVEETGIDSNKRIGELSEQEISSIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119
           + + +VEG+LR+ + +NIKRLM++ CYRG RH+  +P RGQ+T +NARTR+   GK G+ 
Sbjct: 61  DSNLKVEGELRKEIGLNIKRLMEINCYRGYRHKNNMPCRGQKTRSNARTRRGLAGKRGIK 120

Query: 120 RK 121
           RK
Sbjct: 121 RK 122


>gi|330447015|ref|ZP_08310665.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491206|dbj|GAA05162.1| 30S ribosomal subunit protein S13 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 118

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ I  +  I  + ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHAVIALTAIYGIGKTRSKAILAETGIAEDVKISELTEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|308387977|pdb|3OFO|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|309320035|pdb|3OFA|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The First 70s Ribosome.
 gi|309320139|pdb|3OFX|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome.
 gi|315113624|pdb|3OAQ|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome
          Length = 114

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 1/115 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K 
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKP 114


>gi|89902967|ref|YP_525438.1| 30S ribosomal protein S13 [Rhodoferax ferrireducens T118]
 gi|122478014|sp|Q21QP6|RS13_RHOFD RecName: Full=30S ribosomal protein S13
 gi|89347704|gb|ABD71907.1| SSU ribosomal protein S13P [Rhodoferax ferrireducens T118]
          Length = 121

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I G+G   ++ IC+   I   ++V  L + E+ +IR  +
Sbjct: 1   MARIAGINIPPQQHSEIGLTAIFGVGRNRARKICDACGIAYSKKVKDLTDLELEKIRDQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q + +EGDLRR   MNIKRLMD+GCYRG RHRRGLP+RGQRT TNARTRK   K   + 
Sbjct: 61  AQ-FTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKAAQSL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978]
 gi|169632372|ref|YP_001706108.1| 30S ribosomal protein S13 [Acinetobacter baumannii SDF]
 gi|169794616|ref|YP_001712409.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE]
 gi|184159576|ref|YP_001847915.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU]
 gi|213158813|ref|YP_002320811.1| ribosomal protein S13 [Acinetobacter baumannii AB0057]
 gi|215482205|ref|YP_002324387.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii
           AB307-0294]
 gi|239503212|ref|ZP_04662522.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB900]
 gi|260557049|ref|ZP_05829266.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606]
 gi|262373499|ref|ZP_06066777.1| 30S ribosomal protein S13 [Acinetobacter junii SH205]
 gi|294839725|ref|ZP_06784408.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013113]
 gi|294842675|ref|ZP_06787358.1| 30S ribosomal protein S13 [Acinetobacter sp. 6014059]
 gi|294860403|ref|ZP_06798172.1| 30S ribosomal protein S13 [Acinetobacter sp. 6013150]
 gi|301345032|ref|ZP_07225773.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB056]
 gi|301512037|ref|ZP_07237274.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB058]
 gi|301595206|ref|ZP_07240214.1| 30S ribosomal protein S13 [Acinetobacter baumannii AB059]
 gi|158706208|sp|A3M962|RS13_ACIBT RecName: Full=30S ribosomal protein S13
 gi|226712678|sp|B7GW24|RS13_ACIB3 RecName: Full=30S ribosomal protein S13
 gi|226712679|sp|B7IA17|RS13_ACIB5 RecName: Full=30S ribosomal protein S13
 gi|226712680|sp|B2HZ86|RS13_ACIBC RecName: Full=30S ribosomal protein S13
 gi|226712681|sp|B0VQU0|RS13_ACIBS RecName: Full=30S ribosomal protein S13
 gi|226712682|sp|B0V6U4|RS13_ACIBY RecName: Full=30S ribosomal protein S13
 gi|126388958|gb|ABO13456.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978]
 gi|169147543|emb|CAM85404.1| 30S ribosomal protein S13 [Acinetobacter baumannii AYE]
 gi|169151164|emb|CAO99836.1| 30S ribosomal protein S13 [Acinetobacter baumannii]
 gi|183211170|gb|ACC58568.1| 30S ribosomal protein S13 [Acinetobacter baumannii ACICU]
 gi|213057973|gb|ACJ42875.1| ribosomal protein S13 [Acinetobacter baumannii AB0057]
 gi|213988532|gb|ACJ58831.1| 30S ribosomal protein S13 (BS14) [Acinetobacter baumannii
           AB307-0294]
 gi|260409655|gb|EEX02956.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 19606]
 gi|262311252|gb|EEY92338.1| 30S ribosomal protein S13 [Acinetobacter junii SH205]
 gi|322509486|gb|ADX04940.1| 30S ribosomal protein S13 [Acinetobacter baumannii 1656-2]
 gi|323519507|gb|ADX93888.1| 30S ribosomal protein S13 [Acinetobacter baumannii TCDC-AB0715]
 gi|325123582|gb|ADY83105.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus PHEA-2]
          Length = 118

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|326793580|ref|YP_004311400.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1]
 gi|326544344|gb|ADZ89564.1| 30S ribosomal protein S13 [Marinomonas mediterranea MMB-1]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRSICAATGVAETAKIGSLSDEVLDQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  -ANYTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|116667422|pdb|2GY9|M Chain M, Structure Of The 30s Subunit Of A Pre-Translocational E.
           Coli Ribosome Obtained By Fitting Atomic Models For Rna
           And Protein Components Into Cryo-Em Map Emd-1056
 gi|116667474|pdb|2GYB|M Chain M, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
           Ribosome Complex Obtained By Fitting Atomic Models For
           Rna And Protein Components Into Cryo-Em Map Emd-1143
          Length = 115

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 115


>gi|88704354|ref|ZP_01102068.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71]
 gi|88701405|gb|EAQ98510.1| 30S ribosomal protein S13 [Congregibacter litoralis KT71]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G   ++ IC    +    RV  L E ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICEASGVEESARVGDLSEDQLDVLRNKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116


>gi|86132567|ref|ZP_01051160.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134]
 gi|85816809|gb|EAQ37994.1| 30S ribosomal protein S13 [Dokdonia donghaensis MED134]
          Length = 124

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   +Q+I     +  +++V    + E+ +IR A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRAQEILATANVSEDKKVSDWDDDEIGRIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR  V++NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GT-FTIEGELRSEVSLNIKRLMDIGCYRGIRHRVGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 [Bordetella avium 197N]
 gi|123515218|sp|Q2L248|RS13_BORA1 RecName: Full=30S ribosomal protein S13
 gi|115421157|emb|CAJ47641.1| 30S ribosomal protein S13 [Bordetella avium 197N]
          Length = 121

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  +     L  I G+G   ++ IC    +P  ++V  L ++E+ +IR+ +
Sbjct: 1   MARIAGINIPPQQHAEIGLTAIFGVGRTRARKICEAAGVPVTKKVKDLTDAELERIREHL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + VEGDLRR V ++IKRL+DLG YRG+RH+RGLPVRGQRT TNARTRK   +   + 
Sbjct: 61  G-VFTVEGDLRREVQLSIKRLIDLGTYRGMRHKRGLPVRGQRTRTNARTRKGPRRAAASL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|24371851|ref|NP_715893.1| 30S ribosomal protein S13 [Shewanella oneidensis MR-1]
 gi|113968566|ref|YP_732359.1| 30S ribosomal protein S13 [Shewanella sp. MR-4]
 gi|114045729|ref|YP_736279.1| 30S ribosomal protein S13 [Shewanella sp. MR-7]
 gi|117918679|ref|YP_867871.1| 30S ribosomal protein S13 [Shewanella sp. ANA-3]
 gi|32363324|sp|Q8EK48|RS13_SHEON RecName: Full=30S ribosomal protein S13
 gi|123030062|sp|Q0HNR5|RS13_SHESM RecName: Full=30S ribosomal protein S13
 gi|123131836|sp|Q0I083|RS13_SHESR RecName: Full=30S ribosomal protein S13
 gi|158706277|sp|A0KRP6|RS13_SHESA RecName: Full=30S ribosomal protein S13
 gi|24345668|gb|AAN53338.1|AE015474_1 ribosomal protein S13 [Shewanella oneidensis MR-1]
 gi|113883250|gb|ABI37302.1| SSU ribosomal protein S13P [Shewanella sp. MR-4]
 gi|113887171|gb|ABI41222.1| SSU ribosomal protein S13P [Shewanella sp. MR-7]
 gi|117611011|gb|ABK46465.1| SSU ribosomal protein S13P [Shewanella sp. ANA-3]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|312130525|ref|YP_003997865.1| ssu ribosomal protein s13p [Leadbetterella byssophila DSM 17132]
 gi|311907071|gb|ADQ17512.1| SSU ribosomal protein S13P [Leadbetterella byssophila DSM 17132]
          Length = 124

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/120 (45%), Positives = 81/120 (67%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+GV+IP  KR   +L YI+GIG  +++ I ++  +  +++  +  + E   IR  I  
Sbjct: 2   RISGVDIPDKKRGEISLTYIYGIGRSTAKHILSQANVSVDKKAGEWSDDEANAIRAIISN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +++VEG LR  V ++IKRLMD+GCYRGLRHR+GLP+RGQ+T  N+RTRK   K    +K+
Sbjct: 62  EFKVEGALRSEVQLSIKRLMDIGCYRGLRHRKGLPLRGQKTKNNSRTRKGKRKTIANKKK 121


>gi|254516932|ref|ZP_05128990.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3]
 gi|219674437|gb|EED30805.1| ribosomal protein S13p/S18e [gamma proteobacterium NOR5-3]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G   ++ IC    +    RV  L E ++  +R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRTQAKRICAASGVEESARVGDLSEDQLDVLRNKV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +   VEGDLRR V+MNIKRLMDLGC RGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GE-LTVEGDLRREVSMNIKRLMDLGCNRGLRHRRNLPLRGQRTKTNARTRKGPRKPI 116


>gi|189183973|ref|YP_001937758.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda]
 gi|226712771|sp|B3CT27|RS13_ORITI RecName: Full=30S ribosomal protein S13
 gi|189180744|dbj|BAG40524.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Ikeda]
          Length = 125

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+ VN+P  KRV+  L YI+GIG  ++Q IC ++ +   ++V  L   E++ +R  I
Sbjct: 1   MARISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR + +NIK+  D+ CY GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|157377429|ref|YP_001476029.1| 30S ribosomal protein S13 [Shewanella sediminis HAW-EB3]
 gi|189044297|sp|A8G1C8|RS13_SHESH RecName: Full=30S ribosomal protein S13
 gi|157319803|gb|ABV38901.1| ribosomal protein S13 [Shewanella sediminis HAW-EB3]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDQKHTVIALTGIFGIGRTRARAICATTSIAEDAKIKELSEAQIDTLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|305665114|ref|YP_003861401.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170]
 gi|88709866|gb|EAR02098.1| 30S ribosomal protein S13 [Maribacter sp. HTCC2170]
          Length = 124

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   S++I +K  +  + +V    + E+ +IR+A+
Sbjct: 1   MARIAGIDIPKQKRGVIALTYIFGIGKSRSKEILDKAQVSEDTKVSDWNDDEIGRIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  -ALYTIEGELRSETQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163938143|ref|YP_001643027.1| 30S ribosomal protein S13 [Bacillus weihenstephanensis KBAB4]
 gi|229053981|ref|ZP_04195415.1| 30S ribosomal protein S13 [Bacillus cereus AH603]
 gi|226712695|sp|A9VPA2|RS13_BACWK RecName: Full=30S ribosomal protein S13
 gi|163860340|gb|ABY41399.1| ribosomal protein S13 [Bacillus weihenstephanensis KBAB4]
 gi|228721399|gb|EEL72920.1| 30S ribosomal protein S13 [Bacillus cereus AH603]
          Length = 121

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRVV +L Y+ GIG  +++ I  +  I  E RV  L E E+ +IR  I
Sbjct: 1   MARIAGVDIPRDKRVVISLTYVFGIGRTTAEKIITEAGISSETRVRDLSEDELGRIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++  +VEGDLRR V++NIKRLM++G YRGLRHRRGLPVRGQ +  NARTRK   +    +
Sbjct: 61  DR-IKVEGDLRREVSLNIKRLMEIGSYRGLRHRRGLPVRGQNSKNNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|110833280|ref|YP_692139.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2]
 gi|123050727|sp|Q0VSI1|RS13_ALCBS RecName: Full=30S ribosomal protein S13
 gi|110646391|emb|CAL15867.1| 30S ribosomal protein S13 [Alcanivorax borkumensis SK2]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   ++ IC    I    +V +L   ++  IR  +
Sbjct: 1   MARIAGVNIPENKHTVISLTYIFGIGRTRAESICATTGIEQTAKVRELTGEQLDAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|294142911|ref|YP_003558889.1| 30S ribosomal protein S13 [Shewanella violacea DSS12]
 gi|22257036|sp|Q9S0R1|RS13_SHEVD RecName: Full=30S ribosomal protein S13
 gi|5913929|dbj|BAA84522.1| ribosomal protein S13 [Shewanella violacea]
 gi|293329380|dbj|BAJ04111.1| ribosomal protein S13 [Shewanella violacea DSS12]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+A+
Sbjct: 1   MARIAGINIPDQKHTVIALTGIFGIGRTRARAICAATSIAEDAKIKELSEAQIDILREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|253581363|ref|ZP_04858589.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725]
 gi|251836727|gb|EES65261.1| ribosomal protein S13 [Fusobacterium varium ATCC 27725]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR  I
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E   +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|190571567|ref|YP_001975925.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018969|ref|ZP_03334776.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|226712803|sp|B3CN47|RS13_WOLPP RecName: Full=30S ribosomal protein S13
 gi|190357839|emb|CAQ55295.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995078|gb|EEB55719.1| ribosomal protein S13 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 122

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K V  AL YIHGIG  ++  IC    I   +RV +L + ++ +I   I
Sbjct: 1   MARIAGINVPVKKCVPFALTYIHGIGITTANIICRSCKIDERKRVLELQDEDIEKISSFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q Y +EG+LR+ VAM+IK LM++GCYRGLRHR+GLPVRGQRTHTNA+TRK   K  +A 
Sbjct: 61  RQKYVIEGELRKKVAMDIKSLMEIGCYRGLRHRKGLPVRGQRTHTNAKTRKGRSKLPIAG 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|90416838|ref|ZP_01224767.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207]
 gi|90331185|gb|EAS46429.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2207]
          Length = 118

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y+ GIG  +++ IC  + I  + ++  L E+++  +R A+
Sbjct: 1   MARIAGVNIPDNKHAVISLTYVFGIGRPTARKICADVGIAEDTKIAALDEAQLDLLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             + +VEGDLRR  +MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   +  
Sbjct: 61  GTN-EVEGDLRRENSMNIKRLMDLGCYRGLRHRRNLPVRGQRTKTNARTRKGPRRPI 116


>gi|87122793|ref|ZP_01078666.1| 30S ribosomal protein S13 [Marinomonas sp. MED121]
 gi|86161958|gb|EAQ63250.1| 30S ribosomal protein S13 [Marinomonas sp. MED121]
          Length = 118

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + Q+R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICASTGVAESAKIGSLSDEVLDQLRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++M+IKRLMD+GC+RG+RHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRRELSMSIKRLMDMGCHRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|189347679|ref|YP_001944208.1| 30S ribosomal protein S13 [Chlorobium limicola DSM 245]
 gi|226712711|sp|B3EGW6|RS13_CHLL2 RecName: Full=30S ribosomal protein S13
 gi|189341826|gb|ACD91229.1| ribosomal protein S13 [Chlorobium limicola DSM 245]
          Length = 125

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/120 (53%), Positives = 82/120 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I PER++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRTSAENILQRAGIAPERKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           DY+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K    +K+
Sbjct: 62  DYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKTVAGKKK 121


>gi|32034697|ref|ZP_00134835.1| COG0099: Ribosomal protein S13 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209245|ref|YP_001054470.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae L20]
 gi|158706211|sp|A3N379|RS13_ACTP2 RecName: Full=30S ribosomal protein S13
 gi|126098037|gb|ABN74865.1| 30S ribosomal protein S13 [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 118

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC    I  + ++ +L E ++ ++R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAVTGIAEDVKIRELSEEQIEKLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V ++IKRL+DLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|193214823|ref|YP_001996022.1| 30S ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
 gi|226712715|sp|B3QYE7|RS13_CHLT3 RecName: Full=30S ribosomal protein S13
 gi|193088300|gb|ACF13575.1| ribosomal protein S13 [Chloroherpeton thalassium ATCC 35110]
          Length = 125

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/115 (51%), Positives = 79/115 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGV++PR K VV  L Y++GIG  +++ I  K  +P +++V ++ + E  +IR  +  
Sbjct: 2   RIAGVDLPRNKHVVIGLTYVYGIGRTTAKKILAKAGVPEDKKVSEVTDDEANEIRTIVTN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +Y+VEG  R    + IKRLMD+GCYRGLRHRRGLP RGQRT TNARTRK   K  
Sbjct: 62  EYKVEGQARSEQQLAIKRLMDIGCYRGLRHRRGLPARGQRTRTNARTRKGKRKTV 116


>gi|34541517|ref|NP_905996.1| 30S ribosomal protein S13 [Porphyromonas gingivalis W83]
 gi|188995708|ref|YP_001929960.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277]
 gi|81416929|sp|Q7MTN7|RS13_PORGI RecName: Full=30S ribosomal protein S13
 gi|226712775|sp|B2RLW8|RS13_PORG3 RecName: Full=30S ribosomal protein S13
 gi|34397834|gb|AAQ66895.1| ribosomal protein S13 [Porphyromonas gingivalis W83]
 gi|188595388|dbj|BAG34363.1| 30S ribosomal protein S13 [Porphyromonas gingivalis ATCC 33277]
          Length = 126

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR   AL YI+GIG  S+  I +K  +  + +V    + +   IR  
Sbjct: 1   MAIRIVGVDLPQNKRGFIALTYIYGIGRSSAITILDKAGVDRDIKVKDWSDDQAAAIRDV 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I   Y+VEGDLR  V +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK 
Sbjct: 61  IGAGYKVEGDLRSEVQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKG 113


>gi|257470857|ref|ZP_05634947.1| 30S ribosomal protein S13 [Fusobacterium ulcerans ATCC 49185]
 gi|317065060|ref|ZP_07929545.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185]
 gi|313690736|gb|EFS27571.1| SSU ribosomal protein S13P [Fusobacterium ulcerans ATCC 49185]
          Length = 118

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG  +SQ +  +  +  + RV  L E EV +IR  +
Sbjct: 1   MARIAGVDIPRNKRVEIALTYIYGIGKPTSQRVLTEAGVNFDTRVKDLTEEEVNKIRAIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E   +VEGDLR+ V ++IKRLMD+ CYRGLRH+  LPVRGQ + TNART K   K  
Sbjct: 61  ET-VKVEGDLRKDVRLSIKRLMDIKCYRGLRHKMNLPVRGQSSKTNARTVKGPKKPI 116


>gi|15674052|ref|NP_268227.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403]
 gi|116513029|ref|YP_811936.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris SK11]
 gi|125625117|ref|YP_001033600.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|281492734|ref|YP_003354714.1| 50S ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147]
 gi|61236823|sp|P0A4A9|RS13_LACLA RecName: Full=30S ribosomal protein S13
 gi|122939923|sp|Q02W49|RS13_LACLS RecName: Full=30S ribosomal protein S13
 gi|158706241|sp|A2RNM9|RS13_LACLM RecName: Full=30S ribosomal protein S13
 gi|12725122|gb|AAK06168.1|AE006436_17 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis Il1403]
 gi|116108683|gb|ABJ73823.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. cremoris
           SK11]
 gi|124493925|emb|CAL98920.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|281376386|gb|ADA65872.1| SSU ribosomal protein S13P [Lactococcus lactis subsp. lactis KF147]
 gi|300071925|gb|ADJ61325.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. cremoris
           NZ9000]
 gi|326407606|gb|ADZ64677.1| 30S ribosomal protein S13 [Lactococcus lactis subsp. lactis CV56]
          Length = 121

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR AGV+IP  KR+V +L Y+ G+G ++S+ +     +  + R   L   +   IR+ +
Sbjct: 1   MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSDQEDAIRREL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   ++EGDLRR V++NIKRLM++G YRG+RHRRGLP RGQ T  NARTRK   K    +
Sbjct: 61  D-GLKLEGDLRREVSLNIKRLMEIGSYRGMRHRRGLPTRGQNTKNNARTRKGPAKSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|42526301|ref|NP_971399.1| 30S ribosomal protein S13 [Treponema denticola ATCC 35405]
 gi|81570369|sp|Q73PL0|RS13_TREDE RecName: Full=30S ribosomal protein S13
 gi|41816413|gb|AAS11280.1| ribosomal protein S13 [Treponema denticola ATCC 35405]
 gi|325473244|gb|EGC76439.1| 30S ribosomal protein S13 [Treponema denticola F0402]
          Length = 121

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P  K V  +L YI+GI   S+  IC    + P ++++ L E+E+  IR+ I
Sbjct: 1   MARIAGVDLP-NKHVNVSLTYIYGISTSSANKICEATKVDPMKKMNDLDEAELAAIREVI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           +++Y+VEG LR  VA+NIKRL D+GCYRG RHR+GLPVRGQRT TNARTR
Sbjct: 60  DREYKVEGRLRTEVALNIKRLQDIGCYRGQRHRKGLPVRGQRTRTNARTR 109


>gi|226953893|ref|ZP_03824357.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244]
 gi|294651612|ref|ZP_06728916.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194]
 gi|226835376|gb|EEH67759.1| 30S ribosomal protein S13 [Acinetobacter sp. ATCC 27244]
 gi|292822461|gb|EFF81360.1| 30S ribosomal protein S13 [Acinetobacter haemolyticus ATCC 19194]
          Length = 118

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGIAGTTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|32477616|ref|NP_870610.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
 gi|81658839|sp|Q7UIC7|RS13_RHOBA RecName: Full=30S ribosomal protein S13
 gi|32448170|emb|CAD77687.1| 30S ribosomal protein S13 [Rhodopirellula baltica SH 1]
          Length = 127

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 77/121 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K++  +L Y++G+G   ++++C KL I P      + + +V +I   +
Sbjct: 1   MPRLMGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY VEG LRR V  NI R+ ++  YRG+RHR  LPVRGQRT TNARTRK   K    +
Sbjct: 61  ERDYLVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRKGPRKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|15892907|ref|NP_360621.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7]
 gi|22257033|sp|Q92GY8|RS13_RICCN RecName: Full=30S ribosomal protein S13
 gi|15620098|gb|AAL03522.1| 30S ribosomal protein S13 [Rickettsia conorii str. Malish 7]
          Length = 125

 Score =  163 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGPAMAAEICNKAKISKDKKVKELTDQELIGLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|291277245|ref|YP_003517017.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
 gi|290964439|emb|CBG40289.1| 30S ribosomal protein S13 [Helicobacter mustelae 12198]
          Length = 120

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 70/120 (58%), Positives = 87/120 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL +I+GIG K S+DI N + I  ++RVH L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTHIYGIGLKISRDILNAVNISFDKRVHDLSEDEVSAIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QESYMVEGDLRKKVQMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|119358167|ref|YP_912811.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides DSM 266]
 gi|158706222|sp|A1BJ10|RS13_CHLPD RecName: Full=30S ribosomal protein S13
 gi|119355516|gb|ABL66387.1| SSU ribosomal protein S13P [Chlorobium phaeobacteroides DSM 266]
          Length = 125

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/120 (52%), Positives = 82/120 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S++ I  +  I PER++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTSAKSILQRAGIAPERKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           DY+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K    +K+
Sbjct: 62  DYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKTVAGKKK 121


>gi|225011669|ref|ZP_03702107.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A]
 gi|225004172|gb|EEG42144.1| ribosomal protein S13 [Flavobacteria bacterium MS024-2A]
          Length = 124

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IP+ KR V AL YI GIG   +Q I     +   ++V +  + E  +IR+ +
Sbjct: 1   MARISGVDIPKQKRGVIALTYIFGIGKSRAQSILETAKVDENKKVSEWSDDETGRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              +++EG+LR  V +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GS-FKIEGELRSEVQLNIKRLMDIGCYRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|85713164|ref|ZP_01044196.1| Ribosomal protein S13 [Idiomarina baltica OS145]
 gi|85693034|gb|EAQ31000.1| Ribosomal protein S13 [Idiomarina baltica OS145]
          Length = 118

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+GIG   S  IC    I  + ++  L E ++  +R+A+
Sbjct: 1   MARIAGINVPDNKHAVIALTAIYGIGRTRSSAICEAAGIAEDTQIGTLSEEKLDVLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|56460994|ref|YP_156275.1| 30S ribosomal protein S13 [Idiomarina loihiensis L2TR]
 gi|81362955|sp|Q5QXV5|RS13_IDILO RecName: Full=30S ribosomal protein S13
 gi|56180004|gb|AAV82726.1| Ribosomal protein S13 [Idiomarina loihiensis L2TR]
          Length = 118

 Score =  163 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+G+G   SQ I     I  + ++  L E ++  +R A+
Sbjct: 1   MARIAGINVPDNKHAVIALTAIYGVGRTRSQQILAATGIAEDTKIGSLSEDKLDALRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  SK-FAVEGDLRREVSMNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|254429054|ref|ZP_05042761.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881]
 gi|196195223|gb|EDX90182.1| ribosomal protein S13p/S18e [Alcanivorax sp. DG881]
          Length = 118

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   +  IC    I    +V +L   ++  IR  +
Sbjct: 1   MARIAGVNIPENKHTVISLTYIFGIGRTRAASICVATGIEQTAKVRELTGEQLDAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +  EGDLRR + MNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  AK-FSTEGDLRREINMNIKRLMDLGCYRGIRHRRGLPLRGQRTKTNARTRKGPRKPI 116


>gi|119946249|ref|YP_943929.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37]
 gi|119947104|ref|YP_944784.1| 30S ribosomal protein S13 [Psychromonas ingrahamii 37]
 gi|158706266|sp|A1SXW5|RS13_PSYIN RecName: Full=30S ribosomal protein S13
 gi|119864853|gb|ABM04330.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37]
 gi|119865708|gb|ABM05185.1| SSU ribosomal protein S13P [Psychromonas ingrahamii 37]
          Length = 118

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I GIG   SQ IC    I    ++  L E+++  +R  +
Sbjct: 1   MARIAGINVPDHKHAVIALTAIFGIGKTRSQIICAASGIAESTKLKDLDETQIEALRTEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
              + VEGDLRR V+MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK   K  
Sbjct: 61  AT-FTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRKGPRKAI 116


>gi|254455733|ref|ZP_05069162.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082735|gb|EDZ60161.1| ribosomal protein S13p/S18e [Candidatus Pelagibacter sp. HTCC7211]
          Length = 127

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 66/121 (54%), Positives = 89/121 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP+ K V   L YI+GIG K S  IC+ L IP  +R+++L + E+++IR+ I
Sbjct: 1   MARIAGINIPQNKLVHIGLTYIYGIGDKFSNQICSSLEIPRAKRINELTDDEILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q+++VEGDLRR  +++IKRL+DL CYRG RHR+ LPVRGQRT  NARTRK        +
Sbjct: 61  DQNFKVEGDLRRDYSLSIKRLIDLACYRGTRHRKKLPVRGQRTRCNARTRKGKAIAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|119029440|gb|ABL59937.1| 30S ribosomal protein S13 [uncultured bacterium]
          Length = 119

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GVNIP  K V   L  I+GIG  S+  IC    + P+ +V  L E E+ +IR  I
Sbjct: 1   MARIVGVNIPVKKHVEIGLTSIYGIGRVSASKICQVAGVNPQTKVGSLTEEELDKIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR VAMN+KRL+++G YRGLRHRRGLPVRGQRT TNARTRK  G+    +
Sbjct: 61  NK-YTTEGDLRREVAMNVKRLIEIGAYRGLRHRRGLPVRGQRTKTNARTRKGKGRRIAVK 119


>gi|302036690|ref|YP_003797012.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii]
 gi|300604754|emb|CBK41086.1| 30S ribosomal protein S13 [Candidatus Nitrospira defluvii]
          Length = 129

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 90/121 (74%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+   L Y++GIG  ++Q I  K  +    RV  + E ++++IR+ I
Sbjct: 1   MARIAGVDLPKDKRIDIGLTYVYGIGRVAAQVILKKAGVDGSIRVKDVSEDKIVKIREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY+VEGDLR+ V+MNIKRL+D G +RGLRHR+GLPVRGQRT TNARTRK   + GV  
Sbjct: 61  ERDYRVEGDLRKEVSMNIKRLVDTGTFRGLRHRKGLPVRGQRTKTNARTRKG-RRSGVGS 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|120597011|ref|YP_961585.1| 30S ribosomal protein S13 [Shewanella sp. W3-18-1]
 gi|146294819|ref|YP_001185243.1| 30S ribosomal protein S13 [Shewanella putrefaciens CN-32]
 gi|158706278|sp|A1RED6|RS13_SHESW RecName: Full=30S ribosomal protein S13
 gi|166231925|sp|A4YBW1|RS13_SHEPC RecName: Full=30S ribosomal protein S13
 gi|120557104|gb|ABM23031.1| SSU ribosomal protein S13P [Shewanella sp. W3-18-1]
 gi|145566509|gb|ABP77444.1| SSU ribosomal protein S13P [Shewanella putrefaciens CN-32]
 gi|319424602|gb|ADV52676.1| 30S ribosomal protein S13 [Shewanella putrefaciens 200]
          Length = 118

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDTLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|254785101|ref|YP_003072529.1| 30S ribosomal protein S13 [Teredinibacter turnerae T7901]
 gi|259494692|sp|C5BQ83|RS13_TERTT RecName: Full=30S ribosomal protein S13
 gi|237684688|gb|ACR11952.1| ribosomal protein S13 [Teredinibacter turnerae T7901]
          Length = 118

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y+ GIG  +++ IC    +    ++  L ++++ +IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVFGIGKTTAKQICAATGVAESTKISALDDAKMDEIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQR+ TNARTRK   K  
Sbjct: 61  AK-HTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRSKTNARTRKGPRKPI 116


>gi|157826041|ref|YP_001493761.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford]
 gi|166231919|sp|A8GPC8|RS13_RICAH RecName: Full=30S ribosomal protein S13
 gi|157799999|gb|ABV75253.1| 30S ribosomal protein S13 [Rickettsia akari str. Hartford]
          Length = 125

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L Y++G+G   + +ICNK  I  +++  +L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYVYGLGPAMAAEICNKAKISKDKKAKELTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|78776525|ref|YP_392840.1| 30S ribosomal protein S13 [Sulfurimonas denitrificans DSM 1251]
 gi|91207632|sp|Q30TS6|RS13_SULDN RecName: Full=30S ribosomal protein S13
 gi|78497065|gb|ABB43605.1| SSU ribosomal protein S13P [Sulfurimonas denitrificans DSM 1251]
          Length = 120

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 63/119 (52%), Positives = 83/119 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR+   L Y++GIG  +S+ I +   I   +RV++L E ++  I + I
Sbjct: 1   MARISGVDLPKKKRIEYGLTYVYGIGLHASRKILDATGIDYNKRVYELNEDDIAAITKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
              + VEGDLR+ VAM+IK LMDLG YRGLRHRRGLP RGQ+T TNARTRK   K   A
Sbjct: 61  RASHVVEGDLRKQVAMDIKALMDLGSYRGLRHRRGLPCRGQKTKTNARTRKGKRKTVGA 119


>gi|298531063|ref|ZP_07018464.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509086|gb|EFI32991.1| 30S ribosomal protein S13 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 122

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 61/113 (53%), Positives = 81/113 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ K++  +L YI+GIG  ++  I +   +   R+  +L   EV  IR  +
Sbjct: 1   MARIAGVDLPKRKKIGISLTYIYGIGRTTALKILDASGVDWTRKTEELTSDEVNVIRGEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           E +Y+VEGDLRR  + +IKRLMD+GCYRGLRHRR +PVRGQRTHTNAR RK  
Sbjct: 61  ENNYKVEGDLRREKSADIKRLMDIGCYRGLRHRRSMPVRGQRTHTNARIRKGP 113


>gi|212550429|ref|YP_002308746.1| 30S ribosomal protein S13 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|226712690|sp|B6YQ63|RS13_AZOPC RecName: Full=30S ribosomal protein S13
 gi|212548667|dbj|BAG83335.1| 30S ribosomal protein S13 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 126

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 79/121 (65%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI GV++P+ KR   AL YI+GIG   S  I  +  I  + R+    + +V  +R+ I 
Sbjct: 3   VRILGVDLPQNKRGEIALTYIYGIGCGLSSKILTEAGIDRDTRIKDWTDVQVAAVREIIS 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           ++++VEGDLR  + +NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK   K    +K
Sbjct: 63  RNFKVEGDLRSEIQLNIKRLMDIGCYRGIRHRIGLPLRGQSTKNNARTRKGKRKTVANKK 122

Query: 122 R 122
           R
Sbjct: 123 R 123


>gi|324999249|ref|ZP_08120361.1| 30S ribosomal protein S13 [Pseudonocardia sp. P1]
          Length = 126

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/117 (50%), Positives = 80/117 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI G+G   S++I    AI  + R   L + +V ++R  I
Sbjct: 1   MARVAGVDLPREKRMEIALTYIFGVGRARSKEILEATAISADLRSKDLTDEDVTKLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E+  QVEGDLRR +  +I+R +++G Y+G+RHRRGLPVRGQRT TNAR RK   K  
Sbjct: 61  EEHLQVEGDLRREIQADIRRKIEIGSYQGIRHRRGLPVRGQRTKTNARGRKGPKKTV 117


>gi|78186092|ref|YP_374135.1| 30S ribosomal protein S13 [Chlorobium luteolum DSM 273]
 gi|91207712|sp|Q3B6D9|RS13_PELLD RecName: Full=30S ribosomal protein S13
 gi|78165994|gb|ABB23092.1| SSU ribosomal protein S13P [Chlorobium luteolum DSM 273]
          Length = 125

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 59/120 (49%), Positives = 81/120 (67%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  +++ I  +  I P+R++  L ++E   IR+ + +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGNTTAKTILKRAGIAPDRKISDLNDAEAHAIRELVAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +Y+VEG  R    + IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK   K    +K+
Sbjct: 62  EYKVEGQARGEQQLAIKRLMDIGCYRGLRHRRSLPVRGQNTQTNARTRKGKRKTVAGKKK 121


>gi|167957549|ref|ZP_02544623.1| 30S ribosomal protein S13 [candidate division TM7 single-cell
           isolate TM7c]
          Length = 128

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/112 (57%), Positives = 77/112 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV IP  K+V  +L YI+GIG K ++DI     I P  RV  L E+E  +IR  I
Sbjct: 1   MARISGVVIPSEKQVQISLTYIYGIGPKYARDILAAAKIEPTTRVKDLTEAEEQKIRDII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + +Y  EGDL+R V  NIKRL D+  YRGLRH+ GLPVRGQRT TNARTRK 
Sbjct: 61  DNNYTTEGDLQRLVTNNIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRKG 112


>gi|260549818|ref|ZP_05824034.1| ribosomal protein S13 [Acinetobacter sp. RUH2624]
 gi|293610846|ref|ZP_06693146.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024]
 gi|260407068|gb|EEX00545.1| ribosomal protein S13 [Acinetobacter sp. RUH2624]
 gi|292827190|gb|EFF85555.1| 30S ribosomal protein S13 [Acinetobacter sp. SH024]
          Length = 118

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|114561358|ref|YP_748871.1| 30S ribosomal protein S13 [Shewanella frigidimarina NCIMB 400]
 gi|122301096|sp|Q089N2|RS13_SHEFN RecName: Full=30S ribosomal protein S13
 gi|114332651|gb|ABI70033.1| SSU ribosomal protein S13P [Shewanella frigidimarina NCIMB 400]
          Length = 118

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   +I  + ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTSIAEDAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|229917333|ref|YP_002885979.1| ribosomal protein S13 [Exiguobacterium sp. AT1b]
 gi|259494678|sp|C4KZM1|RS13_EXISA RecName: Full=30S ribosomal protein S13
 gi|229468762|gb|ACQ70534.1| ribosomal protein S13 [Exiguobacterium sp. AT1b]
          Length = 121

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+V +L YI+GIG   +Q+I     +  E R   L E E+ +IR+AI
Sbjct: 1   MARIAGVDIPREKRIVISLTYIYGIGKTKAQEILKAANVSEETRTRDLTEDELNRIREAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   +VEGDLRR V++NIKRL+++G YRG+RHRR LPVRGQ T  N+RTRK   +    +
Sbjct: 61  D-GIKVEGDLRREVSLNIKRLIEIGAYRGIRHRRSLPVRGQNTKNNSRTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|39938711|ref|NP_950477.1| 30S ribosomal protein S13 [Onion yellows phytoplasma OY-M]
 gi|81402506|sp|Q6YQZ7|RS13_ONYPE RecName: Full=30S ribosomal protein S13
 gi|39721820|dbj|BAD04310.1| ribosomal protein S13 [Onion yellows phytoplasma OY-M]
          Length = 121

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K S  I N+L I    RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELNIDQNIRVKNLTEQQLSALRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K   K    +
Sbjct: 61  TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|307297370|ref|ZP_07577176.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916630|gb|EFN47012.1| 30S ribosomal protein S13 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 122

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/121 (47%), Positives = 78/121 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K+   AL YI+GIG+  S +I +   I   +R   L + EV +I + I
Sbjct: 1   MARILGVELPNNKKTFVALTYIYGIGYTRSNEILSGTEIDGNKRAKDLTDEEVSKIAKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y+VEG+LR  V  +IKRL+++G YRG RHR GLPVRGQ+TH+N RTRK      + +
Sbjct: 61  NEHYKVEGELRTEVDRSIKRLIEIGSYRGYRHRNGLPVRGQKTHSNGRTRKGSRASKIRK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|224510714|pdb|3FIH|M Chain M, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
           Consists Of The 30s Subunit, Trnas And The Ternary
           Complex.
 gi|294662229|pdb|2WWL|M Chain M, E.Coli 70s Ribosome Stalled During Translation Of Tnac
           Leader Peptide. This File Contains The 30s, The P-Site
           Trna And The Tnac Leader Peptide (Part 1 Of 2).
 gi|308387998|pdb|3OFP|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Erythromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome.
 gi|309320056|pdb|3OFB|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Chloramphenicol. This File Contains The 30s Subunit Of
           The Second 70s Ribosome.
 gi|309320160|pdb|3OFY|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Clindamycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome
 gi|315113645|pdb|3OAR|M Chain M, Crystal Structure Of The E. Coli Ribosome Bound To
           Telithromycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome
          Length = 113

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRK 113


>gi|152998249|ref|YP_001343084.1| 30S ribosomal protein S13 [Marinomonas sp. MWYL1]
 gi|189044280|sp|A6W370|RS13_MARMS RecName: Full=30S ribosomal protein S13
 gi|150839173|gb|ABR73149.1| ribosomal protein S13 [Marinomonas sp. MWYL1]
          Length = 118

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI GIG   S+ IC    +    ++  L +  + ++R  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGIGRTRSRAICAATGVAETAKIGSLSDDVLDELRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+M+IKRLMDLGC RG+RHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMSIKRLMDLGCNRGIRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|257067036|ref|YP_003153292.1| 30S ribosomal protein S13 [Anaerococcus prevotii DSM 20548]
 gi|256798916|gb|ACV29571.1| ribosomal protein S13 [Anaerococcus prevotii DSM 20548]
          Length = 114

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             +Y +EGDLRR V+MNI+ L ++G YRGLRH+  LPVRGQ T  NARTRK 
Sbjct: 61  -NNYHIEGDLRREVSMNIRSLREIGSYRGLRHKNNLPVRGQNTKNNARTRKG 111


>gi|256820005|ref|YP_003141284.1| 30S ribosomal protein S13 [Capnocytophaga ochracea DSM 7271]
 gi|256581588|gb|ACU92723.1| ribosomal protein S13 [Capnocytophaga ochracea DSM 7271]
          Length = 124

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDEEITRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|289209307|ref|YP_003461373.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix]
 gi|288944938|gb|ADC72637.1| 30S ribosomal protein S13 [Thioalkalivibrio sp. K90mix]
          Length = 118

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AG+NIP  K  V AL  I+GIG   ++ IC    + PE +V  L ++EV  +R  I
Sbjct: 1   MARVAGINIPDQKHTVVALTAIYGIGPTRARQICEAAGVRPEIKVRDLTDAEVDALRAQI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           ++   VEGDLRR ++MNIKRLMDLGCYRG+RHRRGLP+RGQ+T TNARTRK   +  
Sbjct: 61  DR-IPVEGDLRREISMNIKRLMDLGCYRGVRHRRGLPLRGQQTQTNARTRKGPRRPI 116


>gi|33357890|pdb|1P6G|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
           State Of E. Coli 70s Ribosome
 gi|33357967|pdb|1P87|M Chain M, Real Space Refined Coordinates Of The 30s Subunit Fitted
           Into The Low Resolution Cryo-Em Map Of The
           Initiation-Like State Of E. Coli 70s Ribosome
 gi|83754051|pdb|2AVY|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|83754107|pdb|2AW7|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli At 3.5 A Resolution. This File Contains
           The 30s Subunit Of The Second 70s Ribosome. The Entire
           Crystal Structure Contains Two 70s Ribosomes And Is
           Described In Remark 400.
 gi|118138065|pdb|2I2P|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|118138136|pdb|2I2U|M Chain M, Crystal Structure Of Ribosome With Messenger Rna And The
           Anticodon Stem-Loop Of P-Site Trna. This File Contains
           The 30s Subunit Of One 70s Ribosome. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|157836035|pdb|2QOU|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The First 70s Ribosome,
           With Spectinomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|157836092|pdb|2QOW|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin. This
           File Contains The 30s Subunit Of The Second 70s
           Ribosome, With Spectinomycin Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes.
 gi|157836139|pdb|2QOY|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           First 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|157836196|pdb|2QP0|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Spectinomycin And
           Neomycin. This File Contains The 30s Subunit Of The
           Second 70s Ribosome, With Spectinomycin And Neomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes.
 gi|158429710|pdb|2QAL|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Neomycin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429762|pdb|2QAN|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Neomycin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Neomycin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429820|pdb|2QB9|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Gentamicin Bound. The Entire Crystal Structure Contains
           Two 70s Ribosomes And Is Described In Remark 400.
 gi|158429872|pdb|2QBB|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Gentamicin Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429924|pdb|2QBD|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           First 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158429976|pdb|2QBF|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 30s Subunit Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes And Is Described In Remark
           400.
 gi|158430030|pdb|2QBH|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The First 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430083|pdb|2QBJ|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 30s
           Subunit Of The Second 70s Ribosome, With Gentamicin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431383|pdb|2Z4K|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The First 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431436|pdb|2Z4M|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           30s Subunit Of The Second 70s Ribosome, With Paromomycin
           Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|168988800|pdb|2VHO|M Chain M, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 3 Of 4)
 gi|168988821|pdb|2VHP|M Chain M, Structure Of Pdf Binding Helix In Complex With The
           Ribosome (Part 4 Of 4)
 gi|197107290|pdb|3DF1|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The First 70s Ribosome, With
           Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|197107342|pdb|3DF3|M Chain M, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Hygromycin B. This File
           Contains The 30s Subunit Of The Second 70s Ribosome,
           With Hygromycin B Bound. The Entire Crystal Structure
           Contains Two 70s Ribosomes.
 gi|329666004|pdb|3J00|M Chain M, Structure Of The Ribosome-Secye Complex In The Membrane
           Environment
          Length = 117

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 1   ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 115


>gi|167752409|ref|ZP_02424536.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216]
 gi|167660650|gb|EDS04780.1| hypothetical protein ALIPUT_00653 [Alistipes putredinis DSM 17216]
          Length = 126

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV++P+ KR    L YI+GIG  +++ I ++  I  + +V    + +V  IR  I
Sbjct: 1   MARIVGVDLPKNKRGEIGLTYIYGIGRSTARKILDEAGISYDLKVQDWSDEQVGAIRSKI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +   +VEG+ R  V +NIKRLMD+GCYRG+RHR GLPVRGQ T  NARTRK 
Sbjct: 61  ADMGIKVEGECRSVVQLNIKRLMDIGCYRGIRHRLGLPVRGQSTKNNARTRKG 113


>gi|134103234|ref|YP_001108895.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
 gi|291007974|ref|ZP_06565947.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
 gi|158706274|sp|A4FPJ5|RS13_SACEN RecName: Full=30S ribosomal protein S13
 gi|133915857|emb|CAM05970.1| 30S ribosomal protein S13 [Saccharopolyspora erythraea NRRL 2338]
          Length = 125

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S++I     I  + R   L + ++ ++R+A+
Sbjct: 1   MARLAGVDLPREKRMEIALTYIYGIGRTRSKEILRATDISFDVRPKDLDDDQLAKLREAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           E +Y++EGDLRR V  +I+R +++GCY+GLRHRR LPV GQRT TNARTRK   K  
Sbjct: 61  E-NYRLEGDLRREVQADIRRKIEIGCYQGLRHRRHLPVHGQRTKTNARTRKGPKKTV 116


>gi|563203|gb|AAB17598.1| ribosomal protein S13 [Mycobacterium bovis]
 gi|1589487|prf||2211287D ribosomal protein S13
          Length = 123

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/114 (51%), Positives = 77/114 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MDRLVGVDLPRHKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK   
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPK 114


>gi|148284193|ref|YP_001248283.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong]
 gi|158706339|sp|A5CCJ1|RS13_ORITB RecName: Full=30S ribosomal protein S13
 gi|146739632|emb|CAM79421.1| 30S ribosomal protein S13 [Orientia tsutsugamushi str. Boryong]
          Length = 125

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+RI+ VN+P  KRV+  L YI+GIG  ++Q IC ++ +   ++V  L   E++ +R  I
Sbjct: 1   MSRISNVNVPTNKRVMIGLTYIYGIGRSTAQKICQEVQVSVNKKVKDLSNQELVALRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y+VEGDLRR + +NIK+  D+ CY GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ESKYKVEGDLRREINLNIKKKKDIRCYEGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254446003|ref|ZP_05059479.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
 gi|198260311|gb|EDY84619.1| ribosomal protein S13p/S18e [Verrucomicrobiae bacterium DG1235]
          Length = 123

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 78/123 (63%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L YI+GIG   S+ I  +  I P+ R   L E ++  I   I
Sbjct: 1   MPRILGVDIPANKKLEYSLRYIYGIGPTRSKTILAQTGIDPDMRAKNLDEEQINAIMAKI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           ++    VEGDLRR +  N+KRL  + CYRGLRHRRGLPVRGQRT TNARTRK   K   +
Sbjct: 61  QELQLVVEGDLRRELTSNMKRLQAINCYRGLRHRRGLPVRGQRTKTNARTRKGKLKTIGS 120

Query: 120 RKR 122
            ++
Sbjct: 121 LRK 123


>gi|331004908|ref|ZP_08328324.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989]
 gi|330421295|gb|EGG95545.1| SSU ribosomal protein S13p (S18e) [gamma proteobacterium IMCC1989]
          Length = 118

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 85/117 (72%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L Y++GIG  +++ I  ++ I    ++ +L E+++ +IR  +
Sbjct: 1   MARIAGVNIPDHKHAVISLTYVYGIGSTTAKRILAEVGIAEATKISELSETDMDRIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            ++  VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AKE-TVEGDLRREVSMNIKRLMDLGCYRGIRHRRNLPLRGQRTKTNARTRKGPRKPI 116


>gi|313204941|ref|YP_004043598.1| SSU ribosomal protein s13p [Paludibacter propionicigenes WB4]
 gi|312444257|gb|ADQ80613.1| SSU ribosomal protein S13P [Paludibacter propionicigenes WB4]
          Length = 126

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/113 (49%), Positives = 74/113 (65%), Gaps = 1/113 (0%)

Query: 1   MA-RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           MA RI GV++P+ KR    L YI+GIG  S++ I     +  + +V    + +  +IR+ 
Sbjct: 1   MAIRIVGVDLPQNKRGEVGLTYIYGIGRSSAKKILESAGVDIDIKVKDWTDDQAAKIREI 60

Query: 60  IEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           I   ++VEGDLR  V  NIKRLMD+GCYRG+RHR GLP+RGQ T  NARTRK 
Sbjct: 61  IGAGFKVEGDLRSEVQTNIKRLMDIGCYRGVRHRIGLPLRGQSTKNNARTRKG 113


>gi|213962874|ref|ZP_03391134.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno]
 gi|213954531|gb|EEB65853.1| 30S ribosomal protein S13 [Capnocytophaga sputigena Capno]
          Length = 124

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEISRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|109897336|ref|YP_660591.1| 30S ribosomal protein S13 [Pseudoalteromonas atlantica T6c]
 gi|122972199|sp|Q15X51|RS13_PSEA6 RecName: Full=30S ribosomal protein S13
 gi|109699617|gb|ABG39537.1| SSU ribosomal protein S13P [Pseudoalteromonas atlantica T6c]
 gi|332175077|gb|AEE24331.1| 30S ribosomal protein S13 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 118

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I G+G   +Q IC    +    ++  L E+++ ++R  +
Sbjct: 1   MARIAGINIPEHKHTVIALTAIFGVGSTRAQSICEAAGVAETTKIKDLDEAQIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKAI 116


>gi|302524018|ref|ZP_07276360.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4]
 gi|302432913|gb|EFL04729.1| archaeal ribosomal protein S13P [Streptomyces sp. AA4]
          Length = 126

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/117 (47%), Positives = 83/117 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV++PR KR+  AL YI+GIG   S+ +     +  + RV  L + ++++++  I
Sbjct: 1   MARLAGVDLPREKRLEIALTYIYGIGRTRSKQMIAAAELNADTRVKDLSDEDLVKLKDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +++++VEGDLRR V  +I+R +++G Y+GLR RRGLPVRGQRT TNARTRK   K  
Sbjct: 61  DENFKVEGDLRREVNADIRRKIEIGTYQGLRWRRGLPVRGQRTKTNARTRKGPKKTV 117


>gi|310779571|ref|YP_003967904.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926]
 gi|309748894|gb|ADO83556.1| SSU ribosomal protein S13P [Ilyobacter polytropus DSM 2926]
          Length = 118

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG  +SQ +  +  +    RV  L E E+ ++R  I
Sbjct: 1   MARIAGVDIPRNKRIEIALTYIYGIGKSTSQKVLKEAGVDFNTRVKDLTEEELNKVRAII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +   +VEGDLR+ V +++KRLMD+ CYRGLRH+  LPVRGQ++ TNART K   K  
Sbjct: 61  DT-VKVEGDLRKDVRLSVKRLMDIRCYRGLRHKMNLPVRGQKSKTNARTVKGPKKPI 116


>gi|315225423|ref|ZP_07867237.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287]
 gi|314944696|gb|EFS96731.1| 30S ribosomal protein S13 [Capnocytophaga ochracea F0287]
          Length = 124

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG   +++I ++  +  + +V +  + E+ +IR+ +
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGKSRAKEILSRAQVNEDTKVSEWNDDEITRIREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              Y++EG+LR  + +NIKRLMD+GCYRG+RHR GLP+RGQ+T  N+RTRK   K    +
Sbjct: 61  AS-YKIEGELRSEIQLNIKRLMDIGCYRGIRHRNGLPLRGQKTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|54307563|ref|YP_128583.1| 30S ribosomal protein S13 [Photobacterium profundum SS9]
 gi|81615623|sp|Q6LV94|RS13_PHOPR RecName: Full=30S ribosomal protein S13
 gi|46911983|emb|CAG18781.1| putative ribosomal protein S13 [Photobacterium profundum SS9]
          Length = 118

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ +  +  I    ++ +L E ++  +R+ +
Sbjct: 1   MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLREGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|30468201|ref|NP_849088.1| ribosomal protein S13 [Cyanidioschyzon merolae strain 10D]
 gi|32363230|sp|P59758|RR13_CYAME RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|30409301|dbj|BAC76250.1| 30S ribosomal protein S13 [Cyanidioschyzon merolae strain 10D]
          Length = 123

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/119 (48%), Positives = 82/119 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGV++P  K++  AL Y++GIG   +++I     + P+ RV  + + + +++RQ IEQ
Sbjct: 2   RIAGVDLPSQKKLEVALTYLYGIGKTLAKEILEACQLSPDLRVRDVNDEQSMRLRQYIEQ 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            Y +E DL+R  +MNIKRLMD+GCYRG RHR  LPVRGQRT +NARTR+   K    +K
Sbjct: 62  KYLIESDLKRVESMNIKRLMDIGCYRGRRHRALLPVRGQRTRSNARTRRGAKKTVAGKK 120


>gi|162446982|ref|YP_001620114.1| 30S ribosomal protein S13 [Acholeplasma laidlawii PG-8A]
 gi|189040489|sp|A9NEF8|RS13_ACHLI RecName: Full=30S ribosomal protein S13
 gi|161985089|gb|ABX80738.1| small subunit ribosomal protein S13 [Acholeplasma laidlawii PG-8A]
          Length = 124

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L YI+GIG  ++Q++     +  + RV  L + ++  IR  +
Sbjct: 1   MARIAGVDIPTQKRVVISLQYIYGIGQTTAQEVLKNANVSEDIRVKDLNDDQLSAIRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +    EGDLRR   +NIKRLM++G YRG+RHR+GLPV GQ T  NARTRK   K    +
Sbjct: 61  AK-IVTEGDLRRESTLNIKRLMEIGSYRGIRHRKGLPVNGQNTRNNARTRKGKPKAVTGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|308048013|ref|YP_003911579.1| 30S ribosomal protein S13P [Ferrimonas balearica DSM 9799]
 gi|307630203|gb|ADN74505.1| SSU ribosomal protein S13P [Ferrimonas balearica DSM 9799]
          Length = 118

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC +  I  + +   L E+ + ++R+ +
Sbjct: 1   MARIAGINIPEHKHAVVALTAIFGIGQTRAKAICVEAGIAEDVKFKDLDEATIDKVREVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Q + VEGDLRR ++MNIKRLMDLGC+RGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  GQ-FTVEGDLRREISMNIKRLMDLGCFRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|299768688|ref|YP_003730714.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1]
 gi|298698776|gb|ADI89341.1| 30S ribosomal protein S13 [Acinetobacter sp. DR1]
          Length = 118

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILATVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|193211875|ref|YP_001997828.1| 30S ribosomal protein S13 [Chlorobaculum parvum NCIB 8327]
 gi|226712712|sp|B3QR95|RS13_CHLP8 RecName: Full=30S ribosomal protein S13
 gi|193085352|gb|ACF10628.1| ribosomal protein S13 [Chlorobaculum parvum NCIB 8327]
          Length = 125

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/115 (51%), Positives = 79/115 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL Y++GIG  S+++I  K  + P++++ +L + E   IR+ I  
Sbjct: 2   RLAGVNLPLNKHAVIALTYVYGIGNTSAKNILAKAGVAPDKKISELSDEEAHAIREIIGN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           +Y VEG+ R    ++IKRLMD+GCYRGLRHRR LP RGQRT TNARTRK   K  
Sbjct: 62  EYTVEGEARAEQQLSIKRLMDIGCYRGLRHRRSLPARGQRTRTNARTRKGKRKTV 116


>gi|329298512|ref|ZP_08255848.1| 30S ribosomal protein S13 [Plautia stali symbiont]
          Length = 118

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NI   K  V AL  I GIG   S+ IC +  I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINISDQKHTVIALTSIFGIGKTRSKAICAETGIAENVKISELSEEQIDQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  GK-FVVEGDLRRKITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 116


>gi|330723974|gb|AEC46344.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis MCLD]
          Length = 122

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/121 (50%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KRVV AL YI GIG   S++I  K  I    R   L ES++  IR+ +
Sbjct: 1   MARILNIEIPNDKRVVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +DY  EGDLRR V +NIKR++++  Y+G+RHR+GLPVRGQ T  NARTRK   K  + +
Sbjct: 60  AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRKGPRKTVMGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|237753000|ref|ZP_04583480.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430]
 gi|229375267|gb|EEO25358.1| 30s ribosomal protein s13 [Helicobacter winghamensis ATCC BAA-430]
          Length = 122

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+G+G K+S+DI N + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGVGLKTSRDILNAVKISYDKRVQDLSEDEVSSIAKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   + 
Sbjct: 61  QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|90414978|ref|ZP_01222940.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK]
 gi|90323917|gb|EAS40517.1| 30S ribosomal protein S13 [Photobacterium profundum 3TCK]
          Length = 118

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   S+ +  +  I    ++ +L E ++  +R  +
Sbjct: 1   MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSEEQIDLLRDGV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|71083783|ref|YP_266503.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763181|ref|ZP_01265145.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002]
 gi|91207713|sp|Q4FLN9|RS13_PELUB RecName: Full=30S ribosomal protein S13
 gi|71062896|gb|AAZ21899.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717594|gb|EAS84245.1| 30S ribosomal protein S13 [Candidatus Pelagibacter ubique HTCC1002]
          Length = 127

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP+ K V   L YI+GIG K S  IC  L IP  +R+++L + ++++IR+ I
Sbjct: 1   MARIAGVNIPQNKLVHIGLTYIYGIGNKFSSQICTSLEIPKAKRINELTDEDILKIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +++VEGDLRR  ++ IKRL+DL CYRG RHR+ LPVRGQRT  NARTRK        +
Sbjct: 61  DANFKVEGDLRRDYSLTIKRLIDLACYRGSRHRKKLPVRGQRTRCNARTRKGKAIAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|34849415|gb|AAP58914.1| ribosomal protein S13 [Spiroplasma kunkelii CR2-3x]
          Length = 121

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KRVV AL YI+GIG   SQ I  +  I  + RV  L E E+  IR  I
Sbjct: 1   MARIGGVDIPNDKRVVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  + EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ +  NART K   K    +
Sbjct: 61  AK-LKTEGDLRREVALNIKRLMEIGSYRGMRHRKSLPTRGQSSKQNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|91205855|ref|YP_538210.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C]
 gi|157826785|ref|YP_001495849.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389]
 gi|122425381|sp|Q1RHP3|RS13_RICBR RecName: Full=30S ribosomal protein S13
 gi|166231920|sp|A8GVD5|RS13_RICB8 RecName: Full=30S ribosomal protein S13
 gi|91069399|gb|ABE05121.1| 30S ribosomal protein S13 [Rickettsia bellii RML369-C]
 gi|157802089|gb|ABV78812.1| 30S ribosomal protein S13 [Rickettsia bellii OSU 85-389]
          Length = 125

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   ++ IC K  I  +++V  L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGTTMAKTICKKAKILEDKKVKDLTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+  Y+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ENEYKVEGDLRREVTLNIKKKKDIRSYQGLRHIRKLPVRGQNTHSNARTRKGKAVAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|262280203|ref|ZP_06057987.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202]
 gi|262257981|gb|EEY76715.1| 30S ribosomal protein S13 [Acinetobacter calcoaceticus RUH2202]
          Length = 118

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V +L YI G+G  ++++I   + I    ++ +L ++++  IR  +
Sbjct: 1   MARIAGVNIPDNKHAVISLTYIFGVGRHTAKNILTAVGITETTKIRELDDAQLDAIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +    EGDLRR ++MNIKRLMDLGCYRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-VPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|91216887|ref|ZP_01253851.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755]
 gi|91185048|gb|EAS71427.1| 30S ribosomal protein S13 [Psychroflexus torquis ATCC 700755]
          Length = 124

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI GIG   ++ +  +  +    +V    + ++ +IR  +
Sbjct: 1   MARIAGVDIPKQKRGVIALTYIFGIGNSRAKKVLKEAGVDESIKVSDWNDDQIGKIRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++  +EG+LR  V ++IKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GKN-TIEGELRSQVQIHIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|47459094|ref|YP_015956.1| 30S ribosomal protein S13 [Mycoplasma mobile 163K]
 gi|81614321|sp|Q6KI31|RS13_MYCMO RecName: Full=30S ribosomal protein S13
 gi|47458423|gb|AAT27745.1| 30S ribosomal protein s13 [Mycoplasma mobile 163K]
          Length = 122

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  V IP  KRV+ +L Y++GIG   S+ I  +  I    RV  L E ++ +IR  I
Sbjct: 1   MARILNVEIPNNKRVIISLTYVYGIGRSLSKQILAEANIDENIRVKDLSEEDLTKIRN-I 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              +  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  ASRFTTEGDLRREIQLNIKRLMEIKSYRGIRHRKGLPVRGQVTQKNARTRKGPRKTVAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|320526892|ref|ZP_08028082.1| 30S ribosomal protein S13 [Solobacterium moorei F0204]
 gi|320132860|gb|EFW25400.1| 30S ribosomal protein S13 [Solobacterium moorei F0204]
          Length = 121

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R AGV+IPR K +  +L YI+GIG  ++++I     I    R + L E++   IR+ I
Sbjct: 1   MPRFAGVDIPRNKVIGVSLTYIYGIGPTTAKNILAACGIDENTRTNDLTEAQETAIREKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +   + EGDLRR  A++IKRLM++G YRG+RHRRGLPVRGQRT TNARTRK   +    +
Sbjct: 61  DA-IKTEGDLRRDRALDIKRLMEIGSYRGIRHRRGLPVRGQRTRTNARTRKGPRRTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|255069915|ref|XP_002507039.1| ribosomal protein S13, chloroplast precursor [Micromonas sp.
           RCC299]
 gi|226522314|gb|ACO68297.1| ribosomal protein S13, chloroplast precursor [Micromonas sp.
           RCC299]
          Length = 176

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  K+   AL Y++GIG  +++ I  K  +   +RV +  E E+  +R  ++
Sbjct: 58  ARVAGVEIPNNKKAEIALTYVYGIGNTTAKKIMAKTGL-ENKRVREFEEEELTILRAEVD 116

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             Y +EGDLRR   +NIKRL ++ CYRG RH RGLPVRGQRT TNARTRK   K    +K
Sbjct: 117 T-YMIEGDLRRFNMLNIKRLKEIQCYRGRRHIRGLPVRGQRTKTNARTRKGKVKTVAGKK 175

Query: 122 R 122
           +
Sbjct: 176 K 176


>gi|271962661|ref|YP_003336857.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021]
 gi|270505836|gb|ACZ84114.1| 30S ribosomal protein S13 [Streptosporangium roseum DSM 43021]
          Length = 126

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/110 (50%), Positives = 78/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   + +      +  + RVHQL + E++ +R  I
Sbjct: 1   MARLVGVDLPRDKRLEIALTYIFGIGRTRALETLKATGVNGDLRVHQLTDEELVPLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y++EGDLRR V  +I+R +++ CY+G+RHRRGLPV GQRT TNARTR
Sbjct: 61  EANYKIEGDLRREVQADIRRKIEIQCYQGIRHRRGLPVHGQRTQTNARTR 110


>gi|262277115|ref|ZP_06054908.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114]
 gi|262224218|gb|EEY74677.1| 30S ribosomal protein S13 [alpha proteobacterium HIMB114]
          Length = 127

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 86/121 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GVN+P  K+V  AL YI+GIG   +  IC +L I   +RV+ L + EV++IR+ I
Sbjct: 1   MARISGVNLPLNKQVHIALQYIYGIGDHYADKICKELNIEKSKRVNNLTDDEVLKIRELI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ + VEGDLRR +++NIKRL DLG YRG RHR+ LPVRGQRT +NARTRK        +
Sbjct: 61  DEKFTVEGDLRREISLNIKRLRDLGTYRGTRHRKKLPVRGQRTSSNARTRKGKAIAIAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|284033974|ref|YP_003383905.1| 30S ribosomal protein S13 [Kribbella flavida DSM 17836]
 gi|283813267|gb|ADB35106.1| ribosomal protein S13 [Kribbella flavida DSM 17836]
          Length = 123

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI G+G   +        I  ++RVH+L + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVALTYIFGVGRTRALKTLEATGISGDKRVHELGDEELVKLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y++EGDLRR V  +I+R +++G Y+G RHR GLPVRGQRT TNAR+RK   K    +
Sbjct: 61  EGNYKIEGDLRREVTADIRRKIEIGSYQGRRHRSGLPVRGQRTRTNARSRKGRRKAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|282898336|ref|ZP_06306327.1| Ribosomal protein S13 [Raphidiopsis brookii D9]
 gi|281196867|gb|EFA71772.1| Ribosomal protein S13 [Raphidiopsis brookii D9]
          Length = 126

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/122 (57%), Positives = 88/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG + SQDI     + P+ RV  L ++++  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|77165766|ref|YP_344291.1| 30S ribosomal protein S13 [Nitrosococcus oceani ATCC 19707]
 gi|254433474|ref|ZP_05046982.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27]
 gi|91207709|sp|Q3J8T5|RS13_NITOC RecName: Full=30S ribosomal protein S13
 gi|76884080|gb|ABA58761.1| SSU ribosomal protein S13P [Nitrosococcus oceani ATCC 19707]
 gi|207089807|gb|EDZ67078.1| ribosomal protein S13p/S18e [Nitrosococcus oceani AFC27]
          Length = 118

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/115 (55%), Positives = 85/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC  + +P ++++  L ++E+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALSSIYGIGLSRARKICGAVGVPSDKKIRDLSDNELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + Y VEGDLRR ++M+IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   +
Sbjct: 61  AK-YPVEGDLRREISMDIKRLMDLGCYRGIRHRRGLPVRGQRTQTNARTRKGPRR 114


>gi|328478179|gb|EGF48022.1| 30S ribosomal protein S13 [Lactobacillus rhamnosus MTCC 5462]
          Length = 126

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/121 (52%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K++V AL YI+G+G  ++Q +     +P + R   L   +  +IR A+
Sbjct: 1   MARIAGVDLPRGKQIVIALTYIYGVGKTTAQKVLKTAGVPEDVRQDDLTPEQEDKIRAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  Y+VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  NARTRK   +    R
Sbjct: 61  DS-YKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKKQRWQVR 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|167945793|ref|ZP_02532867.1| 30S ribosomal protein S13 [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 118

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  + AL  I+G+G   +  IC    I P  ++ +L E+++  IR  +
Sbjct: 1   MARIAGVNIPDRKHAIIALTSIYGVGRTRAAGICEATGIAPSTKILELSEAQLEAIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+MNIKRLMDLGC RG+RHRRGLP+RGQRT TNARTRK   +  
Sbjct: 61  AK-FTVEGDLRREVSMNIKRLMDLGCNRGIRHRRGLPLRGQRTKTNARTRKGPRRPI 116


>gi|119511157|ref|ZP_01630274.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414]
 gi|119464145|gb|EAW45065.1| 30S ribosomal protein S13 [Nodularia spumigena CCY9414]
          Length = 126

 Score =  161 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L YI+GIG   S +I     + P+ RV  L ++EV  +R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYIYGIGLTRSLEILAATGVNPDTRVKDLSDAEVAALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  AM+IKRL+D+GCYRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLEAMSIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|75906936|ref|YP_321232.1| 30S ribosomal protein S13 [Anabaena variabilis ATCC 29413]
 gi|91207688|sp|Q3MF99|RS13_ANAVT RecName: Full=30S ribosomal protein S13
 gi|75700661|gb|ABA20337.1| SSU ribosomal protein S13P [Anabaena variabilis ATCC 29413]
          Length = 126

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ+I     + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLSDADVAALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|91791561|ref|YP_561212.1| 30S ribosomal protein S13 [Shewanella denitrificans OS217]
 gi|122969076|sp|Q12ST7|RS13_SHEDO RecName: Full=30S ribosomal protein S13
 gi|91713563|gb|ABE53489.1| SSU ribosomal protein S13P [Shewanella denitrificans OS217]
          Length = 118

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICASTAIAETAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YSVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|218508351|ref|ZP_03506229.1| 30S ribosomal protein S13 [Rhizobium etli Brasil 5]
          Length = 111

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/107 (72%), Positives = 89/107 (83%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           V AL YIHGIG K +Q+I  K+ IP ERRVHQL ++EV+QIR+AI++DYQVEGDLRR  A
Sbjct: 5   VIALTYIHGIGPKFAQEIVEKVGIPAERRVHQLTDAEVLQIREAIDRDYQVEGDLRRETA 64

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK   K    +K+
Sbjct: 65  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPAKAIAGKKK 111


>gi|160902231|ref|YP_001567812.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
 gi|189044285|sp|A9BFZ3|RS13_PETMO RecName: Full=30S ribosomal protein S13
 gi|160359875|gb|ABX31489.1| ribosomal protein S13 [Petrotoga mobilis SJ95]
          Length = 121

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 83/121 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV +P  K +   L YI+GIG K++ DI N L I P +R  +L + E+ ++   I
Sbjct: 1   MARILGVEVPDNKALFVGLTYIYGIGRKTALDILNNLEIDPNKRAKELTDDEISRLSHHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y+VEG+LR+ +  NIKRL+D+G YRG RH+ GLPVRGQ+TH+NARTRK      + +
Sbjct: 61  NENYKVEGELRQEINKNIKRLIDIGSYRGKRHKAGLPVRGQKTHSNARTRKGPRLTKIKK 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|15604483|ref|NP_221001.1| 30S ribosomal protein S13 [Rickettsia prowazekii str. Madrid E]
 gi|6226062|sp|Q9ZCS7|RS13_RICPR RecName: Full=30S ribosomal protein S13
 gi|3861177|emb|CAA15077.1| 30S RIBOSOMAL PROTEIN S13 (rpsM) [Rickettsia prowazekii]
 gi|292572265|gb|ADE30180.1| 30S ribosomal protein S13 [Rickettsia prowazekii Rp22]
          Length = 125

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V  L + E+I +R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKKVKVLTDQELISLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDL+R V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|89891133|ref|ZP_01202641.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7]
 gi|89516777|gb|EAS19436.1| 30S ribosomal protein S13 (rpsM) [Flavobacteria bacterium BBFL7]
          Length = 124

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR   +L YI+GIG   ++ +     +  +++V +  + E+ +IR AI
Sbjct: 1   MARIAGVDIPKNKRGEVSLTYIYGIGRNRAKQVLIDTGVGLDKKVSEWNDDEIGKIRSAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EG+LR    +NIKRLMD+GCYRG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GE-FTIEGELRSETQLNIKRLMDIGCYRGIRHRSGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|256821684|ref|YP_003145647.1| 30S ribosomal protein S13 [Kangiella koreensis DSM 16069]
 gi|256795223|gb|ACV25879.1| ribosomal protein S13 [Kangiella koreensis DSM 16069]
          Length = 118

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K    AL  I+GIG   +Q IC    +    ++  L + ++  +R  +
Sbjct: 1   MARIAGINIPVHKHADVALTAIYGIGRPRAQKICAAAGVETTAKIKDLNDDQIENLRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR + MNIKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  SK-FTVEGDLRREINMNIKRLMDLGCFRGIRHRRNLPLRGQRTKTNARTRKGPRKPI 116


>gi|126176333|ref|YP_001052482.1| 30S ribosomal protein S13 [Shewanella baltica OS155]
 gi|152998771|ref|YP_001364452.1| 30S ribosomal protein S13 [Shewanella baltica OS185]
 gi|160873347|ref|YP_001552663.1| 30S ribosomal protein S13 [Shewanella baltica OS195]
 gi|217975179|ref|YP_002359930.1| 30S ribosomal protein S13 [Shewanella baltica OS223]
 gi|304412786|ref|ZP_07394388.1| 30S ribosomal protein S13 [Shewanella baltica OS183]
 gi|307307450|ref|ZP_07587185.1| 30S ribosomal protein S13 [Shewanella baltica BA175]
 gi|166231923|sp|A3DA50|RS13_SHEB5 RecName: Full=30S ribosomal protein S13
 gi|166231924|sp|A6WHV0|RS13_SHEB8 RecName: Full=30S ribosomal protein S13
 gi|189044294|sp|A9KWC3|RS13_SHEB9 RecName: Full=30S ribosomal protein S13
 gi|254811164|sp|B8EBI3|RS13_SHEB2 RecName: Full=30S ribosomal protein S13
 gi|125999538|gb|ABN63613.1| SSU ribosomal protein S13P [Shewanella baltica OS155]
 gi|151363389|gb|ABS06389.1| ribosomal protein S13 [Shewanella baltica OS185]
 gi|160858869|gb|ABX47403.1| ribosomal protein S13 [Shewanella baltica OS195]
 gi|217500314|gb|ACK48507.1| ribosomal protein S13 [Shewanella baltica OS223]
 gi|304348866|gb|EFM13282.1| 30S ribosomal protein S13 [Shewanella baltica OS183]
 gi|306910238|gb|EFN40671.1| 30S ribosomal protein S13 [Shewanella baltica BA175]
 gi|315265575|gb|ADT92428.1| 30S ribosomal protein S13 [Shewanella baltica OS678]
          Length = 118

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/117 (56%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   ++ IC   AI    ++ +L E+++  +R+ +
Sbjct: 1   MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDILREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR ++MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-YIVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|197294606|ref|YP_001799147.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense]
 gi|226712773|sp|B1VAC3|RS13_PHYAS RecName: Full=30S ribosomal protein S13
 gi|171853933|emb|CAM11896.1| 30S ribosomal protein S13 [Candidatus Phytoplasma australiense]
          Length = 121

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K SQ I N+L I  + RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGKKLSQKILNELNISHDIRVKNLTEQQLSSLRSEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K   K    +
Sbjct: 61  TK-YSVEGDLRREVTLNIKRLMEIGVYRGLRHRKGLPVRGQKTRNNAHTVKGKPKSIAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|58427778|gb|AAW76815.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 134

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 17  MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 77  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 132


>gi|283794916|ref|YP_003359269.1| ribosomal protein S13 [Cryptomonas paramecium]
 gi|253981888|gb|ACT46805.1| ribosomal protein S13 [Cryptomonas paramecium]
          Length = 125

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P+ KRV  AL Y++GIG  +SQ I  K  + P  R   L + +V  I++ I
Sbjct: 1   MTRIAGVDLPKNKRVEIALTYMYGIGLSTSQLILAKSNVDPNVRCRDLTDHDVSSIKETI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++ Y VEG ++R  +++IKRL+++ C RG RH   LPVRGQRT TNARTRK   K    +
Sbjct: 61  DKHYLVEGAIKRIESISIKRLIEINCTRGKRHTLNLPVRGQRTRTNARTRKGVKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|304373167|ref|YP_003856376.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1]
 gi|304309358|gb|ADM21838.1| 30S ribosomal protein S13 [Mycoplasma hyorhinis HUB-1]
          Length = 122

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI  + IP  KR+V AL YI GIG   S++I  K  I    R   L ES++  IR+ +
Sbjct: 1   MARILNIEIPNDKRIVIALTYIFGIGKSRSKEILAKCNINENVRTKDLSESQLQAIRE-V 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +DY  EGDLRR V +NIKR++++  Y+G+RHR+GLPVRGQ T  NARTRK   K  + +
Sbjct: 60  AKDYTTEGDLRREVQLNIKRMIEIKSYKGIRHRKGLPVRGQVTQKNARTRKGPRKTVMGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|313673443|ref|YP_004051554.1| SSU ribosomal protein s13p [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940199|gb|ADR19391.1| SSU ribosomal protein S13P [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 122

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 89/122 (72%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGV+IP  K++   L YI+GIG  ++  I ++L +   +++  L E E+  IR+ I
Sbjct: 1   MARVAGVDIPNNKKLEIGLTYIYGIGRSTANRIIDELNLDRNKKIGDLTEQEISSIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-GKGGVA 119
           +++ +VEGDLR+ +A+NIKRL+++ CYRG RH+ G+PVRGQ+T +NARTR+   GK G+ 
Sbjct: 61  DENLKVEGDLRKDIALNIKRLIEINCYRGYRHKNGMPVRGQKTRSNARTRRGLAGKRGIK 120

Query: 120 RK 121
           RK
Sbjct: 121 RK 122


>gi|269469223|gb|EEZ80754.1| ribosomal protein S13 [uncultured SUP05 cluster bacterium]
          Length = 117

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   ++ IC +L I P  +  +L E ++  IR A+
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAKAICAELKIDPATKTAELSEDQLELIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + ++VEGDLRR VAM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK   +  
Sbjct: 61  AK-FEVEGDLRRQVAMDIKRLKDLGCYRGIRHRKSLPLRGQRTKTNARTRKGPRRLI 116


>gi|254495364|ref|ZP_05108288.1| 30S ribosomal protein S13 [Polaribacter sp. MED152]
 gi|85819718|gb|EAQ40875.1| 30S ribosomal protein S13 [Polaribacter sp. MED152]
          Length = 121

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   ++ +  +  +    +V    + ++  IR+ +
Sbjct: 1   MARIAGIDIPKNKRGVIALTYIFGIGNSRAKKVLAEAKVDESIKVQDWTDEQIAAIREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GS-FTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|298491420|ref|YP_003721597.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708]
 gi|298233338|gb|ADI64474.1| 30S ribosomal protein S13 ['Nostoc azollae' 0708]
          Length = 126

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L YI+GIG   SQ+I     + P+ RV  L ++++  +R  I
Sbjct: 1   MARISGVDLPRDKRIEIGLTYIYGIGLSRSQEILAATGVNPDTRVKDLNDADIAALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|110004252|emb|CAK98590.1| 30s ribosomal protein s13 [Spiroplasma citri]
          Length = 121

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 79/122 (64%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV+IP  KR V AL YI+GIG   SQ I  +  I  + RV  L E E+  IR  I
Sbjct: 1   MARIGGVDIPNDKRAVIALTYIYGIGKPQSQQILKEAKISEDIRVKDLSEDELTTIRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  ++EGDLRR VA+NIKRLM++G YRG+RHR+ LP RGQ +  NART K   K    +
Sbjct: 61  AK-LKIEGDLRREVALNIKRLMEIGSYRGMRHRKSLPARGQSSKQNARTVKGPRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|83814971|ref|YP_445189.1| 30S ribosomal protein S13 [Salinibacter ruber DSM 13855]
 gi|294507073|ref|YP_003571131.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
 gi|123529118|sp|Q2S3P2|RS13_SALRD RecName: Full=30S ribosomal protein S13
 gi|83756365|gb|ABC44478.1| ribosomal protein S13p/S18e [Salinibacter ruber DSM 13855]
 gi|294343401|emb|CBH24179.1| 30S ribosomal protein S13 [Salinibacter ruber M8]
          Length = 127

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/120 (50%), Positives = 77/120 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV++P  KR   AL  I+G+G   + +I  K  +  ++R  +  ESE  ++R+ I
Sbjct: 1   MPRIEGVDVPDDKRGEIALTDIYGVGQSRASEILEKAEVSVDKRPREWTESETKRVRRII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+DY VEG LR  V MNIKRL ++GCYRG RHR GLPV GQRT TNARTRK   K    R
Sbjct: 61  EEDYTVEGQLRTEVQMNIKRLKEIGCYRGKRHREGLPVNGQRTRTNARTRKGKRKTVAGR 120


>gi|77361713|ref|YP_341288.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis TAC125]
 gi|119472061|ref|ZP_01614319.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7]
 gi|91207718|sp|Q3IJK6|RS13_PSEHT RecName: Full=30S ribosomal protein S13
 gi|76876624|emb|CAI87846.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119445196|gb|EAW26488.1| 30S ribosomal protein S13 [Alteromonadales bacterium TW-7]
          Length = 118

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILAATGIAETTKIGELSDETLDVLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|313683418|ref|YP_004061156.1| SSU ribosomal protein s13p [Sulfuricurvum kujiense DSM 16994]
 gi|313156278|gb|ADR34956.1| SSU ribosomal protein S13P [Sulfuricurvum kujiense DSM 16994]
          Length = 123

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/123 (52%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG  +S+ I +   +   +RV +L E E   I + I
Sbjct: 1   MARIAGVDLPKKKRLEYALTYIYGIGLHTSRKILDATGLDYNKRVFELSEDEAATIAKEI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
                 VEGDLR+ VAM+IK LMDLG YRGLRHR+GLP RGQ+T TNARTRK   K   +
Sbjct: 61  RSSGIAVEGDLRKQVAMDIKALMDLGSYRGLRHRKGLPCRGQKTKTNARTRKGKKKTVGS 120

Query: 120 RKR 122
             +
Sbjct: 121 ATK 123


>gi|224417908|ref|ZP_03655914.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|242309342|ref|ZP_04808497.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489]
 gi|253827247|ref|ZP_04870132.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|313141449|ref|ZP_07803642.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|239523913|gb|EEQ63779.1| 30S ribosomal protein S13 [Helicobacter pullorum MIT 98-5489]
 gi|253510653|gb|EES89312.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
 gi|313130480|gb|EFR48097.1| 30S ribosomal protein S13 [Helicobacter canadensis MIT 98-5491]
          Length = 122

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KR+  AL YI+GIG K+S+DI N + I  ++RV  L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRIEYALTYIYGIGLKASRDILNAVNISYDKRVQDLGEDEVSAIAKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  + VEGDLR+ V M+IK LMDLG YRGLRHR+GLPVRGQ T  NARTRK   K   + 
Sbjct: 61  QAHHIVEGDLRKKVTMDIKALMDLGNYRGLRHRKGLPVRGQTTKNNARTRKGKRKTVGSA 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|325479172|gb|EGC82269.1| 30S ribosomal protein S13 [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 114

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTANEILKNAGINPDTKMKDLTEEELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             +Y +EGDLRR V+MNI+ L ++G YRGLRH+  LPVRGQ T  NA+TRK 
Sbjct: 61  -NNYNIEGDLRREVSMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNAKTRKG 111


>gi|145219085|ref|YP_001129794.1| 30S ribosomal protein S13 [Prosthecochloris vibrioformis DSM 265]
 gi|189044287|sp|A4SCT3|RS13_PROVI RecName: Full=30S ribosomal protein S13
 gi|145205249|gb|ABP36292.1| SSU ribosomal protein S13P [Chlorobium phaeovibrioides DSM 265]
          Length = 125

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 60/120 (50%), Positives = 82/120 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  +++ I  +  I P+R++  L ++E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTTAKTILQRTGIAPDRKISDLNDAEAHSIRELIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +Y+VEG  R    ++IKRLMD+GCYRGLRHRR LPVRGQ T TNARTRK   K    +K+
Sbjct: 62  EYKVEGQARGEQQLSIKRLMDVGCYRGLRHRRSLPVRGQNTQTNARTRKGKRKTVAGKKK 121


>gi|51473817|ref|YP_067574.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington]
 gi|81390000|sp|Q68WA0|RS13_RICTY RecName: Full=30S ribosomal protein S13
 gi|51460129|gb|AAU04092.1| 30S ribosomal protein S13 [Rickettsia typhi str. Wilmington]
          Length = 125

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA VNIP  KR+V +L YI+G+G   + +ICNK  I  +++V  L + E+I++R  I
Sbjct: 1   MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISRDKKVKVLTDQELIRLRNII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR V +NIK+  D+ CY+GLRH R LPVRGQ TH+NARTRK        +
Sbjct: 61  ENEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|312795800|ref|YP_004028722.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454]
 gi|312167575|emb|CBW74578.1| SSU ribosomal protein S13P [Burkholderia rhizoxinica HKI 454]
          Length = 121

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K  V  L  I GIG   ++ IC    +   ++V +L ++++ ++R  +
Sbjct: 1   MARIAGVNIPVHKHTVIGLQAILGIGASRARLICVAAGVDTSKKVKELTDADLEKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR V MNIKR MD+GCY G+RHR+GLP+RGQRT TNARTRK   +   A 
Sbjct: 61  AK-FVVEGDLRREVTMNIKRKMDIGCYEGVRHRKGLPMRGQRTRTNARTRKGPRRAAQAL 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|294055199|ref|YP_003548857.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
 gi|293614532|gb|ADE54687.1| 30S ribosomal protein S13 [Coraliomargarita akajimensis DSM 45221]
          Length = 120

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L Y++GIG   ++ I  +    P+RR   L E E+ Q+   +
Sbjct: 1   MPRILGVDIPANKKLEYSLRYVYGIGPTRAKTIVAEAGFDPDRRAGDLSEEELNQLATIV 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            ++ Y VEGDLRR +  N+KRL+ +  +RG+RH RGLPVRGQRT TNARTRK   K  
Sbjct: 61  ADKQYVVEGDLRREITANLKRLIAVRSWRGMRHARGLPVRGQRTKTNARTRKGGVKPI 118


>gi|320540704|ref|ZP_08040322.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson]
 gi|320029234|gb|EFW11295.1| 30S ribosomal subunit protein S13 [Serratia symbiotica str. Tucson]
          Length = 107

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/108 (59%), Positives = 77/108 (71%), Gaps = 1/108 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I GIG   SQ IC    I    ++ +L E ++ Q+R+A+
Sbjct: 1   MARIAGINIPDHKHTVIALTSIFGIGKTRSQSICASTGIAENVKISELSEEQIEQLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
            + + VEGDLRR V ++IKRLMDLG YRGLRHRRGLPVRGQRT TNAR
Sbjct: 61  AK-FTVEGDLRREVTLSIKRLMDLGTYRGLRHRRGLPVRGQRTKTNAR 107


>gi|319787904|ref|YP_004147379.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466416|gb|ADV28148.1| 30S ribosomal protein S13 [Pseudoxanthomonas suwonensis 11-1]
          Length = 118

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 64/117 (54%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPTHKHVWVGLQSIYGIGRTRSKKVCEAANVATTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YIVEGDLRREVGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|88803727|ref|ZP_01119251.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P]
 gi|88780460|gb|EAR11641.1| 30S ribosomal protein S13 [Polaribacter irgensii 23-P]
          Length = 121

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 80/122 (65%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP+ KR V AL YI GIG   ++ +  +  +    +V +  + ++  IR+ +
Sbjct: 1   MARIAGIDIPKNKRGVIALTYIFGIGSSRAKKVLAEAKVDESIKVQEWTDDQIAAIREQV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              + +EG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  GS-FTIEGELRSEVQINIKRLMDIGCQRGIRHRLGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|300114714|ref|YP_003761289.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113]
 gi|299540651|gb|ADJ28968.1| 30S ribosomal protein S13 [Nitrosococcus watsonii C-113]
          Length = 118

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG   ++ IC  + +P +++V  L ++E+  +R  +
Sbjct: 1   MARIAGINIPVHKHTVIALSSIYGIGLSRARKICKAVGVPSDKKVRDLSDNELEGLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + Y VEGDLRR ++M+IKRLMDLGCYRG RHRRGLPVRGQRT TNARTRK   +
Sbjct: 61  AK-YPVEGDLRRGISMDIKRLMDLGCYRGHRHRRGLPVRGQRTQTNARTRKGPRR 114


>gi|325921502|ref|ZP_08183357.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865]
 gi|325548049|gb|EGD19048.1| SSU ribosomal protein S13P [Xanthomonas gardneri ATCC 19865]
          Length = 123

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 6   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 65

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 66  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 121


>gi|303270835|ref|XP_003054779.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla
           CCMP1545]
 gi|226462753|gb|EEH60031.1| ribosomal protein S13, chloroplast precursor [Micromonas pusilla
           CCMP1545]
          Length = 182

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 80/121 (66%), Gaps = 1/121 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  KR   AL YI+G+G  +++ +     +   +R+ +  E E+ ++R+A++
Sbjct: 63  ARVAGVEIPNNKRAETALTYIYGVGDTTAKKVMATTGL-ENKRMREFEEDELTRLREAVD 121

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           +   +EGDLRR  +MNIKRL ++ CYRG RH +GLP RGQR+ TNARTRK   K    +K
Sbjct: 122 ELPLIEGDLRRFNSMNIKRLKEIQCYRGKRHIQGLPCRGQRSKTNARTRKGKVKTVAGKK 181

Query: 122 R 122
           +
Sbjct: 182 K 182


>gi|190572965|ref|YP_001970810.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia K279a]
 gi|254521260|ref|ZP_05133315.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14]
 gi|226712790|sp|B2FQK5|RS13_STRMK RecName: Full=30S ribosomal protein S13
 gi|190010887|emb|CAQ44496.1| putative 30S ribosomal protein S13 [Stenotrophomonas maltophilia
           K279a]
 gi|219718851|gb|EED37376.1| ribosomal protein S13p/S18e [Stenotrophomonas sp. SKA14]
          Length = 118

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|119502945|ref|ZP_01625030.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080]
 gi|119461291|gb|EAW42381.1| 30S ribosomal protein S13 [marine gamma proteobacterium HTCC2080]
          Length = 118

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AGVNIP  K  + +L YI+G+G   ++ + +   I  + +V +L E E+ Q+R  +
Sbjct: 1   MARLAGVNIPDNKHALVSLTYIYGVGRTQARRLLDATGISYQTKVGELSEGELDQLRGLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +  VEGDLRR V+MNIKRLMDLGC RGLRHR+GLP+RGQRT TNARTRK   K  
Sbjct: 61  -NELTVEGDLRREVSMNIKRLMDLGCNRGLRHRKGLPLRGQRTKTNARTRKGPRKPI 116


>gi|307154820|ref|YP_003890204.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822]
 gi|306985048|gb|ADN16929.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7822]
          Length = 127

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   SQ+I  +  + P+ RV  L + +   +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSQEILAETGVNPDTRVKDLSDEDTAALRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDLRR  +MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+        +
Sbjct: 61  ETNYQIEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|227501158|ref|ZP_03931207.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098]
 gi|227216743|gb|EEI82144.1| ribosomal protein S13 [Anaerococcus tetradius ATCC 35098]
          Length = 114

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 55/112 (49%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+GIG  +S +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGIGRSTSNEILKNAGINPDTKMKDLTEEELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             +Y +EGDLRR ++MNI+ L ++G YRGLRH+  LPVRGQ T  NARTRK 
Sbjct: 61  -NNYHIEGDLRRDISMNIRALKEIGSYRGLRHKNNLPVRGQNTKNNARTRKG 111


>gi|54778766|gb|AAV39600.1| ribosomal protein S13 [synthetic construct]
          Length = 145

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 80/116 (68%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+NIP  K  V AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + 
Sbjct: 26  ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVA 85

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 86  K-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 140


>gi|126662241|ref|ZP_01733240.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38]
 gi|126625620|gb|EAZ96309.1| 30S ribosomal protein S13 [Flavobacteria bacterium BAL38]
          Length = 124

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR + AL YI GIG   ++DI  K  +  +++V    + E+  IR A+
Sbjct: 1   MARIAGVDIPKQKRGIIALTYIFGIGKSRAKDILAKAQVSEDKKVQDWNDDEIGAIRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              +++EG+LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  S-YFKIEGELRSEIQLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|21241758|ref|NP_641340.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|66769621|ref|YP_244383.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78046576|ref|YP_362751.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84625023|ref|YP_452395.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|122879273|ref|YP_202200.6| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|166710853|ref|ZP_02242060.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188575511|ref|YP_001912440.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188992833|ref|YP_001904843.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. B100]
 gi|289665158|ref|ZP_06486739.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289669365|ref|ZP_06490440.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. musacearum
           NCPPB4381]
 gi|294627859|ref|ZP_06706438.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294664164|ref|ZP_06729550.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325925366|ref|ZP_08186768.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118]
 gi|32363342|sp|Q8NKX3|RS13_XANAC RecName: Full=30S ribosomal protein S13
 gi|81304424|sp|Q4URG0|RS13_XANC8 RecName: Full=30S ribosomal protein S13
 gi|91207633|sp|Q3BWW2|RS13_XANC5 RecName: Full=30S ribosomal protein S13
 gi|91207634|sp|Q5GWV6|RS13_XANOR RecName: Full=30S ribosomal protein S13
 gi|123521159|sp|Q2P006|RS13_XANOM RecName: Full=30S ribosomal protein S13
 gi|226712804|sp|B0RU61|RS13_XANCB RecName: Full=30S ribosomal protein S13
 gi|226712805|sp|B2SQT1|RS13_XANOP RecName: Full=30S ribosomal protein S13
 gi|18378766|gb|AAD00322.2| ribosomal protein S13 [Xanthomonas campestris pv. campestris]
 gi|21107130|gb|AAM35876.1| 30S ribosomal protein S13 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|66574953|gb|AAY50363.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|78035006|emb|CAJ22651.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84368963|dbj|BAE70121.1| 30S ribosomal protein S13 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|167734593|emb|CAP52803.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris]
 gi|188519963|gb|ACD57908.1| ribosomal protein S13p/S18e [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|292597773|gb|EFF41931.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292606067|gb|EFF49332.1| 30S ribosomal protein S13 [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|325544244|gb|EGD15625.1| SSU ribosomal protein S13P [Xanthomonas perforans 91-118]
          Length = 118

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|269128488|ref|YP_003301858.1| 30S ribosomal protein S13 [Thermomonospora curvata DSM 43183]
 gi|268313446|gb|ACY99820.1| ribosomal protein S13 [Thermomonospora curvata DSM 43183]
          Length = 126

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 59/110 (53%), Positives = 83/110 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +   +  +  + RVHQL + E++++R  I
Sbjct: 1   MARLVGVDLPRDKRIEVALTYIYGIGRTRALETLRQTGVNGDLRVHQLGDEELVKLRDWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y+VEGDLRR V  +I+R +++GCY+G+RHRRGLPVRGQRT TNARTR
Sbjct: 61  EANYKVEGDLRREVQADIRRKIEIGCYQGIRHRRGLPVRGQRTQTNARTR 110


>gi|297621701|ref|YP_003709838.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
 gi|297377002|gb|ADI38832.1| 30S ribosomal protein S13 [Waddlia chondrophila WSU 86-1044]
          Length = 122

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/110 (51%), Positives = 76/110 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G +IP  KR++ +L YI+GIG   +++I  KL + P  R   L E ++ +I   +
Sbjct: 1   MPRVIGTDIPDNKRLIISLTYIYGIGPFKAKEIIEKLQLDPNMRARGLTEDDIAKINTLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + DY VEGDLRR V  NIKRL+ + CYRG+RHR GLPVRGQRT +NARTR
Sbjct: 61  QNDYIVEGDLRRQVQNNIKRLISINCYRGIRHRSGLPVRGQRTQSNARTR 110


>gi|172038950|ref|YP_001805451.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142]
 gi|254811144|sp|B1WQT3|RS13_CYAA5 RecName: Full=30S ribosomal protein S13
 gi|171700404|gb|ACB53385.1| 30S ribosomal protein S13 [Cyanothece sp. ATCC 51142]
          Length = 127

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   SQ+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILAETGVNPDTRVRDLSDEDVAKLRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|196228477|ref|ZP_03127344.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
 gi|196227880|gb|EDY22383.1| ribosomal protein S13 [Chthoniobacter flavus Ellin428]
          Length = 128

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/124 (49%), Positives = 78/124 (62%), Gaps = 2/124 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV IP  KR+  +L YI+GIG  +++ I  +  I P+ R   L   ++ QI QAI
Sbjct: 1   MPRLLGVEIPGDKRIEASLPYIYGIGPSTAKRILEQANINPDVRAKDLSNEQLNQIIQAI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GV 118
                 +EGDLRR +  N+KRL  + CYRG+RHRR LPVRGQRT TNARTRK   K  GV
Sbjct: 61  TASKLPIEGDLRRELQSNLKRLQAINCYRGIRHRRSLPVRGQRTSTNARTRKGPRKTVGV 120

Query: 119 ARKR 122
            R +
Sbjct: 121 QRAK 124


>gi|218440645|ref|YP_002378974.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7424]
 gi|226712726|sp|B7KI09|RS13_CYAP7 RecName: Full=30S ribosomal protein S13
 gi|218173373|gb|ACK72106.1| ribosomal protein S13 [Cyanothece sp. PCC 7424]
          Length = 127

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   S++I     + P+ RV  L + + + +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSKEILANTGVNPDTRVKDLSDEDALALRSYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDLRR   MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+        +
Sbjct: 61  EANYQIEGDLRRWETMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|194364555|ref|YP_002027165.1| 30S ribosomal protein S13 [Stenotrophomonas maltophilia R551-3]
 gi|226712789|sp|B4SLH2|RS13_STRM5 RecName: Full=30S ribosomal protein S13
 gi|194347359|gb|ACF50482.1| ribosomal protein S13 [Stenotrophomonas maltophilia R551-3]
          Length = 118

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEVAGVASTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|17231685|ref|NP_488233.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120]
 gi|32363371|sp|Q8YPK1|RS13_ANASP RecName: Full=30S ribosomal protein S13
 gi|17133328|dbj|BAB75892.1| 30S ribosomal protein S13 [Nostoc sp. PCC 7120]
          Length = 126

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ+I     + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSQEIIAATGVNPDTRVKDLSDADVAALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  AMNIKRL+D+G YRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLEAMNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|218245118|ref|YP_002370489.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8801]
 gi|257058143|ref|YP_003136031.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 8802]
 gi|226712727|sp|B7K226|RS13_CYAP8 RecName: Full=30S ribosomal protein S13
 gi|218165596|gb|ACK64333.1| ribosomal protein S13 [Cyanothece sp. PCC 8801]
 gi|256588309|gb|ACU99195.1| ribosomal protein S13 [Cyanothece sp. PCC 8802]
          Length = 127

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 84/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L Y+ GIG   SQ+I  +  + P+ RV  L + EV  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYLFGIGLSRSQEILAETGVNPDTRVRDLTDEEVANLRAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQRT TNARTR+        +
Sbjct: 61  ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRVTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|297625815|ref|YP_003687578.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921580|emb|CBL56134.1| 30S ribosomal protein S13 [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 124

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/112 (50%), Positives = 80/112 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   +  I     I P+ RV  + +++++++R  I
Sbjct: 1   MARLQGVDLPREKRLEVALTYIFGIGKTRADAILEATGISPDIRVKDVTDAQLVELRDFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + +Y+VEGDLRR+V  +I+R +++G Y+G RHR GLPVRGQRT TNARTRK 
Sbjct: 61  DANYEVEGDLRRSVDADIRRKIEIGTYQGRRHRAGLPVRGQRTRTNARTRKG 112


>gi|166367997|ref|YP_001660270.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843]
 gi|189044281|sp|B0JY40|RS13_MICAN RecName: Full=30S ribosomal protein S13
 gi|159027083|emb|CAO89268.1| rpsM [Microcystis aeruginosa PCC 7806]
 gi|166090370|dbj|BAG05078.1| 30S ribosomal protein S13 [Microcystis aeruginosa NIES-843]
          Length = 127

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++G+G   SQ++ +   + P+ RV  L + +V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGVGLSRSQEVLSATGVNPDTRVKDLSDEDVAALRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR GLPVRGQRT TNARTR+        +
Sbjct: 61  ETNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRLGLPVRGQRTRTNARTRRGRRVTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|153871950|ref|ZP_02000983.1| Ribosomal protein S13 [Beggiatoa sp. PS]
 gi|152071586|gb|EDN69019.1| Ribosomal protein S13 [Beggiatoa sp. PS]
          Length = 118

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+   K  +  L  I+GIG K ++ IC   +I P  ++  L +  +  +R  +
Sbjct: 1   MARIAGINLSGHKHTIIGLTSIYGIGRKLAEKICEATSIDPSMKIKDLSDKNLETLRHEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR VAMNIKRLMDLGCYRG+RHRRGLP+RGQRT TNARTRK   +  
Sbjct: 61  AK-YDVEGDLRREVAMNIKRLMDLGCYRGMRHRRGLPLRGQRTRTNARTRKGPRRPI 116


>gi|46446065|ref|YP_007430.1| 30S ribosomal protein S13 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|81627551|sp|Q6ME44|RS13_PARUW RecName: Full=30S ribosomal protein S13
 gi|46399706|emb|CAF23155.1| probable 30S ribosomal protein S13 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 122

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G++IP  KR+  +L Y++GIG   S +I  KL + P  R H+L + ++ ++   +
Sbjct: 1   MPRVIGIDIPDNKRLEISLTYLYGIGRHLSNEIIVKLGLDPNMRAHKLTQDDLARLNGLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y VEGDLRR V  NIKRL+ +  YRG+RHR GLPVRGQRT TN+RTRK   K    +
Sbjct: 61  TSEYMVEGDLRRQVQNNIKRLISIHSYRGMRHRLGLPVRGQRTKTNSRTRKGRRKTVANK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|51245001|ref|YP_064885.1| 30S ribosomal protein S13 [Desulfotalea psychrophila LSv54]
 gi|81642539|sp|Q6AP46|RS13_DESPS RecName: Full=30S ribosomal protein S13
 gi|50876038|emb|CAG35878.1| probable 30S ribosomal protein S13 [Desulfotalea psychrophila
           LSv54]
          Length = 121

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/121 (55%), Positives = 83/121 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ K + RAL YIHGIG  S++ I + + +P       L    V +IR+ I
Sbjct: 1   MARIAGIDLPKNKHIDRALTYIHGIGLTSARKILDAVELPYTMNSDDLDGETVNRIRKVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY VEGD RR V+M+IKRL DLGCYRG RHR GLP RGQ+T TNARTRK   +G   R
Sbjct: 61  EADYTVEGDRRREVSMDIKRLTDLGCYRGRRHRMGLPCRGQKTKTNARTRKGPRRGAARR 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|117927540|ref|YP_872091.1| 30S ribosomal protein S13 [Acidothermus cellulolyticus 11B]
 gi|158706209|sp|A0LRP5|RS13_ACIC1 RecName: Full=30S ribosomal protein S13
 gi|117648003|gb|ABK52105.1| SSU ribosomal protein S13P [Acidothermus cellulolyticus 11B]
          Length = 126

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I P+ RV  L + +++++R+ I
Sbjct: 1   MARLVGVDLPRDKRLEVALTYIYGIGRTRALETLAATGISPDLRVRDLTDDDLLKLREWI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y+VEGDLRR VA +I+R +++GCY+G+RHRRGLPVRGQRTHTNARTRK   K    +
Sbjct: 61  EANYRVEGDLRREVAADIRRKIEIGCYQGIRHRRGLPVRGQRTHTNARTRKGPRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|50843286|ref|YP_056513.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202]
 gi|282855173|ref|ZP_06264505.1| 30S ribosomal protein S13 [Propionibacterium acnes J139]
 gi|289424822|ref|ZP_06426604.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187]
 gi|289427645|ref|ZP_06429357.1| 30S ribosomal protein S13 [Propionibacterium acnes J165]
 gi|295131355|ref|YP_003582018.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137]
 gi|81611215|sp|Q6A6Q8|RS13_PROAC RecName: Full=30S ribosomal protein S13
 gi|50840888|gb|AAT83555.1| 30S ribosomal protein S13 [Propionibacterium acnes KPA171202]
 gi|282581761|gb|EFB87146.1| 30S ribosomal protein S13 [Propionibacterium acnes J139]
 gi|289154785|gb|EFD03468.1| 30S ribosomal protein S13 [Propionibacterium acnes SK187]
 gi|289159136|gb|EFD07328.1| 30S ribosomal protein S13 [Propionibacterium acnes J165]
 gi|291376040|gb|ADD99894.1| 30S ribosomal protein S13 [Propionibacterium acnes SK137]
 gi|313763206|gb|EFS34570.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA1]
 gi|313773121|gb|EFS39087.1| 30S ribosomal protein S13 [Propionibacterium acnes HL074PA1]
 gi|313793289|gb|EFS41347.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA1]
 gi|313801067|gb|EFS42335.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA2]
 gi|313808808|gb|EFS47262.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA2]
 gi|313810398|gb|EFS48112.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA1]
 gi|313812266|gb|EFS49980.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA1]
 gi|313816543|gb|EFS54257.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA1]
 gi|313817987|gb|EFS55701.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA2]
 gi|313819900|gb|EFS57614.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA1]
 gi|313823391|gb|EFS61105.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA2]
 gi|313824862|gb|EFS62576.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA1]
 gi|313828396|gb|EFS66110.1| 30S ribosomal protein S13 [Propionibacterium acnes HL063PA2]
 gi|313830104|gb|EFS67818.1| 30S ribosomal protein S13 [Propionibacterium acnes HL007PA1]
 gi|313832624|gb|EFS70338.1| 30S ribosomal protein S13 [Propionibacterium acnes HL056PA1]
 gi|313837980|gb|EFS75694.1| 30S ribosomal protein S13 [Propionibacterium acnes HL086PA1]
 gi|314914363|gb|EFS78194.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA4]
 gi|314917683|gb|EFS81514.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA1]
 gi|314919585|gb|EFS83416.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA3]
 gi|314924150|gb|EFS87981.1| 30S ribosomal protein S13 [Propionibacterium acnes HL001PA1]
 gi|314925757|gb|EFS89588.1| 30S ribosomal protein S13 [Propionibacterium acnes HL036PA3]
 gi|314930175|gb|EFS94006.1| 30S ribosomal protein S13 [Propionibacterium acnes HL067PA1]
 gi|314957152|gb|EFT01256.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA1]
 gi|314957793|gb|EFT01896.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA1]
 gi|314960837|gb|EFT04938.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA2]
 gi|314963511|gb|EFT07611.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA1]
 gi|314964879|gb|EFT08978.1| 30S ribosomal protein S13 [Propionibacterium acnes HL082PA2]
 gi|314969906|gb|EFT14004.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA1]
 gi|314973047|gb|EFT17143.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA1]
 gi|314975543|gb|EFT19638.1| 30S ribosomal protein S13 [Propionibacterium acnes HL045PA1]
 gi|314979768|gb|EFT23862.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA2]
 gi|314982285|gb|EFT26378.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA3]
 gi|314984826|gb|EFT28918.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA1]
 gi|314986085|gb|EFT30177.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA2]
 gi|314988700|gb|EFT32791.1| 30S ribosomal protein S13 [Propionibacterium acnes HL005PA3]
 gi|315077132|gb|EFT49199.1| 30S ribosomal protein S13 [Propionibacterium acnes HL053PA2]
 gi|315079819|gb|EFT51795.1| 30S ribosomal protein S13 [Propionibacterium acnes HL078PA1]
 gi|315083186|gb|EFT55162.1| 30S ribosomal protein S13 [Propionibacterium acnes HL027PA2]
 gi|315086860|gb|EFT58836.1| 30S ribosomal protein S13 [Propionibacterium acnes HL002PA3]
 gi|315089952|gb|EFT61928.1| 30S ribosomal protein S13 [Propionibacterium acnes HL072PA1]
 gi|315090474|gb|EFT62450.1| 30S ribosomal protein S13 [Propionibacterium acnes HL110PA4]
 gi|315093707|gb|EFT65683.1| 30S ribosomal protein S13 [Propionibacterium acnes HL060PA1]
 gi|315096726|gb|EFT68702.1| 30S ribosomal protein S13 [Propionibacterium acnes HL038PA1]
 gi|315097954|gb|EFT69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL059PA2]
 gi|315100597|gb|EFT72573.1| 30S ribosomal protein S13 [Propionibacterium acnes HL046PA1]
 gi|315103999|gb|EFT75975.1| 30S ribosomal protein S13 [Propionibacterium acnes HL050PA2]
 gi|315106040|gb|EFT78016.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA1]
 gi|315109200|gb|EFT81176.1| 30S ribosomal protein S13 [Propionibacterium acnes HL030PA2]
 gi|327325140|gb|EGE66946.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA3]
 gi|327325231|gb|EGE67036.1| 30S ribosomal protein S13 [Propionibacterium acnes HL096PA2]
 gi|327325527|gb|EGE67326.1| 30S ribosomal protein S13 [Propionibacterium acnes HL103PA1]
 gi|327332740|gb|EGE74474.1| 30S ribosomal protein S13 [Propionibacterium acnes HL097PA1]
 gi|327444031|gb|EGE90685.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA1]
 gi|327449341|gb|EGE95995.1| 30S ribosomal protein S13 [Propionibacterium acnes HL013PA2]
 gi|327449431|gb|EGE96085.1| 30S ribosomal protein S13 [Propionibacterium acnes HL043PA2]
 gi|327451453|gb|EGE98107.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA3]
 gi|327451572|gb|EGE98226.1| 30S ribosomal protein S13 [Propionibacterium acnes HL092PA1]
 gi|327451859|gb|EGE98513.1| 30S ribosomal protein S13 [Propionibacterium acnes HL083PA2]
 gi|328752073|gb|EGF65689.1| 30S ribosomal protein S13 [Propionibacterium acnes HL087PA1]
 gi|328755529|gb|EGF69145.1| 30S ribosomal protein S13 [Propionibacterium acnes HL025PA2]
 gi|328756314|gb|EGF69930.1| 30S ribosomal protein S13 [Propionibacterium acnes HL020PA1]
 gi|328761352|gb|EGF74879.1| 30S ribosomal protein S13 [Propionibacterium acnes HL099PA1]
          Length = 123

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/110 (51%), Positives = 78/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I  + RVH+L + +++ +R  I
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKATGISGDLRVHELTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E +Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR
Sbjct: 61  EANYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110


>gi|88861472|ref|ZP_01136098.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2]
 gi|88816520|gb|EAR26349.1| 30S ribosomal subunit protein S13 [Pseudoalteromonas tunicata D2]
          Length = 118

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V AL  I+G+G   S+ I     I    ++ +L +  +  +R+ +
Sbjct: 1   MARIAGINVPDHKHAVIALTAIYGVGKTRSKAILAATGIAETTKIGELNDETLDVLREEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  LK-YTVEGDLRREITLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKAI 116


>gi|325955020|ref|YP_004238680.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922]
 gi|323437638|gb|ADX68102.1| 30S ribosomal protein S13 [Weeksella virosa DSM 16922]
          Length = 125

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/112 (49%), Positives = 79/112 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++P+ KR V  L YI+G+G  ++  I  +  I  +++V +  + E+  IR +I
Sbjct: 1   MARISGVDLPKNKRGVIGLTYIYGVGKSTASRILAENNISEDKKVSEWTDDEINAIRNSI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +  +VEG+LR  V +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK 
Sbjct: 61  NEGIKVEGELRSEVQLNIKRLMDIGCTRGIRHRLGLPLRGQRTKNNSRTRKG 112


>gi|332037271|gb|EGI73726.1| 30S ribosomal protein S13 [Pseudoalteromonas haloplanktis ANT/505]
          Length = 118

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDEILDVLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|254422356|ref|ZP_05036074.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335]
 gi|196189845|gb|EDX84809.1| ribosomal protein S13p/S18e [Synechococcus sp. PCC 7335]
          Length = 126

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+G+G   SQ+I  K  + P  RV  L +++VI++R+ +
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGVGLSRSQEILEKTGVDPNIRVKDLADADVIKLRETV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DY +EGDLRR V MNIKRLMD+GCYRG RHR GLPVRGQRT TN+RTR+   +    +
Sbjct: 61  EGDYLIEGDLRRQVNMNIKRLMDIGCYRGRRHRMGLPVRGQRTRTNSRTRRSGKRTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|285017341|ref|YP_003375052.1| 30s ribosomal protein s13 [Xanthomonas albilineans GPE PC73]
 gi|283472559|emb|CBA15064.1| probable 30s ribosomal protein s13 [Xanthomonas albilineans]
          Length = 118

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKVCEAAGVTSTTKIRDLSEPEIERLRLEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YIVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|159485052|ref|XP_001700563.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii]
 gi|158272203|gb|EDO98007.1| plastid ribosomal protein S13 [Chlamydomonas reinhardtii]
          Length = 164

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+  V IP +KR+  +L YI GIG  ++Q I     +   ++ ++L E E+ ++R  +E+
Sbjct: 44  RVNNVEIPNSKRIEVSLQYIFGIGETTAQTILRDTGV-ENKKTYELNEEEINKLRSEVEK 102

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y  E DLRR VA NIKRL D+GCYRG RH  GLPVRGQRT TNARTRK   K    +K+
Sbjct: 103 -YTTEADLRRVVAQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 161


>gi|209527120|ref|ZP_03275634.1| ribosomal protein S13 [Arthrospira maxima CS-328]
 gi|209492460|gb|EDZ92801.1| ribosomal protein S13 [Arthrospira maxima CS-328]
          Length = 127

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLTDADVAALRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +YQVEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|94676656|ref|YP_588798.1| 30S ribosomal protein S13 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|158706338|sp|Q1LTB6|RS13_BAUCH RecName: Full=30S ribosomal protein S13
 gi|94219806|gb|ABF13965.1| ribosomal protein S13p [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 118

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/117 (58%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V AL  I+GIG K SQ ICN   IP   ++  L E+++  +R  I
Sbjct: 1   MARIAGINIPDHKHTVIALTSIYGIGIKRSQYICNATGIPQNTKLSTLSETQIDTLRDVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Q + +EGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  TQ-FTIEGDLRREVTLNIKRLIDLGTYRGLRHRRSLPVRGQRTKTNARTRKGPRKPI 116


>gi|160871560|ref|ZP_02061692.1| ribosomal protein S13p/S18e [Rickettsiella grylli]
 gi|159120359|gb|EDP45697.1| ribosomal protein S13p/S18e [Rickettsiella grylli]
          Length = 119

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/117 (60%), Positives = 84/117 (71%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K VV  L  I+G+G   +  IC  L I PE +V  L+E ++  IRQ I
Sbjct: 1   MARIAGVNIPINKHVVIGLTAIYGVGRSRALKICKGLNISPETKVKDLLEKQLDAIRQKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
              Y++EGDLRR V+++IKRLMDLGCYRG+RHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  IT-YKIEGDLRREVSISIKRLMDLGCYRGIRHRRGLPVRGQRTRTNARTRKGPRKMI 116


>gi|186684488|ref|YP_001867684.1| 30S ribosomal protein S13 [Nostoc punctiforme PCC 73102]
 gi|226712769|sp|B2ITN3|RS13_NOSP7 RecName: Full=30S ribosomal protein S13
 gi|186466940|gb|ACC82741.1| ribosomal protein S13 [Nostoc punctiforme PCC 73102]
          Length = 126

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   +Q+I     + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRAQEIIAATGVNPDTRVKDLSDADVTALRGEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  ++NIKRL+D+G YRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ESNYQVEGDLRRLESLNIKRLVDIGTYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|284053324|ref|ZP_06383534.1| 30S ribosomal protein S13 [Arthrospira platensis str. Paraca]
 gi|291567806|dbj|BAI90078.1| 30S ribosomal protein S13 [Arthrospira platensis NIES-39]
          Length = 127

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L +++V  +R  I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILAETGVNPDTRVKDLSDADVAALRSVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +YQVEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QTNYQVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|315127934|ref|YP_004069937.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913]
 gi|315016448|gb|ADT69786.1| 30S ribosomal protein S13 [Pseudoalteromonas sp. SM9913]
          Length = 118

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+N+P  K  V  L  I+GIG   S+ I     I    ++ +L +  +  +R+A+
Sbjct: 1   MARIAGINVPDHKHAVIGLTAIYGIGKTRSKAILEATGIAETTKIGELSDETLDVLREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRLMDLGC+RGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YTVEGDLRREVTLNIKRLMDLGCFRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|325916508|ref|ZP_08178777.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937]
 gi|325537297|gb|EGD09024.1| SSU ribosomal protein S13P [Xanthomonas vesicatoria ATCC 35937]
          Length = 134

 Score =  158 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 17  MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 76

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 77  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 132


>gi|193216737|ref|YP_001999979.1| 30S ribosomal protein S13 [Mycoplasma arthritidis 158L3-1]
 gi|226712764|sp|B3PMM3|RS13_MYCA5 RecName: Full=30S ribosomal protein S13
 gi|193002060|gb|ACF07275.1| ribosomal protein S13 [Mycoplasma arthritidis 158L3-1]
          Length = 122

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  V IP  KR V +L YI GIG   +  I     +   ++V  L E E+ +IR+  
Sbjct: 1   MARVLNVEIPNKKRAVISLTYIFGIGKTLASQILKDANVDENKKVESLSEEELTRIREE- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKKYVTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQCTQKNARTRKGPRKTIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|37912967|gb|AAR05299.1| ribosomal protein S13 [uncultured marine gamma proteobacterium
           EB000-45B06]
 gi|40063198|gb|AAR38035.1| ribosomal protein S13 [uncultured marine bacterium 562]
          Length = 119

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/116 (58%), Positives = 81/116 (69%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V  +L +I GIG K++QDIC +L I   R++  L E EV  +R AI
Sbjct: 1   MARIAGVNIPENKHVEISLTHIFGIGRKTAQDICKELKIDYTRKISDLTEDEVENLRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            + + VEGDLRR ++ NIKRLMDLG YRG+RHRR LP RGQ T  NARTRK   K 
Sbjct: 61  GK-FVVEGDLRRNISTNIKRLMDLGSYRGIRHRRKLPTRGQNTKNNARTRKGAKKP 115


>gi|119484811|ref|ZP_01619293.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106]
 gi|119457629|gb|EAW38753.1| 30S ribosomal protein S13 [Lyngbya sp. PCC 8106]
          Length = 127

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I  +  + P+ RV  L ++EV  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLSRSKEILKETGVNPDTRVKDLSDAEVAALRTLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +  YQVEGDLRR  AMNIKRLMD+G YRG RHR GLPVRGQRT TNARTR+   +    R
Sbjct: 61  QGQYQVEGDLRRWEAMNIKRLMDIGTYRGRRHRMGLPVRGQRTRTNARTRRGARRTVAGR 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300867113|ref|ZP_07111779.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506]
 gi|300334868|emb|CBN56945.1| 30S ribosomal protein S13 [Oscillatoria sp. PCC 6506]
          Length = 127

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/122 (54%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S +I +   + P+ RV  L +++V  +R  +
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSHEILSATGVNPDTRVKDLSDADVTALRGEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQVEGDLRR  +MNIKRLMD+G YRG RHR GLPVRGQRT TNARTR+   +    +
Sbjct: 61  ETNYQVEGDLRRLESMNIKRLMDIGTYRGRRHRLGLPVRGQRTRTNARTRRGVRRTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|282899973|ref|ZP_06307934.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505]
 gi|281195243|gb|EFA70179.1| Ribosomal protein S13 [Cylindrospermopsis raciborskii CS-505]
          Length = 145

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/121 (57%), Positives = 87/121 (71%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGV++PR KRV   L YI+GIG + SQDI     + P+ RV  L ++++  +R  IE
Sbjct: 21  ARIAGVDLPRDKRVEIGLTYIYGIGLRRSQDILAATDVNPDTRVKDLTDADLAALRAEIE 80

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            +YQVEGDLRR  AMNIKRL+D+GCYRG RHR GLPVRGQRT TNARTR+   +    +K
Sbjct: 81  SNYQVEGDLRRLEAMNIKRLVDIGCYRGRRHRMGLPVRGQRTRTNARTRRGRRQTVAGKK 140

Query: 122 R 122
           +
Sbjct: 141 K 141


>gi|126658011|ref|ZP_01729163.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110]
 gi|126620649|gb|EAZ91366.1| 30S ribosomal protein S13 [Cyanothece sp. CCY0110]
          Length = 127

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   SQ+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRSQEILEETGVNPDTRVRDLSDEDVAKLRACI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQRT TN RTR+        +
Sbjct: 61  ENNYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNGRTRRGRRVTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|51209924|ref|YP_063588.1| ribosomal protein S13 [Gracilaria tenuistipitata var. liui]
 gi|68053118|sp|Q6B8X2|RR13_GRATL RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|50657678|gb|AAT79663.1| 30S ribosomal protein S13 [Gracilaria tenuistipitata var. liui]
          Length = 126

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/122 (44%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV++P+ KR+  +L YI+GIG   + +I  +L I    +  +L + +++ IRQ +
Sbjct: 1   MTRIVGVDLPKNKRIEISLTYIYGIGKSKAIEILEQLKINRNIKTKELKDEQIVLIRQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              YQ+EGDL+R  +MNIKRLM +  YRG RH+ GLP+RGQ T TNART++   K    +
Sbjct: 61  NNSYQIEGDLKRVESMNIKRLMTISSYRGKRHQLGLPLRGQNTRTNARTKRGIKKTMAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|269115049|ref|YP_003302812.1| 30S ribosomal protein S13 [Mycoplasma hominis]
 gi|268322674|emb|CAX37409.1| 30S ribosomal protein S13 [Mycoplasma hominis ATCC 23114]
          Length = 122

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  + IP  K+V  +L YI GIG   +++I     +  E+RV  L E E+ +IR   
Sbjct: 1   MARVLNIEIPNNKKVRISLTYIFGIGVSLAKEILKDANVDGEKRVKDLSEEELTRIRDE- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y  EGDLRR + +NIKRLM++  YRG+RHR+GLPVRGQ T  NARTRK   K    +
Sbjct: 60  AKKYTTEGDLRREINLNIKRLMEIKSYRGIRHRKGLPVRGQSTKKNARTRKGPRKTIAGK 119

Query: 121 K 121
           K
Sbjct: 120 K 120


>gi|113476557|ref|YP_722618.1| 30S ribosomal protein S13 [Trichodesmium erythraeum IMS101]
 gi|123056506|sp|Q110C9|RS13_TRIEI RecName: Full=30S ribosomal protein S13
 gi|110167605|gb|ABG52145.1| SSU ribosomal protein S13P [Trichodesmium erythraeum IMS101]
          Length = 127

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/101 (56%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG   SQ+I  +  + P+ RV  L +++V  IR  +
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGLSRSQEILAETDVNPDTRVKDLSDADVAAIRSEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           + +Y+VEGDLRR  AM+IKRLMD+G YRG RHR GLPVRGQ
Sbjct: 61  QNNYEVEGDLRRLEAMSIKRLMDIGTYRGRRHRMGLPVRGQ 101


>gi|15612281|ref|NP_223934.1| 30S ribosomal protein S13 [Helicobacter pylori J99]
 gi|7388139|sp|Q9ZJT2|RS13_HELPJ RecName: Full=30S ribosomal protein S13
 gi|4155844|gb|AAD06818.1| 30S RIBOSOMAL PROTEIN S13 [Helicobacter pylori J99]
          Length = 120

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 68/120 (56%), Positives = 86/120 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL   +GIG KSS++I   + I  ++RVH+L E EV  I + I
Sbjct: 1   MARIAGVDLPKKKRVEYALTCKNGIGLKSSREILEAVGISFDKRVHELSEDEVSSIAKKI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T  NARTRK   K   ++
Sbjct: 61  QQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTKNNARTRKGKKKTVGSK 120


>gi|91200690|emb|CAJ73741.1| strongly similar to 30S ribosomal protein S13 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 127

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/121 (49%), Positives = 73/121 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG +IP  KR+V AL Y +GIG   S+ I  +L I    R   L E ++  +   I
Sbjct: 1   MPRIAGTDIPADKRIVVALTYFYGIGGALSKKILRELNIDENVRTKDLHEDQLSILGAHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++Y VEG LRR    NI RL  + CYRG+RHR GLPVRGQRT TNARTRK   K    +
Sbjct: 61  GKNYNVEGQLRRQELQNISRLRSISCYRGMRHRIGLPVRGQRTKTNARTRKGRKKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|71278025|ref|YP_267373.1| 30S ribosomal protein S13 [Colwellia psychrerythraea 34H]
 gi|91207696|sp|Q488Z1|RS13_COLP3 RecName: Full=30S ribosomal protein S13
 gi|71143765|gb|AAZ24238.1| ribosomal protein S13 [Colwellia psychrerythraea 34H]
          Length = 118

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I+GIG   ++ IC    I    ++ +L E+++  +R  +
Sbjct: 1   MARIAGINIPDRKHAVIAITAIYGIGATRAKAICAATGIAESTKISELDEAKIDLLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           ++ + VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  DK-FTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|189485109|ref|YP_001956050.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226712801|sp|B1GZA7|RS13_UNCTG RecName: Full=30S ribosomal protein S13
 gi|170287068|dbj|BAG13589.1| 30S ribosomal protein S13 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 130

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 65/121 (53%), Positives = 84/121 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+AG+++P  KR+  AL YI+GIG   S +I  +L++ P +RV  L E EV +I   I
Sbjct: 1   MARVAGIDLPNNKRLDIALRYIYGIGPAISDEIIKELSLNPAKRVKDLTEEEVGRINNLI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VEGDLRR V  NIKRL+++  YRGLRHRR LPVRGQRT TNARTR+   K   A 
Sbjct: 61  TKNLKVEGDLRREVQSNIKRLIEIRSYRGLRHRRNLPVRGQRTKTNARTRRGKRKTVGAG 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|110598110|ref|ZP_01386388.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031]
 gi|110340242|gb|EAT58739.1| Ribosomal protein S13 [Chlorobium ferrooxidans DSM 13031]
          Length = 125

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 79/117 (67%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I P+R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRVSAENILQRAGIAPDRKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            Y+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K    
Sbjct: 62  SYKVEGQARGEQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTSTNARTRKGKRKTVAG 118


>gi|67923560|ref|ZP_00517033.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501]
 gi|67854586|gb|EAM49872.1| Ribosomal protein S13 [Crocosphaera watsonii WH 8501]
          Length = 127

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KRV   L Y++GIG   +Q+I  +  + P+ RV  L + +V ++R  I
Sbjct: 1   MARISGVDLPRDKRVEIGLTYLYGIGLSRAQEILAETGVNPDTRVRDLSDEDVAKLRGCI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E++YQ+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQRT TN RTR+        +
Sbjct: 61  EENYQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQRTRTNGRTRRGRKVTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|56751895|ref|YP_172596.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|81301020|ref|YP_401228.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 7942]
 gi|3122786|sp|O24708|RS13_SYNP6 RecName: Full=30S ribosomal protein S13
 gi|123556372|sp|Q31L28|RS13_SYNE7 RecName: Full=30S ribosomal protein S13
 gi|2446911|dbj|BAA22470.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|56686854|dbj|BAD80076.1| 30S ribosomal protein S13 [Synechococcus elongatus PCC 6301]
 gi|81169901|gb|ABB58241.1| SSU ribosomal protein S13P [Synechococcus elongatus PCC 7942]
          Length = 125

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR    L YI+GIG   +++I  K  + P+ R+  L +SEV  +RQ +
Sbjct: 1   MARIAGVDLPRDKRAEIGLTYIYGIGPTRAKEILAKTGVSPDTRIKDLNDSEVAALRQVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DYQVEGDLRR  AM+IKRLMD+G  RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 61  ENDYQVEGDLRRLEAMSIKRLMDIGTVRGRRHRAGLPVRGQRTRTNARTRRGARKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|45644718|gb|AAS73106.1| predicted ribosomal protein S13 [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 118

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/116 (56%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVNIP  K V  +L +I GIG K++Q+IC  L I   +++  L E E+  IR AI
Sbjct: 1   MARIAGVNIPENKHVEISLTHIFGIGRKTAQNICIDLKIDYTKKISDLSEEEIESIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +Y VEGDLRR ++ NIKRL DL  YRG+RHRR LP RGQ T  NARTRK   K 
Sbjct: 61  G-NYVVEGDLRRNISTNIKRLQDLASYRGIRHRRKLPTRGQNTKNNARTRKGPKKP 115


>gi|221105230|ref|XP_002170878.1| PREDICTED: similar to ribosomal protein S13 [Hydra magnipapillata]
          Length = 124

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP+ KR V AL YI G+G   + ++  K  +  +++V    + E+  IR+A+
Sbjct: 1   MARIAGVDIPKNKRGVIALTYIFGMGRSRAIEVLEKAKVSQDKKVLDWNDDEIGAIREAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              +++EG+LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SS-FKIEGELRSEITLNIKRLMDIGCQRGIRHRAGLPLRGQRTKNNSRTRKGKRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|313836057|gb|EFS73771.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA2]
 gi|314929593|gb|EFS93424.1| 30S ribosomal protein S13 [Propionibacterium acnes HL044PA1]
 gi|314970520|gb|EFT14618.1| 30S ribosomal protein S13 [Propionibacterium acnes HL037PA3]
 gi|328906198|gb|EGG25973.1| 30S ribosomal protein S13 [Propionibacterium sp. P08]
          Length = 123

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/110 (51%), Positives = 77/110 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI+GIG   + +      I  + RVH+L + +++ +R  I
Sbjct: 1   MARLIGVDLPRDKRLEVALTYIYGIGRTRATETLKTTGISGDLRVHELTDDQLVALRDHI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E  Y VEGDLRR VA +I+R +++G Y+G RHR GLPVRGQRT TNARTR
Sbjct: 61  EASYHVEGDLRREVAADIRRKIEIGTYQGRRHRSGLPVRGQRTRTNARTR 110


>gi|85057777|ref|YP_456693.1| 30S ribosomal protein S13 [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518126|sp|Q2NIX9|RS13_AYWBP RecName: Full=30S ribosomal protein S13
 gi|84789882|gb|ABC65614.1| SSU ribosomal protein S13P [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 126

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 68/122 (55%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IP  KRVV AL YI+G+G K S  I N+L I    RV  L E ++  +R  I
Sbjct: 1   MARIAGIDIPSDKRVVIALTYIYGLGNKLSHKILNELKIDQNIRVKNLTEQQLSALRIEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y VEGDLRR V +NIKRLM++G YRGLRHR+GLPVRGQ+T  NA T K   K  +A 
Sbjct: 61  TK-YNVEGDLRREVTLNIKRLMEIGAYRGLRHRKGLPVRGQKTRNNAHTVKGKPKAAIAG 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|62184756|ref|YP_219541.1| 30S ribosomal protein S13 [Chlamydophila abortus S26/3]
 gi|329942430|ref|ZP_08291240.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
 gi|81313064|sp|Q5L701|RS13_CHLAB RecName: Full=30S ribosomal protein S13
 gi|62147823|emb|CAH63569.1| putative 30s ribosomal protein s13 [Chlamydophila abortus S26/3]
 gi|313847667|emb|CBY16655.1| putative 30s ribosomal protein s13 [Chlamydophila psittaci RD1]
 gi|325506969|gb|ADZ18607.1| 30S ribosomal protein S13 [Chlamydophila psittaci 6BC]
 gi|328815340|gb|EGF85328.1| ribosomal S13/S18 family protein [Chlamydophila psittaci Cal10]
 gi|328914304|gb|AEB55137.1| ribosomal protein S13p/S18e [Chlamydophila psittaci 6BC]
          Length = 122

 Score =  156 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  KL + PE R  +L E E+ ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAAELTEEEIGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|16329919|ref|NP_440647.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803]
 gi|2500458|sp|P73299|RS13_SYNY3 RecName: Full=30S ribosomal protein S13
 gi|1652405|dbj|BAA17327.1| 30S ribosomal protein S13 [Synechocystis sp. PCC 6803]
          Length = 127

 Score =  156 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 87/122 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV  AL Y++GIG   S +I +   + P+ RV  L + + +++R  I
Sbjct: 1   MARIAGVDLPRDKRVEIALTYLYGIGLSRSHEILDATGVSPDVRVKDLSDEDALKLRTYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y++EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQRT TNARTR+        +
Sbjct: 61  DENYEIEGDLRRWEAMNIKRLGDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|21230385|ref|NP_636302.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|21903472|sp|Q9Z3F0|RS13_XANCP RecName: Full=30S ribosomal protein S13
 gi|21111942|gb|AAM40226.1| 30S ribosomal protein S13 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
          Length = 118

 Score =  156 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+P  K V   L  I+GIG   S+ +C    +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR + + IKRLMDLGCYRGLRHRRG P+RGQRT TNARTRK   K  
Sbjct: 61  GK-YVVEGDLRREIGIAIKRLMDLGCYRGLRHRRGHPLRGQRTRTNARTRKGPRKAI 116


>gi|21672748|ref|NP_660815.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009164|sp|Q8K971|RS13_BUCAP RecName: Full=30S ribosomal protein S13
 gi|21623394|gb|AAM68026.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 118

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  + AL  I+GIG K S+ IC    I    ++  L E E+  +R+ +
Sbjct: 1   MARIAGINIPEHKHALIALTSIYGIGKKRSKIICFNANIAENSKISDLKEEEIELLRENV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y  EGDLRR   +NIKRL+DL CYRGLRHRR LPVRGQRT TNART K   K  
Sbjct: 61  AK-YVTEGDLRREKTLNIKRLIDLNCYRGLRHRRSLPVRGQRTKTNARTCKGPRKAI 116


>gi|189219453|ref|YP_001940094.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4]
 gi|226712760|sp|B3DVZ3|RS13_METI4 RecName: Full=30S ribosomal protein S13
 gi|189186311|gb|ACD83496.1| Ribosomal protein S13 [Methylacidiphilum infernorum V4]
          Length = 131

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/124 (50%), Positives = 82/124 (66%), Gaps = 2/124 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  K ++ AL  I+GIG   ++ IC +  + P+ R   L   ++ +I Q I
Sbjct: 1   MARILGVEIPGNKPLISALPVIYGIGRSRAKLICEQAELNPQMRAKDLTNQQINRIIQVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG-GV 118
           E++ + VEGDLRR +  NIKRL  + CYRG+RH RGLPVRGQRT TNARTRK   K  GV
Sbjct: 61  EENGFVVEGDLRREIQQNIKRLQSIRCYRGIRHIRGLPVRGQRTSTNARTRKGPRKTIGV 120

Query: 119 ARKR 122
            R++
Sbjct: 121 VRRK 124


>gi|327538950|gb|EGF25588.1| Ribosomal protein S13, bacterial-type [Rhodopirellula baltica WH47]
          Length = 123

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
            GV+IP  K++  +L Y++G+G   ++++C KL I P      + + +V +I   +E+DY
Sbjct: 1   MGVDIPNDKQIQYSLTYLYGLGLYRAREVCEKLGIDPTSPASDISDEDVGRIAALLERDY 60

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            VEG LRR V  NI R+ ++  YRG+RHR  LPVRGQRT TNARTRK   K    +K
Sbjct: 61  LVEGPLRRQVTQNISRMREIKSYRGIRHRVSLPVRGQRTKTNARTRKGPRKTVAGKK 117


>gi|194335469|ref|YP_002017263.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1]
 gi|226712772|sp|B4SBX1|RS13_PELPB RecName: Full=30S ribosomal protein S13
 gi|194307946|gb|ACF42646.1| ribosomal protein S13 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 125

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 61/114 (53%), Positives = 76/114 (66%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S++ I  +  I P R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGRASAESILQRAGIAPNRKISELNDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            Y+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K 
Sbjct: 62  QYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKT 115


>gi|291286336|ref|YP_003503152.1| 30S 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883496|gb|ADD67196.1| 30S ribosomal protein S13 [Denitrovibrio acetiphilus DSM 12809]
          Length = 122

 Score =  156 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 53/122 (43%), Positives = 78/122 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+I   K+V   L  I+G+G  +++ I   + +   +R+  L E ++  IR+ I
Sbjct: 1   MARIAGVDIQNNKKVEVGLTNIYGVGRATARLILADINVDLSKRIGDLSEQDISAIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +  VEGDLR+  A+NIKRLM++ CYRG RH+  LP RGQ+T +NARTR+        +
Sbjct: 61  EDNLTVEGDLRKETALNIKRLMEINCYRGSRHKMHLPCRGQKTRSNARTRRGLAGKRGIK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|239996315|ref|ZP_04716839.1| 30S ribosomal protein S13 [Alteromonas macleodii ATCC 27126]
 gi|332142184|ref|YP_004427922.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|226712686|sp|B4RT50|RS13_ALTMD RecName: Full=30S ribosomal protein S13
 gi|327552206|gb|AEA98924.1| 30S ribosomal protein S13 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 118

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 59/117 (50%), Positives = 81/117 (69%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I+G+G   ++ IC    +    ++ +L E+ + ++R  +
Sbjct: 1   MARIAGINIPEHKHAVIAIQAIYGVGPTRAKSICAGAGVAENTKIKELDEATIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|78189783|ref|YP_380121.1| 30S ribosomal protein S13 [Chlorobium chlorochromatii CaD3]
 gi|91207694|sp|Q3APJ7|RS13_CHLCH RecName: Full=30S ribosomal protein S13
 gi|78171982|gb|ABB29078.1| SSU ribosomal protein S13P [Chlorobium chlorochromatii CaD3]
          Length = 125

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/114 (51%), Positives = 78/114 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+AGVN+P  K  V AL +++GIG  S+++I  K  I  ++++ +L + E   IR+ I +
Sbjct: 2   RLAGVNLPLNKHAVIALTHVYGIGRTSAENILRKAGIAYDKKISELSDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           +Y+VEG  R      IKRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K 
Sbjct: 62  EYKVEGQARGEQQTAIKRLMDIGCYRGLRHRRSLPVRGQRTRTNARTRKGKRKT 115


>gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172]
 gi|227236500|gb|EEI86515.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172]
          Length = 114

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+++PR KR    L YI+G+G  ++ +I     I P+ ++  L E E+ +IR+ +
Sbjct: 1   MPRIAGIDLPREKRAEIGLTYIYGVGRATANEILKNTGINPDTKMKDLTEDELGKIREQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           +  Y +EGDLRR  ++NIK L + G YRGLRH+ GLPVRGQ T  NARTRK
Sbjct: 61  D-HYTIEGDLRRETSLNIKALRENGSYRGLRHKNGLPVRGQNTKNNARTRK 110


>gi|11467401|ref|NP_043258.1| ribosomal protein S13 [Cyanophora paradoxa]
 gi|1350871|sp|P48137|RR13_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S13
 gi|1016202|gb|AAA81289.1| ribosomal protein S13 [Cyanophora paradoxa]
          Length = 126

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 69/122 (56%), Positives = 89/122 (72%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   S++I +K+ + P+ RV  L ++ + Q+R+ I
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSKEILSKIELDPDTRVRDLPDNAIAQLREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E DYQVEGDLRR  +MNIKRL D+GCYRG RHR  LPVRGQRT TNARTR+   +    +
Sbjct: 61  ETDYQVEGDLRRFESMNIKRLADIGCYRGRRHRLNLPVRGQRTRTNARTRRGARQTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|307128726|ref|YP_003880756.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI]
 gi|306483188|gb|ADM90058.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri CARI]
          Length = 126

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/112 (45%), Positives = 74/112 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA I+G++IP  KR + AL YI GIG  +S+ I     I    +V    +  + QIR+ I
Sbjct: 1   MAIISGIDIPNNKRGLIALTYIFGIGLSTSKKIFKNTGIDENLKVSNWSDDNLNQIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             + ++EG+L+  + ++IKR+M++GCYRG+RHR GLPVRGQ+T  N RTRK 
Sbjct: 61  SDNLKIEGELKFEIQLDIKRMMEIGCYRGIRHRIGLPVRGQKTKNNCRTRKG 112


>gi|255348886|ref|ZP_05380893.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70]
 gi|255503426|ref|ZP_05381816.1| 30S ribosomal protein S13 [Chlamydia trachomatis 70s]
 gi|255507104|ref|ZP_05382743.1| 30S ribosomal protein S13 [Chlamydia trachomatis D(s)2923]
 gi|289525554|emb|CBJ15032.1| SSU ribosomal protein S13P [Chlamydia trachomatis Sweden2]
 gi|296435114|gb|ADH17292.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/150]
 gi|296438834|gb|ADH20987.1| 30S ribosomal protein S13 [Chlamydia trachomatis E/11023]
          Length = 122

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKCKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|88608326|ref|YP_506178.1| 30S ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama]
 gi|123492152|sp|Q2GEB8|RS13_NEOSM RecName: Full=30S ribosomal protein S13
 gi|88600495|gb|ABD45963.1| ribosomal protein S13 [Neorickettsia sennetsu str. Miyayama]
          Length = 123

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/120 (47%), Positives = 81/120 (67%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R  GVN+P  K VV AL Y++GIG  +++ IC+ LAI    ++  L + ++  I   I+ 
Sbjct: 2   RFLGVNLPDNKAVVVALTYLYGIGLPTARKICSSLAIDGSAKLPDLEQEQLNSIMAYIKN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           D   EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK   +  +A K+
Sbjct: 62  DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVPIAAKK 121


>gi|225459459|ref|XP_002285833.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302141873|emb|CBI19076.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP +KRV  +L YIHGIG   S+ I   L +   +    L E E+I +R  + 
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSRSKQILCDLGM-ENKITKDLSEEELITLRDEVS 105

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+ I+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 106 K-YMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKK 164

Query: 122 R 122
           +
Sbjct: 165 K 165


>gi|319760351|ref|YP_004124289.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF]
 gi|318039065|gb|ADV33615.1| 30S ribosomal protein S13 [Candidatus Blochmannia vafer str. BVAF]
          Length = 119

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GVN+P  K  V AL  I+GIG   +++IC  + I    R++QL E  + ++R  I
Sbjct: 1   MVRIVGVNVPDRKHAVIALMSIYGIGKSLAKEICLNVGIDLHVRINQLSEENIDKLRDEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + Y +EGDLRR + +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK   K
Sbjct: 61  SK-YVIEGDLRREINLNIKRLIDLGTYRGLRHRRSLPVRGQRTRTNARTRKGPKK 114


>gi|323144986|ref|ZP_08079546.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066]
 gi|322415265|gb|EFY06039.1| 30S ribosomal protein S13 [Succinatimonas hippei YIT 12066]
          Length = 128

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/116 (52%), Positives = 79/116 (68%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAG+N+P  K  V AL  ++GIG   +++I     +    +   L E+ V +IR+ + 
Sbjct: 12  ARIAGINVPDHKIAVIALQSVYGIGPTRARNILAAAGVAESAKFKDLDEASVDKIREEVA 71

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + Y VEGDLRR ++MNIKRL+DLG YRG+RHRRGLPVRGQRT TNARTRK   K  
Sbjct: 72  K-YTVEGDLRREISMNIKRLVDLGSYRGIRHRRGLPVRGQRTKTNARTRKGPRKSI 126


>gi|330444132|ref|YP_004377118.1| 30S ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
 gi|328807242|gb|AEB41415.1| ribosomal protein S13p/S18e [Chlamydophila pecorum E58]
          Length = 122

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIERLNLDPEARTSELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSEYVVEGDLRRRVQSDIKRLIAIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|32423693|gb|AAP81236.1| ribosomal protein S13 [Candidatus Portiera aleyrodidarum]
          Length = 116

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG NIP  K+V  +L YI+GIG   +  IC ++ I    +V  L   ++ ++R+ +
Sbjct: 1   MARIAGRNIPDNKQVWVSLTYIYGIGKYRANSICKRIGIDRNVKVRDLNSIQLDKVRKQL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEG+LRR V++NIKRLMDLGCYRGLRH+R LPVRGQRT TNART K   KG 
Sbjct: 61  CK-FVVEGELRREVSVNIKRLMDLGCYRGLRHKRCLPVRGQRTKTNARTCKNINKGI 116


>gi|254796668|ref|YP_003081504.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois]
 gi|254589916|gb|ACT69278.1| ribosomal protein S13p/S18e [Neorickettsia risticii str. Illinois]
          Length = 123

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/120 (47%), Positives = 81/120 (67%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R  GVN+P  K VV AL Y++GIG  +++ IC+ LAI    ++  L + ++  I   I+ 
Sbjct: 2   RFLGVNLPDNKAVVVALTYVYGIGLPTARKICSSLAIDGSAKLPDLGQEQLNSIMAYIKN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           D   EG+LR++VA +IK L+D+ CYRG+RHR+ LPVRGQRT TNARTRK   +  +A K+
Sbjct: 62  DIPFEGELRKSVAFSIKHLVDIKCYRGVRHRKNLPVRGQRTRTNARTRKGKVRVPIAAKK 121


>gi|149197864|ref|ZP_01874913.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
 gi|149139085|gb|EDM27489.1| 30S ribosomal protein S13 [Lentisphaera araneosa HTCC2155]
          Length = 130

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/119 (45%), Positives = 80/119 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K++  +L YI+GIG  ++ +I  K  I P++R  +L ++++  I + +
Sbjct: 1   MPRIMGVDIPTNKKIKISLTYIYGIGSATALEILEKAKIDPDKRASELNDADISAIVKLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           +  Y+VEGDLRR +A++++RL  + CYRG RH+  LP RGQRT TNARTRK   K   A
Sbjct: 61  DSSYEVEGDLRRQLALSVRRLQAVNCYRGRRHKHSLPCRGQRTKTNARTRKGKKKTIGA 119


>gi|15835410|ref|NP_297169.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
 gi|270285590|ref|ZP_06194984.1| 30S ribosomal protein S13 [Chlamydia muridarum Nigg]
 gi|270289600|ref|ZP_06195902.1| 30S ribosomal protein S13 [Chlamydia muridarum Weiss]
 gi|301336986|ref|ZP_07225188.1| 30S ribosomal protein S13 [Chlamydia muridarum MopnTet14]
 gi|14195202|sp|Q9PJN2|RS13_CHLMU RecName: Full=30S ribosomal protein S13
 gi|7190824|gb|AAF39599.1| ribosomal protein S13 [Chlamydia muridarum Nigg]
          Length = 122

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|15605238|ref|NP_220024.1| 30S ribosomal protein S13 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789246|ref|YP_328332.1| 30S ribosomal protein S13 [Chlamydia trachomatis A/HAR-13]
 gi|237802938|ref|YP_002888132.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804860|ref|YP_002889014.1| 30S ribosomal protein S13 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311327|ref|ZP_05353897.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276]
 gi|255317628|ref|ZP_05358874.1| 30S ribosomal protein S13 [Chlamydia trachomatis 6276s]
 gi|91207695|sp|Q3KLI8|RS13_CHLTA RecName: Full=30S ribosomal protein S13
 gi|290463296|sp|P0CE04|RS13_CHLTR RecName: Full=30S ribosomal protein S13
 gi|3328946|gb|AAC68110.1| S13 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
 gi|76167776|gb|AAX50784.1| SSU ribosomal protein S13P [Chlamydia trachomatis A/HAR-13]
 gi|231273160|emb|CAX10073.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274172|emb|CAX10966.1| SSU ribosomal protein S13P [Chlamydia trachomatis B/Jali20/OT]
 gi|296436042|gb|ADH18216.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9768]
 gi|296436970|gb|ADH19140.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11222]
 gi|296437903|gb|ADH20064.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/11074]
 gi|297140403|gb|ADH97161.1| 30S ribosomal protein S13 [Chlamydia trachomatis G/9301]
 gi|297748639|gb|ADI51185.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-EC]
 gi|297749519|gb|ADI52197.1| SSU ribosomal protein S13P [Chlamydia trachomatis D-LC]
          Length = 122

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|281357930|ref|ZP_06244415.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548]
 gi|281315588|gb|EFA99616.1| 30S ribosomal protein S13 [Victivallis vadensis ATCC BAA-548]
          Length = 131

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/112 (50%), Positives = 76/112 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  KRV  +L Y++G+G   + +I  K+ I P+ +   L   ++  I + +
Sbjct: 1   MPRIIGVDIPGNKRVEFSLRYLYGVGPAKALEIIQKVGIDPDLKAKDLTPDQIGAITKIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + D  VEGDLRRT+A +I+RL  + CYRG+RHRR LPVRGQRT TNARTRK 
Sbjct: 61  QDDLLVEGDLRRTLAADIRRLQQINCYRGIRHRRSLPVRGQRTKTNARTRKG 112


>gi|29839880|ref|NP_828986.1| 30S ribosomal protein S13 [Chlamydophila caviae GPIC]
 gi|89898701|ref|YP_515811.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
 gi|32363224|sp|P59752|RS13_CHLCV RecName: Full=30S ribosomal protein S13
 gi|123482768|sp|Q252X2|RS13_CHLFF RecName: Full=30S ribosomal protein S13
 gi|29834227|gb|AAP04864.1| ribosomal protein S13 [Chlamydophila caviae GPIC]
 gi|89332073|dbj|BAE81666.1| 30S ribosomal protein S13 [Chlamydophila felis Fe/C-56]
          Length = 122

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/122 (47%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  KL + PE R  +L E E+ ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSEEIIAKLQLNPEARAVELTEEEIGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSEYVVEGDLRRRVQSDIKRLISIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|194334837|ref|YP_002016697.1| 30S ribosomal protein S13 [Prosthecochloris aestuarii DSM 271]
 gi|226712776|sp|B4S5A4|RS13_PROA2 RecName: Full=30S ribosomal protein S13
 gi|194312655|gb|ACF47050.1| ribosomal protein S13 [Prosthecochloris aestuarii DSM 271]
          Length = 125

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/114 (50%), Positives = 79/114 (69%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +++GIG  S+++I  +  I P +++ ++ + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHVYGIGKTSARNILERAGIDPAKKIAEMSDEEAHAIREIIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           +Y+VEG  R    + +KRLMD+GCYRGLRHRR LPVRGQRT TNARTRK   K 
Sbjct: 62  EYKVEGQARGLQQLAVKRLMDIGCYRGLRHRRSLPVRGQRTQTNARTRKGKRKT 115


>gi|166154724|ref|YP_001654842.1| 30S ribosomal protein S13 [Chlamydia trachomatis 434/Bu]
 gi|166155599|ref|YP_001653854.1| 30S ribosomal protein S13 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335998|ref|ZP_07224242.1| 30S ribosomal protein S13 [Chlamydia trachomatis L2tet1]
 gi|226712714|sp|B0B883|RS13_CHLT2 RecName: Full=30S ribosomal protein S13
 gi|226712716|sp|B0BCE8|RS13_CHLTB RecName: Full=30S ribosomal protein S13
 gi|620027|gb|AAA74987.1| ribosomal protein S13 [Chlamydia trachomatis]
 gi|165930712|emb|CAP04209.1| SSU ribosomal protein S13P [Chlamydia trachomatis 434/Bu]
 gi|165931587|emb|CAP07163.1| SSU ribosomal protein S13P [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 122

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARAAELTEEEVGRLNALL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSDYVVEGDLRRRVQSDIKRLITIHAYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTIAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|254412272|ref|ZP_05026047.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420]
 gi|196181238|gb|EDX76227.1| ribosomal protein S13p/S18e [Microcoleus chthonoplastes PCC 7420]
          Length = 127

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 74/101 (73%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIA V++PR KR+   L YI+GIG   S++I  K  + P+ RV  L +++V  +R  +
Sbjct: 1   MARIASVDLPRDKRIEIGLTYIYGIGLSRSKEILAKTGVNPDIRVKDLSDADVATLRSVV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E DYQVEGDLRR  AMNIKRL+D+G YRG RHR+GLPVRGQ
Sbjct: 61  EGDYQVEGDLRRWEAMNIKRLVDIGTYRGRRHRQGLPVRGQ 101


>gi|302850780|ref|XP_002956916.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
           nagariensis]
 gi|300257797|gb|EFJ42041.1| plastid/chloroplast ribosomal protein S13 [Volvox carteri f.
           nagariensis]
          Length = 137

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/120 (49%), Positives = 79/120 (65%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI  V IP +KR+  +L YI+GIG  ++Q I     +   ++ ++L E EV ++RQ +++
Sbjct: 17  RINNVEIPNSKRIEVSLQYIYGIGQTTAQTILRDTGV-ENKKTYELNEEEVNKLRQEVDK 75

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y  E DLRR V+ NIKRL D+GCYRG RH  GLPVRGQRT TNARTRK   K    +K+
Sbjct: 76  -YTTEADLRRIVSQNIKRLKDIGCYRGRRHIMGLPVRGQRTKTNARTRKGKAKTVANKKK 134


>gi|325108637|ref|YP_004269705.1| 30S ribosomal protein S13P [Planctomyces brasiliensis DSM 5305]
 gi|324968905|gb|ADY59683.1| SSU ribosomal protein S13P [Planctomyces brasiliensis DSM 5305]
          Length = 128

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/121 (43%), Positives = 75/121 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K    +L Y++GIG  ++ +IC +L I P  +   + +  + Q+   +
Sbjct: 1   MPRVQGVDIPNNKAAYISLTYLYGIGRHTAIEICRRLQIEPTMKAKDIGDDTLAQLNNLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + DY +EG LRR    +I RL ++  YRG+RHRRGLPVRGQRT TNARTRK   K    +
Sbjct: 61  DTDYVIEGQLRRQTQQHIARLREIQSYRGIRHRRGLPVRGQRTITNARTRKGVRKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|298243944|ref|ZP_06967751.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963]
 gi|297556998|gb|EFH90862.1| 30S ribosomal protein S13 [Ktedonobacter racemifer DSM 44963]
          Length = 126

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/101 (61%), Positives = 78/101 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +LCYI+GIG  +SQ I  K  I P+ RV  L E EV ++R+ I
Sbjct: 1   MARIAGVDIPREKRVEISLCYIYGIGLTTSQKILEKTRINPDTRVKDLTEEEVNRLREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           +++++VEGDLRR +  NIKRL+D+GCYRGLRHRR LPV GQ
Sbjct: 61  DREHKVEGDLRREIQTNIKRLIDIGCYRGLRHRRNLPVHGQ 101


>gi|259506744|ref|ZP_05749644.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
 gi|259165685|gb|EEW50239.1| 30S ribosomal protein S13 [Corynebacterium efficiens YS-314]
          Length = 108

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 49/108 (45%), Positives = 71/108 (65%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI+GIG   ++ +  +  + P+ R   L + ++  +R  IE  ++VEGDLRR V
Sbjct: 1   MEIALTYIYGIGPARAKQLLEETGVSPDLRTDNLTDEQIASLRDVIEATWKVEGDLRREV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +K+
Sbjct: 61  QADIRRKIEIGSYQGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108


>gi|212704606|ref|ZP_03312734.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098]
 gi|212672005|gb|EEB32488.1| hypothetical protein DESPIG_02668 [Desulfovibrio piger ATCC 29098]
          Length = 108

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/106 (56%), Positives = 78/106 (73%)

Query: 17  RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAM 76
            AL YI+GIG  ++  I +   +  ER +  L   EV +IR+ +EQ+Y+VEGDLRR ++ 
Sbjct: 3   IALTYIYGIGRATALQILSTTGVNWERNIDDLSADEVNEIRKELEQNYKVEGDLRREIST 62

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           NIKRLMD+GC+RGLRHRRGLPV GQRTHTNARTRK   +G V +K+
Sbjct: 63  NIKRLMDIGCFRGLRHRRGLPVHGQRTHTNARTRKGPRRGVVGKKK 108


>gi|299830397|ref|YP_003734612.1| ribosomal protein S13 [Kryptoperidinium foliaceum]
 gi|297385099|gb|ADI40397.1| ribosomal protein S13 [Kryptoperidinium foliaceum]
          Length = 123

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++  AL YIHGIG  +++ I     I  E RV+ L   + + +RQ I
Sbjct: 1   MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKQIIETADIDSEVRVYDLTTEQTVALRQTI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+ D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  EESDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|87306333|ref|ZP_01088480.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
 gi|87290512|gb|EAQ82399.1| 30S ribosomal protein S13 [Blastopirellula marina DSM 3645]
          Length = 123

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/117 (48%), Positives = 80/117 (68%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
            GV+IP  K    +L Y++G+G ++++++C K+ I  ER+  +L E E+ +I   +E +Y
Sbjct: 1   MGVDIPNDKPTWISLTYLYGVGPRTARELCVKVGISQERKAGELHEDELSRIAGLLETEY 60

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
            VEG LRR +A NI+RL  + CYRG+RHRRGLPVRGQRT TNARTRK   K    +K
Sbjct: 61  TVEGPLRRQIAQNIQRLNRIVCYRGMRHRRGLPVRGQRTRTNARTRKGPKKTVAGKK 117


>gi|189501187|ref|YP_001960657.1| 30S ribosomal protein S13 [Chlorobium phaeobacteroides BS1]
 gi|226712713|sp|B3EP37|RS13_CHLPB RecName: Full=30S ribosomal protein S13
 gi|189496628|gb|ACE05176.1| ribosomal protein S13 [Chlorobium phaeobacteroides BS1]
          Length = 125

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/114 (52%), Positives = 78/114 (68%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RIAGVN+P  K  V AL +I+GIG  S+++I  ++ I P R++ +L + E   IR+ I +
Sbjct: 2   RIAGVNLPLNKHAVIALTHIYGIGKTSAKNILERVGIDPARKISELNDEEAHSIREVIAE 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           DY VEG  R    +++KRLMD+GCYRGLRHRR LP RGQ T TNARTRK   K 
Sbjct: 62  DYIVEGQARGEQQLSVKRLMDIGCYRGLRHRRSLPARGQNTQTNARTRKGRRKT 115


>gi|15617096|ref|NP_240309.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681848|ref|YP_002468234.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682403|ref|YP_002468787.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471553|ref|ZP_05635552.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11387083|sp|P57569|RS13_BUCAI RecName: Full=30S ribosomal protein S13
 gi|254811134|sp|B8D9S5|RS13_BUCA5 RecName: Full=30S ribosomal protein S13
 gi|254811135|sp|B8D827|RS13_BUCAT RecName: Full=30S ribosomal protein S13
 gi|25294711|pir||C84988 30S ribosomal protein S13 [imported] - Buchnera sp. (strain APS)
 gi|10039161|dbj|BAB13195.1| 30S ribosomal protein S13 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622136|gb|ACL30292.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624691|gb|ACL30846.1| 30S ribosomal protein S13 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086224|gb|ADP66306.1| 30S ribosomal protein S13 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086801|gb|ADP66882.1| 30S ribosomal protein S13 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087388|gb|ADP67468.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087885|gb|ADP67964.1| 30S ribosomal protein S13 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 118

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  + AL  I+GIG K S+ IC+   IP   ++  L E ++  +R  +
Sbjct: 1   MARIAGINIPENKHTLIALTAIYGIGKKRSKFICSIANIPEHSKIVDLNEEQIDLLRTHV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR   +NIKRL+DL CYRGLRHRR LPV GQRT TNART K   K  
Sbjct: 61  AK-YVIEGDLRRERTLNIKRLIDLSCYRGLRHRRSLPVHGQRTKTNARTCKGPRKPI 116


>gi|227505243|ref|ZP_03935292.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940]
 gi|227198142|gb|EEI78190.1| ribosomal protein S13 [Corynebacterium striatum ATCC 6940]
          Length = 108

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/108 (47%), Positives = 73/108 (67%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI+GIG   ++++  K  I P+ R   L + ++  +R  IE  ++VEGDLRR V
Sbjct: 1   MEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLDDDQLSALRDVIEATWKVEGDLRRQV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +I+R +++GCY+G+RHRRGLPVRGQRT TNARTRK   K    +K+
Sbjct: 61  QADIRRKIEIGCYQGIRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108


>gi|225165490|ref|ZP_03727316.1| ribosomal protein S13 [Opitutaceae bacterium TAV2]
 gi|224800267|gb|EEG18671.1| ribosomal protein S13 [Opitutaceae bacterium TAV2]
          Length = 125

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV+IP  K+V  +L YI+GIG   +  +  +  + P+ R   L E ++ +I Q I
Sbjct: 1   MPRLLGVDIPAKKKVSYSLRYIYGIGPVRADQVVKEAELNPDMRAQDLTEEQLNKILQVI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
            E  + VEGDLRR+   ++KRL  +GCYRG+RHRR LPVRGQRT TNARTRK   +    
Sbjct: 61  TEHKWTVEGDLRRSHTADLKRLQAIGCYRGIRHRRSLPVRGQRTSTNARTRKGPRRTVGV 120

Query: 120 RK 121
            K
Sbjct: 121 TK 122


>gi|71842330|ref|YP_277418.1| ribosomal protein S13 [Emiliania huxleyi]
 gi|91207764|sp|Q4G349|RR13_EMIHU RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|60101573|gb|AAX13917.1| ribosomal protein S13 [Emiliania huxleyi]
          Length = 124

 Score =  154 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/112 (49%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+GV++PR KR+   L  I GIG  S+  I     + P+ R   L + +V  +R  I
Sbjct: 1   MVRISGVDLPRNKRIQIGLTSIFGIGNTSADKILTTANLSPDIRCSDLTDEQVSSLRTII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           ++ YQ EGDLRR  ++NIKRL ++G   G RHR  LPVRGQRT TNARTRK 
Sbjct: 61  DESYQTEGDLRRVYSLNIKRLTEIGSAAGRRHRVNLPVRGQRTRTNARTRKG 112


>gi|15618538|ref|NP_224824.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae CWL029]
 gi|15836160|ref|NP_300684.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae J138]
 gi|16752412|ref|NP_444671.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae AR39]
 gi|33241985|ref|NP_876926.1| 30S ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
 gi|6831656|sp|Q9Z7S6|RS13_CHLPN RecName: Full=30S ribosomal protein S13
 gi|4376926|gb|AAD18767.1| S13 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
 gi|7189053|gb|AAF38002.1| ribosomal protein S13 [Chlamydophila pneumoniae AR39]
 gi|8979000|dbj|BAA98835.1| S13 ribosomal protein [Chlamydophila pneumoniae J138]
 gi|33236495|gb|AAP98583.1| ribosomal protein S13 [Chlamydophila pneumoniae TW-183]
 gi|269302412|gb|ACZ32512.1| ribosomal protein S13 [Chlamydophila pneumoniae LPCoLN]
          Length = 122

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 79/122 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI G++IP  K++  +L YI+GIG   S +I  KL + PE R  +L E EV ++   +
Sbjct: 1   MPRIIGIDIPAKKKLKISLTYIYGIGSARSDEIIKKLKLDPEARASELTEEEVGRLNSLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           + +Y VEGDLRR V  +IKRL+ +  YRG RHR  LPVRGQRT TN+RTRK   K    +
Sbjct: 61  QSEYTVEGDLRRRVQSDIKRLIAIHSYRGQRHRLSLPVRGQRTKTNSRTRKGKRKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|187734946|ref|YP_001877058.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
 gi|226712685|sp|B2UNG5|RS13_AKKM8 RecName: Full=30S ribosomal protein S13
 gi|187424998|gb|ACD04277.1| ribosomal protein S13 [Akkermansia muciniphila ATCC BAA-835]
          Length = 125

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 3/125 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ G  IP  KR+  +L YI+GIG  +S+ I  +  I P+ R  QL + ++ +I Q I
Sbjct: 1   MARLFGTEIPNEKRIEASLPYIYGIGRSTSKRILEQAGINPDIRTGQLTDEQLTKIVQVI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK--GG 117
             D   +EGDLRR     +KRL  + CYRG RHRRGLPVRGQRT TNARTRK   K  G 
Sbjct: 61  TTDGILIEGDLRREKQSILKRLTSINCYRGQRHRRGLPVRGQRTRTNARTRKGKKKTVGA 120

Query: 118 VARKR 122
            A+K+
Sbjct: 121 QAKKK 125


>gi|223936406|ref|ZP_03628318.1| ribosomal protein S13 [bacterium Ellin514]
 gi|223894924|gb|EEF61373.1| ribosomal protein S13 [bacterium Ellin514]
          Length = 131

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI GV IP  KR+  +L YI+GIG  ++++I     I P  R   L E ++ QI  AI
Sbjct: 1   MARIIGVEIPGEKRIDISLRYIYGIGPVNAKEILENAKIDPSIRAKDLSEQQMSQIVHAI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           ++  Y +EGDLRR + MN+KRL  + CYRG+RH R LPVRGQRT TNARTRK   K  
Sbjct: 61  QEGKYVIEGDLRRELGMNLKRLQGIKCYRGVRHLRSLPVRGQRTQTNARTRKGPRKTV 118


>gi|170077664|ref|YP_001734302.1| ribosomal protein S13 [Synechococcus sp. PCC 7002]
 gi|226712794|sp|B1XJI6|RS13_SYNP2 RecName: Full=30S ribosomal protein S13
 gi|169885333|gb|ACA99046.1| ribosomal protein S13 [Synechococcus sp. PCC 7002]
          Length = 125

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL Y++GIG   +Q+I     + P+ RV  L + + +++R  +
Sbjct: 1   MARIAGVDLPRDKRIEIALTYVYGIGLSRAQEIIANTGVNPDTRVRDLSDEDALKLRSYV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +YQVEGDLRR  +MNIKRL+D+G YRG RHR+GLPVRGQRT TNARTR+        +
Sbjct: 61  TDNYQVEGDLRRLESMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRVTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|22297647|ref|NP_680894.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1]
 gi|32363319|sp|Q8DML1|RS13_THEEB RecName: Full=30S ribosomal protein S13
 gi|22293824|dbj|BAC07656.1| 30S ribosomal protein S13 [Thermosynechococcus elongatus BP-1]
          Length = 126

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/101 (59%), Positives = 76/101 (75%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  + P+ R   L ++++  +R AI
Sbjct: 1   MARIAGVDLPRDKRIEIALTYIYGIGLTRSKEILAKTGVNPDTRTRDLTDADIAALRAAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           ++ YQVEGDLRR  AMNIKRLMD+GCYRG RHR GLPVRGQ
Sbjct: 61  DE-YQVEGDLRRLEAMNIKRLMDIGCYRGRRHRLGLPVRGQ 100


>gi|327402760|ref|YP_004343598.1| 30S ribosomal protein S13P [Fluviicola taffensis DSM 16823]
 gi|327318268|gb|AEA42760.1| SSU ribosomal protein S13P [Fluviicola taffensis DSM 16823]
          Length = 124

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++P+ KR V  L YI GIG  +++ +     I    +V    + ++  IR AI
Sbjct: 1   MARIAGIDLPKNKRGVIGLTYIFGIGRSTAKKVLVNNGIDENIKVQDWNDDQIALIRTAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +  + EG LR  + +NIKRLMD+GC RG+RHR GLP+RGQRT  N+RTRK   K    +
Sbjct: 61  SE-IKTEGQLRSEIQLNIKRLMDIGCTRGIRHRAGLPLRGQRTKNNSRTRKGRRKTVANK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|220906741|ref|YP_002482052.1| 30S ribosomal protein S13 [Cyanothece sp. PCC 7425]
 gi|254811145|sp|B8HMS6|RS13_CYAP4 RecName: Full=30S ribosomal protein S13
 gi|219863352|gb|ACL43691.1| ribosomal protein S13 [Cyanothece sp. PCC 7425]
          Length = 126

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KRV   L YI+GIG   SQ I  +  + P+ R+ +L ++++  +R A+
Sbjct: 1   MARIAGVDLPRDKRVEIGLTYIYGIGLTRSQHILAETGVNPDTRIRELTDADISALRTAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E  YQVEGDLRR   MNIKRL D+GCYRG RHR GLPVRGQ
Sbjct: 61  EA-YQVEGDLRRLENMNIKRLQDIGCYRGRRHRMGLPVRGQ 100


>gi|33519680|ref|NP_878512.1| 30S ribosomal protein S13 [Candidatus Blochmannia floridanus]
 gi|81666638|sp|Q7VQC6|RS13_BLOFL RecName: Full=30S ribosomal protein S13
 gi|33517343|emb|CAD83728.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia
           floridanus]
          Length = 118

 Score =  153 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K  V AL  I+GIG   ++ IC  + +    ++ QL +  + ++R  I
Sbjct: 1   MVRIAGVNVPDRKHAVIALMSIYGIGRSRAKLICLSIGVDEYTKIGQLSDVYIDKMRNEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNARTRK   K  
Sbjct: 61  AK-YVVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTRKGPKKLI 116


>gi|221133737|ref|ZP_03560042.1| 30S ribosomal protein S13 [Glaciecola sp. HTCC2999]
          Length = 118

 Score =  153 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K  V A+  I GIG   ++ IC    +    ++  L E+ + ++R  +
Sbjct: 1   MARIAGINIPEHKHTVIAIQAIFGIGATRAKSICASAGVAESTKIKDLDETTIDKLRDEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + + VEGDLRR V+M+IKRLMDLGC+RG+RHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  AK-FTVEGDLRREVSMSIKRLMDLGCFRGIRHRRSLPLRGQRTKTNARTRKGPRKPI 116


>gi|37523143|ref|NP_926520.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421]
 gi|81708852|sp|Q7NFF2|RS13_GLOVI RecName: Full=30S ribosomal protein S13
 gi|35214146|dbj|BAC91515.1| 30S ribosomal protein S13 [Gloeobacter violaceus PCC 7421]
          Length = 127

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 61/101 (60%), Positives = 70/101 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI GIG   +  I     I P  RV +L + +V  +R+ I
Sbjct: 1   MARIAGVDIPREKRVEIALTYIFGIGPSRATQILLSTGINPNLRVRELTDVQVSLLREEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           EQ YQVEGDLRR   +NIKRLMD+GC RG RHR GLPVRGQ
Sbjct: 61  EQKYQVEGDLRRFENINIKRLMDIGCLRGRRHRLGLPVRGQ 101


>gi|41469448|gb|AAS07249.1| putative 30S ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|108710647|gb|ABF98442.1| 30S ribosomal protein S13, putative, expressed [Oryza sativa
           Japonica Group]
 gi|164375541|gb|ABY52938.1| chloroplast 30S ribosomal protein S13 precursor [Oryza sativa
           Japonica Group]
 gi|222625639|gb|EEE59771.1| hypothetical protein OsJ_12269 [Oryza sativa Japonica Group]
          Length = 171

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 3/120 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y +EGDL+R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K   +  VA+K+
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG-RRASVAKKK 164


>gi|218193603|gb|EEC76030.1| hypothetical protein OsI_13197 [Oryza sativa Indica Group]
          Length = 171

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 3/120 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y +EGDL+R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K   +  VA+K+
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG-RRASVAKKK 164


>gi|227502696|ref|ZP_03932745.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725]
 gi|227076426|gb|EEI14389.1| ribosomal protein S13 [Corynebacterium accolens ATCC 49725]
          Length = 108

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/108 (49%), Positives = 73/108 (67%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI+GIG   ++++  K  I P+ R   L + +V  +R AIE  ++VEGDLRR V
Sbjct: 1   MEVALTYIYGIGPTRAKELLEKTGISPDLRTDNLEDEQVSALRDAIEGSWKVEGDLRRQV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +I+R +++G Y+GLRHRRGLPVRGQRT TNARTRK   K    +K+
Sbjct: 61  QADIRRKIEIGSYKGLRHRRGLPVRGQRTKTNARTRKGPKKTIAGKKK 108


>gi|71891996|ref|YP_277726.1| 30S ribosomal protein S13 [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|91207689|sp|Q493I7|RS13_BLOPB RecName: Full=30S ribosomal protein S13
 gi|71796102|gb|AAZ40853.1| 30S ribosomal subunit protein S13 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 121

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVN+P  K  V AL  I+GIG   ++ IC    I    ++ +L E  + ++R A+
Sbjct: 1   MVRIAGVNVPDRKHAVVALMSIYGIGKSRARSICLNTGIDEHVQLCKLSEIHIDKLRDAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           ++ Y VEGDLRR V +NIKRL+DLG YRGLRHRR LPVRGQRT TNART K   K 
Sbjct: 61  DE-YIVEGDLRREVTLNIKRLIDLGTYRGLRHRRNLPVRGQRTRTNARTCKGPRKS 115


>gi|15837775|ref|NP_298463.1| 30S ribosomal protein S13 [Xylella fastidiosa 9a5c]
 gi|32363422|sp|Q9PE55|RS13_XYLFA RecName: Full=30S ribosomal protein S13
 gi|9106139|gb|AAF83983.1|AE003951_8 30S ribosomal protein S13 [Xylella fastidiosa 9a5c]
          Length = 118

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR V M IKRLMDL CYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRGLPLRGQRTRTNARTRKGPRKAI 116


>gi|404593|gb|AAD10542.1| uncertain [Mycoplasma genitalium]
          Length = 117

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/114 (50%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           +IP  KR+  AL YI GIG  S++ I  K  I P++RV  L E E++ IR A    Y++E
Sbjct: 1   DIPNQKRIEIALTYIFGIGLSSAKTILKKAKINPDKRVKDLSEEELVAIRNA-ASGYKIE 59

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           GDLRR +A+NIK L ++G ++G+RHR+ LPVRGQRT TNARTRK   K    +K
Sbjct: 60  GDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRKGPRKTVANKK 113


>gi|182412029|ref|YP_001817095.1| 30S ribosomal protein S13 [Opitutus terrae PB90-1]
 gi|226712770|sp|B1ZNC6|RS13_OPITP RecName: Full=30S ribosomal protein S13
 gi|177839243|gb|ACB73495.1| ribosomal protein S13 [Opitutus terrae PB90-1]
          Length = 129

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/118 (48%), Positives = 75/118 (63%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV IP  K+V  +L YI+GIG   +  +  +  + P+ R   L E ++ +I   I
Sbjct: 1   MPRLLGVEIPAKKKVAYSLRYINGIGPTRADLLVKEAGLSPDMRAQDLTEEQLNKILHLI 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            E  + +EGDLRR +A N+KRL  + CYRG+RHRRGLPVRGQRT TNARTRK   K  
Sbjct: 61  TEHKWVLEGDLRREIAGNLKRLQAINCYRGVRHRRGLPVRGQRTSTNARTRKGPRKTV 118


>gi|299830618|ref|YP_003735066.1| 30S ribosomal protein S13 [Durinskia baltica]
 gi|297384982|gb|ADI40281.1| 30S ribosomal protein S13 [Durinskia baltica]
          Length = 123

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/123 (45%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++  AL YIHGIG  +++ +     I  + RV+ L   + + +RQ I
Sbjct: 1   MVRLVGVDLPRNKKIAYALTYIHGIGLTTAKKLIELAEIDSDLRVYDLTTEQAVALRQTI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ESSDLKLEGDLRRFTGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|284929582|ref|YP_003422104.1| 30S ribosomal protein S13P [cyanobacterium UCYN-A]
 gi|284810026|gb|ADB95723.1| SSU ribosomal protein S13P [cyanobacterium UCYN-A]
          Length = 127

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/101 (52%), Positives = 72/101 (71%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV++PR KR+   L Y+ GIG   SQ I  +  + P+ RV  L + ++  +R  I
Sbjct: 1   MARISGVDLPRDKRIEIGLTYLFGIGLSRSQKILAETGVNPDIRVRDLSDEDLTSLRVYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           ++++Q+EGDLRR  AMNIKRL D+G YRG RHR+GLPVRGQ
Sbjct: 61  DENFQIEGDLRRWEAMNIKRLADIGTYRGRRHRQGLPVRGQ 101


>gi|255630109|gb|ACU15408.1| unknown [Glycine max]
          Length = 162

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            R+ GV IP  KR+  +L YIHG+G   ++ I   + +   +   +L E E+I +R  + 
Sbjct: 43  VRVGGVEIPNNKRIEYSLQYIHGVGRTRAKQILCDIQMD-NKITKELTEEELITLRDEVS 101

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NIKRL D+ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 102 K-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKK 160

Query: 122 R 122
           +
Sbjct: 161 K 161


>gi|168704698|ref|ZP_02736975.1| 30S ribosomal protein S13 [Gemmata obscuriglobus UQM 2246]
          Length = 127

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/121 (46%), Positives = 78/121 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI GV+IP  K    +L YI G+G  ++ ++C KL + P+RR  +L + E+ +I   +
Sbjct: 1   MPRIQGVDIPPDKPTHISLRYIRGLGPTTALEVCEKLNLDPQRRAKELNDKEIAEIAVLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEG LRR    NI RL ++ CYRG RHR+ LPVRGQR+ TNARTRK   K    +
Sbjct: 61  DKEYLVEGPLRRVEGSNIARLKEIKCYRGERHRKNLPVRGQRSKTNARTRKGIRKTVAGK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|90994485|ref|YP_536975.1| ribosomal protein S13 [Porphyra yezoensis]
 gi|122194694|sp|Q1XDJ3|RR13_PORYE RecName: Full=30S ribosomal protein S13-2, chloroplastic
 gi|90819049|dbj|BAE92418.1| 30S ribosomal protein S13 [Porphyra yezoensis]
          Length = 126

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 86/122 (70%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + +   L + +V+ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILEKTNIDADIKCQDLNDQQVVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT TNARTR+   K    +
Sbjct: 61  ESNYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRTNARTRRGGKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|118602235|ref|YP_903450.1| 30S ribosomal protein S13 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|158706273|sp|A1AVM2|RS13_RUTMC RecName: Full=30S ribosomal protein S13
 gi|118567174|gb|ABL01979.1| SSU ribosomal protein S13P [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 117

 Score =  151 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   ++  C  L + P  +V  + E ++  IR  +
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAKATCKILKLDPATKVVDIAEDQLELIRAEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y+VEGDLRR V+M+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK   +  
Sbjct: 61  AK-YEVEGDLRRQVSMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRKGPRRLI 116


>gi|154706597|ref|YP_001425160.1| 30S ribosomal protein S13 [Coxiella burnetii Dugway 5J108-111]
 gi|161349360|ref|ZP_02096744.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177']
 gi|161830195|ref|YP_001596207.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 331]
 gi|212213228|ref|YP_002304164.1| 30S ribosomal protein S13 [Coxiella burnetii CbuG_Q212]
 gi|212218096|ref|YP_002304883.1| 30S ribosomal protein S13 [Coxiella burnetii CbuK_Q154]
 gi|189040499|sp|A9KD09|RS13_COXBN RecName: Full=30S ribosomal protein S13
 gi|189040500|sp|A9NAZ2|RS13_COXBR RecName: Full=30S ribosomal protein S13
 gi|226712723|sp|B6J5F4|RS13_COXB1 RecName: Full=30S ribosomal protein S13
 gi|226712724|sp|B6J241|RS13_COXB2 RecName: Full=30S ribosomal protein S13
 gi|154355883|gb|ABS77345.1| SSU ribosomal protein S13P [Coxiella burnetii Dugway 5J108-111]
 gi|161762062|gb|ABX77704.1| ribosomal protein S13 [Coxiella burnetii RSA 331]
 gi|164601575|gb|EDQ95166.1| ribosomal protein S13 [Coxiella burnetii 'MSU Goat Q177']
 gi|212011638|gb|ACJ19019.1| SSU ribosomal protein S13P [Coxiella burnetii CbuG_Q212]
 gi|212012358|gb|ACJ19738.1| SSU ribosomal protein S13P [Coxiella burnetii CbuK_Q154]
          Length = 119

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/116 (52%), Positives = 77/116 (66%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  K    AL  I+GIG   + +IC +  I P  +V  L E+E+  +R  + 
Sbjct: 3   ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + + VEGDLRR  +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK   K  
Sbjct: 63  K-FSVEGDLRRERSMDIKRKMDLGTYEGIRHRRGLPLRGQRTRSNARTRKGKRKPI 117


>gi|12751544|ref|NP_043597.2| ribosomal protein S13 [Odontella sinensis]
 gi|32363503|sp|P49501|RR13_ODOSI RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|13620208|emb|CAA91629.2| 30S ribosomal protein S13 [Odontella sinensis]
          Length = 123

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YIHGIG  S++ I     I PE R   L   + I +R  +
Sbjct: 1   MVRLIGVDLPRNKRIAYALTYIHGIGITSARKIIELAEISPETRTDDLTTEQTIALRDQL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  D  +EGDLR    +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ESIDLNLEGDLRCFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|118411078|ref|YP_874473.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum]
 gi|125987678|sp|A0T0J8|RR13_PHATC RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|116739825|gb|ABK20696.1| 30S ribosomal protein S13 [Phaeodactylum tricornutum]
          Length = 123

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR KR+  AL YIHGIG  S++ I     I PE R   L   E + +RQ +
Sbjct: 1   MVRLVGVDLPRNKRIAYALTYIHGIGLTSARKIIEIANINPETRTVDLTTEETVALRQTL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+ D ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  EESDLKLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|293977951|ref|YP_003543381.1| 30S ribosomal protein S13P [Candidatus Sulcia muelleri DMIN]
 gi|292667882|gb|ADE35517.1| SSU ribosomal protein S13P [Candidatus Sulcia muelleri DMIN]
          Length = 123

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/121 (41%), Positives = 76/121 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA ++G+ IP  K  + AL YI GIG  +S+ I     I    +V    + ++ +IR+ I
Sbjct: 1   MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVRNWSDEDINKIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             + ++EG+LR  + ++IKR++++GCYRG+RHR GLPVRGQ+T  N RTRK   K    +
Sbjct: 61  SSNLRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRKGKKKTVANK 120

Query: 121 K 121
           K
Sbjct: 121 K 121


>gi|118465138|ref|YP_883536.1| 30S ribosomal protein S13 [Mycobacterium avium 104]
 gi|118166425|gb|ABK67322.1| ribosomal protein S13p/S18e [Mycobacterium avium 104]
          Length = 110

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/108 (46%), Positives = 70/108 (64%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI+G+G   S +I     I  + R   L + ++  +R  IE + +VEGDLRR V
Sbjct: 1   MEIALTYIYGVGRTRSNEILAATGIDRDLRTRDLTDDQLTHLRDYIEANLKVEGDLRREV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +I+R +++GCY+GLRHRRGLPVRGQRT TNARTRK   +    +K+
Sbjct: 61  QADIRRKIEIGCYQGLRHRRGLPVRGQRTKTNARTRKGPKRTIAGKKK 108


>gi|29653612|ref|NP_819304.1| 30S ribosomal protein S13 [Coxiella burnetii RSA 493]
 gi|32363225|sp|P59753|RS13_COXBU RecName: Full=30S ribosomal protein S13
 gi|29540874|gb|AAO89818.1| SSU ribosomal protein S13P [Coxiella burnetii RSA 493]
          Length = 119

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/116 (52%), Positives = 77/116 (66%), Gaps = 1/116 (0%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARIAGVNIP  K    AL  I+GIG   + +IC +  I P  +V  L E+E+  +R  + 
Sbjct: 3   ARIAGVNIPVQKHARIALQAIYGIGNSRALEICKEAKIDPATKVKDLSEAELDALRTEVG 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + + VEGDLRR  +M+IKR MDLG Y G+RHRRGLP+RGQRT +NARTRK   K  
Sbjct: 63  K-FSVEGDLRRERSMDIKRKMDLGAYEGIRHRRGLPLRGQRTRSNARTRKGKRKPI 117


>gi|225860275|ref|YP_002741784.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|225727097|gb|ACO22948.1| ribosomal protein S13p/S18e, unverified frameshift [Streptococcus
           pneumoniae Taiwan19F-14]
          Length = 109

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKN 104


>gi|224082224|ref|XP_002306609.1| predicted protein [Populus trichocarpa]
 gi|222856058|gb|EEE93605.1| predicted protein [Populus trichocarpa]
          Length = 168

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP +KRV  +L YIHGIG   ++ I + L +   +    L E E+I +R  + 
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTM-ENKITKDLSEDELITLRDEVS 105

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 106 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKK 164

Query: 122 R 122
           +
Sbjct: 165 K 165


>gi|224066873|ref|XP_002302256.1| predicted protein [Populus trichocarpa]
 gi|118488232|gb|ABK95935.1| unknown [Populus trichocarpa]
 gi|222843982|gb|EEE81529.1| predicted protein [Populus trichocarpa]
          Length = 168

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/121 (44%), Positives = 77/121 (63%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP +KRV  +L YIHGIG  +++ I + L++   +    L E E+I +R  + 
Sbjct: 47  ARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSM-ENKITKDLSEEELIILRDEVS 105

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 106 K-YTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKK 164

Query: 122 R 122
           +
Sbjct: 165 K 165


>gi|296282605|ref|ZP_06860603.1| 30S ribosomal protein S13 [Citromicrobium bathyomarinum JL354]
          Length = 108

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/108 (58%), Positives = 79/108 (73%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           ++ AL YIHGIG   + +I +KL I  + RV  L + EV++IR+ I++++ VEGDLRR  
Sbjct: 1   MIIALTYIHGIGRTKAVEIADKLGIDHKTRVQDLTDEEVLRIRETIDEEHTVEGDLRRQT 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           AMNIKRLMDL  YRGLRHR GLPVRGQRTHTNARTRK   K    +K+
Sbjct: 61  AMNIKRLMDLRSYRGLRHRAGLPVRGQRTHTNARTRKGKAKPIAGKKK 108


>gi|28198374|ref|NP_778688.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1]
 gi|71901053|ref|ZP_00683163.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|182681015|ref|YP_001829175.1| 30S ribosomal protein S13 [Xylella fastidiosa M23]
 gi|32363279|sp|Q87E61|RS13_XYLFT RecName: Full=30S ribosomal protein S13
 gi|226712807|sp|B2I8J0|RS13_XYLF2 RecName: Full=30S ribosomal protein S13
 gi|28056444|gb|AAO28337.1| 30S ribosomal protein S13 [Xylella fastidiosa Temecula1]
 gi|71729180|gb|EAO31301.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|182631125|gb|ACB91901.1| ribosomal protein S13 [Xylella fastidiosa M23]
 gi|307579484|gb|ADN63453.1| 30S ribosomal protein S13 [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 118

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L ESE+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSESEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRKGPRKAI 116


>gi|149001659|ref|ZP_01826632.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69]
 gi|147760117|gb|EDK67106.1| ribosomal protein S13 [Streptococcus pneumoniae SP14-BS69]
          Length = 109

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IP  KRVV +L Y++GIG  +S+ I     I  + RV  L   +   IR+ +
Sbjct: 1   MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDVRVRDLTSDQEDAIRREV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           +   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T  
Sbjct: 61  DA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKK 104


>gi|226500900|ref|NP_001149618.1| LOC100283244 [Zea mays]
 gi|195628536|gb|ACG36098.1| 30S ribosomal protein S13 [Zea mays]
          Length = 170

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 3/120 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKXVGK 105

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            Y +EGDL+R   + I+RL ++ CY+G+RH+ GLPVRGQRT  N RT K   +  VA+K+
Sbjct: 106 -YMIEGDLKRFNRVAIERLKEIRCYKGIRHKLGLPVRGQRTKNNCRTLKG-KRASVAKKK 163


>gi|71276501|ref|ZP_00652776.1| Ribosomal protein S13 [Xylella fastidiosa Dixon]
 gi|71900588|ref|ZP_00682715.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|170729721|ref|YP_001775154.1| 30S ribosomal protein S13 [Xylella fastidiosa M12]
 gi|226712808|sp|B0U5M0|RS13_XYLFM RecName: Full=30S ribosomal protein S13
 gi|71162678|gb|EAO12405.1| Ribosomal protein S13 [Xylella fastidiosa Dixon]
 gi|71729645|gb|EAO31749.1| Ribosomal protein S13 [Xylella fastidiosa Ann-1]
 gi|167964514|gb|ACA11524.1| 30S ribosomal protein S13 [Xylella fastidiosa M12]
          Length = 118

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 61/117 (52%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGVN+   K V   L  I+GIG   S+ +C+   +    ++  L E E+ ++R  +
Sbjct: 1   MARIAGVNLAIQKHVWIGLQSIYGIGRTRSRKVCDAANVAIYTKIRDLSEPEIERLRVEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y +EGDLRR V M IKRLMDL CYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 61  GK-YVIEGDLRREVGMAIKRLMDLNCYRGLRHRRCLPLRGQRTRTNARTRKGPRKAI 116


>gi|158334434|ref|YP_001515606.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017]
 gi|189040488|sp|B0C432|RS13_ACAM1 RecName: Full=30S ribosomal protein S13
 gi|158304675|gb|ABW26292.1| 30S ribosomal protein S13 [Acaryochloris marina MBIC11017]
          Length = 126

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 85/122 (69%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG   SQ+I     + P+ RV +L + +V  +R A+
Sbjct: 1   MARIAGVDLPRDKRIEIGLTYIYGIGLTRSQEILAATGVNPDTRVRELGDQDVAALRNAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
              YQVEGDLRR  +MN+KRLMD+G YRG RHR GLPVRGQRT TN+RTR+   +    +
Sbjct: 61  -AGYQVEGDLRRWESMNVKRLMDIGSYRGRRHRAGLPVRGQRTRTNSRTRRSAKRTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|148244351|ref|YP_001219045.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA]
 gi|158706294|sp|A5CXI6|RS13_VESOH RecName: Full=30S ribosomal protein S13
 gi|146326178|dbj|BAF61321.1| 30S ribosomal protein S13 [Candidatus Vesicomyosocius okutanii HA]
          Length = 117

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NIP  K +V  L  I GIG   +++IC  L + P  +V  + E+++  IR  I
Sbjct: 1   MARIAGINIPTHKHIVIGLQSIFGIGDTRAREICITLKLDPVTKVANITENQLELIRVEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + Y+VEGDLRR +AM+IKRL DLGCYRG+RHR+ LP+RGQRT TNARTRK   +  
Sbjct: 61  AK-YEVEGDLRRQLAMDIKRLKDLGCYRGVRHRKSLPLRGQRTKTNARTRKGPRRLI 116


>gi|281415635|ref|ZP_06247377.1| SSU ribosomal protein S13P [Micrococcus luteus NCTC 2665]
          Length = 108

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/108 (49%), Positives = 72/108 (66%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           ++ AL YI+G+G   +++      I P  RV  L   +++Q+R  IE  Y+VEGDLRR V
Sbjct: 1   MIIALTYIYGVGKTRAEETLAATGIDPNIRVKDLSAEQLVQLRDHIEGSYKVEGDLRREV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           A +I+R +++G Y GLRHRRGLPVRGQRT TNARTRK   K    +K+
Sbjct: 61  AADIRRKVEIGSYEGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGKKK 108


>gi|330318670|gb|AEC10995.1| 30S ribosomal protein s13 [Camellia sinensis]
          Length = 165

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            R+ GV IP  KR+  +L YIHGIG  +S+ I   L++   +    L E E+I  R  + 
Sbjct: 44  VRVGGVEIPNNKRIEYSLRYIHGIGRTTSRQILVDLSMD-NKITKDLFEEELISFRDQVS 102

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y VEGD RR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 103 K-YMVEGDFRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKK 161

Query: 122 R 122
           +
Sbjct: 162 K 162


>gi|255545528|ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
 gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13, putative [Ricinus communis]
          Length = 290

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G   ++ I + L++   +   +L E E+I +R  + 
Sbjct: 169 ARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSM-ENKITKELSEEELITLRDEVS 227

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 228 K-YMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKK 286

Query: 122 R 122
           +
Sbjct: 287 K 287



 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL +I GIG + +  I   L++   +R   L   E+  +R  + +
Sbjct: 37  RVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSL-ENKRTKDLTGLELHTLRNEVSK 95

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            Y +  +L R V  +I+RL D+ CYRG  H   LP RGQ T TNARTRK   
Sbjct: 96  -YLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRKGMR 146


>gi|255627531|gb|ACU14110.1| unknown [Glycine max]
          Length = 162

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            R+ GV IP  KR+  +L +IHG+G   ++ I   + +   +   +L E E+I +R  + 
Sbjct: 43  VRVGGVEIPNNKRIEYSLQHIHGVGRTRAKQILCDIQMD-NKITKELTEEELITLRDEVS 101

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NIKRL D+ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 102 K-YMIEGDLRRFNAVNIKRLKDIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAITGKK 160

Query: 122 R 122
           +
Sbjct: 161 K 161


>gi|308072481|dbj|BAJ22102.1| ribosomal protein S13 [Cycas taitungensis]
          Length = 150

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/114 (44%), Positives = 75/114 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G  +   ++V  AL  I GIG K +  +C +L I    +V++L + ++ QI Q I
Sbjct: 1   MSYILGARLVPNEQVRIALTKIDGIGPKKATRVCYRLGISDNIKVNELTKYQIDQIEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +KFG
Sbjct: 61  GQDHVVHWELKRGKRADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKFG 114


>gi|11467125|ref|NP_054426.1| ribosomal protein S13 [Marchantia polymorpha]
 gi|417736|sp|P26872|RT13_MARPO RecName: Full=Ribosomal protein S13, mitochondrial
 gi|250828|gb|AAB22420.1| ribosomal protein S13 [Marchantia polymorpha=liverwort, Peptide
           Mitochondrial, 120 aa]
 gi|786210|gb|AAC09423.1| rps13 [Marchantia polymorpha]
          Length = 120

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/114 (43%), Positives = 75/114 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   K+V  AL  I GIG K +  +C++L +    +V++L + +  QI + I
Sbjct: 1   MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDQLGLSDTIKVNKLTKYQFDQILKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            Q+Y V+ +L+R +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T +K  
Sbjct: 61  SQNYLVDSELKRVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRKLR 114


>gi|262186727|ref|YP_003275986.1| ribosomal protein S13 [Pleurozia purpurea]
 gi|237780724|gb|ACR19370.1| ribosomal protein S13 [Pleurozia purpurea]
          Length = 120

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/114 (43%), Positives = 74/114 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   K+V  AL  I GIG K +  +C++L +    +V++L + +  QI + I
Sbjct: 1   MSYILGTNLNSNKQVKIALTRIFGIGPKKAIQVCDRLGLSDNIKVNKLTKYQFDQIIEII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            Q+Y V+ +L R +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T +K  
Sbjct: 61  SQNYLVDSELERVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTSRKLR 114


>gi|15829034|ref|NP_326394.1| 30S ribosomal protein S13 [Mycoplasma pulmonis UAB CTIP]
 gi|32363385|sp|Q98Q06|RS13_MYCPU RecName: Full=30S ribosomal protein S13
 gi|14089978|emb|CAC13736.1| 30S RIBOSOMAL PROTEIN S13 [Mycoplasma pulmonis]
          Length = 132

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/131 (47%), Positives = 78/131 (59%), Gaps = 11/131 (8%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA----------IPPERRVHQLVE 50
           MARI  + IP  KRVV +L YI GIG   S++I  K               + RV  L E
Sbjct: 1   MARILNIEIPSNKRVVISLTYILGIGKSLSKEIIVKANEKLAKAKEKTFTEDSRVKDLSE 60

Query: 51  SEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
            ++  IR +  + Y  EGDLRR V++NIKRLM++ CYRG+RHR+GLPVRGQ T  NARTR
Sbjct: 61  EQLQAIRDS-AKTYLTEGDLRREVSLNIKRLMEIKCYRGIRHRKGLPVRGQVTQKNARTR 119

Query: 111 KKFGKGGVARK 121
           K   K    +K
Sbjct: 120 KGPRKTVAGKK 130


>gi|261749448|ref|YP_003257134.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497541|gb|ACX83991.1| 30S ribosomal protein S13 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 126

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/121 (40%), Positives = 77/121 (63%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+GV++P++KR +  L Y++GI    S+ I + + I    +V    + ++  IR+ I 
Sbjct: 3   VRISGVDLPKSKRGIIGLTYLYGISKSLSKKILSSVGIDENMKVMDWSDEKISNIRKYIS 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
              ++EG+LR  + ++IKRLMD+GCYRG RHR+ LP+RGQ+T  N RTRK   K    +K
Sbjct: 63  NHVKIEGELRSEIQLSIKRLMDIGCYRGTRHRKRLPLRGQKTKNNCRTRKGRKKTVANKK 122

Query: 122 R 122
           +
Sbjct: 123 K 123


>gi|84515658|ref|ZP_01003019.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53]
 gi|84510100|gb|EAQ06556.1| 30S ribosomal protein S13 [Loktanella vestfoldensis SKA53]
          Length = 104

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/103 (58%), Positives = 72/103 (69%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIK 79
            YI GIG   ++ IC    I   RRV+ L ++E++ IR+ I+ +  VEGDLRR   MNIK
Sbjct: 2   TYITGIGPAIAEQICEATNIDRARRVNDLSDAEILTIREFIDANLTVEGDLRRETQMNIK 61

Query: 80  RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           RLMDLGCYRGLRHRR LPVRGQRTHTNARTRK   K    +K+
Sbjct: 62  RLMDLGCYRGLRHRRNLPVRGQRTHTNARTRKGPAKAIAGKKK 104


>gi|219559528|ref|ZP_03538604.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T17]
 gi|289571694|ref|ZP_06451921.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
 gi|289545448|gb|EFD49096.1| 30S ribosomal protein S13 rpsM [Mycobacterium tuberculosis T17]
          Length = 110

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/108 (48%), Positives = 70/108 (64%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI GIG   S +I     I  + R   L E ++I +R  IE + +VEGDLRR V
Sbjct: 1   MEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYIEANLKVEGDLRREV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +I+R +++GCY+GLRHRRG+PVRGQRT TNARTRK   +    +K+
Sbjct: 61  QADIRRKIEIGCYQGLRHRRGMPVRGQRTKTNARTRKGPKRTIAGKKK 108


>gi|295698629|ref|YP_003603284.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA]
 gi|291157451|gb|ADD79896.1| ribosomal protein S13p/S18e [Candidatus Riesia pediculicola USDA]
          Length = 119

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/118 (53%), Positives = 80/118 (67%), Gaps = 2/118 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV+I   K +  A+  I+GIG K S+ IC +  I P  ++  L E EV ++R+ I
Sbjct: 1   MVRIAGVHISENKHIWVAIQSIYGIGKKRSRSICFRTGIEPTSKISFLSEEEVDRLRKEI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG-LPVRGQRTHTNARTRKKFGKGG 117
            + Y VEGDLRR   ++IKRL+DLGCYRG+RH+ G LPVRGQRT TNARTRK   K  
Sbjct: 61  SR-YVVEGDLRREKNLSIKRLIDLGCYRGIRHKHGSLPVRGQRTKTNARTRKGPRKPI 117


>gi|315320584|ref|YP_004072641.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005]
 gi|283569057|gb|ADB27594.1| 30S ribosomal protein S13 [Thalassiosira oceanica CCMP1005]
          Length = 123

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G+++P+ KR+  AL YIHGIG  S++ I     I PE R +++   + + +R  +
Sbjct: 1   MVRLLGIDLPKNKRIEYALTYIHGIGLTSAKKIVKLAEINPETRTNEITVEQSVALRNIL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  + ++EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ENFELKLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|145344575|ref|XP_001416805.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus
           lucimarinus CCE9901]
 gi|144577031|gb|ABO95098.1| Plastid ribosomal protein S13 small ribosomal subunit [Ostreococcus
           lucimarinus CCE9901]
          Length = 119

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/121 (47%), Positives = 80/121 (66%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+AGV IP  KR   AL Y++GIG  S++ I     +   +R+ +  E E+ Q+R+ +E
Sbjct: 1   ARVAGVEIPNNKRCETALTYVYGIGETSAKAIMAATGL-ENKRLREFSEQELTQLREEVE 59

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + YQ+EG+LRR + MNIKRL ++ C+RG  H R LPVRGQRT TNARTRK   K    +K
Sbjct: 60  K-YQIEGELRRFITMNIKRLKEIQCHRGKMHIRNLPVRGQRTKTNARTRKGKVKTVAGKK 118

Query: 122 R 122
           +
Sbjct: 119 K 119


>gi|254430942|ref|ZP_05044645.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001]
 gi|197625395|gb|EDY37954.1| ribosomal protein S13p/S18e [Cyanobium sp. PCC 7001]
          Length = 121

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL Y++GIG   +Q I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEIALTYVYGIGLTRAQKILAKTGVDPDTRVKDLSDADVQKLRGA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 60  AETFTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|262341035|ref|YP_003283890.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272372|gb|ACY40280.1| 30S ribosomal protein S13 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 126

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/111 (42%), Positives = 76/111 (68%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+GV++PR+KR +  L Y++GIG   S+ I + + I   +++    + ++ ++R+ I 
Sbjct: 3   VRISGVDLPRSKRGIIGLTYLYGIGKSLSKIILHSVGIDENKKIENWSDDDISKVRKYIS 62

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            + ++EG+LR  +  N+KRLMD+GCY G RHR+GLP+RGQ+T  N RTRK 
Sbjct: 63  NNIKIEGELRSEIQFNVKRLMDIGCYVGTRHRKGLPLRGQKTKNNCRTRKG 113


>gi|11465761|ref|NP_053905.1| ribosomal protein S13 [Porphyra purpurea]
 gi|1710693|sp|P51295|RR13_PORPU RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|1276761|gb|AAC08181.1| 30S ribosomal protein S13 [Porphyra purpurea]
          Length = 126

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  AL YI+GIG   S++I  K  I  + R   L + +++ IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIALTYIYGIGLSRSKEILKKTNIDADIRCQNLNDQQIVSIREIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  YQ+EGDL+R  +M+IKRLM++  YRG RHR GLP+RGQRT TNARTR+   K    +
Sbjct: 61  ESSYQIEGDLKRFESMSIKRLMEISTYRGRRHRLGLPLRGQRTRTNARTRRGGKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|300870625|ref|YP_003785496.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
 gi|300688324|gb|ADK30995.1| 30S ribosomal protein S13 [Brachyspira pilosicoli 95/1000]
          Length = 129

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/114 (45%), Positives = 70/114 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AI
Sbjct: 1   MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E   +VEGDLR  +  NIKRL D+  YRG+RH + LPVRGQRT TN+R  +  G
Sbjct: 61  EATTKVEGDLRTELFNNIKRLKDIHSYRGMRHIKRLPVRGQRTRTNSRNARGGG 114


>gi|116784057|gb|ABK23197.1| unknown [Picea sitchensis]
 gi|148906984|gb|ABR16636.1| unknown [Picea sitchensis]
 gi|224284072|gb|ACN39773.1| unknown [Picea sitchensis]
          Length = 169

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  K++  +L YIHGIG  +++ +   L +   +   +L ESE+ ++R  + 
Sbjct: 48  ARVGGVEIPNNKKIEYSLQYIHGIGRTTARQVLYDLGM-ENKVTRELNESELTRVRDEVS 106

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR   + I+RL+++ CYRG RH  GLP RGQRT  N RT K        +K
Sbjct: 107 K-YMIEGDLRRFNNLAIRRLIEIQCYRGRRHVAGLPCRGQRTKNNCRTLKGKRVSIAGKK 165

Query: 122 R 122
           +
Sbjct: 166 K 166


>gi|32491314|ref|NP_871568.1| 30S ribosomal protein S13 [Wigglesworthia glossinidia endosymbiont
           of Glossina brevipalpis]
 gi|32363313|sp|Q8D1Z0|RS13_WIGBR RecName: Full=30S ribosomal protein S13
 gi|25166521|dbj|BAC24711.1| rpsM [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 118

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 1/117 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGVNIP  K +V AL  I+GIG   ++ IC K  I   ++V+ L  SE+  IR  +
Sbjct: 1   MTRIAGVNIPEKKHIVIALKKIYGIGNVLARKICKKTGINFSKKVNSLDSSEIELIRNEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            +  ++EGDLRR + +NIKRL+DLG YRGLRH++ LPVRGQRT TNARTRK   K  
Sbjct: 61  LK-LKIEGDLRREMTLNIKRLIDLGTYRGLRHKKHLPVRGQRTKTNARTRKGPRKPI 116


>gi|225630280|ref|YP_002727071.1| ribosomal protein S13 [Wolbachia sp. wRi]
 gi|225592261|gb|ACN95280.1| ribosomal protein S13 [Wolbachia sp. wRi]
          Length = 112

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 55/111 (49%), Positives = 79/111 (71%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
            K V  AL YI+GIG  ++  IC+   +   +RV +L + ++ +I   I Q+Y +EG+LR
Sbjct: 2   RKCVPFALTYIYGIGIATANVICHACEVDKRKRVSELRDEDIEKISSFIRQNYVIEGELR 61

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           + VAMNIK L+++GCYRG+RHR+GLPVRGQRTHTNA+TRK   +  +A K+
Sbjct: 62  KEVAMNIKSLVEMGCYRGVRHRKGLPVRGQRTHTNAKTRKGRSRLPIAGKK 112


>gi|240047281|ref|YP_002960669.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae HRC/581]
 gi|239984853|emb|CAT04843.1| 30S ribosomal protein S13 [Mycoplasma conjunctivae]
          Length = 137

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/134 (44%), Positives = 79/134 (58%), Gaps = 14/134 (10%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47
           MARI  + IP  KR+V AL  I+GIG   + +I  K               I  + +V  
Sbjct: 1   MARILNIEIPNNKRIVIALTSIYGIGRSLASEIVAKTQLVQKEKFANQYPLITEDTKVKD 60

Query: 48  LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           L E  +  IR  I ++Y+ EGDLRR+V  +IKRL+++ CYRG+RHR+GLPVRGQ T  NA
Sbjct: 61  LNEDILHIIRD-IAKEYKTEGDLRRSVQTDIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119

Query: 108 RTRKKFGKGGVARK 121
           RTRK   K  + +K
Sbjct: 120 RTRKGPRKTIMGKK 133


>gi|171914056|ref|ZP_02929526.1| 30S ribosomal protein S13 [Verrucomicrobium spinosum DSM 4136]
          Length = 131

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 1/118 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV IP  KR+  +L YI+GIG   ++ I  +  I P  R  +L + ++ +I + +
Sbjct: 1   MARLLGVEIPNEKRIEASLPYIYGIGPSLTRKILAETGIDPNIRAGELSDEQLAEISRIV 60

Query: 61  -EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +   VEGDLRR +  ++KRL  + CYR  RHRRGLPVRGQRT TN+RTRK   K  
Sbjct: 61  AAKGIVVEGDLRRELGAHMKRLTSINCYRATRHRRGLPVRGQRTKTNSRTRKGKRKTV 118


>gi|168054034|ref|XP_001779438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669123|gb|EDQ55716.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 141

 Score =  146 bits (371), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KRV  AL YIHG+G  +S+ I   + +   +   +L E E+  +R  + 
Sbjct: 19  ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQILLDVGL-ENKITKELSEEELTSLRDEVS 77

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR   + IKRL D+ CYRG RH  GLP RGQ T  NARTR+        +K
Sbjct: 78  K-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRRGKKVTIAGKK 136

Query: 122 R 122
           +
Sbjct: 137 K 137


>gi|318042543|ref|ZP_07974499.1| 30S ribosomal protein S13 [Synechococcus sp. CB0101]
          Length = 121

 Score =  146 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL Y++GIG  ++Q I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDADVQKLRGA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + Y +EGDLRR   M +KRL D+GC RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 60  AESYTLEGDLRRQEGMAMKRLQDIGCVRGRRHRAGLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|91208878|ref|YP_539039.1| ribosomal protein S13 [Physcomitrella patens]
 gi|90991418|dbj|BAE93110.1| ribosomal protein S13 [Physcomitrella patens]
 gi|328775215|gb|AEB40003.1| ribosomal protein S13 [Funaria hygrometrica]
          Length = 122

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 47/114 (41%), Positives = 75/114 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N+   ++V  AL  I G+G K +  +C++L +    +V++L + ++ +I + I
Sbjct: 1   MSYILGTNLVPNEQVEIALTRIFGLGPKKAIQVCDQLGLNDNIKVNKLTKYQIDRIIKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            Q+Y V+ +L R +  +IK+LM +GCYRG RH  GLP+RGQRTHTNA+T +K  
Sbjct: 61  SQNYLVDLELARVIQRDIKQLMSIGCYRGFRHNAGLPLRGQRTHTNAKTCRKVR 114


>gi|194477037|ref|YP_002049216.1| 30S ribosomal protein S13 [Paulinella chromatophora]
 gi|171192044|gb|ACB43006.1| 30S ribosomal protein S13 [Paulinella chromatophora]
          Length = 121

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+GIG  ++Q I  K  + P+ RV  L +SEV+ +R   
Sbjct: 1   MARIAGIDIPRDKRVEIALTYIYGIGLTTAQKILAKTGVNPDTRVKDLEDSEVLSLRNTT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  ET-YTIEGDLRRQEGMALKRLQDIGCTRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|296126888|ref|YP_003634140.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
 gi|296018704|gb|ADG71941.1| 30S ribosomal protein S13 [Brachyspira murdochii DSM 12563]
          Length = 129

 Score =  146 bits (370), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 51/114 (44%), Positives = 69/114 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AI
Sbjct: 1   MARLMGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E   +VEGDLR  +  NIKRL D+  YRG+RH + LPV GQRT TN+R  +  G
Sbjct: 61  EATTKVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARGGG 114


>gi|148243236|ref|YP_001228393.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307]
 gi|158706291|sp|A5GVY1|RS13_SYNR3 RecName: Full=30S ribosomal protein S13
 gi|147851546|emb|CAK29040.1| 30S ribosomal protein S13 [Synechococcus sp. RCC307]
          Length = 121

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+GV+IPR KRV  AL YI+G+G   SQ I     + P+ RV  L +++V ++R A 
Sbjct: 1   MARISGVDIPREKRVEIALTYIYGVGLTRSQKILASTGVSPDTRVKDLSDADVQKLRAA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 60  AETFTLEGDLRRQEGMAMKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|168054032|ref|XP_001779437.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669122|gb|EDQ55715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 128

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KRV  AL YIHG+G  +S+ I   + +   +   +L E E+  +R  + 
Sbjct: 6   ARVGGVEIPNNKRVEVALTYIHGVGNTTSKQILLDVGL-ENKITKELSEEELTSLRDEVS 64

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR   + IKRL D+ CYRG RH  GLP RGQ T  NARTR+        +K
Sbjct: 65  K-YMIEGDLRRFNTLAIKRLKDIQCYRGKRHLAGLPCRGQSTKCNARTRRGKKVTIAGKK 123

Query: 122 R 122
           +
Sbjct: 124 K 124


>gi|317968837|ref|ZP_07970227.1| 30S ribosomal protein S13 [Synechococcus sp. CB0205]
          Length = 121

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL Y++GIG  ++Q I  K  + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEIALTYVYGIGLTTAQKILAKTGVNPDTRVKDLDDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y +EGDLRR   M +KRL D+GC RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 61  ES-YTLEGDLRRQEGMAMKRLQDIGCVRGRRHRVGLPVRGQRTRTNARTRRGSRKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116515237|ref|YP_802866.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285367|sp|Q057C6|RS13_BUCCC RecName: Full=30S ribosomal protein S13
 gi|58384670|gb|AAW72685.1| 30S ribosomal protein S13 [Buchnera aphidicola (Cinara cedri)]
 gi|116257091|gb|ABJ90773.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 119

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG+NI   K ++ AL  I+GIG   S+ IC  + I  + +++ L + ++  +R  I
Sbjct: 1   MTRIAGINISDKKHILVALTSIYGIGISLSKKICFSIGIRCDVKINSLTKEKIESLRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            + + VEGDLRR   +NIKRLMD+GCYRGLRHR+ LPVRGQRT TNARTRK   K   +R
Sbjct: 61  SK-FLVEGDLRREKTINIKRLMDIGCYRGLRHRKHLPVRGQRTKTNARTRKGPRKLIKSR 119


>gi|187251797|ref|YP_001876279.1| 30S ribosomal protein S13 [Elusimicrobium minutum Pei191]
 gi|226712735|sp|B2KEJ6|RS13_ELUMP RecName: Full=30S ribosomal protein S13
 gi|186971957|gb|ACC98942.1| Ribosomal protein S13 [Elusimicrobium minutum Pei191]
          Length = 124

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 2/124 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA--IPPERRVHQLVESEVIQIRQ 58
           MAR+AG+++P+ KR+  AL YI+GIG ++++D+  K    I P  RV  L E++   +  
Sbjct: 1   MARVAGIDLPKNKRIDVALEYIYGIGKRNAKDVIAKANGQIDPTTRVKDLTEAQANLLNT 60

Query: 59  AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
            ++++Y+VEG+LRR ++ NI+R +D G YRG RHR+ LPVRGQRT TN+RTRK   +   
Sbjct: 61  ILQKEYKVEGELRREISGNIQRYVDTGSYRGNRHRKRLPVRGQRTKTNSRTRKGKRRTVG 120

Query: 119 ARKR 122
           ++ +
Sbjct: 121 SKTK 124


>gi|162279916|ref|NP_064014.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|323435141|ref|YP_004222359.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|87248054|gb|ABD36081.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|148491419|dbj|BAA99325.2| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|317905591|emb|CBJ14001.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|319439874|emb|CBJ17577.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
 gi|320148028|emb|CBJ20692.1| ribosomal protein S13 [Beta vulgaris subsp. maritima]
          Length = 116

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/116 (44%), Positives = 75/116 (64%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   K+V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVDDKQVKIALTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK  K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116


>gi|316996011|dbj|BAD83467.2| ribosomal protein S13 [Nicotiana tabacum]
          Length = 116

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 73/115 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K  +
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIR 115


>gi|11467736|ref|NP_050788.1| ribosomal protein S13 [Guillardia theta]
 gi|3914830|sp|O46912|RR13_GUITH RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|3603061|gb|AAC35722.1| ribosomal protein S13 [Guillardia theta]
          Length = 122

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 83/122 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR+  AL YI+G+G  SSQ I  K  I   +R   L ++EV  IR  I
Sbjct: 1   MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCKDLDDNEVSLIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +++Y VEG  +R  +MNIKRLM++ C RG RHR GLP+RGQRT TNARTR+   K    +
Sbjct: 61  DENYPVEGAAKRVESMNIKRLMEINCIRGKRHRVGLPLRGQRTRTNARTRRGAKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|149072028|ref|YP_001293599.1| ribosomal protein S13 [Rhodomonas salina]
 gi|158706197|sp|A6MW20|RR13_RHDSA RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|134302979|gb|ABO70783.1| ribosomal protein S13 [Rhodomonas salina]
          Length = 123

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/122 (50%), Positives = 80/122 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+   L YI+GIG  SSQ I     +    R   L + ++ +IRQ I
Sbjct: 1   MARIAGVDLPRNKRIEIGLTYIYGIGLTSSQSILKVATVDSNIRCKDLTDEDISKIRQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           ++DY VEG  RR   M+IKRLM++ C +G RHR GLP+RGQRT TNARTR+   K    +
Sbjct: 61  DEDYLVEGVARRIETMSIKRLMEINCVKGRRHRDGLPLRGQRTRTNARTRRGSKKTVAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|27904920|ref|NP_778046.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|32363301|sp|Q89A87|RS13_BUCBP RecName: Full=30S ribosomal protein S13
 gi|27904318|gb|AAO27151.1| 30S ribosomal protein S13 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 118

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/115 (51%), Positives = 76/115 (66%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+NI   K VV AL  ++GIG   S+ IC +  I    ++  L + ++  +R  +
Sbjct: 1   MARIAGINIANHKHVVVALMDVYGIGKTRSKLICLRTNISESIKILDLTKDQLELLRCEV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + + VEGDLRR V ++IKRL DL CYRG RHR+ LPVRGQRT TNARTRK   K
Sbjct: 61  LK-FVVEGDLRREVTLSIKRLQDLNCYRGSRHRKKLPVRGQRTKTNARTRKGPRK 114


>gi|94502227|ref|ZP_01308713.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833839|ref|YP_001598035.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS]
 gi|189044303|sp|A8Z688|RS13_SULMW RecName: Full=30S ribosomal protein S13
 gi|94451198|gb|EAT14137.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206329|gb|ABS30639.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri GWSS]
          Length = 126

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA ++G+ IP  K  + AL YI GIG  +S+ I     I    +V    + ++ +IR+ I
Sbjct: 1   MAIVSGIEIPNNKIGLIALTYIFGIGISTSKRIFKDTGIDENIKVINWSDEDINKIRKYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
             + ++EG+LR  + ++IKR++++GCYRG+RHR GLPVRGQ+T  N RTRK 
Sbjct: 61  SSNIRIEGELRFEIQLDIKRMIEIGCYRGIRHRIGLPVRGQKTKNNCRTRKG 112


>gi|87300892|ref|ZP_01083734.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701]
 gi|87284763|gb|EAQ76715.1| 30S ribosomal protein S13 [Synechococcus sp. WH 5701]
          Length = 121

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L Y++GIG   +Q I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEISLTYVYGIGLSRAQKILTKAGVNPDIRVKDLDDGDVQKLRAAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR GLPVRGQRT TNARTR+   K    +
Sbjct: 61  ET-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMGLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|297180258|gb|ADI16477.1| hypothetical protein [uncultured bacterium HF4000_05M23]
          Length = 127

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/123 (47%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA IAGVNIP  +R+  AL  I+GIG  +S+ I   + +    RV  L + ++ ++R A+
Sbjct: 1   MAIIAGVNIPDNQRLEIALTAIYGIGRTTSKKIVGDVGMGDTTRVRDLTDEDLARVRSAV 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+    +EGDLRR   +NI+RL D+  +RG+RHRRGLPVRGQRT TNART++   +    
Sbjct: 61  ERTGLLIEGDLRRETQLNIRRLTDIQTFRGVRHRRGLPVRGQRTKTNARTKRGRRQTVAG 120

Query: 120 RKR 122
           RKR
Sbjct: 121 RKR 123


>gi|11830847|emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]
          Length = 116

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|255022693|ref|ZP_05294679.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL J1-208]
          Length = 111

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 49/104 (47%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           L YI+GIG ++++++  +  +  + R   L E E+ +IR+ +++  +VEGDLRR V +NI
Sbjct: 9   LTYIYGIGKQTAKEVLAEAGVSEDTRTRDLTEEELGKIREILDR-IKVEGDLRREVNLNI 67

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           KRL+++G YRG+RHRRGLPVRGQ T  NARTRK   K    +K+
Sbjct: 68  KRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPSKTVAGKKK 111


>gi|118411210|ref|YP_874604.1| 30S ribosomal protein S13 [Thalassiosira pseudonana]
 gi|125987679|sp|A0T0Z2|RR13_THAPS RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|116739957|gb|ABK20827.1| 30S ribosomal protein S13 [Thalassiosira pseudonana]
          Length = 123

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ G+++PR KR+  AL YIHGIG  S+Q       I  + R   +   + + +R  +
Sbjct: 1   MVRLLGIDLPRNKRIAYALTYIHGIGLTSAQKFIELAEISADTRTDDITTEQAVVLRNLL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E  +  +EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNAR+R+   K    
Sbjct: 61  ENCELNLEGDLRRFNGLNIKRLNEINCHRGKRHRNSLPVRGQRTRTNARSRRGAKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|134059|sp|P23209|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial
          Length = 116

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 72/112 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  ++GIG K +  +C +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|256370800|ref|YP_003108625.1| 30S ribosomal protein S13 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009592|gb|ACU52952.1| 30S ribosomal subunit protein S13 [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 134

 Score =  143 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/110 (48%), Positives = 75/110 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA I+G+ IP+ KR + AL YI GIG  +S+ I N   I   ++V    ++E+ +IR+ I
Sbjct: 1   MAIISGIEIPKNKRGLIALTYIFGIGISTSKKIFNNTGIDKNKKVSNWTDNEIKKIRKFI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
               + EG+LR  + ++IKR+MD+GCYRG+RHR GLPVRGQ+T  N RTR
Sbjct: 61  SDKIKTEGELRLEIQLDIKRIMDIGCYRGIRHRLGLPVRGQKTKKNCRTR 110


>gi|290512090|ref|ZP_06551458.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp.
           1_1_55]
 gi|289775880|gb|EFD83880.1| LOW QUALITY PROTEIN: 30S ribosomal protein S13 [Klebsiella sp.
           1_1_55]
          Length = 106

 Score =  143 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/105 (54%), Positives = 72/105 (68%), Gaps = 1/105 (0%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRR 72
           K  V AL  I GIG   S+ IC +  I    ++ +L E ++  +R+A+ + + VEGDLRR
Sbjct: 1   KHTVIALTAIFGIGKTRSKAICAETGIAENVKISELSEEQIDILREAVGK-FVVEGDLRR 59

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + ++IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 60  EITLSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 104


>gi|229328281|ref|YP_002860257.1| ribosomal protein S13 [Megaceros aenigmaticus]
 gi|192282181|gb|ACF03810.1| ribosomal protein S13 [Nothoceros aenigmaticus]
          Length = 122

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 73/113 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N    K++  AL  I GIG K +  +C +L +    RV++L   ++ +I + I
Sbjct: 1   MSYILGTNSISNKQIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKILKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L+  +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T ++F
Sbjct: 61  SQNYLVDSELKAVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113


>gi|194033240|ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|60498746|dbj|BAC19882.2| Ribosomal protein S13 [Oryza sativa Japonica Group]
          Length = 116

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 73/115 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K  +
Sbjct: 61  AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARKLIR 115


>gi|237728633|ref|ZP_04559114.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2]
 gi|226909255|gb|EEH95173.1| SSU ribosomal protein S13P [Citrobacter sp. 30_2]
          Length = 103

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 1/102 (0%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           + AL  I+G+G   S+ I     I  + ++ +L E ++  +R  + + + VEGDLRR V+
Sbjct: 1   MIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEEQIDTLRDEVAK-FVVEGDLRREVS 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 60  MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101


>gi|215447798|ref|ZP_03434550.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
 gi|289759623|ref|ZP_06519001.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
 gi|289715187|gb|EFD79199.1| 30S ribosomal protein S13 [Mycobacterium tuberculosis T85]
          Length = 100

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 50/100 (50%), Positives = 68/100 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+ GV++PR KR+  AL YI GIG   S +I     I  + R   L E ++I +R  I
Sbjct: 1   MARLVGVDLPRDKRMEVALTYIFGIGRTRSNEILAATGIDRDLRTRDLTEEQLIHLRDYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E + +VEGDLRR V  +I+R +++GCY+GLRHRRG+PVRG
Sbjct: 61  EANLKVEGDLRREVQADIRRKIEIGCYQGLRHRRGMPVRG 100


>gi|169635170|gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
 gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2 [Arachis diogoi]
          Length = 121

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   +++   +    L E E+I +R  + 
Sbjct: 2   ARVGGVEIPNNKRIEFSLQYIHGIGRSRARKILCDISMD-NKVTKDLSEEELITLRDEVS 60

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           + Y +EGDLRR  A+NI+RL ++ CYRG+RH +GLP RGQRT  N RT K        +K
Sbjct: 61  K-YVIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKK 119

Query: 122 R 122
           +
Sbjct: 120 K 120


>gi|156743924|ref|YP_001434053.1| 30S ribosomal protein S13 [Roseiflexus castenholzii DSM 13941]
 gi|189044291|sp|A7NR39|RS13_ROSCS RecName: Full=30S ribosomal protein S13
 gi|156235252|gb|ABU60035.1| ribosomal protein S13 [Roseiflexus castenholzii DSM 13941]
          Length = 127

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 59/100 (59%), Positives = 75/100 (75%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR K +  A+ YI GIG  +  D+  K  + P  RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRNKTIEIAITYIFGIGRSNGADVLRKANVNPATRVRDLTEEEVSRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+GLPVRG
Sbjct: 61  EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGLPVRG 100


>gi|78211907|ref|YP_380686.1| 30S ribosomal protein S13 [Synechococcus sp. CC9605]
 gi|123578843|sp|Q3AMQ1|RS13_SYNSC RecName: Full=30S ribosomal protein S13
 gi|78196366|gb|ABB34131.1| ribosomal protein S13 [Synechococcus sp. CC9605]
          Length = 121

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  +L YI+G+G   SQ I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRGAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  E-NYTVEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|225621049|ref|YP_002722307.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
 gi|225215869|gb|ACN84603.1| 30S ribosomal protein S13 [Brachyspira hyodysenteriae WA1]
          Length = 125

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 2/120 (1%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
            GV I   KR+  AL  I+GIG   +  IC+K  I    +   L ++++  +R AIE   
Sbjct: 1   MGVEIRNNKRIEIALTDIYGIGRTLAHVICDKANIDYSIKAKDLTDAQITALRDAIEATT 60

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG--KGGVARKR 122
           +VEGDLR  +  NIKRL D+  YRG+RH + LPV GQRT TN+R  +  G  K    +K+
Sbjct: 61  KVEGDLRTELYNNIKRLKDIHSYRGMRHIKRLPVHGQRTRTNSRNARGGGARKAIAGKKK 120


>gi|54606697|dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
 gi|54606741|dbj|BAD66764.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
          Length = 116

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/116 (43%), Positives = 74/116 (63%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   K+V  A   I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART RKK  K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKKIRK 116


>gi|260435148|ref|ZP_05789118.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109]
 gi|260413022|gb|EEX06318.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8109]
          Length = 121

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  +L YI+G+G   SQ I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARIAGVDIPRDKRIEVSLTYIYGVGLTRSQAILAKTGVNPDIRVKDLEDGDLQKLRNAM 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EE-YTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|159792882|gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]
          Length = 116

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|123966952|ref|YP_001012033.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515]
 gi|158706262|sp|A2BYR5|RS13_PROM5 RecName: Full=30S ribosomal protein S13
 gi|123201318|gb|ABM72926.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9515]
          Length = 121

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+GIG   S+ I +   + P+ RV  L +S+V ++R   
Sbjct: 1   MARIAGIDIPREKRVEIALTYIYGIGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLR-VA 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +D+ VEGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 60  AEDFTVEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|24636948|gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna]
          Length = 116

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/112 (41%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|242624285|ref|YP_003002203.1| 30S ribosomal protein S13 [Aureoumbra lagunensis]
 gi|239997393|gb|ACS36915.1| 30S ribosomal protein S13 [Aureoumbra lagunensis]
          Length = 116

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/101 (50%), Positives = 65/101 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P +KRV  AL  I+GIG  SS+ I     I P +R+H L + E+  +R  I
Sbjct: 1   MVRIAGVDLPNSKRVEYALTSIYGIGLTSSRSILAAANIDPNKRMHTLEDQELSVLRAVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E +Y+VE DLRR +  NI RL  + C RG RHR  LPVRGQ
Sbjct: 61  EDNYKVEDDLRRLIKQNIVRLSQINCVRGRRHRASLPVRGQ 101


>gi|87124984|ref|ZP_01080831.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917]
 gi|86167304|gb|EAQ68564.1| 30S ribosomal protein S13 [Synechococcus sp. RS9917]
          Length = 121

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGPTRARTILSKTGVNPDIRVKDLDDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  Y +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-YTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|302763467|ref|XP_002965155.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii]
 gi|300167388|gb|EFJ33993.1| hypothetical protein SELMODRAFT_167206 [Selaginella moellendorffii]
          Length = 166

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G  +++ I    A+   +R   L ++E+ +IR  + 
Sbjct: 44  ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 102

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + Y +EGDLRR   + I  L+++ CYRG RH+ GLPVRGQRT  NARTR
Sbjct: 103 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 150


>gi|159904198|ref|YP_001551542.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211]
 gi|226712777|sp|A9BCM6|RS13_PROM4 RecName: Full=30S ribosomal protein S13
 gi|159889374|gb|ABX09588.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9211]
          Length = 121

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+G+G   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGIDIPREKRVEVALTYIYGVGLTRAKSILAKAGVNPDIRVKDLDDGDVQKLRTAV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  ES-FTLEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|161616444|ref|YP_001590409.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365808|gb|ABX69576.1| hypothetical protein SPAB_04259 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|321226469|gb|EFX51519.1| SSU ribosomal protein S13p S18e [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 103

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/102 (51%), Positives = 69/102 (67%), Gaps = 1/102 (0%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           + AL  I+G+G   S+ I     I    ++ +L E ++  +R  + + + VEGDLRR ++
Sbjct: 1   MIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREIS 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 60  MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101


>gi|284794742|ref|YP_003412095.1| ribosomal protein S13 [Phaeoceros laevis]
 gi|254596062|gb|ACT75303.1| ribosomal protein S13 [Phaeoceros laevis]
          Length = 122

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/113 (42%), Positives = 72/113 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G N    K +  AL  I GIG K +  +C +L +    RV++L   ++ +I + I
Sbjct: 1   MSYILGTNSISNKLIRIALIQIFGIGPKKAIQLCYRLGLSDNIRVNKLTSYQIDKIIKII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            Q+Y V+ +L+  +  +IKRL+ +GCYRG RH  GLP+RGQRTHTNA+T ++F
Sbjct: 61  SQNYLVDSELKTVIQRDIKRLISIGCYRGFRHNAGLPLRGQRTHTNAKTCRRF 113


>gi|116072179|ref|ZP_01469447.1| 30S ribosomal protein S13 [Synechococcus sp. BL107]
 gi|116065802|gb|EAU71560.1| 30S ribosomal protein S13 [Synechococcus sp. BL107]
          Length = 121

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   ++ I  K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|116075746|ref|ZP_01473005.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916]
 gi|116067061|gb|EAU72816.1| 30S ribosomal protein S13 [Synechococcus sp. RS9916]
          Length = 121

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I ++  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGPTRARTILSQTGVNPDTRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  E-GFTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|148655313|ref|YP_001275518.1| 30S ribosomal protein S13 [Roseiflexus sp. RS-1]
 gi|166231922|sp|A5USG5|RS13_ROSS1 RecName: Full=30S ribosomal protein S13
 gi|148567423|gb|ABQ89568.1| SSU ribosomal protein S13P [Roseiflexus sp. RS-1]
          Length = 127

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/102 (58%), Positives = 78/102 (76%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++PR KR+  A+ YI GIG  +  ++  K  + P  RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDLPRNKRIEIAITYIFGIGRSNGAEVLRKANVNPATRVRDLTEEEVSRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           E++Y+VEGDLRR + MNIKRLMD+GCYRGLRHR+G+PVRGQR
Sbjct: 61  EREYRVEGDLRREIQMNIKRLMDIGCYRGLRHRKGMPVRGQR 102


>gi|124024017|ref|YP_001018324.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303]
 gi|158706261|sp|A2CC49|RS13_PROM3 RecName: Full=30S ribosomal protein S13
 gi|123964303|gb|ABM79059.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9303]
          Length = 121

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSGVNPDIRVKDLEDGDVQKLRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|254509449|ref|ZP_05121527.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16]
 gi|219547622|gb|EED24669.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus 16]
          Length = 103

 Score =  141 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           + AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  + + Y VEGDLRR V+
Sbjct: 1   MIALTSIYGIGKTRSQAILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVS 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 60  MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 101


>gi|54020093|ref|YP_115724.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 232]
 gi|71893522|ref|YP_278968.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J]
 gi|72080509|ref|YP_287567.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448]
 gi|81378720|sp|Q601J1|RS13_MYCH2 RecName: Full=30S ribosomal protein S13
 gi|123645173|sp|Q4A8J5|RS13_MYCH7 RecName: Full=30S ribosomal protein S13
 gi|123645895|sp|Q4AAG4|RS13_MYCHJ RecName: Full=30S ribosomal protein S13
 gi|53987266|gb|AAV27467.1| 30s ribosomal protein S13 [Mycoplasma hyopneumoniae 232]
 gi|71851649|gb|AAZ44257.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae J]
 gi|71913633|gb|AAZ53544.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 7448]
          Length = 137

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 14/134 (10%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47
           MAR+  V IP  KR+V ALC I GIG   + +I  K A             +    +V +
Sbjct: 1   MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQEEKFGKKFPILTENTKVKE 60

Query: 48  LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           + E  +  IR  + + Y+ EGDL R V  NIKRL+++ CYRG+RHR+GLPVRGQ T  NA
Sbjct: 61  INEEVLQVIRD-VAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119

Query: 108 RTRKKFGKGGVARK 121
           RTRK   K  +A+K
Sbjct: 120 RTRKGPRKTIMAKK 133


>gi|33241140|ref|NP_876082.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81663961|sp|Q7V9Y3|RS13_PROMA RecName: Full=30S ribosomal protein S13
 gi|33238670|gb|AAQ00735.1| Ribosomal protein S13 [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 121

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG+++PR KRV  AL YI+GIG   +Q+I  K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGIDLPRDKRVEIALTYIYGIGLTRAQNILAKTGVNPDIRVKDLEDGDVQKLRAAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|33866620|ref|NP_898179.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102]
 gi|81573912|sp|Q7U4H9|RS13_SYNPX RecName: Full=30S ribosomal protein S13
 gi|33633398|emb|CAE08603.1| 30S ribosomal protein S13 [Synechococcus sp. WH 8102]
          Length = 121

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+G+G   ++ I  +  + P+ RV  L + ++ ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGVGPTRARTILAQTGVSPDIRVKDLEDGDLQKLRNA- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             D+ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 60  ADDFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|148238749|ref|YP_001224136.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803]
 gi|158706290|sp|A5GIS4|RS13_SYNPW RecName: Full=30S ribosomal protein S13
 gi|147847288|emb|CAK22839.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7803]
          Length = 121

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   +Q I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGLTRAQTILSKTGVNPDTRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|295311659|ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
 gi|259156787|gb|ACV96649.1| ribosomal protein S13 [Citrullus lanatus]
          Length = 116

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      K+V  AL  I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|24636950|gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata]
          Length = 116

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G ++   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGASLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|113953764|ref|YP_729646.1| 30S ribosomal protein S13 [Synechococcus sp. CC9311]
 gi|123031877|sp|Q0ID26|RS13_SYNS3 RecName: Full=30S ribosomal protein S13
 gi|113881115|gb|ABI46073.1| ribosomal protein S13 [Synechococcus sp. CC9311]
          Length = 121

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I  K  + P+ RV  L +++V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGSTRAKTILTKAGVNPDIRVKDLEDNDVQKLRNAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  ES-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|78185543|ref|YP_377977.1| 30S ribosomal protein S13 [Synechococcus sp. CC9902]
 gi|123581060|sp|Q3AW72|RS13_SYNS9 RecName: Full=30S ribosomal protein S13
 gi|78169837|gb|ABB26934.1| SSU ribosomal protein S13P [Synechococcus sp. CC9902]
          Length = 121

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  +L YI+GIG   ++ I  K  + P+ RV  L + ++ ++R A 
Sbjct: 1   MARIAGVDIPRDKRVEVSLTYIYGIGLTRAKAILAKAGVNPDIRVKDLEDGDIQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|19075537|ref|NP_588037.1| mitochondrial ribosomal protein subunit S37 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74654640|sp|O59772|SWS2_SCHPO RecName: Full=37S ribosomal protein subunit sws2, mitochondrial
 gi|3080512|emb|CAA18642.1| mitochondrial ribosomal protein subunit S37 (predicted)
           [Schizosaccharomyces pombe]
          Length = 151

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV +   K V  AL   +GIG   +++IC KL+     RV +L   ++  + Q +
Sbjct: 1   MVYILGVAVNDDKPVRFALLSFYGIGHAKAEEICAKLSFHNTLRVRELTNVQLTTLSQLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +EGDLRR    +I RL+++ CYRG+RH  GLPV GQ T TNA+T KK  K
Sbjct: 61  S-GMTIEGDLRRQRNADISRLVNIRCYRGMRHVNGLPVNGQNTRTNAKTAKKLNK 114


>gi|24636952|gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus]
          Length = 116

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/112 (41%), Positives = 72/112 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  + RR    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWEWRRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|94502651|ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|40795090|gb|AAR91134.1| ribosomal protein S13 [Zea mays]
          Length = 116

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  AL  + GIG K +  +C +L I    ++H+L + ++ QI Q I
Sbjct: 1   MLYISGARLLPDEQVRIALTKMDGIGPKKAIQLCYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTARK 112


>gi|295311703|ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo]
 gi|259156831|gb|ACV96692.1| ribosomal protein S13 [Cucurbita pepo]
          Length = 116

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/112 (44%), Positives = 73/112 (65%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  I GIG K +  +C +L I    ++ +L +S++ QI Q I
Sbjct: 1   MPYISGARLVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R++ L CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHIVHWELKRGERADIERVISLSCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|72382946|ref|YP_292301.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL2A]
 gi|91207715|sp|Q46IT0|RS13_PROMT RecName: Full=30S ribosomal protein S13
 gi|72002796|gb|AAZ58598.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. NATL2A]
          Length = 121

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G++IPR KRV  AL YI+GIG   +Q I  K  + P+ RV  L +S++ ++R A+
Sbjct: 1   MARISGIDIPREKRVEVALTYIYGIGLTRAQSILEKSGVNPDIRVKDLEDSDIQKLR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +++ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 60  TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|163847947|ref|YP_001635991.1| 30S ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl]
 gi|222525827|ref|YP_002570298.1| 30S ribosomal protein S13 [Chloroflexus sp. Y-400-fl]
 gi|189040495|sp|A9WH90|RS13_CHLAA RecName: Full=30S ribosomal protein S13
 gi|254811139|sp|B9LJF6|RS13_CHLSY RecName: Full=30S ribosomal protein S13
 gi|163669236|gb|ABY35602.1| ribosomal protein S13 [Chloroflexus aurantiacus J-10-fl]
 gi|222449706|gb|ACM53972.1| ribosomal protein S13 [Chloroflexus sp. Y-400-fl]
          Length = 127

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/102 (61%), Positives = 81/102 (79%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  A+ YI+GIG  +  +I  K  + PERRV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKKIEIAITYIYGIGRSNGMEILRKANVNPERRVRDLTEEEVGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102


>gi|302757637|ref|XP_002962242.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii]
 gi|300170901|gb|EFJ37502.1| hypothetical protein SELMODRAFT_140847 [Selaginella moellendorffii]
          Length = 163

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHG+G  +++ I    A+   +R   L ++E+ +IR  + 
Sbjct: 41  ARVGGVEIPNNKRIESSLQYIHGVGQTTARQILLDCAMD-NKRTKDLSDAELTKIRDELG 99

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           + Y +EGDLRR   + I  L+++ CYRG RH+ GLPVRGQRT  NARTR
Sbjct: 100 K-YMIEGDLRRFNQLAINHLIEIQCYRGKRHQAGLPVRGQRTKNNARTR 147


>gi|300782635|ref|YP_003762926.1| 30S ribosomal protein S13 [Amycolatopsis mediterranei U32]
 gi|299792149|gb|ADJ42524.1| small subunit ribosomal protein S13 [Amycolatopsis mediterranei
           U32]
          Length = 112

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 69/103 (66%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           +  AL YI+GIG   S+ +     +  + RV  L + ++ ++R  IE++++VEGDLRR V
Sbjct: 1   MEIALTYIYGIGRTRSKQLIKAAELNADTRVKDLSDDDLAKLRVYIEENFKVEGDLRREV 60

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
             +I+R +++GCY GLR RRGLPVRGQRT TNARTRK   K  
Sbjct: 61  NADIRRKIEIGCYEGLRWRRGLPVRGQRTKTNARTRKGPKKTV 103


>gi|18417346|ref|NP_568299.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis
           thaliana]
 gi|1173194|sp|P42732|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName:
           Full=CS13; Flags: Precursor
 gi|16767|emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana]
 gi|662869|emb|CAA88028.1| chloroplast ribosomal protein S13 [Arabidopsis thaliana]
 gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
 gi|1515107|emb|CAA60413.1| plastid ribosomal protein S13 [Arabidopsis thaliana]
 gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110 [Arabidopsis thaliana]
 gi|15450549|gb|AAK96452.1| AT5g14320/F18O22_110 [Arabidopsis thaliana]
 gi|332004633|gb|AED92016.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
          Length = 169

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +   +    + E E+I +R  + 
Sbjct: 48  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           + Y +EGDLRR  A+ IKRL ++ CYRG+RH +GLP RGQRT  N RT
Sbjct: 107 K-YMIEGDLRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 153


>gi|33864020|ref|NP_895580.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313]
 gi|81576938|sp|Q7V525|RS13_PROMM RecName: Full=30S ribosomal protein S13
 gi|33635604|emb|CAE21928.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9313]
          Length = 121

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KRV  AL YI+GIG   ++ I  K  + P+ RV  L + +V ++R A+
Sbjct: 1   MARIAGVDIPRDKRVEVALTYIYGIGLTRAKTILTKSDVNPDIRVKDLEDGDVQKLRTAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|219849863|ref|YP_002464296.1| 30S ribosomal protein S13 [Chloroflexus aggregans DSM 9485]
 gi|254811138|sp|B8G6Q1|RS13_CHLAD RecName: Full=30S ribosomal protein S13
 gi|219544122|gb|ACL25860.1| ribosomal protein S13 [Chloroflexus aggregans DSM 9485]
          Length = 126

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 63/102 (61%), Positives = 80/102 (78%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  A+ YI+GIG  +  D+  K  + P RRV  L E EV +IR+ I
Sbjct: 1   MARIAGVDIPRNKKIEIAITYIYGIGRSNGMDVLRKANVDPNRRVRDLTEEEVGRIREII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102


>gi|312601094|gb|ADQ90349.1| 30S ribosomal protein S13 [Mycoplasma hyopneumoniae 168]
          Length = 137

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 14/134 (10%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-------------IPPERRVHQ 47
           MAR+  V IP  KR+V ALC I GIG   + +I  K A             +    +V +
Sbjct: 1   MARVLNVEIPNHKRIVIALCSIFGIGKSLATEIVEKTAKLQKEKFGKKFPILTENTKVKE 60

Query: 48  LVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           + E  +  IR  + + Y+ EGDL R V  NIKRL+++ CYRG+RHR+GLPVRGQ T  NA
Sbjct: 61  INEEVLQVIRD-VAKTYKTEGDLHREVQSNIKRLIEIKCYRGIRHRKGLPVRGQVTQKNA 119

Query: 108 RTRKKFGKGGVARK 121
           RTRK   K  +A+K
Sbjct: 120 RTRKGPRKTIMAKK 133


>gi|296105006|ref|YP_003615152.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295059465|gb|ADF64203.1| ribosomal protein S13p [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 103

 Score =  140 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 1/102 (0%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           + AL  I+GIG   S+ I     I  + ++ +L E ++  +R  + + + VEGDLRR ++
Sbjct: 1   MIALTSIYGIGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREIS 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 60  MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPI 101


>gi|309789646|ref|ZP_07684227.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6]
 gi|308228382|gb|EFO82029.1| hypothetical protein OSCT_0178 [Oscillochloris trichoides DG6]
          Length = 126

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/102 (59%), Positives = 79/102 (77%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR K++  ++ YI GIG  +  D+  K  + PE RV  L E EV +IR+ +
Sbjct: 1   MARIAGVDIPRNKKIEISIRYIFGIGPSNGLDVLRKANVNPETRVRDLTEEEVGRIREIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           +++Y+VEGDLRR V +NIKRLMD+GCYRGLRHRRG+PVRGQR
Sbjct: 61  DREYRVEGDLRREVQLNIKRLMDIGCYRGLRHRRGMPVRGQR 102


>gi|33862093|ref|NP_893654.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81575584|sp|Q7UZW4|RS13_PROMP RecName: Full=30S ribosomal protein S13
 gi|33634311|emb|CAE19996.1| 30S ribosomal protein S13 [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 121

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL YI+G+G   S+ I +   + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYIYGVGLTRSKLILSNTGVNPDIRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E D+ VEGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  E-DFTVEGDLRRKEGMAMKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|296085211|emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 772 ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 831

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 832 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 891

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 892 RGQHTKTTGRRGKTV---GVSKKR 912


>gi|86279741|gb|ABC94524.1| 30S ribosomal protein S13 [Chroomonas mesostigmatica]
          Length = 101

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV++P+ KRV  AL YI+GIG  +SQ I +K  +  + R   L +S+V+ IR+ I
Sbjct: 1   MARIAGVDLPKNKRVEIALTYIYGIGLSTSQSILSKANVSFDVRCKDLEDSDVMTIREII 60

Query: 61  EQDYQVEGDLRRTV-AMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y VEG  +R + ++NIKRLM++ C RG RHR GLP+RG
Sbjct: 61  DEEYPVEGAAKREIESLNIKRLMEVNCIRGRRHRAGLPLRG 101


>gi|124026688|ref|YP_001015803.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A]
 gi|158706260|sp|A2C4X9|RS13_PROM1 RecName: Full=30S ribosomal protein S13
 gi|123961756|gb|ABM76539.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. NATL1A]
          Length = 121

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G++IPR KRV  AL YI+GIG   +Q I  K  + P+ RV  L + ++ ++R A+
Sbjct: 1   MARISGIDIPREKRVEVALTYIYGIGLTRAQAILEKSGVNPDIRVKDLDDGDIQKLR-AV 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            +++ +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 60  TEEFTLEGDLRRQEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|126697067|ref|YP_001091953.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301]
 gi|157414142|ref|YP_001485008.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215]
 gi|254526937|ref|ZP_05138989.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202]
 gi|158706259|sp|A3PF27|RS13_PROM0 RecName: Full=30S ribosomal protein S13
 gi|166991601|sp|A8G741|RS13_PROM2 RecName: Full=30S ribosomal protein S13
 gi|126544110|gb|ABO18352.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9301]
 gi|157388717|gb|ABV51422.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9215]
 gi|221538361|gb|EEE40814.1| ribosomal protein S13p/S18e [Prochlorococcus marinus str. MIT 9202]
          Length = 121

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|88807906|ref|ZP_01123417.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805]
 gi|88787945|gb|EAR19101.1| 30S ribosomal protein S13 [Synechococcus sp. WH 7805]
          Length = 121

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAGV+IPR KR+  AL YI+GIG   ++ I +K  + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGVDIPRDKRIEVALTYIYGIGLTRAKTILSKTGVNPDIRVKDLEDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E  + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    +
Sbjct: 61  EA-FTIEGDLRRQEGMALKRLQDIGCLRGRRHRMSLPVRGQRTRTNARTRRGARKTVAGK 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|78780014|ref|YP_398126.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. MIT 9312]
 gi|91207714|sp|Q318K5|RS13_PROM9 RecName: Full=30S ribosomal protein S13
 gi|78713513|gb|ABB50690.1| SSU ribosomal protein S13P [Prochlorococcus marinus str. MIT 9312]
          Length = 121

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/122 (52%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L +S+V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANAGVNPDIRVKDLSDSDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|328772175|gb|EGF82214.1| hypothetical protein BATDEDRAFT_10132 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 142

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN+P  K V  AL  ++G+G K+ + IC+KL I P+ R+  L ES+V Q+ Q +
Sbjct: 1   MLYLLGVNLPDEKLVHIALTSVYGVGRKTGEQICHKLLIHPQCRLKDLPESKVTQLSQLL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
                +E +LRR    NIK L+D+G YRG+RH+ GLPV GQRT +NA T K+  
Sbjct: 61  -NTMTIEAELRRQTEENIKSLVDMGTYRGMRHKAGLPVNGQRTRSNASTAKRLN 113


>gi|194246757|ref|YP_002004396.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali]
 gi|254811160|sp|B3R015|RS13_PHYMT RecName: Full=30S ribosomal protein S13
 gi|193807114|emb|CAP18552.1| 30S ribosomal protein S13 [Candidatus Phytoplasma mali]
          Length = 127

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/118 (56%), Positives = 79/118 (66%), Gaps = 2/118 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA-IPPERRVHQLVESEVIQIRQA 59
           MARIAGV IP  KRVV AL YI GIG K +Q+I + L  I    +V  L E  +I IR  
Sbjct: 1   MARIAGVEIPSNKRVVIALTYIRGIGIKKAQNILSDLKEIDINTKVEDLKEQHLIAIRNK 60

Query: 60  IEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           I+  +Y VEGDL+R VA+NIKRLM+ G YRGLRHR+GLP RGQ T  NART K   + 
Sbjct: 61  IQNGNYLVEGDLKREVALNIKRLMENGSYRGLRHRKGLPSRGQNTRNNARTIKGKRRT 118


>gi|189095415|ref|YP_001936428.1| ribosomal protein S13 [Heterosigma akashiwo]
 gi|157694758|gb|ABV66034.1| 30S ribosomal protein S13 [Heterosigma akashiwo]
 gi|157777989|gb|ABV70175.1| 30S ribosomal protein S13 [Heterosigma akashiwo]
          Length = 122

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/122 (44%), Positives = 81/122 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAGV++P  K+++ +L  ++GIG  +++ I  K  +  E R  +L +  V  IR  +
Sbjct: 1   MVRIAGVDLPSQKKILYSLTAVYGIGLHTAKKILEKAKVDSEIRTFELDDDSVGNIRSVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E +Y VEGDLR+  ++NI RL+ + C+RG RHR+GLP+RGQRT TNARTR+   K    +
Sbjct: 61  EDNYTVEGDLRKLKSLNINRLVSINCFRGKRHRQGLPLRGQRTRTNARTRRGSKKTMAGK 120

Query: 121 KR 122
           K+
Sbjct: 121 KK 122


>gi|86279737|gb|ABC94521.1| 30S ribosomal protein S13 [Hanusia phi]
          Length = 100

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/100 (49%), Positives = 69/100 (69%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARI+G+++P+ KR+  AL YI+G+G  SSQ I  K  I   +R   L ++E+  IR  I
Sbjct: 1   MARISGIDLPKNKRIEIALTYIYGVGLSSSQKILEKANIDANKRCRDLDDNEISLIRSII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +++Y VEG  +R  +MNIKRLM++ C RG RHR GLP+RG
Sbjct: 61  DENYPVEGAAKRIESMNIKRLMEINCIRGKRHRLGLPLRG 100


>gi|56791641|gb|AAW30358.1| ribosomal protein S13 [Lonicera sp. Bergthorsson 0301]
          Length = 107

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/106 (40%), Positives = 69/106 (65%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G  +   ++V  +L  I+GIG K +  +C +L I    ++ +L + ++ Q+ Q I QD+ 
Sbjct: 2   GARLVDNEQVRISLTKIYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMIGQDHV 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +
Sbjct: 62  VHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCR 107


>gi|123969277|ref|YP_001010135.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601]
 gi|158706263|sp|A2BTB7|RS13_PROMS RecName: Full=30S ribosomal protein S13
 gi|123199387|gb|ABM71028.1| 30S ribosomal protein S13 [Prochlorococcus marinus str. AS9601]
          Length = 121

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MARIAG++IPR KRV  AL Y++GIG   S+ I     + P+ RV  L + +V ++R A 
Sbjct: 1   MARIAGIDIPREKRVEIALTYVYGIGLTRSKLILANTGVNPDTRVKDLSDGDVQKLRGAT 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           E+ + +EGDLRR   M +KRL D+GC RG RHR  LPVRGQRT TNARTR+   K    R
Sbjct: 61  EE-FTLEGDLRRKEGMALKRLQDIGCVRGRRHRMSLPVRGQRTRTNARTRRGSRKTVAGR 119

Query: 121 KR 122
           K+
Sbjct: 120 KK 121


>gi|321310956|ref|YP_004193285.1| 30S ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1]
 gi|319802800|emb|CBY93446.1| ribosomal protein S13 [Mycoplasma haemofelis str. Langford 1]
          Length = 155

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 75/151 (49%), Gaps = 30/151 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP------------------- 41
           M RI GV+IP  K +  AL  I+G+GF +S+ I  K                        
Sbjct: 1   MPRILGVDIPNNKTLYAALTSIYGVGFSTSRKIIQKAFFNEIKPLNKLSKKEKGELDKVL 60

Query: 42  ERRVHQLVESEVIQIRQAIEQ-----------DYQVEGDLRRTVAMNIKRLMDLGCYRGL 90
             RV  L +  +  I Q I             ++  EGDLR+ V+ NIK L+++ CY G+
Sbjct: 61  RMRVKDLTKDNLSTISQTILNLQNNEEKYIYHEFLFEGDLRKKVSDNIKNLVEINCYVGI 120

Query: 91  RHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           RH+RGLPVRGQRT TNARTRK   K    +K
Sbjct: 121 RHKRGLPVRGQRTRTNARTRKGPRKTVANKK 151


>gi|11466521|ref|NP_044770.1| ribosomal protein S13 [Reclinomonas americana]
 gi|2258351|gb|AAD11885.1| ribosomal protein S13 [Reclinomonas americana]
          Length = 122

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 76/115 (66%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G+NI   K++  AL  I+G+G K   ++C+ + + P+ ++  L ES++ ++   I
Sbjct: 1   MIHLFGININSNKKIPFALKAIYGLGNKKVDELCSYMGLNPKLKMSDLNESQISKLCHYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           E+++ +E +LR+    NIKRL+D+  YRGLRH  GLPV GQRTHTNA+T+K   K
Sbjct: 61  EENFLIESELRKNQTYNIKRLLDIKSYRGLRHAYGLPVHGQRTHTNAKTQKSLSK 115


>gi|326522883|dbj|BAJ88487.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  AL  IHGIG   ++ I ++L +   +    L + E++ +R+ I +
Sbjct: 61  RIGGVVIPNDKRVEYALQSIHGIGRARARQILSELNL-ENKVTKDLSKEEIMALREGIAK 119

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            Y +E DLRR  +  ++RL  + CYRG+RH   LPVRGQRT TN RTRK
Sbjct: 120 -YMIEADLRRFKSAAVERLEGIRCYRGIRHADALPVRGQRTKTNGRTRK 167


>gi|242620059|ref|YP_003002063.1| 30S ribosomal protein S13 [Aureococcus anophagefferens]
 gi|239997304|gb|ACS36827.1| 30S ribosomal protein S13 [Aureococcus anophagefferens]
          Length = 116

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/101 (44%), Positives = 68/101 (67%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+G+++P +KR+  AL  ++GIG  +S+ I     I P +R + L ++EV+ +R+ I
Sbjct: 1   MVRISGIDLPNSKRIEYALTSVYGIGLTTSRSILAVADIDPSKRTNVLGDTEVMALREVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E++Y+VE DLRR    NI RL  + C +G RHR+ LPVRGQ
Sbjct: 61  EENYKVEEDLRRQTKQNIVRLSQINCVKGRRHRQNLPVRGQ 101


>gi|14591411|ref|NP_143491.1| 30S ribosomal protein S13P [Pyrococcus horikoshii OT3]
 gi|6226061|sp|O74021|RS13_PYRHO RecName: Full=30S ribosomal protein S13P
 gi|3258070|dbj|BAA30753.1| 148aa long hypothetical 30S ribosomal protein S13 [Pyrococcus
           horikoshii OT3]
          Length = 148

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL          +  +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVSHGIPRWAVNRPKDYETGKDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV++K+
Sbjct: 127 RGQRTRSNFRRGQTV---GVSKKK 147


>gi|282891931|ref|ZP_06300410.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498191|gb|EFB40531.1| hypothetical protein pah_c200o092 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 104

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/103 (49%), Positives = 66/103 (64%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIK 79
            YI+G+G + + +I  KL + P  R H+L E E+  I   ++  Y VEGDL+R V  NIK
Sbjct: 2   TYIYGLGRRLANEIIAKLGLDPNMRAHKLTEDEIASINALLQSQYVVEGDLKRQVQNNIK 61

Query: 80  RLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           RL+ +  YRG RHR GLPVRGQRT TNARTRK   K    +K+
Sbjct: 62  RLISIHSYRGQRHRVGLPVRGQRTRTNARTRKGRRKTVANKKK 104


>gi|57013930|ref|YP_173403.1| ribosomal protein S13 [Nicotiana tabacum]
 gi|134063|sp|P05488|RT13_TOBAC RecName: Full=Ribosomal protein S13, mitochondrial
 gi|13150|emb|CAA27645.1| unnamed protein product [Nicotiana tabacum]
          Length = 116

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/115 (39%), Positives = 70/115 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARLVGDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K  +
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTCRKLIR 115


>gi|323649892|ref|YP_004237265.1| ribosomal protein S13 [Ricinus communis]
 gi|322394272|gb|ADW96029.1| ribosomal protein S13 [Ricinus communis]
          Length = 116

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 72/115 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ ++ Q I
Sbjct: 1   MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ GLP+RGQRTHTNART +K  +
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIR 115


>gi|323398665|ref|YP_004222740.1| ribosomal protein S13 [Glaucocystis nostochinearum]
 gi|321401358|gb|ADW83112.1| ribosomal protein S13 [Glaucocystis nostochinearum]
          Length = 116

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 69/113 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +P +K+V  +L  I+GI  K +  IC+KL      ++ +L    ++ + Q +
Sbjct: 1   MLYILGFFLPSSKKVRYSLTSIYGINKKLTNKICSKLLFHNNLKIKELTAECILLLTQEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           ++ Y +   L+++V  NI  L+ +  YRG+RH  G PVRGQRTHTN++T+K+F
Sbjct: 61  DKHYLIGSKLKKSVFDNINCLIKINSYRGIRHSLGYPVRGQRTHTNSKTKKRF 113


>gi|11276604|pir||T48605 ribosomal protein S13-like protein F18O22.110 [imported] -
           Arabidopsis thaliana
 gi|7573457|emb|CAB87771.1| ribosomal protein precursor-like [Arabidopsis thaliana]
          Length = 197

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 17/123 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +   +    + E E+I +R  + 
Sbjct: 61  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 119

Query: 62  QDYQVEGDL---------------RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTN 106
           + Y +EGDL               RR  A+ IKRL ++ CYRG+RH +GLP RGQRT  N
Sbjct: 120 K-YMIEGDLAFVNELLICVVDVVQRRFNALAIKRLKEIQCYRGVRHIQGLPCRGQRTKNN 178

Query: 107 ART 109
            RT
Sbjct: 179 CRT 181


>gi|18978022|ref|NP_579379.1| 30S ribosomal protein S13P [Pyrococcus furiosus DSM 3638]
 gi|32363354|sp|Q8U0E2|RS13_PYRFU RecName: Full=30S ribosomal protein S13P
 gi|18893805|gb|AAL81774.1| SSU ribosomal protein S13P [Pyrococcus furiosus DSM 3638]
          Length = 148

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   DL          +  +I RL  +  YRG+RH  GLPV
Sbjct: 67  ADPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147


>gi|14520743|ref|NP_126218.1| 30S ribosomal protein S13P [Pyrococcus abyssi GE5]
 gi|32363436|sp|Q9V1A0|RS13_PYRAB RecName: Full=30S ribosomal protein S13P
 gi|5457959|emb|CAB49449.1| rps13P SSU ribosomal protein S13P/S18E [Pyrococcus abyssi GE5]
          Length = 148

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + +V +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQVKKIEEIL 66

Query: 61  E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL          +  +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVAHGIPRWAVNRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 127 RGQRTRSNFRRGQTV---GVSRKK 147


>gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus carota]
          Length = 116

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      K+V  A   ++GIG K +  +  +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|150406483|ref|YP_001315132.1| ribosomal protein S13 [Chlorokybus atmophyticus]
 gi|126507720|gb|ABO15117.1| ribosomal protein S13 [Chlorokybus atmophyticus]
          Length = 121

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+    ++    K++  AL  + GIG   S  IC++L       V QL +S++ ++ + +
Sbjct: 1   MSYNLQIDFYSKKKIRIALRQLFGIGPSLSNQICDQLGFSENTTVDQLSKSQIDRLTRLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGKGGVA 119
            Q Y    +LRR ++ +IKR + +GCYRG RH   LP+RGQRTH+NART RK+  +   A
Sbjct: 61  NQQYFTGPELRRLISQDIKRFIRIGCYRGFRHNDALPLRGQRTHSNARTCRKRLNRSTYA 120

Query: 120 R 120
           R
Sbjct: 121 R 121


>gi|332157867|ref|YP_004423146.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
 gi|331033330|gb|AEC51142.1| 30S ribosomal protein S13P [Pyrococcus sp. NA2]
          Length = 148

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I G+G   +  +C    + P  +   L + ++ +I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTAIKGVGINFATMVCRVAGLDPFMKAGYLTDEQIKKIEEIL 66

Query: 61  E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +               +DY+   DL          +  +I RL  +  YRG+RH  GLPV
Sbjct: 67  QDPVAHGIPRWAVNRPKDYETGKDLHLITAKLEMAIREDIMRLRRIRAYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV +K+
Sbjct: 127 RGQRTRSNFRRGQTV---GVTKKK 147


>gi|330850864|ref|YP_004376614.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580]
 gi|328835684|dbj|BAK18980.1| 30S ribosomal protein S13 [Fistulifera sp. JPCC DA0580]
          Length = 123

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/123 (47%), Positives = 79/123 (64%), Gaps = 1/123 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+ GV++PR K++   L YIHGIG  S++ I     I  E RV+ L   +   +RQ +
Sbjct: 1   MVRLVGVDLPRNKKITYGLTYIHGIGLTSAKKIVELTNIDSETRVNDLTPEQAGLLRQTL 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
           E+ D Q+EGDLRR   +NIKRL ++ C+RG RHR  LPVRGQRT TNARTR+   K    
Sbjct: 61  EESDLQLEGDLRRFNGLNIKRLNEINCHRGKRHRNNLPVRGQRTRTNARTRRGSKKTVTG 120

Query: 120 RKR 122
           +K+
Sbjct: 121 KKK 123


>gi|224020963|ref|YP_002608196.1| ribosomal protein S13 [Carica papaya]
 gi|170522375|gb|ACB20485.1| ribosomal protein S13 [Carica papaya]
          Length = 116

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 70/115 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVANEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+R + + CYRG+RH+ G P+RGQRTHTNART +K  +
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRTHTNARTCRKLIR 115


>gi|168005006|ref|XP_001755202.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693795|gb|EDQ80146.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 133

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/125 (44%), Positives = 79/125 (63%), Gaps = 6/125 (4%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI GV +P  KR+  AL  IHG+G  +++ I   + +   +   +L E E+ +IR+ + 
Sbjct: 8   ARIEGVELPNKKRIETALQSIHGVGKTTARQILLTIGL-ENKVTSELSELELTKIREELS 66

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF----GKGG 117
            +Y +EG LRR  A+NI+RL+D+ CYRG RHR GLPVRGQRT  NARTRK+      +  
Sbjct: 67  -NYMIEGKLRRFNALNIQRLVDIQCYRGRRHRAGLPVRGQRTKCNARTRKRAVLGKKRVV 125

Query: 118 VARKR 122
             +K+
Sbjct: 126 AGKKK 130


>gi|328874052|gb|EGG22418.1| protein serine/threonine phosphatase [Dictyostelium fasciculatum]
          Length = 2108

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI---- 56
           + RI   N+   ++V+ AL  + G G + +  +C K  I   +R  +L  +E+ ++    
Sbjct: 389 IIRIYNTNVEGKRKVMYALTDVKGCGRRFANLVCKKADIDFSKRAGELSPAEIERVTTIM 448

Query: 57  ----------------RQAIEQDYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           R  ++  Y   +   L   +  +++RL  + C RG+RH  GL V
Sbjct: 449 NHPRQYNIPSWFLNRQRDIVDGKYMQALSNVLDIKLREDLERLKKIRCQRGIRHHLGLKV 508

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T T  R  +     GVA+K+
Sbjct: 509 RGQKTKTTGRRGRTV---GVAKKK 529


>gi|307103900|gb|EFN52157.1| hypothetical protein CHLNCDRAFT_27099 [Chlorella variabilis]
          Length = 135

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/116 (47%), Positives = 72/116 (62%), Gaps = 2/116 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI GV +P  K V  +L YI GIG  +++ I     +   +R   L E E+ ++R+ ++
Sbjct: 6   ARIGGVEVPNQKYVEYSLQYIFGIGHTTAKAILVTTGV-ENKRTKDLSEEELTRLREEVD 64

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           + Y VEGDLRR  A+NIKRL ++GCYRG RH   LPVRGQRT  NARTRK      
Sbjct: 65  R-YTVEGDLRRFNALNIKRLKEIGCYRGRRHYNNLPVRGQRTKNNARTRKGRNAAA 119


>gi|296109383|ref|YP_003616332.1| ribosomal protein S13P [Methanocaldococcus infernus ME]
 gi|295434197|gb|ADG13368.1| ribosomal protein S13P [Methanocaldococcus infernus ME]
          Length = 153

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  +I   K+V+ AL  I+GIG   ++ I     I P +    L + EV +I + ++ 
Sbjct: 14  RISRTDIDGNKKVIMALQDIYGIGEAMARAIVRVTNIDPNKLAGYLTDEEVKKIEEVLQD 73

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +EGDL      +I RL  + CYRG+RH  GLP RG
Sbjct: 74  PAKFGIPSWMFNRRKDYVTGEDKHVIEGDLIVVKQEDINRLKRIKCYRGIRHELGLPCRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+R++
Sbjct: 134 QRTKSTFRRGPTV---GVSRRK 152


>gi|224066875|ref|XP_002302257.1| predicted protein [Populus trichocarpa]
 gi|222843983|gb|EEE81530.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL YIHGIG K +  I  +L++   +    L   E+  +R+ + +
Sbjct: 33  RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSL-VNKPTKDLTGIELNSLREEVSK 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Y    DL R V  +++RL+D+ CYRG RH  GLP RGQRT TNARTRK+  K G
Sbjct: 92  -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145


>gi|254449327|ref|ZP_05062772.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015]
 gi|198261086|gb|EDY85386.1| ribosomal protein S13p/S18e [gamma proteobacterium HTCC5015]
          Length = 97

 Score =  131 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/96 (55%), Positives = 70/96 (72%), Gaps = 1/96 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           ++GIG   +  IC+   I P+ ++ +L + E+ ++R  + + + VEGDLRR V+MNIKRL
Sbjct: 1   MYGIGRTRAYSICDAAGIKPDAKIRELGDDEIEKLRTEVGK-FSVEGDLRREVSMNIKRL 59

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           MDLGCYRGLRHRRGLP+RGQRT TNARTRK   K  
Sbjct: 60  MDLGCYRGLRHRRGLPLRGQRTKTNARTRKGPRKPI 95


>gi|296411741|ref|XP_002835588.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629374|emb|CAZ79745.1| unnamed protein product [Tuber melanosporum]
          Length = 216

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 75  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTII 134

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 135 QNPTQYKIPTWFLNRQRDIIDGKDSQILANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 194

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 195 RGQHSKTTGRRGRTV---GVSKKK 215


>gi|253807635|gb|ACT36213.1| ribosomal protein S13 [Helicosporidium sp. ex Simulium jonesi]
          Length = 127

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/122 (32%), Positives = 67/122 (54%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I  VN   +K++ +AL  I+GIG   S  IC+ L + P   +      ++  + Q I
Sbjct: 1   MTYINNVNCSNSKKLYKALTKIYGIGTHHSLQICDSLGLCPHTLLGDCSPQQISSLSQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             +Y    ++RR +  N+++ + + CYRG RH +GLPVRGQRT +N +T +K  +  +  
Sbjct: 61  TSNYDTGVEIRRNIKENVQKYIKMACYRGFRHAQGLPVRGQRTRSNHKTVRKLSRLNLTG 120

Query: 121 KR 122
            +
Sbjct: 121 SK 122


>gi|118488715|gb|ABK96168.1| unknown [Populus trichocarpa]
          Length = 163

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 2/115 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    IP  K++  AL YIHGIG K +  I  +L++   +    L   E+  +R+ + +
Sbjct: 33  RVGNTEIPNDKKLEVALQYIHGIGRKRAHQILCELSL-VNKPTKDLTGIELNSLREEVSK 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            Y    DL R V  +++RL+D+ CYRG RH  GLP RGQRT TNARTRK+  K G
Sbjct: 92  -YLTGPDLARRVKADVQRLVDIECYRGYRHVEGLPCRGQRTSTNARTRKEHQKYG 145


>gi|57641441|ref|YP_183919.1| 30S ribosomal protein S13P [Thermococcus kodakarensis KOD1]
 gi|73917914|sp|Q5JJF1|RS13_PYRKO RecName: Full=30S ribosomal protein S13P
 gi|57159765|dbj|BAD85695.1| SSU ribosomal protein S13P [Thermococcus kodakarensis KOD1]
          Length = 149

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV+I   K+V  AL  I GIG   +  +     I P  +   L + +V +I + +
Sbjct: 8   IVRVAGVDIDGHKQVRWALTGIKGIGINFATMVLRVAGIDPFMKAGYLTDEQVKKIEEIL 67

Query: 61  E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   D+             ++ RL  +  YRG+RH  GLPV
Sbjct: 68  ADPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV+R++
Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148


>gi|170088480|ref|XP_001875463.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650663|gb|EDR14904.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 112

 Score =  130 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN+P       AL   +GIG K++  +C +L +  + +V  L   +V  +   +
Sbjct: 1   MVHILGVNLPDNHLARFALTKFYGIGHKTAHRLCARLQVHDKCKVKDLSPFQVTSLASFL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                      R +  NI     +G Y G RH   LPVRGQ T +NA+T KK  +
Sbjct: 61  SAP-------AREIRENIAHQRMIGSYVGKRHAMHLPVRGQNTQSNAKTAKKLNQ 108


>gi|171686194|ref|XP_001908038.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943058|emb|CAP68711.1| unnamed protein product [Podospora anserina S mat+]
          Length = 219

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +  ++R  +L   E+ ++   I
Sbjct: 77  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLKKRAGELTSEELERLVTII 136

Query: 61  EQDY--------------QVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                  V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 137 QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 196

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 197 RGQHTKTTGRRGRTV---GVSKKK 217


>gi|331250171|ref|XP_003337697.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309316687|gb|EFP93278.1| 30s ribosomal protein s13 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 203

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 60/157 (38%), Gaps = 44/157 (28%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            I GVN+P  K V   L    GIG  ++  IC +L I     V +L E ++ ++   +  
Sbjct: 2   FILGVNLPEHKLVRIGLTRFVGIGHYTANLICARLQIHKALTVGELSEHQIGRLSALLSS 61

Query: 63  D--------------------------------------------YQVEGDLRRTVAMNI 78
                                                          +E DLRR V  NI
Sbjct: 62  PPTTPPTNHKVAELDGIPAPSTLDFDSGPSPQPKLLSLADDPLQRLLIESDLRREVRANI 121

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +G Y+G RH  G PV GQRTHTNA+T +K  K
Sbjct: 122 AHHRAIGSYKGKRHALGFPVNGQRTHTNAKTARKLNK 158


>gi|147919301|ref|YP_686963.1| 30S ribosomal protein S13P [uncultured methanogenic archaeon RC-I]
 gi|121690302|sp|Q0W1V6|RS13_UNCMA RecName: Full=30S ribosomal protein S13P
 gi|110622359|emb|CAJ37637.1| putative 30S ribosomal protein S13P [uncultured methanogenic
           archaeon RC-I]
          Length = 224

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 28/149 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V  AL  I GIG + S+ I  +  + P   +  L   +V ++R  I
Sbjct: 72  IVRIANTDLDGTQTVEFALTGIKGIGNRISKIIARQAQVDPHATMGYLPPEQVDKLRAVI 131

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           +                       +    DL   V  +I  +  +  Y+G+RH RG  VR
Sbjct: 132 DNLEANVPVWMLNRRRDIYTGEDKHLYGVDLTMAVKEDINIMKKIRSYKGIRHERGQKVR 191

Query: 100 GQRTHTNART-------RKKFGKGGVARK 121
           GQRT +  RT       RKK  +GG A+K
Sbjct: 192 GQRTKSTGRTGATVGVVRKKGEQGGAAKK 220


>gi|11465441|ref|NP_045168.1| ribosomal protein S13 [Cyanidium caldarium]
 gi|32363435|sp|Q9TLV0|RR13_CYACA RecName: Full=30S ribosomal protein S13, chloroplastic
 gi|6466344|gb|AAF12926.1|AF022186_48 unknown [Cyanidium caldarium]
          Length = 122

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/101 (48%), Positives = 65/101 (64%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIAG  +P  KRV  AL YI+GIG   S+ I  +L +    RV  L+  E+  IR+ I
Sbjct: 1   MVRIAGRELPTNKRVDIALNYIYGIGPWRSRQILKELKVDFSTRVKDLLVGEIAAIREYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
           E++Y VE DLRR   +NIKRL+++  Y+G RH+  LPVRGQ
Sbjct: 61  ERNYVVESDLRRFELLNIKRLIEINSYKGKRHKMLLPVRGQ 101


>gi|298674774|ref|YP_003726524.1| 30S ribosomal protein S13P [Methanohalobium evestigatum Z-7303]
 gi|298287762|gb|ADI73728.1| ribosomal protein S13P [Methanohalobium evestigatum Z-7303]
          Length = 149

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            R+   ++P  + V  AL  I GIG +++  +     I P+ ++  L + E+  +   I 
Sbjct: 10  VRVMNTDLPGDQPVRLALTGIKGIGRRTANIVVEGSGIDPDTKIGYLSDEEIDTLNSTIN 69

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  + +  D+  ++  ++  L     YRG+RH RGL VRG
Sbjct: 70  NFESHLPSWMLNRQNDPYSGENKHLLGQDIFMSLREDVNTLKKTRAYRGVRHERGLKVRG 129

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV++K+
Sbjct: 130 QRTKSTGRGGSTI---GVSKKK 148


>gi|57281988|emb|CAD19553.1| ribosomal protein S13 [Campynema lineare]
          Length = 116

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|308153493|sp|P82163|RR13_SPIOL RecName: Full=30S ribosomal protein S13, chloroplastic; Flags:
           Precursor
 gi|188036214|pdb|3BBN|M Chain M, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
          Length = 145

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/110 (43%), Positives = 60/110 (54%), Gaps = 12/110 (10%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+    
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVIILRKE--- 103

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
                   +R   + I+RL ++ CYRG+RH+ GLPVRGQRT  N RT K 
Sbjct: 104 --------KRFNRVAIERLKEIRCYRGIRHKLGLPVRGQRTKNNCRTLKG 145


>gi|33341146|gb|AAQ15134.1|AF355059_1 RPS13 [Asphodelus sp. Quagliariello 16105]
          Length = 116

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|585936|sp|P38017|RS13_MYCSP RecName: Full=30S ribosomal protein S13
 gi|625803|pir||C49923 ribosomal protein S13 - Chlamydia trachomatis
 gi|385203|gb|AAA16205.1| S13 [Chlamydia muridarum]
          Length = 119

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 3/115 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MAR+  + IP  K+   +L YI GIG   ++ I     +  E+RV +L E E+ +IR   
Sbjct: 1   MARVLNIEIPNNKKARISLTYIFGIGPTIAKQILADANVDGEKRVKELTEEELTRIRDE- 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            + Y  EGDL+R + +NIKRLM++  YR +RHR+    R   T  NARTRK   K
Sbjct: 60  AKKYTTEGDLKREINLNIKRLMEIKSYRVIRHRKDTCKRS--TKKNARTRKGPKK 112


>gi|328353244|emb|CCA39642.1| 30S ribosomal protein S13 [Pichia pastoris CBS 7435]
          Length = 165

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G        +   L    +G+G +++Q +C+KL   P  R+HQL E +V+ I + +
Sbjct: 47  VHILGKGFKGKTLIDIGLSSKFYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKEL 106

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D  +EG LR  V  NI+    +G Y GLRH  GLPVRGQRT TNA+T KK  K
Sbjct: 107 S-DLTIEGKLRSVVRENIQLKRTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 160


>gi|33341158|gb|AAQ15140.1|AF355065_1 RPS13 [Colchicum persicum]
          Length = 116

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G ++   ++V  A   I GIG K +  +  +L I    ++ +L +S++  + Q I
Sbjct: 1   MSYISGASLVPDEQVRIASTKIPGIGPKKAIQVRYRLGISGNIKMKELTKSQIDLLEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  CQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|110225647|ref|YP_665653.1| ribosomal protein S13 [Nephroselmis olivacea]
 gi|6066162|gb|AAF03180.1|AF110138_12 ribosomal protein S13 [Nephroselmis olivacea]
          Length = 125

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/122 (36%), Positives = 71/122 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  IA   + + ++V  AL  I+GIG   +  IC++L + P  ++ QL  ++V Q+   +
Sbjct: 1   MTTIANTYLSQKQKVSIALQQIYGIGSHLAYQICDQLGLSPNFKIEQLNRNQVEQLSLLV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            Q Y     L+RT+  ++ RL+ + CYRG R+ + LPVRGQRTHTNA+T +K        
Sbjct: 61  SQSYVTGSKLKRTIQQDMSRLISISCYRGFRYIQKLPVRGQRTHTNAKTARKRMPTVTRT 120

Query: 121 KR 122
           ++
Sbjct: 121 RK 122


>gi|307069672|ref|YP_003878149.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola
           CARI]
 gi|306482932|gb|ADM89803.1| 30S ribosomal subunit protein S13 [Candidatus Zinderia insecticola
           CARI]
          Length = 135

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/110 (44%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG+N+P  K +  +L  I GIG   S+ IC    I   ++   L ++E+ +IR+ I
Sbjct: 2   IIRIAGINLPINKNIYISLTKIFGIGINISKKICKVNNIDINKKTKNLNDNELSKIRKEI 61

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
            + Y +EG+L+R + +NIKRL+D+  YRG+RH   LPVRGQRT TNA+T 
Sbjct: 62  YK-YSIEGELKREIFINIKRLIDIKSYRGIRHILKLPVRGQRTRTNAKTC 110


>gi|315229892|ref|YP_004070328.1| 30S ribosomal protein S18e (S13p) [Thermococcus barophilus MP]
 gi|315182920|gb|ADT83105.1| SSU ribosomal protein S18e (S13p) [Thermococcus barophilus MP]
          Length = 148

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +C    + P ++   L + +V  I + +
Sbjct: 7   IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVCRVAGLDPFQKAGYLTDEQVKLIEEIL 66

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                        + +   L      +I RL  +  YRG+RH  GLP+
Sbjct: 67  EDPVKHGIPPWAVNRPKDYETGRDMHLIGAKLVMAWREDINRLRRIRAYRGIRHELGLPL 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV RK+
Sbjct: 127 RGQRTRSNFRRGTTV---GVRRKK 147


>gi|16215380|emb|CAC80432.1| ribosomal protein S13 [Helianthus annuus]
          Length = 116

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/112 (40%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARSVADEQVRIASTKIDGIGPKKAILVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ + CYRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGSPLRGQRTHTNARTSRK 112


>gi|57281980|emb|CAD19549.1| ribosomal protein S13 [Tecophilaea violiflora]
          Length = 116

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYILGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|11497468|ref|NP_042258.1| ribosomal protein S13 [Prototheca wickerhamii]
 gi|1173316|sp|P46747|RT13_PROWI RecName: Full=Ribosomal protein S13, mitochondrial
 gi|467859|gb|AAD12646.1| ribosomal protein S13 [Prototheca wickerhamii]
          Length = 119

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 65/114 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I   ++   K++ +A   I+G+G      IC+ L + PE R+  L   +   + Q I
Sbjct: 1   MVYIQNTHLNDKKQIYQACAQIYGLGHHHCLQICDVLGVSPETRLGMLSTGQHTLLAQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            Q+Y    D+RR    NI+RL+++  YRG RH +GLPVRGQR+H NART +K  
Sbjct: 61  TQNYDTGSDVRRFTRQNIQRLVNIHSYRGYRHIQGLPVRGQRSHGNARTVRKLK 114


>gi|76780566|emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardia rosea]
 gi|76780568|emb|CAD92014.1| mitochondrial ribosomal protein RPS13 [Uvularia perfoliata]
          Length = 116

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|325973299|ref|YP_004250363.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois]
 gi|323651901|gb|ADX97983.1| 30S ribosomal protein S13 [Mycoplasma suis str. Illinois]
          Length = 162

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 36/157 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41
           MARI GV +P  K +  AL  I+GIG  +S+ I                    +KL +  
Sbjct: 1   MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTEAEKSKLEVYM 60

Query: 42  ERRVHQLVESEVIQIRQAIEQ-----------------DYQVEGDLRRTVAMNIKRLMDL 84
           ++RV+ L   E+  + QAI +                    +EGDLR+ ++ ++  L ++
Sbjct: 61  KKRVYSLSSEELASLSQAIVKLQSIQEEVPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             Y GLRHRR LPV GQRT TNARTRK   K    +K
Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRKGPRKTVANKK 157


>gi|11830845|emb|CAA89892.1| ribosomal protein S13 [Magnolia x soulangeana]
 gi|30141203|emb|CAD30284.1| ribosomal protein S13 [Freesia sp. QC-2002]
          Length = 116

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      K+V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|331219824|ref|XP_003322588.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301578|gb|EFP78169.1| 40S ribosomal protein S18 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 215

 Score =  127 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +   C K  +   +R  +L   E+ +I   I
Sbjct: 75  ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 134

Query: 61  EQD---------------------YQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                       YQV    L   +  +++RL  +  +RGLRH  GL V
Sbjct: 135 QNPAQFKIPAWFLNRQRDIVDGKSYQVLSNGLDSKLREDLERLKKIRAHRGLRHYWGLRV 194

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++K+
Sbjct: 195 RGQHTKTTGRRGKTV---GVSKKK 215


>gi|24636943|gb|AAN63484.1|AF314106_1 ribosomal protein S13 [Spiranthes spiralis]
          Length = 116

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++H+L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIHELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|62989825|emb|CAD91305.1| mitochondrial ribosomal protein RPS13 [Telipogon pogonostalix]
          Length = 116

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989815|emb|CAD91300.1| mitochondrial ribosomal protein RPS13 [Pleurothallis endotrachys]
          Length = 116

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ +I Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|325989735|ref|YP_004249434.1| 30S ribosomal protein S13 [Mycoplasma suis KI3806]
 gi|323574820|emb|CBZ40480.1| 30S ribosomal protein S13 [Mycoplasma suis]
          Length = 162

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 36/157 (22%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC-------------------NKLAIPP 41
           MARI GV +P  K +  AL  I+GIG  +S+ I                    +KL +  
Sbjct: 1   MARILGVILPDKKELFVALTKIYGIGLTTSKKIIQYWVLNKVISENKLTESEKSKLEVYM 60

Query: 42  ERRVHQLVESEVIQIRQAIEQ-----------------DYQVEGDLRRTVAMNIKRLMDL 84
           ++RV+ L   E+  + QAI +                    +EGDLR+ ++ ++  L ++
Sbjct: 61  KKRVYSLSSEELASLSQAIVKLQSIQEEIPEVSSFFKDRLLLEGDLRKKISDDLTNLKEI 120

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
             Y GLRHRR LPV GQRT TNARTRK   K    +K
Sbjct: 121 ASYVGLRHRRNLPVHGQRTRTNARTRKGPRKTVANKK 157


>gi|212223248|ref|YP_002306484.1| 30S ribosomal protein S13P [Thermococcus onnurineus NA1]
 gi|212008205|gb|ACJ15587.1| SSU ribosomal protein S13P [Thermococcus onnurineus NA1]
          Length = 149

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     I P  +   L + +V +I + +
Sbjct: 8   IVRVAGVDLDGNKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKKIEEIL 67

Query: 61  E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+             +I RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPTWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV R++
Sbjct: 128 RGQRTRSNFRHGTTV---GVRRRK 148


>gi|62989799|emb|CAD91292.1| mitochondrial ribosomal protein RPS13 [Oncidium orillum]
          Length = 116

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|166895633|ref|YP_001661427.1| ribosomal protein S13 [Cycas taitungensis]
 gi|166706965|dbj|BAF98429.1| ribosomal protein S13 [Cycas taitungensis]
          Length = 150

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/114 (40%), Positives = 69/114 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G      ++V  A   I GIG K +  +  +L I    +V++  + ++ QI Q I
Sbjct: 1   MSYIPGARSVPNEQVRIASTKIDGIGPKKATRVRYRLGISDNIKVNESTKYQIDQIEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
            QD+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +KFG
Sbjct: 61  GQDHVVHWELKRGKRADIERSISISRYRGIRHQDGLPLRGQRTHTNARTCRKFG 114


>gi|76780560|emb|CAD92010.1| mitochondrial ribosomal protein RPS13 [Polygonatum hookeri]
          Length = 116

 Score =  126 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|24636958|gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hybrid cultivar]
          Length = 116

 Score =  126 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|57281982|emb|CAD19550.1| ribosomal protein S13 [Luzuriaga radicans]
          Length = 116

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG + +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989769|emb|CAD91277.1| mitochondrial ribosomal protein RPS13 [Eulophia spectabilis]
 gi|62989791|emb|CAD91288.1| mitochondrial ribosomal protein RPS13 [Mormodes aromatica]
          Length = 116

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|198425572|ref|XP_002131089.1| PREDICTED: similar to putative ribosomal protein S18 [Ciona
           intestinalis]
          Length = 152

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   + +  AL  I GIG + S  +C K  +   +R  +L + E+ +I   +
Sbjct: 12  ILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +I+RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|225678479|gb|EEH16763.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb03]
          Length = 201

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 60  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 119

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 120 QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 179

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 180 RGQHTKTTGRRGRTV---GVSKKK 200


>gi|224082650|ref|XP_002306780.1| predicted protein [Populus trichocarpa]
 gi|118481499|gb|ABK92692.1| unknown [Populus trichocarpa]
 gi|222856229|gb|EEE93776.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|76780564|emb|CAD92012.1| mitochondrial ribosomal protein RPS13 [Xeronema callistemon]
          Length = 116

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   I+GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKIYGIGPKKAIQVRYRLGIRGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|224066487|ref|XP_002302108.1| predicted protein [Populus trichocarpa]
 gi|118481417|gb|ABK92651.1| unknown [Populus trichocarpa]
 gi|222843834|gb|EEE81381.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|72095995|ref|XP_794924.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus
           purpuratus]
 gi|115959683|ref|XP_001190162.1| PREDICTED: similar to ribosomal protein S18 [Strongylocentrotus
           purpuratus]
          Length = 176

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I G+G + +   C K  I   +R  +L + EV ++   +
Sbjct: 36  ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 95

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 96  QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 155

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 156 RGQHTKTTGRRGRTV---GVSKKK 176


>gi|62989725|emb|CAD91255.1| mitochondrial ribosomal protein RPS13 [Caladenia cf. caerulea Chase
           O-487]
          Length = 116

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+GV     ++V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGVRSVPDEQVRIASTKMDGIGPKKAIQVRDRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGKRADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|169784886|ref|XP_001826904.1| 40S ribosomal protein S18 [Aspergillus oryzae RIB40]
 gi|238507888|ref|XP_002385145.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
 gi|83775651|dbj|BAE65771.1| unnamed protein product [Aspergillus oryzae]
 gi|220688664|gb|EED45016.1| ribosomal protein S13p/S18e [Aspergillus flavus NRRL3357]
          Length = 155

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ ++   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLNKRAGELTTEELERVVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V  +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVVSNNLDSKMREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|240104026|ref|YP_002960335.1| 30S ribosomal protein S13P [Thermococcus gammatolerans EJ3]
 gi|239911580|gb|ACS34471.1| SSU ribosomal protein S13P (rps13P) [Thermococcus gammatolerans
           EJ3]
          Length = 149

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     + P  +   L + +V  I + +
Sbjct: 8   IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGLDPYMKAGYLTDEQVKLIEKIL 67

Query: 61  E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+             +I RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDINRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV+R++
Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148


>gi|62989781|emb|CAD91283.1| mitochondrial ribosomal protein RPS13 [Lycomormium squalidum]
          Length = 116

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|321268739|gb|ADW79188.1| ribosomal protein S13 [Cyanophora paradoxa]
          Length = 115

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/112 (42%), Positives = 67/112 (59%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            I GV +P    V   L  I G+G   ++ ICN L I P  +V QL  +++I++ Q IE 
Sbjct: 2   HILGVFLPLDDYVFAGLQKIFGVGKFRAKKICNALLITPFYKVKQLNRNQIIRLSQYIEN 61

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           +Y V  DL+  +  N K L+ +  YRG+RH   LPVRGQRTHTN++T+KK  
Sbjct: 62  NYNVGIDLQNQIKSNFKNLVKISSYRGIRHTLKLPVRGQRTHTNSQTKKKIK 113


>gi|284162135|ref|YP_003400758.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
 gi|284012132|gb|ADB58085.1| ribosomal protein S13 [Archaeoglobus profundus DSM 5631]
          Length = 146

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 24/144 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K V+ AL  I GIG + ++ I + L + P  ++ +L +  + ++R+ +
Sbjct: 5   IVRIADTDLDGNKPVMIALTGIKGIGLRMAKAITSALGLNPRAKLGELDDETIERLRKLV 64

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E++                      + +  D+     ++I++++ + CYRG+RH +G  V
Sbjct: 65  EEELEQHIPSWMFNRRKDPYSGKDLHLLSKDVDFAKMLDIEKMIKIKCYRGVRHAKGYKV 124

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +  R  K    G V RK+
Sbjct: 125 RGQRTRSTGR--KGMTVGVVRRKK 146


>gi|62989805|emb|CAD91295.1| mitochondrial ribosomal protein RPS13 [Pachyplectron arifolium]
          Length = 116

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|317146135|ref|XP_003189773.1| 40S ribosomal protein S13 [Aspergillus oryzae RIB40]
          Length = 137

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  +V +L   +V+ I  A+
Sbjct: 19  MVFILGVNFPERNLVKKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAAL 78

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +  ++E DLRR    +IKRL + G YRG RH  GLPVRGQRT T  +T  K  +
Sbjct: 79  SE-MKIENDLRRQYLDDIKRLKETGTYRGRRHALGLPVRGQRTRTQIKTAVKLNR 132


>gi|33341144|gb|AAQ15133.1|AF355058_1 RPS13 [Asparagus sp. Quagliariello 16104]
          Length = 116

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLIISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTFRK 112


>gi|62989831|emb|CAD91308.1| mitochondrial ribosomal protein RPS13 [Habenaria marmorata]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|24636962|gb|AAN63494.1|AF315230_1 ribosomal protein S13 [Tulipa sp. CQ-2001]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|213422185|ref|ZP_03355251.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. E01-6750]
          Length = 90

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91
           + + VEGDLRR ++M+IKRLMDLGCYRGLR
Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRGLR 90


>gi|62989711|emb|CAD91248.1| mitochondrial ribosomal protein RPS13 [Aeranthes moratii]
 gi|62989717|emb|CAD91251.1| mitochondrial ribosomal protein RPS13 [Arundina graminifolia]
 gi|62989719|emb|CAD91252.1| mitochondrial ribosomal protein RPS13 [Bletilla striata]
 gi|62989753|emb|CAD91269.1| mitochondrial ribosomal protein RPS13 [Dendrobium albosanguineum]
 gi|62989795|emb|CAD91290.1| mitochondrial ribosomal protein RPS13 [Nervilia aragoana]
 gi|62989807|emb|CAD91296.1| mitochondrial ribosomal protein RPS13 [Palmorchis trilobulata]
 gi|62989827|emb|CAD91306.1| mitochondrial ribosomal protein RPS13 [Thunia alba]
 gi|62989833|emb|CAD91309.1| mitochondrial ribosomal protein RPS13 [Phalaenopsis cornu-cervi]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281960|emb|CAD19539.1| ribosomal protein S13 [Rhodohypoxis milloides]
 gi|62989757|emb|CAD91271.1| mitochondrial ribosomal protein RPS13 [Zygostates grandiflora]
 gi|62989801|emb|CAD91293.1| mitochondrial ribosomal protein RPS13 [Oncidium splendidum]
 gi|62989823|emb|CAD91304.1| mitochondrial ribosomal protein RPS13 [Pterostylis nutans]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989821|emb|CAD91303.1| mitochondrial ribosomal protein RPS13 [Ponthieva racemosa]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|62989817|emb|CAD91301.1| mitochondrial ribosomal protein RPS13 [Podochilus cultratus]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989715|emb|CAD91250.1| mitochondrial ribosomal protein RPS13 [Arpophyllum giganteum]
 gi|62989731|emb|CAD91258.1| mitochondrial ribosomal protein RPS13 [Cattleya aurantiaca]
 gi|62989741|emb|CAD91263.1| mitochondrial ribosomal protein RPS13 [Coelia triptera]
 gi|62989785|emb|CAD91285.1| mitochondrial ribosomal protein RPS13 [Meiracyllium trinasutum]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281966|emb|CAD19542.1| ribosomal protein S13 [Convallaria keiskei]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989713|emb|CAD91249.1| mitochondrial ribosomal protein RPS13 [Aa paleacea]
          Length = 116

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG + +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSKVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTQSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|62989729|emb|CAD91257.1| mitochondrial ribosomal protein RPS13 [Calypso bulbosa]
          Length = 116

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIEKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281968|emb|CAD19543.1| ribosomal protein S13 [Milligania stylosa]
 gi|57281972|emb|CAD19545.1| ribosomal protein S13 [Doryanthes palmeri]
 gi|76780557|emb|CAD92008.1| mitochondrial ribosomal protein RPS13 [Isophysis tasmanica]
          Length = 116

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989771|emb|CAD91278.1| mitochondrial ribosomal protein RPS13 [Goodyera pubescens]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGLPLRGQRTHTNARTCRK 112


>gi|89280752|ref|YP_514659.1| ribosomal protein S13 [Oryza sativa Indica Group]
 gi|289065036|ref|YP_003433847.1| ribosomal protein small subunit 13 [Oryza rufipogon]
 gi|74100119|gb|AAZ99283.1| ribosomal protein S13 [Oryza sativa Indica Group]
 gi|74100174|gb|AAZ99337.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|74100228|gb|AAZ99390.1| ribosomal protein S13 [Oryza sativa Japonica Group]
 gi|285026118|dbj|BAI67951.1| ribosomal protein small subunit 13 [Oryza rufipogon]
 gi|285026168|dbj|BAI68000.1| ribosomal protein small subunit 13 [Oryza sativa Indica Group]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 70/115 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K  +
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKLIR 115


>gi|56791639|gb|AAW30357.1| ribosomal protein S13 [Eschscholzia californica]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 66/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G      ++V  A   I GIG + +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYIQGXRSVPDEQVRIASTKIDGIGPQKAIQVRYRLGISGNIKMKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R     I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKREERAXIERLISIYRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|24636927|gb|AAN63476.1|AF314098_1 ribosomal protein S13 [Muscari botryoides]
 gi|24636933|gb|AAN63479.1|AF314101_1 ribosomal protein S13 [Agave americana]
 gi|24636935|gb|AAN63480.1|AF314102_1 ribosomal protein S13 [Polianthes tuberosa]
 gi|24636939|gb|AAN63482.1|AF314104_1 ribosomal protein S13 [Serapias lingua]
 gi|33341150|gb|AAQ15136.1|AF355061_1 RPS13 [Tulbaghia alliacea]
 gi|33341154|gb|AAQ15138.1|AF355063_1 RPS13 [Yucca sp. Quagliariello 16107]
 gi|57281970|emb|CAD19544.1| ribosomal protein S13 [Herreria salsaparilha]
 gi|76780555|emb|CAD92007.1| mitochondrial ribosomal protein RPS13 [Johnsonia pubescens]
 gi|76780562|emb|CAD92011.1| mitochondrial ribosomal protein RPS13 [Eriospermum flagelliforme]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|327195251|ref|YP_004339033.1| ribosomal protein S13 [Coccomyxa sp. C-169]
 gi|325070747|gb|ADY75475.1| ribosomal protein S13 [Coccomyxa sp. C-169]
          Length = 134

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 63/112 (56%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I   N+   K++  AL  I+GIG + S+ IC+ L I    +V  L  S +  + Q I
Sbjct: 1   MIYILNTNLSDNKKIGNALPKIYGIGNQLSKQICDDLGISSGLKVGDLSPSHIDLLSQTI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            Q Y +  +L+     + +RL  +  YRG+RH +GLP RGQRTH NA+T +K
Sbjct: 61  PQTYVIGAELQGETRRSKERLALVSSYRGIRHSQGLPSRGQRTHGNAQTARK 112


>gi|57281998|emb|CAD19558.1| ribosomal protein S13 [Smilax glauca]
 gi|76780553|emb|CAD92006.1| mitochondrial ribosomal protein RPS13 [Borya septentrionalis]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG + +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPQKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|254172984|ref|ZP_04879658.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4]
 gi|214033140|gb|EEB73968.1| ribosomal protein S13p/S18e [Thermococcus sp. AM4]
          Length = 149

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++   K++  AL  I GIG   +  +     I P  +   L + +V  I + +
Sbjct: 8   IVRVAGVDLDGHKQLRWALTGIKGIGINFATMVLRVAGIDPYMKTGYLTDEQVKLIEKIL 67

Query: 61  E---------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY+   D+             ++ RL  +  YRG+RH  GLP+
Sbjct: 68  EDPVAHGIPAWAVNRPKDYETGKDMHLITAKLVMAWREDVNRLRRIRAYRGIRHELGLPL 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV+R++
Sbjct: 128 RGQRTRSNFRHGTTV---GVSRRK 148


>gi|32363483|sp|P08977|RT13_MAIZE RecName: Full=Ribosomal protein S13, mitochondrial
 gi|897624|gb|AAA70274.1| S13 homologous protein; putative [Zea mays]
 gi|102579650|gb|ABF70930.1| ribosomal protein S13 [Zea mays subsp. mays]
          Length = 129

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 71/117 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++H+L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K  + G
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARKQIRKG 117


>gi|62989737|emb|CAD91261.1| mitochondrial ribosomal protein RPS13 [Chysis bractescens]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ ++ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989721|emb|CAD91253.1| mitochondrial ribosomal protein RPS13 [Bracisepalum selebicum]
 gi|62989735|emb|CAD91260.1| mitochondrial ribosomal protein RPS13 [Chelonistele amplissima]
 gi|62989751|emb|CAD91268.1| mitochondrial ribosomal protein RPS13 [Geesinkorchis alaticallosa]
 gi|62989765|emb|CAD91275.1| mitochondrial ribosomal protein RPS13 [Entomophobia kinabaluensis]
 gi|62989793|emb|CAD91289.1| mitochondrial ribosomal protein RPS13 [Nabaluia angustifolia]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989813|emb|CAD91299.1| mitochondrial ribosomal protein RPS13 [Phreatia tahitensis]
          Length = 116

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMKELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|145240679|ref|XP_001392986.1| 40S ribosomal protein S18 [Aspergillus niger CBS 513.88]
 gi|134077510|emb|CAK96654.1| unnamed protein product [Aspergillus niger]
          Length = 155

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QSPTQYKIPTWFLNRQRDITDGKDSQVVSNSLDSKIREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|33341156|gb|AAQ15139.1|AF355064_1 RPS13 [Danae racemosa]
 gi|57282000|emb|CAD19559.1| ribosomal protein S13 [Ruscus aculeatus]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989743|emb|CAD91264.1| mitochondrial ribosomal protein RPS13 [Cryptocentrum peruvianum]
 gi|62989745|emb|CAD91265.1| mitochondrial ribosomal protein RPS13 [Cymbidium sp. CQ-2003]
 gi|62989755|emb|CAD91270.1| mitochondrial ribosomal protein RPS13 [Dichaea riopalenquensis]
 gi|62989779|emb|CAD91282.1| mitochondrial ribosomal protein RPS13 [Lycaste aromatica]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEKVRIASTKMDGIGPKKAIQIRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|24636925|gb|AAN63475.1|AF314097_1 ribosomal protein S13 [Agapanthus africanus]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I   R++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNRKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989819|emb|CAD91302.1| mitochondrial ribosomal protein RPS13 [Polystachya pubescens]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHIVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|62989723|emb|CAD91254.1| mitochondrial ribosomal protein RPS13 [Bulbophyllum lobbii]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIKVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|247421835|gb|ACS96445.1| S18.A ribosomal protein [Jatropha curcas]
          Length = 152

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|24636929|gb|AAN63477.1|AF314099_1 ribosomal protein S13 [Ipheion uniflorum]
 gi|33341148|gb|AAQ15135.1|AF355060_1 RPS13 [Nothoscordum inodorum]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVNWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|289597069|ref|YP_003483765.1| ribosomal protein S13P [Aciduliprofundum boonei T469]
 gi|289534856|gb|ADD09203.1| ribosomal protein S13P [Aciduliprofundum boonei T469]
          Length = 148

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V+ A+  I GIG++ ++ I   L + P++++ +L + ++ +IR  I
Sbjct: 7   IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 66

Query: 61  E---------------QDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY    D       L      +I RL  + CYRG+RH +GL V
Sbjct: 67  EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDINRLKRIKCYRGVRHEKGLRV 126

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R+       GV+RK+
Sbjct: 127 RGQRTRSNGRSGLTV---GVSRKK 147


>gi|255559398|ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
 gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18, putative [Ricinus communis]
          Length = 152

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|57281974|emb|CAD19546.1| ribosomal protein S13 [Aphyllanthes monspeliensis]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  +   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRISSTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHKDGSPLRGQRTHTNARTFRK 112


>gi|57281984|emb|CAD19551.1| ribosomal protein S13 [Drymophila sp. Chase 194]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|310792538|gb|EFQ28065.1| 30S ribosomal protein S13 [Glomerella graminicola M1.001]
          Length = 119

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/116 (38%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL     +G  +SQ I  K +I P  +V  L    V  +   +
Sbjct: 1   MVFILGVNFSEQKLVKKALESFFALGPTASQRILAKYSIHPMAKVGTLAPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +  +E D R+ +  N+ RL D+G YRG RH  GLPVRGQRT T   T KK  + 
Sbjct: 61  S-NMTIENDARKVIQQNVMRLKDMGSYRGRRHAMGLPVRGQRTRTQIETAKKLNRA 115


>gi|57281958|emb|CAD19538.1| rps13 [Xanthorrhoea resinosa]
          Length = 116

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|256810446|ref|YP_003127815.1| ribosomal protein S13P [Methanocaldococcus fervens AG86]
 gi|256793646|gb|ACV24315.1| ribosomal protein S13P [Methanocaldococcus fervens AG86]
          Length = 150

 Score =  124 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R++  ++   K+++ AL  I+G+G   ++ I     + P++    L + EV +I + +  
Sbjct: 11  RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTDEEVKKIEEILAD 70

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  + +E DL      +I RL  + CYRG+RH  GLP RG
Sbjct: 71  PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMVVKQEDINRLKRVRCYRGIRHELGLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R  +     GV+R++
Sbjct: 131 QRTKSTFRRGQTV---GVSRRK 149


>gi|57281986|emb|CAD19552.1| ribosomal protein S13 [Eustrephus latifolius]
          Length = 116

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q +
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|67083901|gb|AAY66885.1| ribosomal protein S18 [Ixodes scapularis]
          Length = 153

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|24636960|gb|AAN63493.1|AF315229_1 ribosomal protein S13 [Iris sp. CQ-2001]
          Length = 116

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPHEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ +  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVLHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|62989763|emb|CAD91274.1| mitochondrial ribosomal protein RPS13 [Earina autumnalis]
 gi|62989777|emb|CAD91281.1| mitochondrial ribosomal protein RPS13 [Listera smallii]
          Length = 116

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|242219975|ref|XP_002475760.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia
           placenta Mad-698-R]
 gi|220725032|gb|EED79039.1| hypothetical mitochondrial 30S ribosomal protein S13 [Postia
           placenta Mad-698-R]
          Length = 169

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 50/165 (30%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV +P  +    AL + +GIG K++  +C ++ I    +V  L  +++  +   +
Sbjct: 1   MVHILGVLLPDTQLAKFALTHFYGIGHKTAHRLCARVQIHETCKVRDLTSNQITALTAFL 60

Query: 61  EQ--------------------------------------------------DYQVEGDL 70
                                                               + ++E +L
Sbjct: 61  SSPSTQPSLPRYTLATSNYVPPRVGEPVPENAATITSADGAPVKESLGDRLRNIKIESEL 120

Query: 71  RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           RR +  NI     +G Y G RH  GLPVRGQ T TNA+T KK  +
Sbjct: 121 RREIRENIAHQRMIGSYVGRRHAMGLPVRGQNTQTNAKTAKKLNR 165


>gi|254167094|ref|ZP_04873947.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|254167757|ref|ZP_04874607.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|197623285|gb|EDY35850.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
 gi|197623950|gb|EDY36512.1| ribosomal protein S13p/S18e [Aciduliprofundum boonei T469]
          Length = 150

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + V+ A+  I GIG++ ++ I   L + P++++ +L + ++ +IR  I
Sbjct: 9   IVRIADTDLDGNRPVIYAIQGIKGIGYRVAEGIVKDLNMDPKKKIGELSDEQIEEIRVLI 68

Query: 61  E---------------QDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E               +DY    D       L      +I RL  + CYRG+RH +GL V
Sbjct: 69  EEKIEEMLPSWMMNHRKDYFTGEDRHILSTELDLQKQDDINRLKRIKCYRGVRHEKGLRV 128

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R+       GV+RK+
Sbjct: 129 RGQRTRSNGRSGLTV---GVSRKK 149


>gi|296081217|emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 54  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 113

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 114 ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 173

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 174 RGQHTKTTGRRGKTV---GVSKKR 194


>gi|24636931|gb|AAN63478.1|AF314100_1 ribosomal protein S13 [Triteleia laxa]
          Length = 116

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNSKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQ+THTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIQRLISISRYRGIRHQDGSPLRGQQTHTNARTFRK 112


>gi|57281964|emb|CAD19541.1| ribosomal protein S13 [Aspidistra elatior]
          Length = 116

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKIDGIGPKKAILVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|33521690|gb|AAQ21388.1| ribosomal protein S18 [Ixodes ricinus]
          Length = 152

 Score =  124 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEEVEKLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKFSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|24636954|gb|AAN63490.1|AF315226_1 ribosomal protein S13 [Hyacinthus sp. CQ-2001]
          Length = 116

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L +    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGLSGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|119473095|ref|XP_001258494.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
 gi|119406646|gb|EAW16597.1| ribosomal protein S13p/S18e [Neosartorya fischeri NRRL 181]
          Length = 155

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|121700288|ref|XP_001268409.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1]
 gi|119396551|gb|EAW06983.1| ribosomal protein S13p/S18e [Aspergillus clavatus NRRL 1]
          Length = 155

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|62989775|emb|CAD91280.1| mitochondrial ribosomal protein RPS13 [Liparis liliifolia]
          Length = 116

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GKDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|269991338|emb|CAX12522.1| 30S ribosomal protein S13 [Fucus vesiculosus]
          Length = 126

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQI 56
           M R  G ++   K++  AL  I+GIG   +++I     +        RV  L + E+  +
Sbjct: 1   MVRFLGRDLTNNKKIKYALTTIYGIGLSRAKEILESAGLTNIDQMGTRVKDLSDEEISNL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           R+ +E++YQ+EGDL R   +NIKRLM+ G  +G RHR GLPVRGQRT TNARTR+   K 
Sbjct: 61  RKVLEKNYQLEGDLVRITNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNARTRRGSKKT 120

Query: 117 GVARKR 122
              +K+
Sbjct: 121 VAGKKK 126


>gi|30141211|emb|CAD30288.1| ribosomal protein S13 [Posidonia oceanica]
          Length = 116

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLIYISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|81176511|ref|YP_398395.1| rp13 [Triticum aestivum]
 gi|134064|sp|P07924|RT13_WHEAT RecName: Full=Ribosomal protein S13, mitochondrial
 gi|13716|emb|CAA68574.1| unnamed protein product [Triticum aestivum]
 gi|78675235|dbj|BAE47660.1| rps13 [Triticum aestivum]
 gi|164422217|gb|ABY55190.1| ribosomal protein S13 [Bambusa oldhamii]
 gi|169649048|gb|ACA62609.1| rp13 [Triticum aestivum]
 gi|291498599|gb|ADE08073.1| rps13 [Triticum aestivum]
          Length = 116

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|71005516|ref|XP_757424.1| hypothetical protein UM01277.1 [Ustilago maydis 521]
 gi|46096907|gb|EAK82140.1| hypothetical protein UM01277.1 [Ustilago maydis 521]
          Length = 361

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 41/154 (26%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            + GV++   K V  AL   +GI + ++  +C +L++     V  L ES++ Q+   +  
Sbjct: 170 YLLGVHLADHKLVRIALTNFYGISYATANRLCARLSLHDRATVSSLTESQITQLSAYLSS 229

Query: 63  D-----------------------------------------YQVEGDLRRTVAMNIKRL 81
                                                      ++E DL+R +  NI   
Sbjct: 230 PGSIPARKASPTLLPSSSAVCSSQDVVRPSMEQNAANDALRQIKIEADLKRVLHANINHH 289

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            D+G YRG RH   LPVRGQRT TNART KK  +
Sbjct: 290 RDVGSYRGRRHAAHLPVRGQRTSTNARTAKKLNR 323


>gi|57281996|emb|CAD19557.1| ribosomal protein S13 [Rhipogonum elseyanum]
          Length = 116

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART ++
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRR 112


>gi|62989809|emb|CAD91297.1| mitochondrial ribosomal protein RPS13 [Panisea tricallosa]
 gi|62989811|emb|CAD91298.1| mitochondrial ribosomal protein RPS13 [Pholidota carnea]
          Length = 116

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQMDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|149286992|gb|ABR23395.1| ribosomal protein S18 [Ornithodoros parkeri]
          Length = 153

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELSEEEVEKLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNALENKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|317038077|ref|XP_001401569.2| 40S ribosomal protein S13 [Aspergillus niger CBS 513.88]
          Length = 119

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D ++E DLRR    NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 61  S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 114


>gi|20094907|ref|NP_614754.1| 30S ribosomal protein S13P [Methanopyrus kandleri AV19]
 gi|32363353|sp|Q8TVC1|RS13_METKA RecName: Full=30S ribosomal protein S13P
 gi|19888143|gb|AAM02684.1| Ribosomal protein S13 [Methanopyrus kandleri AV19]
          Length = 151

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 27/145 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE---------- 50
           + RIA V++   K+V  AL  I GIG + +  IC +L +  E+++ +L +          
Sbjct: 9   IVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEEEI 68

Query: 51  -------SEVIQIRQAIEQDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGL 96
                  S +       ++DY+   D       L  TV  +I RL  +  YRG+RH  GL
Sbjct: 69  KKLSEGESNIPSWMYNRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGL 128

Query: 97  PVRGQRTHTNARTRKKFGKGGVARK 121
           PVRGQRT ++ R  +     GV +K
Sbjct: 129 PVRGQRTKSSFRRGRTV---GVKKK 150


>gi|320592066|gb|EFX04505.1| 40S ribosomal protein s13 [Grosmannia clavigera kw1407]
          Length = 118

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + IG ++S  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVFILGVNFNELKLVKKALESFYAIGPQTSARILAKFSIHPRAKMGTLPPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  VE D RR V  NIKRL D+G YRG RH  GLPVRGQRT T   T +K  K
Sbjct: 61  S-NMTVENDARRVVQDNIKRLRDMGTYRGKRHAMGLPVRGQRTRTQILTARKLNK 114


>gi|300121915|emb|CBK22489.2| unnamed protein product [Blastocystis hominis]
          Length = 163

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++V AL  I GIG + +  +C K  I   RR  +L   E+ ++   I
Sbjct: 23  ILRVLNTNIDGKQKIVYALTSIKGIGRRFAMAVCKKAEIDISRRAGELSNDEIEKLIAVI 82

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V  +L+  +  ++ RL  +   RGLRH   L V
Sbjct: 83  STPLQFDIPEWFLNRQKDVETGKYRQVVSNNLQANLREDLNRLKKMRANRGLRHYWNLKV 142

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV+ K+
Sbjct: 143 RGQHTKTTGRFGKSV---GVSTKK 163


>gi|30141201|emb|CAD30283.1| ribosomal protein S13 [Hemerocallis littorea]
          Length = 118

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/115 (39%), Positives = 74/115 (64%), Gaps = 4/115 (3%)

Query: 1   MARIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57
           M+ I+G   V++P ++ V  A   + GIG K +  +  +L I    ++++L + ++ Q+ 
Sbjct: 1   MSYISGARSVSVPDSQ-VRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQME 59

Query: 58  QAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           Q I QD+ V  +L+R    +I+RL+ +  YRG+RH+ GLP+RGQRTHTNART +K
Sbjct: 60  QMIGQDHVVHWELKRGERADIERLISISRYRGIRHQDGLPLRGQRTHTNARTCRK 114


>gi|224085191|ref|XP_002307515.1| predicted protein [Populus trichocarpa]
 gi|222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa]
          Length = 152

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + S  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFSNIVCKKADVDMNKRAGELSAAELDNLMTIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|62989783|emb|CAD91284.1| mitochondrial ribosomal protein RPS13 [Megastylis glandulosa]
          Length = 116

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|255946732|ref|XP_002564133.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591150|emb|CAP97376.1| Pc22g00880 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 155

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERIVTIL 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QTPTQYKIPSWFLNRQRDITDGKDTQVVSNGLDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|114151585|ref|YP_740351.1| ribosomal protein S13 [Zea perennis]
 gi|114151617|ref|YP_740439.1| ribosomal protein S13 [Zea luxurians]
 gi|114151651|ref|YP_740416.1| ribosomal protein S13 [Zea mays subsp. parviglumis]
 gi|115278553|ref|YP_762332.1| ribosomal protein S13 [Sorghum bicolor]
 gi|115278623|ref|YP_762484.1| ribosomal protein S13 [Tripsacum dactyloides]
 gi|55851987|gb|AAV67796.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116057|gb|ABE98690.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116102|gb|ABE98734.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|93116150|gb|ABE98781.1| ribosomal protein S13 [Zea mays subsp. mays]
 gi|102567919|gb|ABF70836.1| ribosomal protein S13 [Zea perennis]
 gi|102567984|gb|ABF70868.1| ribosomal protein S13 [Zea mays subsp. parviglumis]
 gi|110287613|gb|ABG65659.1| ribosomal protein S13 [Zea luxurians]
 gi|114309674|gb|ABI60891.1| ribosomal protein S13 [Sorghum bicolor]
 gi|114432114|gb|ABI74663.1| ribosomal protein S13 [Tripsacum dactyloides]
          Length = 116

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++H+L + ++ QI Q I
Sbjct: 1   MSYISGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISGNIKIHELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|211938661|gb|ACJ13227.1| FI09342p [Drosophila melanogaster]
          Length = 170

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 30  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 89

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 90  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 149

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 150 RGQHTKTTGRRGRTV---GVSKKK 170


>gi|56755399|gb|AAW25879.1| unknown [Schistosoma japonicum]
          Length = 157

 Score =  123 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L + EV ++   +
Sbjct: 17  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 76

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RG+RH  GL V
Sbjct: 77  SNPSQSKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 136

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 137 RGQHTKTTGRRGRTV---GVSRKK 157


>gi|57281992|emb|CAD19555.1| ribosomal protein S13 [Philesia magellanica]
 gi|57281994|emb|CAD19556.1| ribosomal protein S13 [Lapageria rosea]
          Length = 116

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQISQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQGGSPLRGQRTHTNARTFRK 112


>gi|62989767|emb|CAD91276.1| mitochondrial ribosomal protein RPS13 [Epipactis helleborine]
          Length = 116

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|62989727|emb|CAD91256.1| mitochondrial ribosomal protein RPS13 [Caleana major]
          Length = 116

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTQMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|15219950|ref|NP_173692.1| PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding /
           structural constituent of ribosome [Arabidopsis
           thaliana]
 gi|15234790|ref|NP_192718.1| RPS18C (S18 RIBOSOMAL PROTEIN); RNA binding / nucleic acid binding
           / structural constituent of ribosome [Arabidopsis
           thaliana]
 gi|18399100|ref|NP_564434.1| 40S ribosomal protein S18 (RPS18B) [Arabidopsis thaliana]
 gi|297809155|ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297845304|ref|XP_002890533.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297851838|ref|XP_002893800.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
           lyrata]
 gi|464707|sp|P34788|RS18_ARATH RecName: Full=40S ribosomal protein S18
 gi|10086474|gb|AAG12534.1|AC015446_15 ribosomal protein S18 [Arabidopsis thaliana]
 gi|10092450|gb|AAG12853.1|AC079286_10 40S ribosomal protein S18; 25853-24673 [Arabidopsis thaliana]
 gi|14423408|gb|AAK62386.1|AF386941_1 S18.A ribosomal protein [Arabidopsis thaliana]
 gi|15724158|gb|AAL06471.1|AF411781_1 At1g22780/T22J18_5 [Arabidopsis thaliana]
 gi|405613|emb|CAA80684.1| ribosomal protein S18A [Arabidopsis thaliana]
 gi|434343|emb|CAA82273.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|434345|emb|CAA82274.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|434906|emb|CAA82275.1| S18 ribosomal protein [Arabidopsis thaliana]
 gi|2505871|emb|CAA72909.1| ribosomal protein S18A [Arabidopsis thaliana]
 gi|3287678|gb|AAC25506.1| Match to ribosomal S18 gene mRNA gb|Z28701, DNA gb|Z23165 from A.
           thaliana. ESTs gb|T21121, gb|Z17755, gb|R64776 and
           gb|R30430 come from this gene [Arabidopsis thaliana]
 gi|4538910|emb|CAB39647.1| S18.A ribosomal protein [Arabidopsis thaliana]
 gi|7267675|emb|CAB78103.1| S18.A ribosomal protein [Arabidopsis thaliana]
 gi|14334584|gb|AAK59471.1| putative ribosomal protein S18 [Arabidopsis thaliana]
 gi|17979113|gb|AAL47500.1| putative ribosomal protein S18 [Arabidopsis thaliana]
 gi|21555397|gb|AAM63849.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|21592452|gb|AAM64403.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|21593027|gb|AAM64976.1| ribosomal protein S18, putative [Arabidopsis thaliana]
 gi|30102858|gb|AAP21347.1| At4g09800 [Arabidopsis thaliana]
 gi|56236126|gb|AAV84519.1| At1g22780 [Arabidopsis thaliana]
 gi|98961089|gb|ABF59028.1| At1g22780 [Arabidopsis thaliana]
 gi|145713244|gb|ABP96570.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713246|gb|ABP96571.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713248|gb|ABP96572.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713250|gb|ABP96573.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713252|gb|ABP96574.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713254|gb|ABP96575.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713256|gb|ABP96576.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713258|gb|ABP96577.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713260|gb|ABP96578.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713262|gb|ABP96579.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713264|gb|ABP96580.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713266|gb|ABP96581.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713268|gb|ABP96582.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713270|gb|ABP96583.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713272|gb|ABP96584.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713274|gb|ABP96585.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713276|gb|ABP96586.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713278|gb|ABP96587.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713280|gb|ABP96588.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713282|gb|ABP96589.1| pointed first leaf [Arabidopsis thaliana]
 gi|145713284|gb|ABP96590.1| pointed first leaf [Arabidopsis thaliana]
 gi|297318298|gb|EFH48720.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336375|gb|EFH66792.1| hypothetical protein ARALYDRAFT_472522 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339642|gb|EFH70059.1| hypothetical protein ARALYDRAFT_473557 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332192166|gb|AEE30287.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
 gi|332193538|gb|AEE31659.1| 40S ribosomal protein S18 [Arabidopsis thaliana]
          Length = 152

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|294463827|gb|ADE77437.1| unknown [Picea sitchensis]
          Length = 152

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRFANLVCKKADVDMNKRAGELSAAELENLMTIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPKQFKIPEWFLNRQKDYKDGRTNQLVSNALDMRLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|46125031|ref|XP_387069.1| hypothetical protein FG06893.1 [Gibberella zeae PH-1]
          Length = 179

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 37  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTIL 96

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 97  QNPTQYKIPTWFINRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 156

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 157 RGQHTKTTGRRGRTV---GVSKKK 177


>gi|24636941|gb|AAN63483.1|AF314105_1 ribosomal protein S13 [Serapias vomeracea]
          Length = 116

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|25553581|dbj|BAC24846.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|50509331|dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|125599284|gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group]
          Length = 148

 Score =  123 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + S   C K  I   +R  +L   E+ ++   +
Sbjct: 8   ILRLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 67

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 68  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 128 RGQHTKTTGRRGKTV---GVSKKR 148


>gi|299115551|emb|CBN75754.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 192

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  +L  I G+G + +  IC K  + P +R  ++   E+ ++   I
Sbjct: 52  ILRILNTNIDGRRKVQYSLTSIRGVGRRFANLICKKAEVDPNKRAGEMTADEIEKLVAII 111

Query: 61  EQDYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                          + + +  +++RL  +  +RG+RH  G+ V
Sbjct: 112 QNPRQFKIPDWFLNRQKDWKTGKTTQISSQTIDQKLRDDLERLKKIRSHRGIRHYWGVRV 171

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ T T  R  K    GG
Sbjct: 172 RGQHTKTTGRRGKIVAAGG 190


>gi|62989797|emb|CAD91291.1| mitochondrial ribosomal protein RPS13 [Neuwiedia veratrifolia]
          Length = 116

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGHKKAMKVRYRLGISGNIKMNELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|156542046|ref|XP_001601390.1| PREDICTED: similar to S18e ribosomal protein [Nasonia vitripennis]
          Length = 165

 Score =  123 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I   +
Sbjct: 25  ILRVVGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 84

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++R+  +  +RGLRH  GL V
Sbjct: 85  ANPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGLRHYWGLRV 144

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 145 RGQHTKTTGRRGRTV---GVSKKK 165


>gi|57281976|emb|CAD19547.1| ribosomal protein S13 [Behnia reticulata]
 gi|57281978|emb|CAD19548.1| ribosomal protein S13 [Blandfordia punicea]
          Length = 116

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNAGTFRK 112


>gi|21228257|ref|NP_634179.1| 30S ribosomal protein S13P [Methanosarcina mazei Go1]
 gi|32363348|sp|Q8PV19|RS13_METMA RecName: Full=30S ribosomal protein S13P
 gi|20906714|gb|AAM31851.1| SSU ribosomal protein S13P [Methanosarcina mazei Go1]
          Length = 162

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI   ++  AK V  AL  + GIG +++  I     + P   +  L + EV ++  AI 
Sbjct: 24  VRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDAAIG 83

Query: 62  Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +                      + +  D+  T   +I  L  +  YRGLRH RGL VRG
Sbjct: 84  KFEEIVPSWMLNRQKDLTTGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+RK+
Sbjct: 144 QRTKSTGRRGSTV---GVSRKK 162


>gi|254571277|ref|XP_002492748.1| Putative mitochondrial ribosomal protein of the small subunit
           [Pichia pastoris GS115]
 gi|238032546|emb|CAY70569.1| Putative mitochondrial ribosomal protein of the small subunit
           [Pichia pastoris GS115]
          Length = 121

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G        +   L    +G+G +++Q +C+KL   P  R+HQL E +V+ I + +
Sbjct: 3   VHILGKGFKGKTLIDIGLSSKFYGVGLQTAQRLCSKLGFYPSMRMHQLNEQQVMAITKEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D  +EG LR  V  NI+    +G Y GLRH  GLPVRGQRT TNA+T KK  K
Sbjct: 63  S-DLTIEGKLRSVVRENIQLKRTIGSYAGLRHAMGLPVRGQRTKTNAKTAKKLNK 116


>gi|62989787|emb|CAD91286.1| mitochondrial ribosomal protein RPS13 [Microtis parviflora]
          Length = 116

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|255566712|ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
 gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18, putative [Ricinus communis]
          Length = 152

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|124804238|ref|XP_001347943.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
 gi|23496197|gb|AAN35856.1| 40S ribosomal protein S18, putative [Plasmodium falciparum 3D7]
          Length = 156

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V+ AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVIIALTAIKGIGKRMATVICKQANVDPTKRAGELTTEEIDNIVHIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  STPTQFKIPDWFLNRRKDLKEGKNIHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|322695969|gb|EFY87768.1| 40S ribosomal protein S18 [Metarhizium acridum CQMa 102]
 gi|322707043|gb|EFY98622.1| 40S ribosomal protein S18 [Metarhizium anisopliae ARSEF 23]
          Length = 156

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|18024674|gb|AAF98448.1| putative mitochondrial 40S ribosomal protein [Aspergillus niger]
          Length = 148

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 3/115 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P      ++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNL--KSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAAL 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D ++E DLRR    NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 59  S-DMKIENDLRRQYLDNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 112


>gi|50291021|ref|XP_447943.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527254|emb|CAG60894.1| unnamed protein product [Candida glabrata]
          Length = 126

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + +  AL    +G+G  +++ +C+KL   P  R+HQL E +++ I   +
Sbjct: 3   VHILGKAFKGKEVIRIALASKFYGVGKSTAERLCSKLGFYPWMRMHQLSEPQILNITSEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
             +  +EGD R  V  NI     +G Y G+RH  GLPVRGQRT  NA+T +K  + GV
Sbjct: 63  S-NMTIEGDARAIVRENIALKKKIGSYEGMRHALGLPVRGQRTRNNAKTARKINRIGV 119


>gi|289807631|ref|ZP_06538260.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 88

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89
           + + VEGDLRR ++M+IKRLMDLGCYRG
Sbjct: 61 AK-FVVEGDLRREISMSIKRLMDLGCYRG 88


>gi|115455881|ref|NP_001051541.1| Os03g0794700 [Oryza sativa Japonica Group]
 gi|297606796|ref|NP_001059007.2| Os07g0173700 [Oryza sativa Japonica Group]
 gi|25553579|dbj|BAC24844.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|28269440|gb|AAO37983.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
 gi|50400039|gb|AAT76427.1| putative ribosomal protein S18A [Oryza sativa Japonica Group]
 gi|50509329|dbj|BAD30787.1| putative ribosomal protein S18 [Oryza sativa Japonica Group]
 gi|108711530|gb|ABF99325.1| 40S ribosomal protein S18, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113550012|dbj|BAF13455.1| Os03g0794700 [Oryza sativa Japonica Group]
 gi|125557400|gb|EAZ02936.1| hypothetical protein OsI_25076 [Oryza sativa Indica Group]
 gi|215765128|dbj|BAG86825.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765330|dbj|BAG87027.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636521|gb|EEE66653.1| hypothetical protein OsJ_23275 [Oryza sativa Japonica Group]
 gi|255677547|dbj|BAF20921.2| Os07g0173700 [Oryza sativa Japonica Group]
          Length = 152

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S   C K  I   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRAGELTPEELERLMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|4467407|emb|CAA69616.2| ribosomal protein S13 [Elymus sibiricus]
          Length = 116

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MXYIXGARSLPDEQVRIASTKMDGIGPKKAIQLRYRLGISXNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  AQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTARK 112


>gi|226504536|ref|NP_001151612.1| 40S ribosomal protein S18 [Zea mays]
 gi|242032711|ref|XP_002463750.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
 gi|194708790|gb|ACF88479.1| unknown [Zea mays]
 gi|195605976|gb|ACG24818.1| 40S ribosomal protein S18 [Zea mays]
 gi|195618188|gb|ACG30924.1| 40S ribosomal protein S18 [Zea mays]
 gi|195620216|gb|ACG31938.1| 40S ribosomal protein S18 [Zea mays]
 gi|195648096|gb|ACG43516.1| 40S ribosomal protein S18 [Zea mays]
 gi|238008500|gb|ACR35285.1| unknown [Zea mays]
 gi|241917604|gb|EER90748.1| hypothetical protein SORBIDRAFT_01g005360 [Sorghum bicolor]
          Length = 152

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPEELERLMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|62989739|emb|CAD91262.1| mitochondrial ribosomal protein RPS13 [Cleistes rosea]
          Length = 116

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ ++ Q I
Sbjct: 1   MSYISGARSVPDSKVRIASTKMDGIGPKKAIQVRSRLGISGNIKINELTKSQIDKMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  + +R    +I+RL+ L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWEFQRGERADIERLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|223469633|gb|ACM90157.1| S18 ribosomal protein [Jatropha curcas]
          Length = 152

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMVIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +   RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNPRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|242398330|ref|YP_002993754.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
 gi|242264723|gb|ACS89405.1| 30S ribosomal protein S13P [Thermococcus sibiricus MM 739]
          Length = 156

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A V+I   K++  AL  I GIG   +  IC    + P+ +   L E +V  I   +
Sbjct: 15  IVRVANVDIDGHKQLRLALTGIRGIGVNFATVICRIAGLDPKMKAGYLTEEQVKAIEAVL 74

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                        + +   L      ++ RL  +  YRG+RH  GLP+
Sbjct: 75  EDPAKHGLPSWILNRPKDYEQGRDMHLIGAKLVMAWREDVNRLRKIRAYRGIRHELGLPL 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV+R++
Sbjct: 135 RGQRTRSNFRRGLTL---GVSRRK 155


>gi|156372342|ref|XP_001628997.1| predicted protein [Nematostella vectensis]
 gi|156215987|gb|EDO36934.1| predicted protein [Nematostella vectensis]
          Length = 153

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ A+  I G+G + +  +C K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGKQKIMFAMTSIKGVGRRYANIVCKKADIDMNKRAGELTEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDHKDGKYSQILANGLDNKMREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 132 RGQHTKTTGRKGRTV---GVAKKK 152


>gi|71040621|dbj|BAE16014.1| ribosomal protein S18 [Crassostrea gigas]
          Length = 152

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++++ A+  I GIG + +  +C K  +   +R  +L E E+ +I   +
Sbjct: 12  ILRILNTNIDGRRKIMFAMTAIKGIGRRYANVVCKKADVDITKRAGELSEEEIDKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKFSQVMSNTLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152


>gi|67538542|ref|XP_663045.1| hypothetical protein AN5441.2 [Aspergillus nidulans FGSC A4]
 gi|40743411|gb|EAA62601.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259485111|tpe|CBF81904.1| TPA: ribosomal protein S13p/S18e (AFU_orthologue; AFUA_6G13550)
           [Aspergillus nidulans FGSC A4]
          Length = 155

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  + G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKEKIMYALTQVKGVGRRYSNLVCKKADVDLNKRAGELTTEELERIVTIL 73

Query: 61  E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DYQV    L      +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDIVDGKDYQVLSNGLDSKYREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|13877525|gb|AAK43840.1|AF370463_1 S18.A ribosomal protein [Arabidopsis thaliana]
 gi|17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana]
          Length = 152

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKTDVDMNKRAGELSAAEIDNLMTIV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+       V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|20089977|ref|NP_616052.1| 30S ribosomal protein S13P [Methanosarcina acetivorans C2A]
 gi|19914940|gb|AAM04532.1| ribosomal protein S13p [Methanosarcina acetivorans C2A]
          Length = 182

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI   ++  AK V  AL  + G+G ++++ I     + P   +  L E EV ++  AI 
Sbjct: 44  VRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIG 103

Query: 62  Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +                      + +  D+  T   +I  L  +  YRGLRH RGL VRG
Sbjct: 104 KFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 163

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+RK+
Sbjct: 164 QRTKSTGRRGSTV---GVSRKK 182


>gi|226493800|ref|NP_001141254.1| hypothetical protein LOC100273341 [Zea mays]
 gi|194703562|gb|ACF85865.1| unknown [Zea mays]
 gi|195618614|gb|ACG31137.1| 40S ribosomal protein S18 [Zea mays]
          Length = 152

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|242772774|ref|XP_002478105.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500]
 gi|218721724|gb|EED21142.1| ribosomal protein S13p/S18e [Talaromyces stipitatus ATCC 10500]
          Length = 163

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R   +   E+ +I   I
Sbjct: 22  IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 81

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 82  QNPTQYKIPSWFLNRQRDIVDGKDSQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 141

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 142 RGQHTKTTGRRGRTV---GVSKKK 162


>gi|62989773|emb|CAD91279.1| mitochondrial ribosomal protein RPS13 [Huttonaea grandiflora]
          Length = 116

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +D+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SKDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|57281990|emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax]
          Length = 116

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIAQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHT+ART + 
Sbjct: 61  GQDHVVHWELKRGERAHIERLISISRYRGIRHQEGSPLRGQRTHTSARTFRT 112


>gi|115661694|ref|XP_001202116.1| PREDICTED: similar to ribosomal protein S18, partial
           [Strongylocentrotus purpuratus]
 gi|115689720|ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial
           [Strongylocentrotus purpuratus]
          Length = 152

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I G+G + +   C K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIMYALTAIKGVGRRYANICCRKADIDVSKRAGELTDDEVEKLMTIL 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQMDVKDGKYGQMMANNLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|62989733|emb|CAD91259.1| mitochondrial ribosomal protein RPS13 [Cephalanthera rubra]
          Length = 116

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|68069309|ref|XP_676565.1| ribosomal protein S18 [Plasmodium berghei strain ANKA]
 gi|82794396|ref|XP_728420.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484766|gb|EAA19985.1| ribosomal protein S13/S18 [Plasmodium yoelii yoelii]
 gi|56496322|emb|CAH96119.1| ribosomal protein S18, putative [Plasmodium berghei]
          Length = 156

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V  AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|56758184|gb|AAW27232.1| SJCHGC01887 protein [Schistosoma japonicum]
 gi|226472372|emb|CAX77222.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472374|emb|CAX77223.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472376|emb|CAX77224.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472378|emb|CAX77225.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472380|emb|CAX77226.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472382|emb|CAX77227.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472384|emb|CAX77228.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472386|emb|CAX77229.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226472388|emb|CAX77230.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473486|emb|CAX71428.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473488|emb|CAX71429.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473490|emb|CAX71430.1| ribosomal protein S18 [Schistosoma japonicum]
 gi|226473492|emb|CAX71431.1| ribosomal protein S18 [Schistosoma japonicum]
          Length = 152

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTDDEVEKLVTVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152


>gi|24636937|gb|AAN63481.1|AF314103_1 ribosomal protein S13 [Dactylorhiza romana]
          Length = 116

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|22550356|ref|NP_689356.1| ribosomal protein S13 [Chaetosphaeridium globosum]
 gi|22417022|gb|AAM96621.1|AF494279_26 ribosomal protein S13 [Chaetosphaeridium globosum]
          Length = 122

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/103 (40%), Positives = 68/103 (66%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70
             K++  AL  ++GIG   +  IC+ L + P  +V+QL   +  ++ + I  ++ +E +L
Sbjct: 15  NKKQLRFALIQLYGIGRAKASFICSLLGVSPFIKVNQLTRFQTDELNKIISSNFLIELEL 74

Query: 71  RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
           +R V  +I+RL+ +GCYRGLRH  GLP+RGQRTHTNA+T ++ 
Sbjct: 75  KRIVQTDIRRLVTIGCYRGLRHIAGLPLRGQRTHTNAKTARRL 117


>gi|62989747|emb|CAD91266.1| mitochondrial ribosomal protein RPS13 [Cypripedium adamianum]
 gi|62989749|emb|CAD91267.1| mitochondrial ribosomal protein RPS13 [Paphiopedilum insigne]
          Length = 117

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR-GLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+  G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERLISISRYRGIRHQDGGSPLRGQRTHTNARTCRK 113


>gi|115390150|ref|XP_001212580.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
 gi|114194976|gb|EAU36676.1| 40S ribosomal protein S18 [Aspergillus terreus NIH2624]
          Length = 155

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ ++   +
Sbjct: 14  ILRLLNTNVDGKQKIMYALTQIKGVGRRYSNLVCKKADVDLTKRAGELTTEELERVVTIL 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   + +    +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQRDITDGKDAHVLSNGVDQKAREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|324525495|gb|ADY48555.1| 40S ribosomal protein S18 [Ascaris suum]
          Length = 154

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   +R  +L E ++ ++ Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINKRAGELTEEDMEKLTQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PKQYKIPNWFLNRQKDIKDGKYTQCLSTALDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|225432662|ref|XP_002282412.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225437044|ref|XP_002278727.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|225460586|ref|XP_002262702.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 152

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|156847769|ref|XP_001646768.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117448|gb|EDO18910.1| hypothetical protein Kpol_1023p81 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 146

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL YI G+G + +  +C K  +   +R  +L + E+ ++ Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTYIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNFKIPAWFLNRQKDVNDGKDYHSLANNIESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|91083227|ref|XP_973632.1| PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum]
 gi|270007711|gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum]
          Length = 152

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  + EV +I   +
Sbjct: 12  ILRILNTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSDEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|269101038|ref|YP_003289186.1| 30S ribosomal protein S13 [Ectocarpus siliculosus]
 gi|266631546|emb|CAV31217.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus]
 gi|270118676|emb|CAT18738.1| Chloroplast 30S ribosomal protein S13 [Ectocarpus siliculosus]
          Length = 126

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 4/126 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQI 56
           M R  G ++   K++  AL  I+GIG   +++I  K  +        R   L + ++  +
Sbjct: 1   MVRFLGRDLANNKKIKYALTAIYGIGLSRAKEILEKAGLENVDKEGVRTKDLSDEDISNL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           R+ +E+DYQ+E DL R   +NIKRLM+ G  +G RHR GLPVRGQRT TN RTR+   K 
Sbjct: 61  RKVLEKDYQLEADLYRLTNLNIKRLMENGSIKGRRHRAGLPVRGQRTRTNGRTRRGGKKT 120

Query: 117 GVARKR 122
              + +
Sbjct: 121 VAGKNK 126


>gi|304314284|ref|YP_003849431.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587743|gb|ADL58118.1| 30S ribosomal protein S13p [Methanothermobacter marburgensis str.
           Marburg]
          Length = 149

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIA  +I   K +  AL  I G+G   S+ I         +R+  L + E+ ++ +AI
Sbjct: 8   MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KNPAKYNIPSWMINRRNDYETGEDKHLIESDLDMCLREDLNRMRKTRSYKGRRHELGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +   T +K    GV RK+
Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148


>gi|15678064|ref|NP_275178.1| 30S ribosomal protein S13P [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122789|sp|O26141|RS13_METTH RecName: Full=30S ribosomal protein S13P
 gi|2621070|gb|AAB84542.1| ribosomal protein S18 (E.coli ) [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 149

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RIA  +I   K +  AL  I G+G   S+ I         +R+  L + E+ ++ +AI
Sbjct: 8   MVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLEEAI 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KNPAKYNIPSWMINRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +   T +K    GV RK+
Sbjct: 128 RGQRTKS---TFRKGSSVGVRRKK 148


>gi|56791635|gb|AAW30355.1| ribosomal protein S13 [Piper betle]
          Length = 109

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 66/107 (61%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G  +   ++V  A   + GIG K +  +  +L I    ++++L + ++ ++ Q I QD+ 
Sbjct: 2   GARLVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIEKMEQMIGQDHV 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L++    +I+RL+ +  YRG+RH+ G PVRGQRTHTNART +K
Sbjct: 62  VHWELKKGERADIERLISISRYRGIRHKDGSPVRGQRTHTNARTFRK 108


>gi|70909571|emb|CAJ17207.1| ribosomal protein S18e [Curculio glandium]
          Length = 152

 Score =  121 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  E EV +I   +
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYSNIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYNQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|50344504|emb|CAH04338.1| S18e ribosomal protein [Timarcha balearica]
          Length = 152

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G NI   ++V+ AL  I G+G + S  +  K  +  ++R  +  E EV +I   +
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYSNLVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYNQLTSSTLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|32363352|sp|Q8TRR2|RS13_METAC RecName: Full=30S ribosomal protein S13P
          Length = 162

 Score =  121 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI   ++  AK V  AL  + G+G ++++ I     + P   +  L E EV ++  AI 
Sbjct: 24  VRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLDTAIG 83

Query: 62  Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +                      + +  D+  T   +I  L  +  YRGLRH RGL VRG
Sbjct: 84  KFEDIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+RK+
Sbjct: 144 QRTKSTGRRGSTV---GVSRKK 162


>gi|116207686|ref|XP_001229652.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51]
 gi|88183733|gb|EAQ91201.1| hypothetical protein CHGG_03136 [Chaetomium globosum CBS 148.51]
          Length = 156

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 14  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERLVTII 73

Query: 61  EQD--------------YQVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                  V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTAYKIPSWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|264667373|gb|ACY71272.1| ribosomal protein S18 [Chrysomela tremulae]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G NI   ++V+ AL  I G+G + +  +  K  +  ++R  +  + EV +I   +
Sbjct: 12  ILRILGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSDEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIIDGKYSQLTSSSLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|242043060|ref|XP_002459401.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
 gi|241922778|gb|EER95922.1| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I G+G + S  +C K  I   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKQKIMFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELSSDELERLMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|195998744|ref|XP_002109240.1| ribosomal protein S18 [Trichoplax adhaerens]
 gi|190587364|gb|EDV27406.1| ribosomal protein S18 [Trichoplax adhaerens]
          Length = 153

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G NI    +++ AL  I G G + +  +C K  +  ++R  +L E E+ ++   +
Sbjct: 13  ILRVMGTNIDGRVKIMFALTAIKGCGRRFANIVCKKAGVDIDKRAGELTEDEIDKVITIM 72

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  QNPRQYKIPDWFLNRQKDIKDGKFSQVLSNNLETKLREDLERLKKVRAHRGIRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 133 RGQHTKTTGRKGRTV---GVAKKK 153


>gi|318086970|gb|ADV40077.1| ribosomal protein S18 [Latrodectus hesperus]
          Length = 153

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E EV ++   +
Sbjct: 12  ILRVMNTNIDGRRKVMFALTAIKGVGRRFSNLVCKKADVDLNKRAGELSEEEVEKLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  ++GLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKYSQVTSNGLENKLREDLERLKKIRAHKGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|260829983|ref|XP_002609941.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
 gi|41018059|sp|Q8ISP0|RS18_BRABE RecName: Full=40S ribosomal protein S18
 gi|24266988|gb|AAN52390.1| ribosomal protein S18 [Branchiostoma belcheri]
 gi|229295303|gb|EEN65951.1| hypothetical protein BRAFLDRAFT_114927 [Branchiostoma floridae]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I G+G + S  +C K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|194753476|ref|XP_001959038.1| ribosomal protein S18 [Drosophila ananassae]
 gi|190620336|gb|EDV35860.1| ribosomal protein S18 [Drosophila ananassae]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIVDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|74325175|ref|YP_316595.1| ribosomal protein S13 [Thalassiosira pseudonana]
 gi|74100241|gb|AAZ99402.1| ribosomal protein S13 [Thalassiosira pseudonana]
          Length = 115

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    +P  K +  +L  + GIG   S  IC +L +    ++ +L   + I++ ++I
Sbjct: 1   MVYILETELPEDKSIYFSLTKVFGIGKFQSLLICKRLGLSSNCKLSKLTSDQTIKLVKSI 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           E  +  +  +LR++  + +K+L+ +  Y+G+R  RGLPVRGQRTHTNA+T  +
Sbjct: 61  ENANLVINSNLRKSKTILLKKLIQIKTYKGIRRLRGLPVRGQRTHTNAKTASR 113


>gi|325182081|emb|CCA16534.1| 40S ribosomal protein S18 putative [Albugo laibachii Nc14]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++   AL  I GIG + +  IC K  +   +R  +L   E+ ++   I
Sbjct: 12  ILRILNTNIDGRRKCWIALTSIAGIGRRFAILICKKAEVDITKRAGELSNDEIERLVAII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V  +L+  +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPLQFKIPVWFLNRKKDYKTGKHSQAVANNLQGKLREDLERLKKIHTHRGLRHCWGLKV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 132 RGQHTKTTGRRGRTVG 147


>gi|170291190|ref|YP_001738006.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175270|gb|ACB08323.1| ribosomal protein S13 [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 149

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+    +   K V+ AL  + GI    +  I  K  I P R + +L + E  +I   +
Sbjct: 9   IVRLLNTTLDGTKPVIVALTGVRGISHTLALTILRKAGIHPNRLLGELSDEEYAKIEDVV 68

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
              ++                      +  D+   +  +I  +  +G ++G+RH  GL V
Sbjct: 69  NNPHKYGVPWWLMNRQKDYRNNESRILIGDDVNWYMTQDINLMKKIGSWKGIRHELGLKV 128

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R  K     G  RK+
Sbjct: 129 RGQRTKTTGRVGKTV---GYQRKK 149


>gi|212531369|ref|XP_002145841.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
 gi|210071205|gb|EEA25294.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
          Length = 155

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R   +   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|325118781|emb|CBZ54332.1| putative 40S ribosomal protein S18 [Neospora caninum Liverpool]
          Length = 156

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++VV AL  I GIG + S  IC K  I   +R  +L   E+ ++    
Sbjct: 14  ILRILNTNVDGREKVVIALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V   L      +++RL  +  +RGLRH  GL V
Sbjct: 74  STPQQFKIPTWFLNRQKDVRDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|258569403|ref|XP_002543505.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
 gi|237903775|gb|EEP78176.1| 40S ribosomal protein S18 [Uncinocarpus reesii 1704]
          Length = 157

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 16  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 75

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  ++   +  +++RL  +  +RGLRH  GL V
Sbjct: 76  QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 135

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 136 RGQHTKTTGRRGRTV---GVSKKK 156


>gi|154270985|ref|XP_001536346.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
 gi|150409569|gb|EDN05013.1| 40S ribosomal protein S18 [Ajellomyces capsulatus NAm1]
 gi|225555622|gb|EEH03913.1| 40S ribosomal protein S18 [Ajellomyces capsulatus G186AR]
 gi|325091939|gb|EGC45249.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H88]
          Length = 155

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|30141205|emb|CAD30285.1| ribosomal protein S13 [Lilium speciosum]
          Length = 116

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  +   + GIG K +  +  +L +  + ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +LRR    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHLVHWELRRGSRADIERLISIYPYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|24636956|gb|AAN63491.1|AF315227_1 ribosomal protein S13 [Sansevieria trifasciata]
          Length = 116

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+       ++V  A   I GIG K +  +  +L I    ++++L + ++ QI Q +
Sbjct: 1   MLYISVSRSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|121544007|gb|ABM55667.1| putative ribosomal protein S18 [Maconellicoccus hirsutus]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI    +++ AL  I GIG + S  +  K  +  ++R  +  + EV +I   +
Sbjct: 12  ILRIMNTNIDGKIKIMFALTAIKGIGRRFSNVVLKKADVDLDKRAGECSDEEVEKIITIM 71

Query: 61  EQDYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  TNPRQFKIPDWFLNRQKDIVDGKYLQLASSNLDSKIREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|327289179|ref|XP_003229302.1| PREDICTED: 40S ribosomal protein S18-like [Anolis carolinensis]
          Length = 197

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 57  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 116

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 117 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 176

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 177 RGQHTKTTGRRGRTV---GVSKKK 197


>gi|187119176|ref|NP_001119689.1| ribosomal protein S18 [Acyrthosiphon pisum]
 gi|89473736|gb|ABD72680.1| putative ribosomal protein S18 [Acyrthosiphon pisum]
 gi|239788236|dbj|BAH70806.1| ACYPI000081 [Acyrthosiphon pisum]
 gi|326493984|dbj|BAJ85454.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522712|dbj|BAJ88402.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 152

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ A+  I GIG + S  +  K  +   +R  +  + EV +I   +
Sbjct: 12  ILRILSTNIDGKRKVMFAMTAIKGIGRRFSNIVLKKADVDLNKRAGECTDEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVVDGKFSQLTSSTLDSKLREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|56791633|gb|AAW30354.1| ribosomal protein S13 [Liriodendron tulipifera]
          Length = 109

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 65/107 (60%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G      K+V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I QD+ 
Sbjct: 2   GARSVPDKQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHV 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 62  VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108


>gi|242211468|ref|XP_002471572.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
 gi|220729344|gb|EED83220.1| 40S ribosomal protein S18 [Postia placenta Mad-698-R]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERLVTII 74

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQRDIVDGKNSQILSNSVDSKIRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|156098723|ref|XP_001615377.1| 40S ribosomal protein S18 [Plasmodium vivax SaI-1]
 gi|148804251|gb|EDL45650.1| 40S ribosomal protein S18, putative [Plasmodium vivax]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V  AL  I GIG + +  IC +  +   +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|195124097|ref|XP_002006530.1| GI21106 [Drosophila mojavensis]
 gi|193911598|gb|EDW10465.1| GI21106 [Drosophila mojavensis]
          Length = 158

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 18  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 77

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 78  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 137

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 138 RGQHTKTTGRRGRTV---GVSKKK 158


>gi|299751837|ref|XP_002911694.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130]
 gi|298409557|gb|EFI28200.1| 40s ribosomal protein [Coprinopsis cinerea okayama7#130]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTII 74

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKNYQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|15218103|ref|NP_177898.1| 30S ribosomal protein S13, chloroplast, putative [Arabidopsis
           thaliana]
 gi|32363391|sp|Q9CA19|RT13_ARATH RecName: Full=Small ribosomal subunit protein S13, mitochondrial;
           Short=mS13; Flags: Precursor
 gi|12323293|gb|AAG51625.1|AC012193_7 putative 30S ribosomal protein S13; 38847-37703 [Arabidopsis
           thaliana]
 gi|33589778|gb|AAQ22655.1| At1g77750 [Arabidopsis thaliana]
 gi|332197896|gb|AEE36017.1| small ribosomal subunit protein S13 [Arabidopsis thaliana]
          Length = 154

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    +P  K +   L  ++GIG + S  +   L I   +    L   E+I +R+ + Q
Sbjct: 33  RVGNAEVPNNKPLKTGLQEVYGIGRRKSHQVLCHLGI-TNKLARDLTGKELIDLREEVGQ 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +Q   +LRR V   I+RL+++ CYRG RHR GLP RGQRT TNART+K        +K+
Sbjct: 92  -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGLPCRGQRTSTNARTKKGKAVAIAGKKK 150


>gi|70943818|ref|XP_741909.1| ribosomal protein S18 [Plasmodium chabaudi chabaudi]
 gi|56520588|emb|CAH81563.1| ribosomal protein S18, putative [Plasmodium chabaudi chabaudi]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  I GIG + +  IC +  + P +R  +L   E+  I   +
Sbjct: 14  ILRVLNTNVDGKEKVTIALTAIKGIGKRIANVICKQANVDPTKRAGELTTEEINNIVHIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  SSPSQFKIPDWFLNRRRDIKDGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|307165872|gb|EFN60227.1| 40S ribosomal protein S18 [Camponotus floridanus]
          Length = 152

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I   +
Sbjct: 12  ILRVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++R+  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|17136882|ref|NP_476964.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
 gi|24656100|ref|NP_725943.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
 gi|194881531|ref|XP_001974884.1| ribosomal protein S18 [Drosophila erecta]
 gi|195336052|ref|XP_002034661.1| ribosomal protein S18 [Drosophila sechellia]
 gi|195486935|ref|XP_002091713.1| ribosomal protein S18 [Drosophila yakuba]
 gi|195585039|ref|XP_002082302.1| ribosomal protein S18 [Drosophila simulans]
 gi|730637|sp|P41094|RS18_DROME RecName: Full=40S ribosomal protein S18
 gi|349256|gb|AAA28870.1| ribosomal protein S18 [Drosophila melanogaster]
 gi|7302403|gb|AAF57491.1| ribosomal protein S18, isoform A [Drosophila melanogaster]
 gi|21626903|gb|AAM68401.1| ribosomal protein S18, isoform B [Drosophila melanogaster]
 gi|38047723|gb|AAR09764.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba]
 gi|38048391|gb|AAR10098.1| similar to Drosophila melanogaster RpS18 [Drosophila yakuba]
 gi|56201301|dbj|BAD72904.1| RpS18 [Drosophila simulans]
 gi|56201321|dbj|BAD72922.1| RpS18 [Drosophila sechellia]
 gi|90855595|gb|ABE01159.1| IP16603p [Drosophila melanogaster]
 gi|190658071|gb|EDV55284.1| ribosomal protein S18 [Drosophila erecta]
 gi|194126631|gb|EDW48674.1| ribosomal protein S18 [Drosophila sechellia]
 gi|194177814|gb|EDW91425.1| ribosomal protein S18 [Drosophila yakuba]
 gi|194194311|gb|EDX07887.1| ribosomal protein S18 [Drosophila simulans]
          Length = 152

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|170592174|ref|XP_001900844.1| 40S ribosomal protein S18 [Brugia malayi]
 gi|158591711|gb|EDP30315.1| 40S ribosomal protein S18, putative [Brugia malayi]
          Length = 154

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   RR  +L E ++ +++Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKYSQMLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|312082633|ref|XP_003143525.1| 40S ribosomal protein S18 [Loa loa]
 gi|307761312|gb|EFO20546.1| 40S ribosomal protein S18 [Loa loa]
          Length = 154

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +  +C K  I   RR  +L E ++ +++Q ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVVCRKADIDINRRAGELSEEDLEKLQQVMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKYSQVLSTSLDNKLREDLERLKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|259482715|tpe|CBF77457.1| TPA: 40S ribosomal protein S13 (AFU_orthologue; AFUA_4G07640)
           [Aspergillus nidulans FGSC A4]
          Length = 119

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P  + V ++L    G+G + S  I ++  I    +V +L   +V+ +   +
Sbjct: 1   MVFILGVNFPEGQLVQKSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +  ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT  N +   +  +
Sbjct: 61  SE-MKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNR 114


>gi|237833767|ref|XP_002366181.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
 gi|211963845|gb|EEA99040.1| 40S ribosomal protein S18, putative [Toxoplasma gondii ME49]
 gi|221486391|gb|EEE24652.1| 40S ribosomal protein S18, putative [Toxoplasma gondii GT1]
 gi|221508170|gb|EEE33757.1| 40S ribosomal protein S18, putative [Toxoplasma gondii VEG]
          Length = 156

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++VV AL  I GIG + S  IC K  I   +R  +L   E+ ++    
Sbjct: 14  ILRILNTNVDGREKVVVALTAIRGIGRRVSNLICKKADIDTNKRAGELTADEISKVVAIA 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V   L      +++RL  +  +RGLRH  GL V
Sbjct: 74  STPQQFKIPTWFLNRQKDVKDGKHKHVVANGLDTVWREDLERLKKMRLHRGLRHYWGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|6324248|ref|NP_014318.1| Sws2p [Saccharomyces cerevisiae S288c]
 gi|1730748|sp|P53937|SWS2_YEAST RecName: Full=37S ribosomal protein SWS2, mitochondrial; AltName:
           Full=Sick without securin protein 2
 gi|791103|emb|CAA60177.1| unknown [Saccharomyces cerevisiae]
 gi|1301975|emb|CAA95955.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|71064119|gb|AAZ22527.1| Sws2p [Saccharomyces cerevisiae]
 gi|151944453|gb|EDN62731.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|190409070|gb|EDV12335.1| hypothetical protein SCRG_03217 [Saccharomyces cerevisiae RM11-1a]
 gi|256270278|gb|EEU05496.1| Sws2p [Saccharomyces cerevisiae JAY291]
 gi|259149280|emb|CAY82522.1| Sws2p [Saccharomyces cerevisiae EC1118]
 gi|285814570|tpg|DAA10464.1| TPA: Sws2p [Saccharomyces cerevisiae S288c]
 gi|323335810|gb|EGA77089.1| Sws2p [Saccharomyces cerevisiae Vin13]
          Length = 143

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + +  AL    +GIG  +++ IC+KL   P  R+HQL E +++ I   +
Sbjct: 3   VHILGKGFKGKEVIKIALASKFYGIGKTTAEKICSKLGFYPWMRMHQLSEPQIMSIASEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +EGD R  V  NI     +G Y G+RH   LPVRGQ T  NA+T +K  K
Sbjct: 63  ST-MTIEGDARAIVKDNIALKRKIGSYSGMRHTLHLPVRGQHTRNNAKTARKLNK 116


>gi|33322096|gb|AAQ06768.1|AF496109_3 30s ribosomal protein S13 [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 82

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAGV++PR KRVV AL YI+GIG  ++++IC    +  + R   L   +  ++R  +
Sbjct: 1  MARIAGVDLPRDKRVVIALTYIYGIGEHTAREICAAAGVSEDIRSKDLTPEQQEKLRAEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83
          ++ Y+VEGDLRR V+MNIKRL+D
Sbjct: 61 DK-YRVEGDLRREVSMNIKRLVD 82


>gi|295668839|ref|XP_002794968.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
 gi|226285661|gb|EEH41227.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb01]
 gi|226294814|gb|EEH50234.1| 40S ribosomal protein S18 [Paracoccidioides brasiliensis Pb18]
          Length = 155

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRAGEITTEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|312219643|emb|CBX99586.1| hypothetical protein [Leptosphaeria maculans]
          Length = 233

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ ++   I
Sbjct: 92  IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 151

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 152 QNPLQYKIPAWFLNRQRDIVDGKNSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 211

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 212 RGQHSKTTGRRGRTV---GVSKKK 232


>gi|119175400|ref|XP_001239936.1| hypothetical protein CIMG_09557 [Coccidioides immitis RS]
          Length = 125

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 1   MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T
Sbjct: 61  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 104


>gi|33341152|gb|AAQ15137.1|AF355062_1 RPS13 [Dracaena sp. Quagliariello 16106]
          Length = 116

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 66/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+       ++V  A   I GIG K +  +  +L I    ++++L + ++  + Q I
Sbjct: 1   MLYISVSRSVPDEQVRIASTKIDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDLLEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|66548968|ref|XP_625104.1| PREDICTED: 40S ribosomal protein S18 [Apis mellifera]
          Length = 152

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I   +
Sbjct: 12  ILRVMGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIM 71

Query: 61  EQDYQ--------------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q              V+G         L   +  +++R+  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLERMKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|297527615|ref|YP_003669639.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
 gi|297256531|gb|ADI32740.1| ribosomal protein S13P [Staphylothermus hellenicus DSM 12710]
          Length = 157

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG +I  + + V  L  I G+G   +  IC +L I PE R+  L + E+ +I   +
Sbjct: 16  IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 75

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  +L   V  +I+R   +  +RG+RH  GL V
Sbjct: 76  SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 135

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R        GV RKR
Sbjct: 136 RGQRTRTTGRLGLTV---GVRRKR 156


>gi|11466637|ref|NP_066320.1| ribosomal protein S13 [Malawimonas jakobiformis]
 gi|10178675|gb|AAG13687.1|AF295546_13 ribosomal protein S13 [Malawimonas jakobiformis]
          Length = 126

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/111 (42%), Positives = 76/111 (68%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G  I + K +  AL  I+G+G+K++  ICN + I  ++++ ++  +++  IR+ +
Sbjct: 1   MLYLFGTYIKKNKNLRIALTSIYGLGYKNTCKICNSIGIGNKKKIDKITNTQLYTIRKIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
              Y++ GDLRR +++NIKR +D+  YRGLRH+   PVRGQRTHTNART+K
Sbjct: 61  NNKYKISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111


>gi|296809581|ref|XP_002845129.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
 gi|238844612|gb|EEQ34274.1| 40S ribosomal protein S18 [Arthroderma otae CBS 113480]
          Length = 155

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDINDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|307109786|gb|EFN58023.1| 40S ribosomal protein S18 [Chlorella variabilis]
          Length = 153

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + S   C K  +   +R  +L   E+  I   +
Sbjct: 13  ILRVLNTNVDGKQKIMYALTAIKGIGRRFSNICCKKAEVDLNKRAGELSAEELESIMTIV 72

Query: 61  EQD--YQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                Y++                       L   +  +++RL  +  +RGLRH  GL V
Sbjct: 73  ANPRAYKIPDWFLNRQKDVKDGRYSQVTSSALDTKLRDDLERLKKIRNHRGLRHYWGLTV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GVA+K+
Sbjct: 133 RGQHTKTTGRRGKTV---GVAKKK 153


>gi|221056254|ref|XP_002259265.1| ribosomal protein s18 [Plasmodium knowlesi strain H]
 gi|193809336|emb|CAQ40038.1| ribosomal protein s18, putative [Plasmodium knowlesi strain H]
          Length = 156

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V  AL  I GIG + +  IC +  +   +R  +L   E+  I   +
Sbjct: 14  ILRILNTNVDGKEKVTIALTAIKGIGKRMATVICKQANVDSTKRAGELTTEEINNIVHIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   +  +++R+  +  +RGLRH  GL V
Sbjct: 74  NAPSQFKIPDWFLNRRKDVKEGKNLHVIANQLDSYLREDLERMKKIRLHRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|57281956|emb|CAD19537.1| ribosomal protein S13 [Anthericum liliago]
          Length = 116

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I
Sbjct: 1   MLYISGARSVPDEQVTIASIKMDGIGPKKAIQLRYRLGISGNIKMNELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+RH+ G PVRGQRTHTNA T +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGIRHQDGSPVRGQRTHTNAGTFRK 112


>gi|315048097|ref|XP_003173423.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
 gi|311341390|gb|EFR00593.1| 40S ribosomal protein S18 [Arthroderma gypseum CBS 118893]
          Length = 155

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|311334520|emb|CBN08641.1| 40S ribosomal protein S18 [Microcosmus squamiger]
          Length = 152

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI+  NI   ++++ A+  + G+G + S  IC K  +   +R  +L + E+ ++   +
Sbjct: 12  ILRISNTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  + +R+  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKFSQVLSNQLDNKLREDTERMKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|54039447|sp|Q962R1|RS18_SPOFR RecName: Full=40S ribosomal protein S18
 gi|15213824|gb|AAK92187.1|AF400215_1 ribosomal protein S18 [Spodoptera frugiperda]
 gi|48958395|dbj|BAD23920.1| ribosomal protein S18 [Antheraea yamamai]
 gi|268306384|gb|ACY95313.1| ribosomal protein S18 [Manduca sexta]
 gi|315115383|gb|ADT80664.1| ribosomal protein S18 [Euphydryas aurinia]
          Length = 152

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ A+  I G+G + S  +  K  I  ++R  +  E EV +I   +
Sbjct: 12  ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|170092941|ref|XP_001877692.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647551|gb|EDR11795.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 156

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNLVCKKADVDLNKRAGELNSDELERIVTII 74

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKNSQILSNGVDSKLRDDLERLKKIRAHRGLRHFWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|261188787|ref|XP_002620807.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
 gi|239592039|gb|EEQ74620.1| ribosomal protein S13/S18 [Ajellomyces dermatitidis SLH14081]
 gi|239610306|gb|EEQ87293.1| 40S ribosomal protein S18 [Ajellomyces dermatitidis ER-3]
 gi|327349270|gb|EGE78127.1| ribosomal protein S13p/S18e [Ajellomyces dermatitidis ATCC 18188]
          Length = 155

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANQMESKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|50344500|emb|CAH04336.1| S18e ribosomal protein [Cicindela campestris]
          Length = 152

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G NI   ++V+ A+  I G+G + +  +  K  +  ++R  +  E EV +I   +
Sbjct: 12  ILRILGTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|62989759|emb|CAD91272.1| mitochondrial ribosomal protein RPS13 [Disa tripetaloides]
          Length = 116

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSSISGARSVPDSQVRIASTKMDGIGPKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|70909575|emb|CAJ17208.1| ribosomal protein S18e [Sphaerius sp. APV-2005]
          Length = 152

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ AL  I GIG + S  +  K  +  ++R  +  E EV +I   +
Sbjct: 12  ILRIMNTNIEGNRKVMFALTAIKGIGRRYSNIVLKKADVDLDKRAGECSEEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                         +L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  QVPRQFKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|30141207|emb|CAD30286.1| ribosomal protein S13 [Fritillaria persica]
          Length = 116

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 70/112 (62%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  +   + GIG K +  +  +L +  + ++++L + ++ QI Q I
Sbjct: 1   MSYISGARSVPDEQVRISSTKMDGIGPKKAIQLRYRLGLSGKIKINELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +LRR    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHLVHWELRRGSRADIERLIYISPYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|57281962|emb|CAD19540.1| ribosomal protein S13 [Ixiolirion tataricum]
          Length = 116

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 68/112 (60%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      + V  A   + GIG K +  I  +L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEEVRIASAKMDGIGPKKAIQIRYQLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERAHIERFISISRYRGIRHQDGSPLRGQRTHTNARTWRK 112


>gi|320037802|gb|EFW19739.1| 40S ribosomal protein S13 [Coccidioides posadasii str. Silveira]
          Length = 156

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 31  MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T
Sbjct: 91  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRT 134


>gi|255632414|gb|ACU16557.1| unknown [Glycine max]
          Length = 148

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 10/127 (7%)

Query: 2   ARIAGVNI--------PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
            R+  +NI        P  KR+V AL  +HGIG   +Q I  +L +   + V  L + E+
Sbjct: 24  VRVQNINIGGGVGGEIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKREL 82

Query: 54  IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             IR+ + + Y +  DL++ V  ++ RL+ + CYRG+RH   LP RGQRTHTNARTR+  
Sbjct: 83  HSIRELLSK-YLIGNDLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSR 141

Query: 114 GKGGVAR 120
                +R
Sbjct: 142 KTFSGSR 148


>gi|302500473|ref|XP_003012230.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
 gi|302652150|ref|XP_003017934.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
 gi|327292934|ref|XP_003231164.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
 gi|291175787|gb|EFE31590.1| hypothetical protein ARB_01490 [Arthroderma benhamiae CBS 112371]
 gi|291181521|gb|EFE37289.1| hypothetical protein TRV_08054 [Trichophyton verrucosum HKI 0517]
 gi|326466583|gb|EGD92036.1| 40S ribosomal protein S18 [Trichophyton rubrum CBS 118892]
 gi|326473764|gb|EGD97773.1| 40S ribosomal protein S18 [Trichophyton tonsurans CBS 112818]
          Length = 155

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLHKRAGEISSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|73667630|ref|YP_303645.1| 30S ribosomal protein S13P [Methanosarcina barkeri str. Fusaro]
 gi|91207705|sp|Q46GC7|RS13_METBF RecName: Full=30S ribosomal protein S13P
 gi|72394792|gb|AAZ69065.1| SSU ribosomal protein S13P [Methanosarcina barkeri str. Fusaro]
          Length = 162

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            RI   ++  AK V  AL  + GIG +++  I     + P   +  L + EV ++ +AI 
Sbjct: 24  VRIMNTDLKGAKPVEYALTGLPGIGRRTAILIAKGAGVDPTATLGYLPDEEVAKLDRAIG 83

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               +  + +  D+  T   +I  L  +  YRGLRH RGL VRG
Sbjct: 84  NFEGIVPSWMLNRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRG 143

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+R++
Sbjct: 144 QRTKSTGRRGSTV---GVSRRK 162


>gi|32363341|sp|Q8LPW2|RT13_SOYBN RecName: Full=Small ribosomal subunit protein S13, mitochondrial;
           Flags: Precursor
 gi|20977547|gb|AAK94674.1| ribosomal protein S13 [Glycine max]
          Length = 148

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/127 (37%), Positives = 71/127 (55%), Gaps = 10/127 (7%)

Query: 2   ARIAGVNI--------PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
            R+  +NI        P  KR+V AL  +HGIG   +Q I  +L +   + V  L + E+
Sbjct: 24  VRVQNINIGGGVGGEIPDNKRLVYALQNLHGIGRSKAQHIVAELGV-ENKFVKDLSKREL 82

Query: 54  IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             IR+ + + Y +  DL++ V  ++ RL+ + CYRG+RH   LP RGQRTHTNARTR+  
Sbjct: 83  YSIRELLSK-YLIGNDLKKCVERDVGRLVGIQCYRGIRHVDSLPCRGQRTHTNARTRRSR 141

Query: 114 GKGGVAR 120
                +R
Sbjct: 142 KTFSGSR 148


>gi|195380645|ref|XP_002049081.1| ribosomal protein S18 [Drosophila virilis]
 gi|194143878|gb|EDW60274.1| ribosomal protein S18 [Drosophila virilis]
          Length = 152

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|50303317|ref|XP_451600.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640732|emb|CAH01993.1| KLLA0B01562p [Kluyveromyces lactis]
          Length = 146

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+     VV AL  I G+G + +  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNINVVYALTTIRGVGRRYANLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRSHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|302789830|ref|XP_002976683.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
 gi|300155721|gb|EFJ22352.1| hypothetical protein SELMODRAFT_175726 [Selaginella moellendorffii]
          Length = 152

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++KR
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152


>gi|215400753|ref|YP_002327514.1| ribosomal protein S13 [Vaucheria litorea]
 gi|194441203|gb|ACF70931.1| ribosomal protein S13 [Vaucheria litorea]
          Length = 126

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 84/126 (66%), Gaps = 4/126 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPP----ERRVHQLVESEVIQI 56
           M R+ G+++P+ K +  AL  I+GIG   +++I +K+ +      + +V  L ++ +  +
Sbjct: 1   MVRLIGIDLPKGKYINYALTSIYGIGISRAEEILSKIGLDKFSIKKLKVEDLSDTNISAL 60

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           R+ +E +YQ+EGDLRR  ++N+KRLM++G  +G RHR GLPVRGQRT TNARTR+   K 
Sbjct: 61  RKILEDEYQLEGDLRRLKSLNLKRLMEIGSIKGRRHRVGLPVRGQRTRTNARTRRGTKKT 120

Query: 117 GVARKR 122
              +K+
Sbjct: 121 VAGKKK 126


>gi|56791629|gb|AAW30352.1| ribosomal protein S13 [Eichhornia crassipes]
          Length = 110

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 66/107 (61%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G      ++V  A   I GIG K +  +  +L I    ++++L + ++ Q+ Q I+QD+ 
Sbjct: 3   GARSVPDEQVRIASTKIDGIGPKKAIQLRYRLGISGNIKINELTKYQIDQMEQMIDQDHF 62

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 63  VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTSRK 109


>gi|212537637|ref|XP_002148974.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224]
 gi|210068716|gb|EEA22807.1| 40S ribosomal protein S13 [Penicillium marneffei ATCC 18224]
          Length = 119

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  ++  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLQTFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +  ++E DLRR +  +IKRL D G YRG RH  GLPVRGQ T +  +T  K    
Sbjct: 61  SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115


>gi|125809258|ref|XP_001361051.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
 gi|195154539|ref|XP_002018179.1| GL16906 [Drosophila persimilis]
 gi|54636224|gb|EAL25627.1| GA21399 [Drosophila pseudoobscura pseudoobscura]
 gi|194113975|gb|EDW36018.1| GL16906 [Drosophila persimilis]
          Length = 152

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  TNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|50344502|emb|CAH04337.1| S18e ribosomal protein [Dascillus cervinus]
          Length = 152

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G NI   ++V+ AL  I G+G + +  +  K  +  ++R  +  E EV +I   +
Sbjct: 12  ILRIMGTNIDGKRKVMFALTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKIITIM 71

Query: 61  EQDYQ--------------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q              V+G         L   +  ++ R+  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSYLDSKLREDLGRMKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|324309721|gb|ADY18502.1| ribosomal protein S13 [Phaeodactylum tricornutum]
          Length = 116

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G  +P  K +  +L Y +GIG  +S  +C KL      +V  L +  + ++ + +
Sbjct: 1   MVYLFGSELPDNKSIFFSLRYAYGIGKGNSSSLCKKLGFSKNLKVRNLSKEHINKLIKIM 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           E    +V GDL+++  +  K L  +  YRGLR  +GLPVRGQRTHTNART +K
Sbjct: 61  EVLKIEVAGDLKKSKLLISKTLASIKSYRGLRKNQGLPVRGQRTHTNARTARK 113


>gi|30141209|emb|CAD30287.1| ribosomal protein S13 [Veratrum latifolium]
          Length = 114

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 2/112 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   I GIG      +  +L I    ++++L + ++ ++ + I
Sbjct: 1   MSYISGARLVPDEQVRIASTKIDGIGPT--IQVRYRLGISGNIKINELTKYQIDKMEEII 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTFRK 110


>gi|302416813|ref|XP_003006238.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum
           VaMs.102]
 gi|261355654|gb|EEY18082.1| mitochondrial 37S ribosomal protein SWS2 [Verticillium albo-atrum
           VaMs.102]
          Length = 119

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 3/122 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G   SQ I  K +I P  +V  L    +  +   +
Sbjct: 1   MVFILGVNFSEQKLVKKALESFYALGPSVSQRILAKYSIHPWAKVGSLAPKTITSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +E D ++ +  NI+RL D+G YRG RH   LP RGQRT T   T KK  +  V R
Sbjct: 61  S-VMTIENDAKKVLRENIQRLKDMGSYRGRRHAMNLPARGQRTRTQIETAKKLNR--VDR 117

Query: 121 KR 122
           KR
Sbjct: 118 KR 119


>gi|224365646|ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera]
 gi|209954170|emb|CAQ77617.1| ribosomal protein S13 [Vitis vinifera]
 gi|239764761|gb|ACS15230.1| ribosomal protein S13 [Vitis vinifera]
          Length = 116

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I
Sbjct: 1   MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+RL+ +  YRG+ H+ G P+RGQRTHTNART +K
Sbjct: 61  GQDHVVHWELKRGERADIERLISISRYRGICHQDGSPLRGQRTHTNARTCRK 112


>gi|302680575|ref|XP_003029969.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8]
 gi|300103660|gb|EFI95066.1| hypothetical protein SCHCODRAFT_85470 [Schizophyllum commune H4-8]
          Length = 156

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVDGKRKIMYALTEIKGVGRRYSNIVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 61  E---------------------QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                     +DYQ+    +   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPTQFKIPTWFLNRQKDIVDGKDYQILSNGIDSKLRDDLERLKKIRAHRGLRHYWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|217075242|gb|ACJ85981.1| unknown [Medicago truncatula]
          Length = 152

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++  A+  I GIG + +   C K  +   +R  +L  +E+  I   +
Sbjct: 12  ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELSAAELDNIMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|126465712|ref|YP_001040821.1| 30S ribosomal protein S13P [Staphylothermus marinus F1]
 gi|158706279|sp|A3DMQ3|RS13_STAMF RecName: Full=30S ribosomal protein S13P
 gi|126014535|gb|ABN69913.1| SSU ribosomal protein S13P [Staphylothermus marinus F1]
          Length = 151

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG +I  + + V  L  I G+G   +  IC +L I PE R+  L + E+ +I   +
Sbjct: 10  IVRIAGTDIDGSLKTVYGLAEIKGVGVNLAYGICRRLGIDPEMRIGYLTDEEIKRIEDLL 69

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  +L   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  SNPSAYDIPSWMLNRRKDYVTGKDMHLIGAELIFYVKQDIEREKKIKSWRGIRHALGLKV 129

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R        GV +KR
Sbjct: 130 RGQRTRTTGRLGLTV---GVRKKR 150


>gi|119196879|ref|XP_001249043.1| 40S ribosomal protein S18 [Coccidioides immitis RS]
 gi|303322136|ref|XP_003071061.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110760|gb|EER28916.1| 40S ribosomal protein S18, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|320032724|gb|EFW14675.1| 40S ribosomal protein S18 [Coccidioides posadasii str. Silveira]
          Length = 155

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  +   +R  ++   E+ +I   I
Sbjct: 14  ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLTKRAGEITTEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  ++   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPTWFLNRQRDITDGKDSQVLANNMDSKLREDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|21392218|gb|AAM48463.1| RH43343p [Drosophila melanogaster]
          Length = 152

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|255628659|gb|ACU14674.1| unknown [Glycine max]
          Length = 152

 Score =  119 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + S   C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGIGRRFSNICCKKADVDMNKRAGELSAAELDSVMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQLKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|149234674|ref|XP_001523216.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146453005|gb|EDK47261.1| 40S ribosomal protein S18 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 145

 Score =  119 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + S  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERIVTIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|164429137|ref|XP_956794.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
 gi|157072424|gb|EAA27558.2| 40S ribosomal protein S18 [Neurospora crassa OR74A]
 gi|289618437|emb|CBI55161.1| unnamed protein product [Sordaria macrospora]
          Length = 156

 Score =  119 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV +L  I G+G + S  +C K  +   +R  +L   E+ +I   +
Sbjct: 14  ILRLLNTNVDGKQKVVYSLTKIKGVGRRYSNLVCKKADVDLSKRAGELTSEELERIVTIM 73

Query: 61  EQD--------------YQVEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                  V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTAYKIPAWFLNRQRDIVDGKDSQILANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|126136941|ref|XP_001384994.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054]
 gi|126092216|gb|ABN66965.1| ribosomal protein S18B [Scheffersomyces stipitis CBS 6054]
          Length = 145

 Score =  119 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVDLTKRAGELTQEELERIVTIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKVPAWFLNRQKDHVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|302755154|ref|XP_002961001.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii]
 gi|302767174|ref|XP_002967007.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii]
 gi|300164998|gb|EFJ31606.1| hypothetical protein SELMODRAFT_87518 [Selaginella moellendorffii]
 gi|300171940|gb|EFJ38540.1| hypothetical protein SELMODRAFT_75308 [Selaginella moellendorffii]
          Length = 113

 Score =  119 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 62/100 (62%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
            K V  AL  I+G+G + + +IC    I  + +++ + +    ++   I +++ VE +L 
Sbjct: 2   NKAVKFALPRIYGVGRRKAAEICAVFGIGDDVKMNSVPDELFNRMMNYIHENHLVEKELA 61

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            +V M+IKRL+ +G YRG RH  GLP+RGQRTHTNA + +
Sbjct: 62  LSVQMDIKRLISIGSYRGYRHTVGLPLRGQRTHTNAMSAR 101


>gi|296040615|gb|ADG85275.1| ribosomal protein S13 [Silene noctiflora]
          Length = 116

 Score =  119 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 71/112 (63%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G  +   K+V  AL  I GIG K    +  +L +    ++ +L + ++ +I + I
Sbjct: 1   MPYISGARLVDDKQVKIALTKISGIGRKKGLQLSARLGLSENIKIKELTKYQIDKIEEII 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           EQ++ V  +L+R+   +I RL+ + CYRG+RH+ GLP+RGQR+HTNART +K
Sbjct: 61  EQEHIVHWELKRSERTDIDRLISISCYRGIRHQDGLPLRGQRSHTNARTSRK 112


>gi|169602162|ref|XP_001794503.1| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15]
 gi|160706096|gb|EAT89165.2| hypothetical protein SNOG_03960 [Phaeosphaeria nodorum SN15]
          Length = 163

 Score =  119 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G N   A  V R+L    GIG K SQ +  K  I P  +V  L  + V+++   +
Sbjct: 1   MVFLNGFNFTEATLVKRSLESFFGIGPKVSQGLMAKFHIHPWAKVGSLKNTTVLELTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
             + ++E DLRR V  NI+RL D+G YRG RH  GLPVRGQRT T   T +K  KG   R
Sbjct: 61  S-NMKIENDLRREVQENIRRLKDMGTYRGRRHAMGLPVRGQRTRTQITTARKLNKGRTRR 119

Query: 121 KR 122
            R
Sbjct: 120 PR 121


>gi|195431724|ref|XP_002063878.1| ribosomal protein S18 [Drosophila willistoni]
 gi|194159963|gb|EDW74864.1| ribosomal protein S18 [Drosophila willistoni]
          Length = 152

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12  ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  TNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|84999324|ref|XP_954383.1| ribosomal protein s18 [Theileria annulata]
 gi|65305381|emb|CAI73706.1| ribosomal protein s18, putative [Theileria annulata]
          Length = 154

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV AL  I G+G + +  +C +  +   +R  +L + E+ ++   I
Sbjct: 14  ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDVTKRAGELTQDEINKLVAII 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     L   +  +++RL  +  +RGLRH  GL  
Sbjct: 74  SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|112984000|ref|NP_001037269.1| ribosomal protein S18 [Bombyx mori]
 gi|49532882|dbj|BAD26676.1| Ribosomal protein S18 [Plutella xylostella]
 gi|54609321|gb|AAV34876.1| ribosomal protein S18 [Bombyx mori]
          Length = 152

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ A+  I G+G + S  +  K  I  ++R  +  E EV +I   +
Sbjct: 12  ILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|260945795|ref|XP_002617195.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238849049|gb|EEQ38513.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 121

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G +I     V   L   I G+G+ ++Q IC K+ I P  R++QL E +++ I + +
Sbjct: 3   VHIFGKSIKHNALVRIGLAKRIFGVGYTTAQQICAKVGIYPRMRMNQLTEPQIMAINKEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D  +EG L++ +  NI++  ++G Y G RH  GLPVRGQRT  NA T K+  +
Sbjct: 63  S-DLTIEGHLKQRILENIQQKKEIGSYAGNRHAAGLPVRGQRTRNNASTAKRLNR 116


>gi|217071380|gb|ACJ84050.1| unknown [Medicago truncatula]
          Length = 152

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++  A+  I GIG + +   C K  +   +R  +L  +E+  I   +
Sbjct: 12  ILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELTVAELENIMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|189208913|ref|XP_001940789.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187976882|gb|EDU43508.1| 40S ribosomal protein S18 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 155

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLTKRAGDLTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154


>gi|327400269|ref|YP_004341108.1| 30S ribosomal protein S13P [Archaeoglobus veneficus SNP6]
 gi|327315777|gb|AEA46393.1| ribosomal protein S13P [Archaeoglobus veneficus SNP6]
          Length = 147

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 23/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K V+ AL  I GIG + ++ I + L I   +++ ++ +  + ++R+ +
Sbjct: 7   IVRIADTDLDGSKSVMFALTGIKGIGLRMAKSIVSALGIDGRQKLGEMDDETIEKLRKFV 66

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E+D                     + +  D+     ++I+ ++ + CYRG+RH RG  VR
Sbjct: 67  EEDIESLPSWLLNRRKDPHTGKDLHLLSKDVDFAKMVDIETMIRMKCYRGIRHARGKKVR 126

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R+ +  G   + RK+
Sbjct: 127 GQRTRSTGRSGRTVG--VIRRKK 147


>gi|330932805|ref|XP_003303916.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1]
 gi|311319761|gb|EFQ87978.1| hypothetical protein PTT_16318 [Pyrenophora teres f. teres 0-1]
          Length = 155

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ ++   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKITGVGRRYSNLVCKKADVDLSKRAGDLTSEELERLVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQVLANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154


>gi|303314875|ref|XP_003067446.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107114|gb|EER25301.1| mitochondrial 37S ribosomal protein SWS2, putative [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 149

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GV+ P  + V ++L    G+G      +  +  + P  R+  L   +V+ I  A+
Sbjct: 31  MVYILGVSFPERQLVSKSLLSFFGVGPSVCARLMARHNVHPTARIGDLANKQVLDITSAL 90

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
             + ++E DLRR +  NI+RL D G YRG RH   LPVRGQRT T  +T  K  
Sbjct: 91  S-NMKIENDLRREILDNIRRLKDTGTYRGRRHALNLPVRGQRTRTQTKTAIKLN 143


>gi|71032473|ref|XP_765878.1| 40S ribosomal protein S18 [Theileria parva strain Muguga]
 gi|68352835|gb|EAN33595.1| 40S ribosomal protein S18, putative [Theileria parva]
          Length = 154

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++VV AL  I G+G + +  +C +  +   +R  +L + E+ ++   I
Sbjct: 14  ILRVLNTNVDGREKVVIALTAIRGVGRRFATVVCKEAGVDITKRAGELTQDEINKLVAII 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     L   +  +++RL  +  +RGLRH  GL  
Sbjct: 74  SSPAEFKVPHWFLNRQKDVKEGKHMHNASNLLDSCLREDLERLKKMRLHRGLRHYWGLRT 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRHGRTV---GVAKKK 154


>gi|292656901|ref|YP_003536798.1| 30S ribosomal protein S13 [Haloferax volcanii DS2]
 gi|291370341|gb|ADE02568.1| ribosomal protein S13 [Haloferax volcanii DS2]
          Length = 167

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 21/133 (15%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   ++   K V R+L  + GIG ++++ I +   +       +L E E+  +   +E 
Sbjct: 22  RIGQTDLDGTKTVERSLTDMKGIGKRTARIIADAAEVDRTALFGKLPEGEIDAVVDVVEN 81

Query: 63  ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                D+    DL      +I R+  +  Y+G+RH+RG  VRGQ
Sbjct: 82  FEDHAPEWMANRRKDFFSGDTDHITGSDLEEKRRHDINRMKMISSYKGVRHQRGQKVRGQ 141

Query: 102 RTHTNARTRKKFG 114
           RT +  RT    G
Sbjct: 142 RTKSTGRTEGTIG 154


>gi|242808625|ref|XP_002485205.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500]
 gi|218715830|gb|EED15252.1| 40S ribosomal protein S13 [Talaromyces stipitatus ATCC 10500]
          Length = 119

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P    V ++L    GIG   S  +  +  I P  ++  L   +V+ I  A+
Sbjct: 1   MVFILGVNFPERNLVKKSLETFFGIGNNVSSRLLARFHIHPTAKIGDLQNQQVLDITAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +  ++E DLRR +  +IKRL D G YRG RH  GLPVRGQ T +  +T  K    
Sbjct: 61  SE-MKIENDLRRQILDDIKRLRDTGTYRGRRHALGLPVRGQNTRSQIKTAYKLNSA 115


>gi|171185873|ref|YP_001794792.1| 30S ribosomal protein S13P [Thermoproteus neutrophilus V24Sta]
 gi|170935085|gb|ACB40346.1| ribosomal protein S13 [Thermoproteus neutrophilus V24Sta]
          Length = 153

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I GIG  ++  IC KL I P   +  L + ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYALAKIRGIGIATAYAICWKLGIDPHAVLGMLTDDQINKLDWAV 67

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + +  +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLNELAPAWFLNRRKDPETGRELHLIGSELVLAAKKDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GV +K+
Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147


>gi|321458683|gb|EFX69747.1| hypothetical protein DAPPUDRAFT_300691 [Daphnia pulex]
          Length = 152

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI    +++ A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRILNTNIDGKIKIMFAVTSIKGVGRRYANVVLKKADIDLTKRAGELSEEEVEKLITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPDWFLNRQKDIKDGKFSQVTSNMLENKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|45190917|ref|NP_985171.1| AER315Cp [Ashbya gossypii ATCC 10895]
 gi|44983985|gb|AAS52995.1| AER315Cp [Ashbya gossypii ATCC 10895]
          Length = 146

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + +  IC K  +   +R  +L + E+ ++ Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLICKKADVDLNKRAGELTQEELERVVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQKDVNDGKDYHSLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|313103638|pdb|3IZ6|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
 gi|22204120|gb|AAM92708.1| putative ribosomal protein S18 [Triticum aestivum]
          Length = 152

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + S  +C K  I   +R  +L   E+ ++   +
Sbjct: 12  ILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   +   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  HNPRQFKVPDWFLNRKKDYKDGRFSQVVSNAVDMKLRDDLERLKKIRNHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|169598492|ref|XP_001792669.1| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
 gi|160704404|gb|EAT90262.2| hypothetical protein SNOG_02050 [Phaeosphaeria nodorum SN15]
          Length = 155

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R   L   E+ +I   I
Sbjct: 14  IIRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLGKRAGDLTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPLQYKIPSWFLNRQRDIVDGKNSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154


>gi|170056800|ref|XP_001864194.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
 gi|167876481|gb|EDS39864.1| 30S ribosomal protein S13P [Culex quinquefasciatus]
          Length = 152

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         ++   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|154316255|ref|XP_001557449.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10]
 gi|156037576|ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980]
 gi|150846499|gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10]
 gi|154697910|gb|EDN97648.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 156

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVEGKQKVMFALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQVLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ + T  R  +     GV++K+
Sbjct: 134 RGQHSKTTGRRGRTV---GVSKKK 154


>gi|328852742|gb|EGG01885.1| hypothetical protein MELLADRAFT_91715 [Melampsora larici-populina
           98AG31]
          Length = 156

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +   C K  +   +R  +L   E+ +I   I
Sbjct: 15  ILRLLNTNVDGRIKIMFALTQIRGVGRRLANVACKKADVDLNKRAGELNPDELERIVTII 74

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPNWFLNRQRDIVDGKSFQVLSNGLDSKMREDLERLKKIRAHRGLRHYWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 135 RGQHTKTTGRRGKTV---GVSKKR 155


>gi|62989829|emb|CAD91307.1| mitochondrial ribosomal protein RPS13 [Wullschlaegelia calcarata]
          Length = 116

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 69/112 (61%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I
Sbjct: 1   MSYISGARSVPDEQVRIASKKMDGIGPKKAIQVRYRLGIRGNIKMNELTKPQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +IKRL+ L  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHFVHWELKRGERADIKRLISLSRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|157124077|ref|XP_001660320.1| 40S ribosomal protein S18 [Aedes aegypti]
 gi|94468520|gb|ABF18109.1| ribosomal protein S18 [Aedes aegypti]
 gi|108874121|gb|EAT38346.1| 40S ribosomal protein S18 [Aedes aegypti]
          Length = 152

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  E EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSEEEVEKIVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         ++   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIIDGKYSQLTSSNVDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|194397653|ref|YP_002036933.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54]
 gi|194357320|gb|ACF55768.1| 30S ribosomal protein S13 [Streptococcus pneumoniae G54]
          Length = 101

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 27  FKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGC 86
             +S+ I     I  + RV  L   +   IR+ ++   +VEGDLRR V +NIKRLM++G 
Sbjct: 7   LATSKKILAAAGISEDVRVRDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGS 65

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           YRG+RHRRGLPVRGQ T  NARTRK        +K+
Sbjct: 66  YRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 101


>gi|288931231|ref|YP_003435291.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642]
 gi|288893479|gb|ADC65016.1| ribosomal protein S13P [Ferroglobus placidus DSM 10642]
          Length = 147

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K +V AL  I GIG + ++ I N L +    ++  L + E+ ++++ +
Sbjct: 7   IVRIADTDLDGNKPLVHALTGIKGIGLRMARAITNHLGLNAREKLGNLSDEEIEKLKKFV 66

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E++                     + +  D+     ++I+RL+ +  YRG+RH +G  VR
Sbjct: 67  EENIEELPSWMLNRRKDLYTGKDLHLLGKDVDLAKKLDIERLIKIRAYRGIRHAKGYKVR 126

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  RT +     GV R++
Sbjct: 127 GQRTRSTGRTGQTV---GVQRRK 146


>gi|56791627|gb|AAW30351.1| ribosomal protein S13 [Calycanthus floridus]
          Length = 109

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 65/107 (60%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G      ++V  A   + GIG K +  +  +L I    ++++L + ++ QI Q I QD+ 
Sbjct: 2   GARSVPDEKVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQIEQMIGQDHV 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 62  VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 108


>gi|255629171|gb|ACU14930.1| unknown [Glycine max]
          Length = 152

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I GIG + +   C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELTAAELDSVMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|209880283|ref|XP_002141581.1| 40S ribosomal protein S18 [Cryptosporidium muris RN66]
 gi|209557187|gb|EEA07232.1| 40S ribosomal protein S18, putative [Cryptosporidium muris RN66]
          Length = 153

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V+ AL  I GIG + S  +C K  +   +R  QL + EV +I   +
Sbjct: 13  ILRIMNTNVDGRQKVMYALTAIKGIGRRFSNIVCKKADVDLRKRAGQLTQDEVNRIVAIV 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +    +L  ++  +++RL  +  +RGLRH  G+ V
Sbjct: 73  TNPLQFNIPSYMLNRQRDLKDGKYKHMTSNNLEASLREDLERLKKIRSHRGLRHHWGIRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +        +K+
Sbjct: 133 RGQHTKTTGRGCR---VASSGKKK 153


>gi|253795633|ref|YP_003038729.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739941|gb|ACT34276.1| putative 30S ribosomal subunit protein S13 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 118

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/104 (46%), Positives = 62/104 (59%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
            +P  K+V  AL  +HG+G   +  +   LA+P   R  QL   +   I + +E +  VE
Sbjct: 2   ELPEHKQVWVALQRVHGVGPHVATCVLRALAVPLRLRTAQLTRLQRDAITRVLEDELVVE 61

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           G LR  V  +I +L  +GCYRGLRHR GLPVRGQRT TNA TRK
Sbjct: 62  GGLRLKVRADINKLRRMGCYRGLRHRLGLPVRGQRTRTNAHTRK 105


>gi|61654738|gb|AAX48895.1| S18 [Suberites domuncula]
          Length = 152

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++  L  I G+G + +  +  K  +   +R  +L E E+ ++   +
Sbjct: 12  ILRVLNTNIDGHQKIMFGLTAIKGVGRRYANLVLKKADVDMNKRAGELSEEEIERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRQYKIPDWFLNRQKDHRDGKYSQILANQLEHKLREDLERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|168004052|ref|XP_001754726.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694347|gb|EDQ80696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKVPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++KR
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152


>gi|168024894|ref|XP_001764970.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683779|gb|EDQ70186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++KR
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152


>gi|301117146|ref|XP_002906301.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
 gi|262107650|gb|EEY65702.1| 40S ribosomal protein S18 [Phytophthora infestans T30-4]
          Length = 152

 Score =  118 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  AL  I G+G + S  +C K  +   +R  +L   E+ ++   I
Sbjct: 12  ILRILNTNIDGRRKVWVALTAIQGVGRRFSIMVCKKAEVDVTKRAGELTNDEIERVVAII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V  +L+     + +RL  +  +RGLRH  GL V
Sbjct: 72  QNPLQFKIPVWFLNRQKDFKTGKHSQVVANNLQGKWREDYERLKKIYAHRGLRHWWGLKV 131

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 132 RGQHTKTTGRRGRTVG 147


>gi|56791637|gb|AAW30356.1| ribosomal protein S13 [Platanus occidentalis]
          Length = 108

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 64/107 (59%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G      ++V  A   + GIG K +  +  +L I    ++ +L + ++ QI Q I QD+ 
Sbjct: 2   GARSVPDEQVRIASTKMDGIGPKKAIQVRYQLGISGNIKIRELTKYQIDQIEQMIGQDHV 61

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 62  VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTCRK 108


>gi|41615251|ref|NP_963749.1| 30S ribosomal protein S13P [Nanoarchaeum equitans Kin4-M]
 gi|74579692|sp|Q74M95|RS13_NANEQ RecName: Full=30S ribosomal protein S13P
 gi|40068975|gb|AAR39310.1| NEQ467 [Nanoarchaeum equitans Kin4-M]
          Length = 153

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +  IA V++   K +   L  + G+ +  +  +C  L I   R++  L + E+ ++  A+
Sbjct: 13  IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDAL 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  D + T+  +IKR M +  +RG RHR GLPV
Sbjct: 73  RNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT ++ R  +     GV +K+
Sbjct: 133 RGQRTRSHHRKGRTV---GVIKKK 153


>gi|168049335|ref|XP_001777119.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671562|gb|EDQ58112.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDHKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++KR
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152


>gi|67528950|ref|XP_662072.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4]
 gi|40741043|gb|EAA60233.1| hypothetical protein AN4468.2 [Aspergillus nidulans FGSC A4]
          Length = 130

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 3/116 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN P  +   ++L    G+G + S  I ++  I    +V +L   +V+ +   +
Sbjct: 1   MVFILGVNFPEGQL--KSLQKFFGVGPQVSSRIMSRFHIHQTCKVGELANKQVLDLTAVL 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
            +  ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT  N +   +  + 
Sbjct: 59  SE-MKIENDLRRQVLDDIKRLKETGTYRGRRHALGLPVRGQRTRNNNKIAIRLNRA 113


>gi|255629053|gb|ACU14871.1| unknown [Glycine max]
          Length = 152

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I GIG + +   C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADVDMNKRAGELSAAELDSVMTVV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|195057283|ref|XP_001995231.1| GH23036 [Drosophila grimshawi]
 gi|193899437|gb|EDV98303.1| GH23036 [Drosophila grimshawi]
          Length = 162

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 22  ILRIMSTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 81

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                         +L   +  +++RL  +  +RGLRH  GL V
Sbjct: 82  SNPLQYKVPNWFLNRQKDIIDGKYSQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 141

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 142 RGQHTKTTGRRGRTV---GVSKKK 162


>gi|159145774|gb|ABW90424.1| putative ribosomal protein S18 [Barentsia elongata]
          Length = 154

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +  K  +   +R  +L + EV  +   I
Sbjct: 12  ILRVMNTNIDGRIKIMYALTAIKGVGRRYANLVLKKADVDLRKRAGELTDEEVEAVVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  NNPKQYKIPNWFLNRQKDIKDGKYMQVTSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|328767380|gb|EGF77430.1| hypothetical protein BATDEDRAFT_91663 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 165

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I GIG + +  +  K  I   +R  ++   E+ ++   +
Sbjct: 24  IIRLLNTNIDGKRKIMYALTSIKGIGRRYANLVLKKADIDLNKRAGEVTNDELERVVTIM 83

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 84  QNPRQYKIPDWFLNRQKDIKDGKYTQVIANALDNKLREDLERLKKIRAHRGLRHYWGVRV 143

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 144 RGQHTKTTGRRGRTV---GVSKKK 164


>gi|118431572|ref|NP_148134.2| 30S ribosomal protein S13P [Aeropyrum pernix K1]
 gi|32363509|sp|Q9YB60|RS13_AERPE RecName: Full=30S ribosomal protein S13P
 gi|116062897|dbj|BAA80738.2| 30S ribosomal protein S13P [Aeropyrum pernix K1]
          Length = 150

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAGV+I    ++   L  I GIG+ ++  +   L + PE++V  L E E+ ++ + +
Sbjct: 10  IVRIAGVDIDGDLKLPYGLASIKGIGYTTAMAVIRMLGLDPEKKVGFLTEEEIRRLDEVL 69

Query: 61  ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY+   DL             +I+R M +G +RG+RH+ GL V
Sbjct: 70  RDITQLGLPKWLYNRRKDYETGKDLHLIGSELIFYARRDIEREMKIGSWRGIRHKYGLKV 129

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R        GV +KR
Sbjct: 130 RGQRTRTTGRLGMTI---GVRKKR 150


>gi|56791631|gb|AAW30353.1| ribosomal protein S13 [Laurus nobilis]
          Length = 115

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 65/107 (60%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G      ++V  A   + GIG K +  +  +L I    ++++L + ++ Q+ Q I QD+ 
Sbjct: 6   GARSVPDEQVRIASTKMDGIGPKKAIQVRYRLGISGNIKMNELTKYQIDQMEQMIGQDHV 65

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           V  +L+R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 66  VHWELKRGERADIERLISISRYRGIRHQDGSPLRGQRTHTNARTFRK 112


>gi|116783572|gb|ABK23001.1| unknown [Picea sitchensis]
 gi|116784761|gb|ABK23462.1| unknown [Picea sitchensis]
 gi|116785907|gb|ABK23903.1| unknown [Picea sitchensis]
 gi|116790495|gb|ABK25635.1| unknown [Picea sitchensis]
 gi|116792192|gb|ABK26268.1| unknown [Picea sitchensis]
 gi|116792691|gb|ABK26459.1| unknown [Picea sitchensis]
 gi|116793924|gb|ABK26933.1| unknown [Picea sitchensis]
 gi|148907687|gb|ABR16972.1| unknown [Picea sitchensis]
 gi|148908291|gb|ABR17259.1| unknown [Picea sitchensis]
 gi|224284844|gb|ACN40152.1| unknown [Picea sitchensis]
          Length = 152

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L   E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKRAGELTALELENLMIIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPKQFKIPDWFLNRQKDIKDGRTTQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|124027412|ref|YP_001012732.1| 30S ribosomal protein S13P [Hyperthermus butylicus DSM 5456]
 gi|158706239|sp|A2BK76|RS13_HYPBU RecName: Full=30S ribosomal protein S13P
 gi|123978106|gb|ABM80387.1| 30S ribosomal protein S13p [Hyperthermus butylicus DSM 5456]
          Length = 151

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP   +V   L  + GIG   +  +C  L I P +R+  L ++E+ +I +A+
Sbjct: 10  IVRILGTDIPGDLKVPYGLALVKGIGVNLAYALCRLLGIDPNKRIGFLTDAEIEKIEKAM 69

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  ANPLAIGIPVWMLNRRKDYETGKDLHLVGADLIYYVKRDIEREKRIRSWRGIRHALGLKV 129

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT T  R     G
Sbjct: 130 RGQRTATTGRIGMTIG 145


>gi|119872422|ref|YP_930429.1| 30S ribosomal protein S13P [Pyrobaculum islandicum DSM 4184]
 gi|158706269|sp|A1RT04|RS13_PYRIL RecName: Full=30S ribosomal protein S13P
 gi|119673830|gb|ABL88086.1| SSU ribosomal protein S13P [Pyrobaculum islandicum DSM 4184]
          Length = 153

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  +L  I GIG  ++  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYSLTKIRGIGIATAYAICRKLGIDPHAILGALSEEQINKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++                     +  +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGKDLHLIGAELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GV +K+
Sbjct: 128 GQRTVTTGRLG---PVAGVTKKK 147


>gi|91772118|ref|YP_564810.1| 30S ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
 gi|121684548|sp|Q12ZR6|RS13_METBU RecName: Full=30S ribosomal protein S13P
 gi|91711133|gb|ABE51060.1| SSU ribosomal protein S13P [Methanococcoides burtonii DSM 6242]
          Length = 148

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            RI   ++   K V  AL  I GIG ++S+ I +   I P   +  L + ++ ++   I 
Sbjct: 10  VRIMNTDLQGKKPVKYALTGIRGIGLRTSRVIVDSTGIDPNAVIGYLSDEDIKKLDSTID 69

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  + +  D+  T+  ++  L     YRGLRH RGL VRG
Sbjct: 70  KFEEQLPKWMLNRQFDPLTGENKHLLGQDIILTLKEDLNDLKKSRAYRGLRHERGLKVRG 129

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV +K+
Sbjct: 130 QRTKSTGRRGSTI---GVRKKK 148


>gi|124783098|gb|ABN14904.1| ribosomal protein S18 [Taenia asiatica]
          Length = 152

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 12  ILRVMNTNIDGQRKITYALTAIKGVGRRYATVVCKKADVDIRKRAGELTDDEIEKIVTVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQYKIPNWFLNRQKDIEDGKHTQLLAQGLDSKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|213406555|ref|XP_002174049.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|213409073|ref|XP_002175307.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|212002096|gb|EEB07756.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
 gi|212003354|gb|EEB09014.1| 40S ribosomal protein S18 [Schizosaccharomyces japonicus yFS275]
          Length = 152

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I G+G + +   C K  +   +R  +L   E+ ++   +
Sbjct: 12  ILRLLNTNVDGKNKVMYALTQIKGVGRRYANIACKKADVDMSKRAGELTTEELERLVTIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  ++   +  +++RL  +  +RGLRH   L V
Sbjct: 72  QNPTQFKIPAWFLNRQKDITDGKSYQLLANNVDSKLRDDLERLKKIQAHRGLRHALDLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++K+
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKK 152


>gi|50288491|ref|XP_446675.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525983|emb|CAG59602.1| unnamed protein product [Candida glabrata]
          Length = 147

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + +  +C K  +   +R  +L + E+ ++ Q +
Sbjct: 15  ILRLLNTNVDGNIKIVYALTTIKGVGRRYANLVCKKADVDLNKRAGELTQEELERVVQIM 74

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   +   +  +++RL  +  +RG+RH  GL V
Sbjct: 75  QNPTQYKIPAWFLNRQRDIADGKDYHTLANQVESKLRDDLERLKKIRAHRGIRHFWGLRV 134

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 135 RGQHTKTTGRRR 146


>gi|254582072|ref|XP_002497021.1| ZYRO0D13574p [Zygosaccharomyces rouxii]
 gi|238939913|emb|CAR28088.1| ZYRO0D13574p [Zygosaccharomyces rouxii]
          Length = 146

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +VV AL  I G+G + +  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKVVYALTTIKGVGRRYANLVCKKADVDLSKRAGELTQEELERIVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   +   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTQYKIPTWFLSRQKDVNDGKDHHMLANGVESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRKR 145


>gi|168004046|ref|XP_001754723.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168049271|ref|XP_001777087.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|168052464|ref|XP_001778670.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669988|gb|EDQ56565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671530|gb|EDQ58080.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694344|gb|EDQ80693.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 152

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I G+G + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGVGRRFANLVCKKADVDMSKRAGELSAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRKKDHKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++KR
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKR 152


>gi|39941500|ref|XP_360287.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
 gi|59802871|gb|AAX07649.1| 40S ribosomal protein S18-like protein [Magnaporthe grisea]
 gi|145022352|gb|EDK06372.1| 40S ribosomal protein S18 [Magnaporthe oryzae 70-15]
          Length = 156

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++V AL  I G+G + S  +  K  +   +R  +L   E+ ++   +
Sbjct: 14  ILRLLNTNVDGKQKIVYALTKIKGVGRRYSNLVVKKADVDLNKRAGELTSEELERVVTIL 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPSWFLNRQRDIVDGKDSQTLANGVDSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|6320658|ref|NP_010738.1| Rps18ap [Saccharomyces cerevisiae S288c]
 gi|6323615|ref|NP_013686.1| Rps18bp [Saccharomyces cerevisiae S288c]
 gi|1350951|sp|P35271|RS18_YEAST RecName: Full=40S ribosomal protein S18
 gi|313103676|pdb|3IZB|M Chain M, Localization Of The Small Subunit Ribosomal Proteins Into
           A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
           Translating 80s Ribosome
 gi|315113459|pdb|3O2Z|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The First 80s In The Asymmetric Unit.
 gi|315113487|pdb|3O30|L Chain L, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
           Of The Second 80s In The Asymmetric Unit.
 gi|575693|emb|CAA86629.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|927725|gb|AAB64891.1| Ydr450wp [Saccharomyces cerevisiae]
 gi|151942415|gb|EDN60771.1| ribosomal protein S18A [Saccharomyces cerevisiae YJM789]
 gi|151946135|gb|EDN64366.1| ribosomal protein S18B [Saccharomyces cerevisiae YJM789]
 gi|190408214|gb|EDV11479.1| ribosomal protein S18A [Saccharomyces cerevisiae RM11-1a]
 gi|259145683|emb|CAY78947.1| Rps18ap [Saccharomyces cerevisiae EC1118]
 gi|259148549|emb|CAY81794.1| Rps18bp [Saccharomyces cerevisiae EC1118]
 gi|285811461|tpg|DAA12285.1| TPA: Rps18ap [Saccharomyces cerevisiae S288c]
 gi|285813977|tpg|DAA09872.1| TPA: Rps18bp [Saccharomyces cerevisiae S288c]
          Length = 146

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|47570247|ref|ZP_00240898.1| ribosomal protein S13p/S18e [Bacillus cereus G9241]
 gi|47553071|gb|EAL11471.1| ribosomal protein S13p/S18e [Bacillus cereus G9241]
          Length = 97

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/93 (51%), Positives = 64/93 (68%), Gaps = 1/93 (1%)

Query: 30  SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89
           ++ I  +  I  E RV  L E E+ +IR  I++  +VEGDLRR V++NIKRLM++G YRG
Sbjct: 6   AEKILAEAGISEETRVRDLTEDELGRIRDIIDR-IKVEGDLRREVSLNIKRLMEIGSYRG 64

Query: 90  LRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           LRHRRGLPVRGQ +  NARTRK   +    +K+
Sbjct: 65  LRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 97


>gi|19113298|ref|NP_596506.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe 972h-]
 gi|162312104|ref|NP_588057.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|6831658|sp|O94754|RS18_SCHPO RecName: Full=40S ribosomal protein S18
 gi|4481957|emb|CAB38515.1| 40S ribosomal protein S18 [Schizosaccharomyces pombe]
 gi|157310505|emb|CAB58414.2| 40S ribosomal protein S18 (predicted) [Schizosaccharomyces pombe]
          Length = 152

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ A+  I G+G + +  +C K  I   +R  +L   E+ +I   I
Sbjct: 12  ILRLLNTNVDGKVKVMFAMTQIKGVGRRYANIVCKKADIDMSKRAGELTTEELERIVTII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  ++   +  +++RL  +  +RGLRH   L V
Sbjct: 72  QNPSQFKIPSWFLNRQKDINDGKSFQLLANNVDSKLREDLERLKKIQTHRGLRHALDLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++K+
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKK 152


>gi|297842551|ref|XP_002889157.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334998|gb|EFH65416.1| hypothetical protein ARALYDRAFT_476938 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 154

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+    +P    +   L  ++GIG + S  +   L I   +    L   E+I +R+ + Q
Sbjct: 33  RVGNAEVPNNMPLKTGLQAVYGIGRRKSHQVLCHLGI-TNKLARDLTGKELIDLREEVGQ 91

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +Q   +LRR V   I+RL+++ CYRG RHR G+P RGQRT TNART+K        +K+
Sbjct: 92  -HQHGDELRRRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKAVAIAGKKK 150


>gi|58259960|ref|XP_567390.1| ribosomal protein S18 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134116184|ref|XP_773263.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255885|gb|EAL18616.1| hypothetical protein CNBJ0410 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229440|gb|AAW45873.1| ribosomal protein S18, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 155

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   + + +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPSWFLNRQRDISDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R   + G+    +K+
Sbjct: 135 RGQHTKTTGR---RVGRAVAGKKK 155


>gi|282164925|ref|YP_003357310.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
 gi|282157239|dbj|BAI62327.1| 30S ribosomal protein S13P [Methanocella paludicola SANAE]
          Length = 225

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            RI   ++    +V+ AL  I GIG + S+ +  K  + P   +  L   +V ++R A+ 
Sbjct: 72  VRIQNTDLDGTSKVLYALTGIKGIGIRVSKMLARKAEVDPNAIMGYLPPEQVDRLRNALE 131

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  +    DL  +   +I  +  +  Y+G+RH RG  VRG
Sbjct: 132 NIDTNMPVWMLNRRNDTYTGENRHLTGTDLILSNKEDINLMKKIRSYKGIRHERGQKVRG 191

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  RT       GV RK+
Sbjct: 192 QRTRSTGRTGATV---GVVRKK 210


>gi|159145688|gb|ABW90381.1| putative ribosomal protein S18 [Sipunculus nudus]
          Length = 152

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +C K  +   +R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGKRKIAFAMTAIKGVGRRYATIVCKKADVDVTKRAGELSDDEVEKLITVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPNWFLNRQKDVKDGKFSQVMSNQLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|50305489|ref|XP_452704.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641837|emb|CAH01555.1| KLLA0C11297p [Kluyveromyces lactis]
          Length = 137

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + +   L    +GIG K+++ IC+KL   P  R+HQL E +V+ I   +
Sbjct: 3   VHILGKGFKGKEIIKIGLASKFYGIGLKTAEKICSKLGFYPWMRMHQLTEPQVMAITSEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  +EGD R  V  NI     +G Y G+RH  GLPVRGQRT  NA+  ++  K
Sbjct: 63  -ANMTIEGDARAIVKENIALKRSIGSYEGMRHALGLPVRGQRTRNNAKVARRLNK 116


>gi|256270865|gb|EEU06003.1| Rps18bp [Saccharomyces cerevisiae JAY291]
          Length = 146

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTHYKIPAWFLNRQNDITNGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRRR 145


>gi|302410605|ref|XP_003003136.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
 gi|261358160|gb|EEY20588.1| 40S ribosomal protein S18 [Verticillium albo-atrum VaMs.102]
          Length = 156

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVHSKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|84508531|ref|YP_448695.1| ribosomal protein S13 [Dictyota dichotoma]
 gi|45925699|gb|AAS79080.1| ribosomal protein S13 [Dictyota dichotoma]
          Length = 115

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I G +    K V+ +L YI GIG   S+ +CNK  I  + R   +   ++  +   I
Sbjct: 1   MSYIVGTSFSAEKSVLFSLSYIFGIGSYRSRILCNKSGIGLDCRFCDIDYDQIRILENLI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E   +++   L +     I+R   + CYRGLRH+RGLPVRGQRTHTNA+ R    
Sbjct: 61  EASSFRLGQSLEKYQIERIRRFYGIMCYRGLRHKRGLPVRGQRTHTNAKRRSTVK 115


>gi|126459585|ref|YP_001055863.1| 30S ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548]
 gi|158706268|sp|A3MUT0|RS13_PYRCJ RecName: Full=30S ribosomal protein S13P
 gi|126249306|gb|ABO08397.1| SSU ribosomal protein S13P [Pyrobaculum calidifontis JCM 11548]
          Length = 153

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++                     +  +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GV +K+
Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147


>gi|310798436|gb|EFQ33329.1| ribosomal protein S13/S18 [Glomerella graminicola M1.001]
          Length = 156

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVRGQEKVMYALTKISGVGRRYSNIVCKKADVDLNKRAGELTSEELERIVTII 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QNPTQYKIPGWFLNRQRDIVDGKDSQILANGVASKLRDDLERLKKIRAHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|70994567|ref|XP_752061.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293]
 gi|66849695|gb|EAL90023.1| 40S ribosomal protein S13 [Aspergillus fumigatus Af293]
 gi|159125025|gb|EDP50142.1| 40S ribosomal protein S13 [Aspergillus fumigatus A1163]
          Length = 169

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)

Query: 2   ARIAGVNIPRAKRVV----------------RALCYIHGIGFKSSQDICNKLAIPPERRV 45
             I GVN P    V                 ++L    G+G + S  +  +  I P  +V
Sbjct: 22  VFILGVNFPERNLVKASASLSQRLRPPGHFSKSLETFFGVGPQVSARLLARFHIHPTCKV 81

Query: 46  HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
            +L   +V+ +  A+  D ++E DLRR +  +IKRL + G YRG RH  GLPVRGQRT T
Sbjct: 82  GELANKQVLDLTAALS-DMKIENDLRRQILDDIKRLKESGSYRGRRHALGLPVRGQRTRT 140

Query: 106 NARTRK 111
            A   K
Sbjct: 141 QAENAK 146


>gi|321263256|ref|XP_003196346.1| ribosomal protein S18 [Cryptococcus gattii WM276]
 gi|317462822|gb|ADV24559.1| ribosomal protein S18, putative [Cryptococcus gattii WM276]
          Length = 155

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + +  +C K  +   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVKGGGKIMYALTEIKGVGRRYANLVCKKADVDLNKRAGELNSDELERIVTIM 74

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   + + +  +++RL  +  +RGLRH  GL V
Sbjct: 75  QNPAQFKIPSWFLNRQRDITDGKSQHILSNVIDQRLREDLERLKKIRTHRGLRHHWGLKV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R   + G+    +K+
Sbjct: 135 RGQHTKTTGR---RVGRAVAGKKK 155


>gi|76802056|ref|YP_327064.1| 30S ribosomal protein S13P [Natronomonas pharaonis DSM 2160]
 gi|121724406|sp|Q3IQT9|RS13_NATPD RecName: Full=30S ribosomal protein S13P
 gi|76557921|emb|CAI49505.1| ribosomal protein S13 [Natronomonas pharaonis DSM 2160]
          Length = 170

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  ++GIG + ++ I  K  +     +  L E ++  +  A+
Sbjct: 18  FVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVVAAV 77

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E+                      +++  DL+ +   +I R+  +  YRG+RH+RG  VR
Sbjct: 78  EEYGDEVPEWLTNHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVR 137

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 138 GQRTKSTGRTEGTIG 152


>gi|289580104|ref|YP_003478570.1| ribosomal protein S13P [Natrialba magadii ATCC 43099]
 gi|289529657|gb|ADD04008.1| ribosomal protein S13P [Natrialba magadii ATCC 43099]
          Length = 171

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ I  K  +       +L E  + ++   +
Sbjct: 17  FVRIGQTDLDGTKSVERSLSEMNGIGRRTARLIAEKAGVDRTATFGRLDEDVIDEVVTLV 76

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       +++  DL+ +   +I R+  +  Y+G+RH+RG  VR
Sbjct: 77  ENYAEEVPDWLNNRQNDFYSGETTHEIGNDLQLSRQHDINRMKMIDSYKGVRHKRGQKVR 136

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 137 GQRTKSTGRTEGTIG 151


>gi|323455964|gb|EGB11831.1| hypothetical protein AURANDRAFT_20379 [Aureococcus anophagefferens]
          Length = 154

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 22/138 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G+G + S  +C K A+   +R  +L   EV ++   I
Sbjct: 15  ILRVLNTNIDGRRKVMFALTSIPGVGRRFSNVVCKKAAVDAHKRAGELTADEVEKLVAII 74

Query: 61  ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+           L++ +  +++RL  +  +RGLRH  G+ V
Sbjct: 75  QNPKQFKIPAWFLNRQKDYKTGKYSQAFANTLQQKLREDLERLKKIRAHRGLRHYWGIRV 134

Query: 99  RGQRTHTNARTRKKFGKG 116
           RGQ T +  R  K     
Sbjct: 135 RGQHTKSTGRRGKTMAAT 152


>gi|186920119|ref|YP_001874773.1| ribosomal protein S13 [Hemiselmis andersenii]
 gi|186461065|gb|ACC78227.1| ribosomal protein S13 [Hemiselmis andersenii]
          Length = 113

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I  VN+   KRV   +  ++GIG   +   CN+L I  +  V  L ++ +  + + I
Sbjct: 1   MVYILSVNLKSNKRVYFEVAKLYGIGRYQAIQFCNQLNIGFDCYVKDLNQAYLYALLKQI 60

Query: 61  E-QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           E Q+  V+  L+      I  L+D+  YRG+RH   LPVRGQRT TNAR+RK+
Sbjct: 61  EHQNLIVDTMLQDQQKKIISELIDIKAYRGVRHIFRLPVRGQRTRTNARSRKR 113


>gi|154151764|ref|YP_001405382.1| 30S ribosomal protein S13P [Candidatus Methanoregula boonei 6A8]
 gi|154000316|gb|ABS56739.1| ribosomal protein S13 [Methanoregula boonei 6A8]
          Length = 153

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 24/142 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI   ++   K V  AL  I GIG  +S  I     +    ++  L E  V +IR A+E
Sbjct: 11  VRIGTTDLDGTKSVRVALTGIKGIGRHTSTVISRMAKVDEYAKLGLLDEESVNRIRAAVE 70

Query: 62  Q---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +                      + + GD+      +I  +  + CY+G+RH  G  VRG
Sbjct: 71  KYATSIPMWMANRPKDLYTGENKHLIGGDVALARDEDINMMRKIRCYKGIRHETGQKVRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  RT       GV++K+
Sbjct: 131 QRTKSTGRTGTTV---GVSKKK 149


>gi|226348810|gb|ACO50714.1| ribosomal protein S13 [Micromonas pusilla CCMP1545]
          Length = 118

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 62/115 (53%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M      N+   + +  AL  ++G+G  ++Q +C++L   P+     L      Q+ + +
Sbjct: 1   MVFFMHTNLKADRPIRLALTQVYGLGPSTAQQLCDQLGFHPKMTTGSLKAGHWDQLARIV 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
              +    +L+R  A +I+R + +  Y+G R  +GLP+RGQRTHTNART +K  +
Sbjct: 61  SAYHITGAELKRVQAEDIQRTVRMSSYKGFRFTQGLPLRGQRTHTNARTARKHRR 115


>gi|241957179|ref|XP_002421309.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36]
 gi|223644653|emb|CAX40643.1| 40S ribosomal protein (S18), putative [Candida dubliniensis CD36]
 gi|238883265|gb|EEQ46903.1| 40S ribosomal protein S18 [Candida albicans WO-1]
          Length = 145

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|320587800|gb|EFX00275.1| 40S ribosomal protein s18 [Grosmannia clavigera kw1407]
          Length = 156

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++VV AL  + G G + +  +  K  I    R  +L   ++ +I   +
Sbjct: 14  IIRLLNTNIDGKQKVVYALTKVKGCGRRYANIVAKKADIDLNLRAGELTAEQLERIVSIL 73

Query: 61  EQDYQ--------------VEGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q              V+G   +         +  +++RL  +  +RGLRH  GL V
Sbjct: 74  QSPTQYKIPSWFLNRQRDIVDGKDSQILANGVDSKLREDLERLKKIRSHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVSKKK 154


>gi|257388629|ref|YP_003178402.1| 30S ribosomal protein S13P [Halomicrobium mukohataei DSM 12286]
 gi|257170936|gb|ACV48695.1| ribosomal protein S13 [Halomicrobium mukohataei DSM 12286]
          Length = 178

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ I  K  +  +     L + ++  + + +
Sbjct: 20  FVRIGQTDLDGTKSVERSLTDMNGIGKRAARIIAEKAGVDRQALFGALDDEDIEAVVEKV 79

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       +++  DL+     ++ R+  +  Y+G+RH+RG  VR
Sbjct: 80  EGYADEVPEWLTNHQNDFYSGETTHEIGNDLQMQRRADVNRMQMIDSYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 140 GQRTKSTGRTEGTIG 154


>gi|40287492|gb|AAR83860.1| putative ribosomal protein [Capsicum annuum]
          Length = 152

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I GIG + +   C K  I   +R  +L  +E+  +   +
Sbjct: 12  ILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMNKRAGELSAAELDSLMVVV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+           L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|18313810|ref|NP_560477.1| 30S ribosomal protein S13P [Pyrobaculum aerophilum str. IM2]
 gi|32363374|sp|Q8ZTV0|RS13_PYRAE RecName: Full=30S ribosomal protein S13P
 gi|18161371|gb|AAL64659.1| ribosomal protein S13 [Pyrobaculum aerophilum str. IM2]
          Length = 152

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I GIG  S+  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++                     +  +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GV +K+
Sbjct: 128 GQRTVTTGRFGAT---AGVTKKK 147


>gi|307595928|ref|YP_003902245.1| 30S ribosomal protein S13P [Vulcanisaeta distributa DSM 14429]
 gi|307551129|gb|ADN51194.1| ribosomal protein S13P [Vulcanisaeta distributa DSM 14429]
          Length = 160

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC  L I P  R+ QL +  V ++  A+
Sbjct: 8   IVRIGDTDLDGFKPVAYALTKIRGIGISTAYAICRYLGINPSIRLGQLDDETVRKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              +Q                     +  DL      +I  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHQFAPGWFVNRPKDPETGRNIHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127

Query: 100 GQRTHTNARTRKKFG 114
           GQRT T  R     G
Sbjct: 128 GQRTRTTGRLGLTVG 142


>gi|157690762|tpe|CAL69108.1| TPA: putative 40S ribosomal protein S18 [Spadella cephaloptera]
          Length = 154

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ A+  I G G + S  +C K  +   +R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGRRKIMFAMTSIKGCGRRFSNIVCKKADVDMTKRAGELSDEEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  NNPRQYKIPDWFLNRQKDVKDGKYSQVLSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R        GV++K+
Sbjct: 132 RGQHTKTTGRRGCTV---GVSKKK 152


>gi|322706012|gb|EFY97594.1| 30S ribosomal protein S13 [Metarhizium anisopliae ARSEF 23]
          Length = 119

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  +   +
Sbjct: 1   MVFILGVNFNDGKLVKKALESFYALGSTTSSRIMAKYSIHKLAKVGSLSPRTVTSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 61  SQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHAMGLPVRGQRTRTQTATANKLNR 114


>gi|320582685|gb|EFW96902.1| putative DnaJ-like heat-shock protein [Pichia angusta DL-1]
          Length = 949

 Score =  116 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 17  RALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
             L +   G+G K+++ IC K+ + P  R+HQL E++V+ + + +  D  +   L + V 
Sbjct: 846 IGLAHTFFGVGLKTAEKICAKVGLYPSMRMHQLNETQVMAVTKELT-DMTIGSRLLQQVR 904

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            NIK     G Y+GLRH  GLPV GQRT  NART ++  K
Sbjct: 905 SNIKLKRATGSYQGLRHAMGLPVHGQRTKYNARTARRLNK 944


>gi|121512018|gb|ABM55460.1| ribosomal protein S18 [Xenopsylla cheopis]
          Length = 152

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   ++V+ A+  I G+G + +  +  K  +   +R  +  E EV +I   +
Sbjct: 12  ILRIMSTNIDGKRKVMFAMTAIKGVGRRYANIVLKKADVDLNKRAGECTEEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                          L   +  +++R+  +  +RG+RH  GL V
Sbjct: 72  STPRQFKIPDWFLNRQKDIVDGRYSQLTSSSLDSKLREDLERMKKIKAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|158289973|ref|XP_311570.4| AGAP010375-PA [Anopheles gambiae str. PEST]
 gi|157018416|gb|EAA07206.5| AGAP010375-PA [Anopheles gambiae str. PEST]
          Length = 152

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   I
Sbjct: 12  ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITII 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                         ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|66359256|ref|XP_626806.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
           Iowa II]
 gi|67616771|ref|XP_667506.1| ribosomal protein S18 [Cryptosporidium hominis TU502]
 gi|46228176|gb|EAK89075.1| ribosomal protein S18A, rps18ap, HhH domain [Cryptosporidium parvum
           Iowa II]
 gi|54658642|gb|EAL37270.1| ribosomal protein S18 [Cryptosporidium hominis]
          Length = 153

 Score =  116 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++++ AL  I GIG + S  +C K  +   +R  QL + E+ +I   +
Sbjct: 13  ILRIMNTNVDGRQKIMYALTAIKGIGRRFSNIVCKKADVNLSKRAGQLSQEEINRIVAIV 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +    +L  ++  +++RL  +  +RGLRH  G+ V
Sbjct: 73  ANPLQFNIPSYMLNRQKDVKDGKYKHITSNNLEASLREDLERLKKIRSHRGLRHHWGVRV 132

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 133 RGQHTKTTGR 142


>gi|126134141|ref|XP_001383595.1| hypothetical protein PICST_57353 [Scheffersomyces stipitis CBS
           6054]
 gi|126095744|gb|ABN65566.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 122

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             + G +I     V   L   I GIG+++++ IC K+ I P+ R++QL E +++ + + I
Sbjct: 3   VHVFGKSIKHNSLVRIGLAKAIFGIGYQTAERICAKVGIYPQMRMNQLSEPQIMDLNKEI 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D  VEG L++ +  +I+   D+G Y G RH +GLPVRGQ T  NA T  K  K
Sbjct: 63  S-DLLVEGHLKQKINNDIRMKRDIGSYSGFRHAQGLPVRGQGTRNNAATAGKLNK 116


>gi|76573321|gb|ABA46765.1| unknown [Solanum tuberosum]
          Length = 152

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ A+  I GIG + +   C K  I   +R  +L  +E+  +   +
Sbjct: 12  ILRVQNTNVDGKQKIMFAMTSIKGIGRRFANIACKKADIDMSKRAGELTAAELDSLMVVV 71

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+           L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  ANPRQFKIPDWFLNRQKDYKDGKFSQVTSNALDMKLRDDLERLKKIRNHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV++KR
Sbjct: 132 RGQHTKTTGRRGKTV---GVSKKR 152


>gi|17542018|ref|NP_502794.1| Ribosomal Protein, Small subunit family member (rps-18)
           [Caenorhabditis elegans]
 gi|3881192|emb|CAB16517.1| C. elegans protein Y57G11C.16, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 154

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  +   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELTEEDFDKIVTIMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   +   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|328899750|gb|AEB54647.1| ribosomal protein S18 [Procambarus clarkii]
          Length = 152

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ A+  I G+G + S  +  K  I   +R  ++ E EV +I   +
Sbjct: 12  ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +  +L   +  +++R+  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|255717919|ref|XP_002555240.1| KLTH0G04664p [Lachancea thermotolerans]
 gi|238936624|emb|CAR24803.1| KLTH0G04664p [Lachancea thermotolerans]
          Length = 146

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    ++V AL  I G+G + +  +C K  +  ++R  +L + E+ +I Q +
Sbjct: 14  ILRLLNTNVDGNIKIVYALTTIRGVGRRYANLVCKKADVSLQKRAGELTQEELERIVQIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTQYKIPAWFLNRQKDVNDGKDYHNLANNLESKLRDDLERLKKIRAHRGIRHFWGLRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R R
Sbjct: 134 RGQHTKTTGRKR 145


>gi|268534940|ref|XP_002632603.1| C. briggsae CBR-RPS-18 protein [Caenorhabditis briggsae]
 gi|187022469|emb|CAP38284.1| CBR-RPS-18 protein [Caenorhabditis briggsae AF16]
          Length = 154

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  I   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPFALTAIKGVGRRFAFVCCRKADIDVNKRAGELTEEDFDKIVTIMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   +   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|260895671|ref|ZP_05904167.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466]
 gi|308089500|gb|EFO39195.1| ribosomal protein S13p/S18e [Vibrio parahaemolyticus Peru-466]
          Length = 90

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 32  DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLR 91
            I  ++ I  + ++ +L E ++ Q+R  + + Y VEGDLRR V+MNIKRLMDLGCYRGLR
Sbjct: 4   AILAEVGIAEDVKISELTEEQIDQLRDGVAK-YTVEGDLRREVSMNIKRLMDLGCYRGLR 62

Query: 92  HRRGLPVRGQRTHTNARTRKKFGKGG 117
           HRR LP+RGQRT TNARTRK   K  
Sbjct: 63  HRRSLPLRGQRTKTNARTRKGPRKPI 88


>gi|71005082|ref|XP_757207.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
 gi|46096569|gb|EAK81802.1| hypothetical protein UM01060.1 [Ustilago maydis 521]
          Length = 154

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 26/144 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V  AL  I G+G + +  +C K  I   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVDGKIKVQYALTQIKGVGRRYANIVCKKADIDLSKRAGELNSDELERIVTIL 74

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                          +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 75  QNPAEFKIPSWFLNRQRDIVDGKSSQLLSNNIDSKLRDDLERLKKIKAHRGIRHYLGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +        +K+
Sbjct: 135 RGQHTKTTGRRGRTV----ANKKK 154


>gi|328860508|gb|EGG09614.1| hypothetical protein MELLADRAFT_31252 [Melampsora larici-populina
           98AG31]
          Length = 122

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 4/117 (3%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVH-QLVES---EVIQIRQ 58
            + GVN+P  K V  AL    GIG  +++ ICN+L   P+  V  +L +    + + +  
Sbjct: 3   FVLGVNLPERKLVQFALLQYVGIGHYTAKLICNRLQFHPKLTVDFKLSDPPKPKTLSLEA 62

Query: 59  AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
              Q   +E DLRR V  NI     +G YRG RH  G PV GQRTHTNA+T KK  +
Sbjct: 63  DPLQRLIIESDLRREVRANIAHHRAVGSYRGKRHALGFPVNGQRTHTNAKTAKKLNR 119


>gi|319738236|emb|CBJ18012.1| ribosomal protein S13 [Ectocarpus siliculosus]
          Length = 119

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V++L +I+G+G   S+++C K     + R   +   +   +    
Sbjct: 1   MPYIIGTSIPEDKVLVQSLSHIYGLGSSQSKNLCKKAGFGSDSRGSDITFLKGKILENFA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRGLRH++GLPVRGQRTHTNA+ R
Sbjct: 61  EATSLPLGSDLRRFQNNKIRRLCSISTYRGLRHKKGLPVRGQRTHTNAKKR 111


>gi|62989803|emb|CAD91294.1| mitochondrial ribosomal protein RPS13 [Orchis italica]
          Length = 116

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/112 (36%), Positives = 67/112 (59%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+  +G       +V  A   + GIG K +  + ++L I    ++++L +S++ Q+ Q I
Sbjct: 1   MSYNSGARSVPDSQVRIASTKMDGIGHKKAIQVRSRLGISGNIKMNELTKSQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHTNA T +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISLSRYRGIRHQDGSPLRGQRTHTNAGTCRK 112


>gi|308450179|ref|XP_003088206.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
 gi|308461679|ref|XP_003093129.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
 gi|308248781|gb|EFO92733.1| hypothetical protein CRE_02774 [Caenorhabditis remanei]
 gi|308250761|gb|EFO94713.1| hypothetical protein CRE_12287 [Caenorhabditis remanei]
          Length = 154

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   NI   ++V  AL  I G+G + +   C K  +   +R  +L E +  +I   ++ 
Sbjct: 14  RVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELSEEDFDKIVTIMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   +   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  +     GV++K+
Sbjct: 134 QHTKTTGRKGRTV---GVSKKK 152


>gi|256273632|gb|EEU08559.1| Rps18ap [Saccharomyces cerevisiae JAY291]
          Length = 147

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            +   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++ 
Sbjct: 17  YLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 76

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +  ++   +  +++RL  +  +RG+RH  GL VRG
Sbjct: 77  PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 136

Query: 101 QRTHTNARTR 110
           Q T T  R R
Sbjct: 137 QHTKTTGRRR 146


>gi|300711114|ref|YP_003736928.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
 gi|299124797|gb|ADJ15136.1| 30S ribosomal protein S13P [Halalkalicoccus jeotgali B3]
          Length = 168

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 20/134 (14%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ I     I       +L + E+  I + +
Sbjct: 20  FVRIGQTDLDGTKTVERSLSEMNGIGRRAARIIAQNAGISRTATFGRLEDDEIDAIVEEV 79

Query: 61  EQ--------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           E                      ++   DL  T   +I RL  +  YRG+RH+RG  VRG
Sbjct: 80  EGFAENNPEWLANHQGYYDGEITHETGNDLELTRRQDINRLQMISAYRGVRHQRGQKVRG 139

Query: 101 QRTHTNARTRKKFG 114
           QRT +  R+    G
Sbjct: 140 QRTRSTGRSEGTIG 153


>gi|302348809|ref|YP_003816447.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
 gi|302329221|gb|ADL19416.1| 30S ribosomal protein S13P [Acidilobus saccharovorans 345-15]
          Length = 173

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 22/140 (15%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            RIA  +IP    V+  L  I GIG+ ++  I  KL I P  R+  L    + ++  A+ 
Sbjct: 13  VRIANTDIPGEDTVIYGLSRIKGIGYATALAIARKLGIDPTARIGYLQPDVIKRLEDAVN 72

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                +  + V  +L      +I R + +G +RG+RH+ G  VR
Sbjct: 73  DLTRLSLPSWLYNRRKDYESGQDKHLVGAELIFVARRDIDREIKIGSWRGVRHKLGYKVR 132

Query: 100 GQRTHTNARTRKKFGKGGVA 119
           GQ+THT  RT    G    A
Sbjct: 133 GQKTHTTGRTGMTVGVKRAA 152


>gi|325967787|ref|YP_004243979.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28]
 gi|323706990|gb|ADY00477.1| 30S ribosomal protein S13P [Vulcanisaeta moutnovskia 768-28]
          Length = 158

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K V  AL  I GIG  ++  IC  L I P  R+ QL +  V ++  A+
Sbjct: 8   IVRIGDTDLDGFKPVAYALTKIRGIGIPTAYAICRYLGINPLIRLGQLDDETVRKLDWAV 67

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              YQ                     +  DL      +I  +  L  ++G+RH  GL VR
Sbjct: 68  RNLYQFAPGWFVNRPKDPETGRNVHLLGADLVLAAKKDIDLMKKLRSWKGIRHNLGLKVR 127

Query: 100 GQRTHTNARTRKKFG 114
           GQRT T  R     G
Sbjct: 128 GQRTRTTGRLGLTVG 142


>gi|21450006|ref|NP_659268.1| ribosomal protein S13 [Laminaria digitata]
 gi|21425331|emb|CAC87964.1| ribosomal protein S13 [Laminaria digitata]
          Length = 119

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+GIG   S+ +C K     + R   +  ++   +    
Sbjct: 1   MPFIIGTSIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFAKGKNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVISTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|299830454|ref|YP_003734825.1| ribosomal protein L13 [Pythium ultimum]
 gi|299830485|ref|YP_003734856.1| ribosomal protein L13 [Pythium ultimum]
 gi|269810831|gb|ACZ43860.1| ribosomal protein L13 [Pythium ultimum]
 gi|269810862|gb|ACZ43891.1| ribosomal protein L13 [Pythium ultimum]
 gi|269812144|gb|ACZ44442.1| ribosomal protein L13 [Pythium ultimum]
 gi|269812175|gb|ACZ44473.1| ribosomal protein L13 [Pythium ultimum]
          Length = 137

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 70/121 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINEYQSKKICKNIGINPQITINKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ ++E  L+++    +  L+D+   RG+R  +GLPVRGQRTHTNA+T KK  K  V +
Sbjct: 61  NKNIKIEQLLKQSKKDRLNELLDIKSNRGIRLSQGLPVRGQRTHTNAKTVKKLKKIFVQK 120

Query: 121 K 121
           +
Sbjct: 121 Q 121


>gi|225714468|gb|ACO13080.1| 40S ribosomal protein S18 [Lepeophtheirus salmonis]
          Length = 152

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + ++ A+  I GIG + +  +  K  I   +R  +L E EV +I   +
Sbjct: 12  ILRVLNTNIDGRRNIMFAMTAIKGIGRRYANIVLKKADIDLYKRAGELSEDEVEKIVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNSLDIKLREDLERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|56791625|gb|AAW30350.1| ribosomal protein S13 [Amborella trichopoda]
          Length = 102

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/98 (37%), Positives = 62/98 (63%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
            ++V  A   I GIG K +  + ++L I    ++++L + ++ ++ Q I QD+ V  + +
Sbjct: 5   NEKVRIASTKIDGIGPKKAIQVRSRLGISGNIKMNELTKYQIDKMEQMIGQDHVVHWEFK 64

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           R    +I+RL+ +  YRG+RH+ G P+RGQRTHTNART
Sbjct: 65  RGERADIERLISISRYRGIRHKDGSPLRGQRTHTNART 102


>gi|156848892|ref|XP_001647327.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118012|gb|EDO19469.1| hypothetical protein Kpol_1002p119 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 121

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + V  AL    +G+G +++Q IC+KL   P  R+HQL E +++ I   +
Sbjct: 3   VHILGKGFKGKEVVRIALASKFYGVGLETAQKICSKLGFYPWMRMHQLTEPQILGITSEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  +EG+ R  V  NI     +G Y+GLRH   LPVRGQ T  NA T ++  +
Sbjct: 63  S-NMTIEGNARAVVKNNIALKRRIGSYQGLRHAMNLPVRGQNTRNNAHTARRLNR 116


>gi|126697458|gb|ABO26686.1| 40S ribosomal protein S18 [Haliotis discus discus]
          Length = 154

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + S  +  K  I   +R  +L + EV ++   +
Sbjct: 14  ILRVMNTNIDGRTKIMFALTAIKGMGRRFSNVVLKKANIDLTKRAGELSDEEVDRVITVM 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 74  TNPRQYKIPDWFLNRQKDVKDGKFNQVLANMLDNKLREDLERLKKIRNHRGLRHYWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 134 RGQHTKTTGRRGRTV---GVAKKK 154


>gi|325092307|gb|EGC45617.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H88]
          Length = 125

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G+N P  + V +AL    GIG  +   +  +  +    ++  L   +V+ +  A+
Sbjct: 1   MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ T +  +T  K  K
Sbjct: 61  SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQNTRSQIKTAIKLNK 114


>gi|188572482|gb|ACD65147.1| putative 40S ribosomal protein RPS18 [Phoronis muelleri]
          Length = 152

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ A+  I GIG + +  +  K  +   +R  +L E EV ++   +
Sbjct: 12  ILRVMNTNIDGKRKIMFAMTAIKGIGRRYAHVVLKKADVDLAKRAGELSEEEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDVKDGKTSQVMSNGLDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|312218573|emb|CBX98518.1| similar to 30S ribosomal protein S13 [Leptosphaeria maculans]
          Length = 125

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +   A  V R+L    GIG K SQ I  K  I P ++V  L  S V+++ + +
Sbjct: 1   MVFINGFSFTEATLVKRSLESFFGIGPKVSQKIMAKFYIHPWQKVGSLKNSTVLELTEEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DLRR V  +I+RL D+G YRG RH  GLPVRGQRT T   T ++  +
Sbjct: 61  T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQRTRTQITTARRLNR 114


>gi|146422129|ref|XP_001487006.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
 gi|146388127|gb|EDK36285.1| 40S ribosomal protein S18 [Meyerozyma guilliermondii ATCC 6260]
          Length = 145

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ AL  I G+G + S  +C K  +  ++R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 74  QNPTNYKIPAWFLNRQKDQVDGKDYHVLANNMESKLRDDLERLKKIRAHRGIRHFWGLKV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T T +R R
Sbjct: 134 RGQHTKTTSRGR 145


>gi|307195851|gb|EFN77647.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|307195853|gb|EFN77649.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|307195858|gb|EFN77654.1| 40S ribosomal protein S18 [Harpegnathos saltator]
 gi|332020747|gb|EGI61151.1| 40S ribosomal protein S18 [Acromyrmex echinatior]
          Length = 137

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 25/140 (17%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
            G NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I   +    
Sbjct: 1   MGTNIDGNRKVMFAMTAIKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPR 60

Query: 65  Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           Q                         +L   +  +++R+  +  +RGLRH  GL VRGQ 
Sbjct: 61  QYKIPDWFLNRQKDIVDGKYSQLTSANLDSKLREDLERMKKIRAHRGLRHYWGLRVRGQH 120

Query: 103 THTNARTRKKFGKGGVARKR 122
           T T  R  +     GV++K+
Sbjct: 121 TKTTGRRGRTV---GVSKKK 137


>gi|254569222|ref|XP_002491721.1| Protein component of the small (40S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|238031518|emb|CAY69441.1| Protein component of the small (40S) ribosomal subunit [Pichia
           pastoris GS115]
 gi|328351775|emb|CCA38174.1| 40S ribosomal protein S18 [Pichia pastoris CBS 7435]
          Length = 153

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ AL  I G+G + S  +C K  +   +R  +L + E+ ++   +
Sbjct: 17  ILRLLNTNVDGRIKIMYALTTIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIM 76

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   L      +I+RL  +  +RG+RH  GL V
Sbjct: 77  QNPTQYKIPAWFLNRQRDTVDGKDYHTLANSLESKYRDDIERLKKIRAHRGIRHAWGLKV 136

Query: 99  RGQRTHTNAR 108
           RGQ T T +R
Sbjct: 137 RGQHTKTTSR 146


>gi|110671476|gb|ABG81989.1| putative ribosomal protein S18 [Diaphorina citri]
          Length = 153

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 26/145 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ AL  I G G + S  +  K  I   +R  +  E EV +I   +
Sbjct: 12  ILRVMSTNIDGKRKVMFALTAIKGCGRRFSNIVLKKADIDLNKRAGECSEEEVDKIITIM 71

Query: 61  EQDYQ--------------VEGD---------LRRTVAMNIKRLMDLGCYRGLRHRRGLP 97
               Q              V+G          L   +  +++RL  +  +RG+RH  GL 
Sbjct: 72  TNPRQYKIPDWFLNRQKDIVDGKYSQLTSTAQLDSKLREDLERLKKIRAHRGMRHYWGLR 131

Query: 98  VRGQRTHTNARTRKKFGKGGVARKR 122
           VRGQ T T  R  +     GV++K+
Sbjct: 132 VRGQHTKTTGRRGRTV---GVSKKK 153


>gi|294495901|ref|YP_003542394.1| 30S ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
 gi|292666900|gb|ADE36749.1| SSU ribosomal protein S13P [Methanohalophilus mahii DSM 5219]
          Length = 148

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 21/134 (15%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            RI   ++   ++V+ AL  I GIG ++++ I     + P   +  L +  + ++ +AI 
Sbjct: 10  VRIMNTDLQGKQKVLYALTGIKGIGRRTARLIAESAEVDPSETIGYLSDEGIARLNEAIE 69

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  + +  D+  T+  ++  L  +  YRG+RH RGL VRG
Sbjct: 70  TFENHLPVWMLNRQKDLLTGENKHILGQDIDLTIREDLNDLKKIRAYRGIRHERGLKVRG 129

Query: 101 QRTHTNARTRKKFG 114
           QRT +  R     G
Sbjct: 130 QRTKSAGRGGSTIG 143


>gi|156086130|ref|XP_001610474.1| 40S ribosomal protein S18 [Babesia bovis T2Bo]
 gi|154797727|gb|EDO06906.1| 40S ribosomal protein S18, putative [Babesia bovis]
          Length = 154

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V  AL  I GIG + +  +C    I   +R  +L   E+ ++   I
Sbjct: 14  ILRILNTNVDGRQKVTVALTAIRGIGRRMATVVCKVAGIDVTKRAGELTTDEINKVVTII 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     L   +  +++R+  +  +RGLRH  GL  
Sbjct: 74  SSPADVMIPAWFLNRQKDYKEGKNLHNTANMLDTCLRDDLERMKKMRLHRGLRHYWGLRT 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T +  R  K     GV +K+
Sbjct: 134 RGQHTKSTGRHGKTV---GVVKKK 154


>gi|85091144|ref|XP_958758.1| hypothetical protein NCU09539 [Neurospora crassa OR74A]
 gi|28920142|gb|EAA29522.1| hypothetical protein NCU09539 [Neurospora crassa OR74A]
 gi|38566865|emb|CAE76171.1| probable ribosomal protein S13 [Neurospora crassa]
          Length = 119

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   +G+G ++S  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVFILGVNFNEHKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR V  NIKRL D+G YRG RH  GLPVRGQ+T       +K  K
Sbjct: 61  ST-MTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114


>gi|302690598|ref|XP_003034978.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8]
 gi|300108674|gb|EFJ00076.1| hypothetical protein SCHCODRAFT_14112 [Schizophyllum commune H4-8]
          Length = 171

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 61/167 (36%), Gaps = 52/167 (31%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + G+ +        AL  I+G+G K++  IC +L I    RV  L   ++ Q+   +
Sbjct: 1   MVHVLGIPLNDHHFARFALTNIYGVGRKTAHRICARLQIHDRCRVKNLTPLQITQLASFL 60

Query: 61  EQ----------------------------------------------------DYQVEG 68
                                                                 + ++E 
Sbjct: 61  SSPQTSPPAPKLPLADPFYKAPPPETNMAEAEAKLRRRQQVRQLQGARQKDPLYNLRIES 120

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +LRR +  NI     +G Y GLRH   LPVRGQ T +NA+T KK  +
Sbjct: 121 ELRREIRENIAHQRMIGSYVGLRHAMHLPVRGQNTQSNAKTAKKLNQ 167


>gi|125546023|gb|EAY92162.1| hypothetical protein OsI_13875 [Oryza sativa Indica Group]
 gi|125588230|gb|EAZ28894.1| hypothetical protein OsJ_12934 [Oryza sativa Japonica Group]
          Length = 170

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 43/162 (26%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR---------------- 44
           + R+   N+   ++++ AL  I G+G + S   C K  I   +R                
Sbjct: 12  ILRLLNTNVDGKQKIMFALTSIKGVGRRFSNIACKKADIDMNKRQEPPPPPSRRQISVMV 71

Query: 45  --VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKR 80
               +L   E+ ++   +    Q                      V   L   +  +++R
Sbjct: 72  GGAGELTPEELERLMTVVANPRQFKVPDWFLNRKKDYKDGRFSQVVSNALDMKLRDDLER 131

Query: 81  LMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L  +  +RGLRH  GL VRGQ T T  R  K     GV++KR
Sbjct: 132 LKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 170


>gi|11499866|ref|NP_071110.1| 30S ribosomal protein S13P [Archaeoglobus fulgidus DSM 4304]
 gi|6226060|sp|O27999|RS13_ARCFU RecName: Full=30S ribosomal protein S13P
 gi|2648238|gb|AAB88972.1| SSU ribosomal protein S13P (rps13P) [Archaeoglobus fulgidus DSM
           4304]
          Length = 146

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 23/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   K ++ AL  I GIG ++++ I N+L +    ++ +L +  + ++++ +
Sbjct: 6   IVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVKKFV 65

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E++                     + +  D+     ++I+RL+ +  YRG+RH RG  VR
Sbjct: 66  EEEIESLPSWLLNRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVR 125

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R  +  G   V RKR
Sbjct: 126 GQRTRSTGRKGRTVG--VVRRKR 146


>gi|255718259|ref|XP_002555410.1| KLTH0G08646p [Lachancea thermotolerans]
 gi|238936794|emb|CAR24973.1| KLTH0G08646p [Lachancea thermotolerans]
          Length = 149

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + +  AL    +GIG K+S+ +C KL   P  R+HQL E +++ I   +
Sbjct: 3   VHILGKGFKGKEVIKIALASKFYGIGLKTSETLCAKLGFYPWMRMHQLSEPQIMSITSEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +EG+ R  V  NI     +G Y+G+RH   LPVRGQ T  NA+T ++  +
Sbjct: 63  ST-MTIEGNARAVVKENIALKRRIGSYQGMRHALNLPVRGQHTRNNAKTARRLNR 116


>gi|229367816|gb|ACQ58888.1| 40S ribosomal protein S18 [Anoplopoma fimbria]
          Length = 152

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|320581243|gb|EFW95464.1| ribosomal protein S18B [Pichia angusta DL-1]
          Length = 150

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 22/133 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I G+G + +  +C K  +   +R  +L + E+ +I   +
Sbjct: 14  ILRLLNTNVDGRIKVMYALTTIRGVGRRYANLVCKKADVDLSKRAGELTQEELERIVTIM 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +  +L   +  +++RL  +  +RGLRH   L V
Sbjct: 74  QNPTQYKIPAWFLNRQADVVDGKDYHVLANNLESKLREDLERLKRMRAHRGLRHSWRLRV 133

Query: 99  RGQRTHTNARTRK 111
           RGQ T T  R  K
Sbjct: 134 RGQHTKTTGRRGK 146


>gi|312380810|gb|EFR26705.1| hypothetical protein AND_25954 [Anopheles darlingi]
          Length = 146

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + V  AL  I G+G + +  +  K  + P +R  +  + EV +I   +
Sbjct: 6   ILRVLSTNIDGKRTVPIALTAIKGVGRRYAHVVLKKADVDPFKRAGECSDEEVEKIITIV 65

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                         ++   +  +++RL  +  +RG+RH  GL V
Sbjct: 66  SNPRHYKIPDWFLNRQKDIVDGKYMQLTSSNIDSKLREDLERLKRIHAHRGMRHHWGLRV 125

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 126 RGQHTKTTGRRGRTV---GVSKKK 146


>gi|225710398|gb|ACO11045.1| 40S ribosomal protein S18 [Caligus rogercresseyi]
          Length = 152

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + ++ A+  I GIG + +  +  K  I   +R  +L E EV +I   +
Sbjct: 12  ILRVMNTNIDGMRNIMFAMTAIKGIGRRYANLVLKKADIDLHKRAGELSEDEVEKIITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKEGKTSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|41018060|sp|Q8IT98|RS18_AEQIR RecName: Full=40S ribosomal protein S18
 gi|22758908|gb|AAN05613.1| ribosomal protein S18 [Argopecten irradians]
          Length = 152

 Score =  114 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ A+  I G+G + +  +C K  +   +R  +L E E+ ++   +
Sbjct: 12  ILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  SNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GVA+K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVAKKK 152


>gi|254580623|ref|XP_002496297.1| ZYRO0C15158p [Zygosaccharomyces rouxii]
 gi|238939188|emb|CAR27364.1| ZYRO0C15158p [Zygosaccharomyces rouxii]
          Length = 121

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G      + +   L    +GIG  +++ +C+KL   P  R+HQL ES+++ I   +
Sbjct: 3   VHILGKAFKGKEVIRIGLSSKFYGIGEGTAEKVCSKLGFYPWMRMHQLSESQIMNIASEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  +EGD R  V  NI     +G Y+G+RH   LPVRGQ T  NA T +K  K
Sbjct: 63  S-NMTIEGDARAVVKENIALKKRIGSYQGMRHTLNLPVRGQHTRNNANTARKLNK 116


>gi|118372788|ref|XP_001019588.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
           thermophila]
 gi|319443368|pdb|2XZM|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 1
 gi|319443403|pdb|2XZN|M Chain M, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
           In Complex With Initiation Factor 1. This File Contains
           The 40s Subunit And Initiation Factor For Molecule 2
 gi|89301355|gb|EAR99343.1| ribosomal protein S13p/S18e containing protein [Tetrahymena
           thermophila SB210]
 gi|315570327|tpg|DAA33982.1| TPA_exp: 40S ribosomal protein rpS18e [Tetrahymena thermophila]
          Length = 155

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 58/142 (40%), Gaps = 24/142 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           RI   NI   +    AL  I GIG + +  IC  L I P  R   L E +  +I   I  
Sbjct: 16  RILNTNIDGKRITPIALTGIRGIGRRFAYIICKVLKIDPNARAGLLTEDQCNKITDLIAD 75

Query: 61  -------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               ++YQ+    L   +  +++RL  +  +RGLRH  GL VRG
Sbjct: 76  PEAHGIPTWLLNRINDFKDGKNYQMASNTLDTKMREDLERLKKIKSHRGLRHFWGLKVRG 135

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T+ R       G V + +
Sbjct: 136 QHTKTSGRH--GVVCGVVRKNK 155


>gi|145932453|ref|YP_001165365.1| ribosomal protein S13 [Phytophthora ramorum]
 gi|110169651|gb|ABG54116.1| ribosomal protein S13 [Phytophthora ramorum]
 gi|188038014|gb|ACD46632.1| ribosomal protein S13 [Phytophthora ramorum]
          Length = 138

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 69/121 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S  IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTILYGINEYQSNKICKNIGINPQITLNKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            ++ +VE  L+++    I  L+++   RG+R  +GLPVRGQRTHTNA+T KK  +  + +
Sbjct: 61  NKNLKVEQLLKKSKTERITELVEIKSNRGIRQSQGLPVRGQRTHTNAKTSKKLKQIFIKK 120

Query: 121 K 121
           +
Sbjct: 121 R 121


>gi|281211011|gb|EFA85177.1| 40S ribosomal protein S18 [Polysphondylium pallidum PN500]
          Length = 154

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++++ AL  + GIG + +  +C K  +  ++R  +L + EV ++   +
Sbjct: 12  IIRIYNTNVDGRRKIMYALTNVKGIGRRFANLVCKKADVDLQKRAGELSKDEVERLTTIL 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L      +++RL  +  +RG+RH  GL V
Sbjct: 72  NHPRQYNIPAWFLNRQKDIKDGKYSQALANQLDVKYREDLERLKKIRAHRGIRHHMGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T T  R  +     GV++K+
Sbjct: 132 RGQKTKTTGRRGRTV---GVSKKK 152


>gi|110668837|ref|YP_658648.1| 30S ribosomal protein S13P [Haloquadratum walsbyi DSM 16790]
 gi|121684701|sp|Q18G53|RS13_HALWD RecName: Full=30S ribosomal protein S13P
 gi|109626584|emb|CAJ53048.1| ribosomal protein S13 [Haloquadratum walsbyi DSM 16790]
          Length = 173

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  + GIG ++++ I +  ++        L E E+  I  A+
Sbjct: 21  FVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAV 80

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                      D++   DL      ++ R+  +  Y+G+RH+RG  VR
Sbjct: 81  ENLDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVR 140

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 141 GQRTKSTGRTEGTIG 155


>gi|62989761|emb|CAD91273.1| mitochondrial ribosomal protein RPS13 [Diuris sulphurea]
          Length = 116

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 65/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G       +V  A   + GI  K +  +  +L I    ++ +L + ++ Q+ Q I
Sbjct: 1   MSYISGARSFPDSQVRIASTKMEGIAPKKAIQVRYRLGIRGNIKMTELTKYQIDQMEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + +  YRG+RH+ G P+RGQRTHTNART +K
Sbjct: 61  SQDHVVHWELKRGERADIERFISISRYRGIRHQDGSPLRGQRTHTNARTCRK 112


>gi|302915869|ref|XP_003051745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732684|gb|EEU46032.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 131

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ AL  I G+G + S  +C K  +   +R  +L   E+ +I   I
Sbjct: 1   ILRLLNTNVDGKQKVMYALTKIKGVGRRYSNLVCKKADVDLNKRAGELTSEELERIVTII 60

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +   +   +  +++RL  +  +RGLRH  GL V
Sbjct: 61  QNPTQYKIPTWFLNRQRDIVDGKDSHILANGVDSKLREDLERLKKIRAHRGLRHYWGLRV 120

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 121 RGQHTKTTGR 130


>gi|49258832|pdb|1S1H|M Chain M, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
           Yeast Obtained By Docking Atomic Models For Rna And
           Protein Components Into A 11.7 A Cryo-Em Map. This File,
           1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
           In File 1s1i
          Length = 132

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++ 
Sbjct: 2   RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 61

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +  ++   +  +++RL  +  +RG+RH  GL VRG
Sbjct: 62  PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 121

Query: 101 QRTHTNARTR 110
           Q T T  R R
Sbjct: 122 QHTKTTGRRR 131


>gi|28626512|ref|NP_775341.1| 40S ribosomal protein S18 [Danio rerio]
 gi|41018061|sp|Q8JGS9|RS18_DANRE RecName: Full=40S ribosomal protein S18
 gi|20977555|gb|AAM28205.1| 40S ribosomal protein S18 [Danio rerio]
 gi|38566120|gb|AAH62289.1| Ribosomal protein S18 [Danio rerio]
 gi|126632524|emb|CAM56557.1| ribosomal protein S18 [Danio rerio]
          Length = 152

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|313229085|emb|CBY18237.1| unnamed protein product [Oikopleura dioica]
          Length = 152

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + +  A+  I GIG + +  IC K  I   +R  QL E E+ ++   +
Sbjct: 12  ILRVQNTNIDGQRNITFAMTAIKGIGRRFANIICKKADINISQRAGQLDEEEIKRMETIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++R+  + C+RGLRH   L V
Sbjct: 72  LNPRQYKVPDYFLNRQKDAKDGTFTQVISNGLETKLREDLERMKKIRCHRGLRHYWMLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|167044121|gb|ABZ08804.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
           HF4000_APKG5C13]
          Length = 208

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI G +IP  ++++  L  I G+G+  +  I N L I P +R+  L   +V  I   I+
Sbjct: 9   VRIVGNDIPGERKMIVGLTQIRGVGYMFANTILNLLKINPNQRIGYLSLEQVKSIESIIK 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + +  D+  TV  +I+R    G +RG+RH  GL VR
Sbjct: 69  NPSASNFPSWFLNRRKDVETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVR 128

Query: 100 GQRTHTNAR 108
           GQRT    R
Sbjct: 129 GQRTRCTGR 137


>gi|60417186|emb|CAH57704.1| 40S ribosomal protein S18 [Platichthys flesus]
 gi|116488056|gb|ABJ98610.1| 40S ribosomal protein S18 [Scophthalmus maximus]
 gi|124300823|dbj|BAF45907.1| ribosomal protein S18 [Solea senegalensis]
          Length = 152

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|116335040|ref|YP_802535.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV]
 gi|123025707|sp|Q05FK2|RS13_CARRP RecName: Full=30S ribosomal protein S13
 gi|116235321|dbj|BAF35169.1| ribosomal protein S13 [Candidatus Carsonella ruddii PV]
          Length = 118

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           I GV I + K +V  L  I+GIG+  S  IC+K+     ++   L   E  +I   I + 
Sbjct: 5   ICGVLISKKKNIVFGLTKIYGIGYSMSLKICSKIENFKNKKFKDLTNEEKAKIENFINK- 63

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGV 118
             VE +L+  +  N K+ ++L  Y+ LRH++ LP RGQRT TNA+TRKK     +
Sbjct: 64  INVENNLKTIIKENFKKKLNLNSYKSLRHKKKLPCRGQRTKTNAKTRKKMNHEII 118


>gi|289615638|emb|CBI57559.1| unnamed protein product [Sordaria macrospora]
          Length = 119

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   +G+G ++S  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVFILGVNFNEQKLVQKALESFYGLGQQASARILAKYSIHPRAKMGTLPPKIVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR V  NIKRL D+G YRG RH  GLPVRGQ+T       +K  K
Sbjct: 61  ST-MTIENDARRLVLDNIKRLRDMGTYRGRRHAMGLPVRGQQTRNQIANARKLNK 114


>gi|189193877|ref|XP_001933277.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978841|gb|EDU45467.1| 30S ribosomal protein S13 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 125

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +   A  V R+L    GIG   SQ I  K  I P  +V  L  S ++ +   +
Sbjct: 1   MVFINGFSFTEATLVKRSLESFFGIGPSVSQRIMAKFYIHPWAKVGSLKNSTLLDLSAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK---GG 117
             + ++E DLRR V  +I+RL D+G YRG RH  GLPVRGQ+T T   T ++  K   GG
Sbjct: 61  T-NMKIENDLRRQVQDDIRRLRDMGTYRGRRHAMGLPVRGQKTRTQITTARRLNKVERGG 119

Query: 118 VAR 120
             R
Sbjct: 120 TGR 122


>gi|134062|sp|P15758|RT13_OENBE RecName: Full=Ribosomal protein S13, mitochondrial
 gi|70973|pir||R3OB3M ribosomal protein S13 - evening primrose mitochondrion
          Length = 114

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 3/116 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G  +   ++V  A   + GIG K +  + ++L      +  +L + ++ QI Q  
Sbjct: 1   MSYISGARLVADEQVRIASTKMDGIGPKKAIQVRSRLG--GNIKRKELTKYQIDQIEQMR 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+R + + CYRG+RH+ GLP+RGQR+HTNART RK+  K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRKRIRK 114


>gi|148362150|gb|ABQ59673.1| ribosomal protein S18 [Salmo salar]
 gi|197631783|gb|ACH70615.1| ribosomal protein S18 [Salmo salar]
 gi|209732176|gb|ACI66957.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209733230|gb|ACI67484.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209736928|gb|ACI69333.1| 40S ribosomal protein S18 [Salmo salar]
 gi|209738224|gb|ACI69981.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223646140|gb|ACN09828.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223646324|gb|ACN09920.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223671987|gb|ACN12175.1| 40S ribosomal protein S18 [Salmo salar]
 gi|223672171|gb|ACN12267.1| 40S ribosomal protein S18 [Salmo salar]
 gi|225703166|gb|ACO07429.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225703728|gb|ACO07710.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225705884|gb|ACO08788.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
 gi|225716168|gb|ACO13930.1| 40S ribosomal protein S18 [Esox lucius]
 gi|260182164|gb|ACX35593.1| ribosomal protein S18 [Salmo salar]
 gi|260182178|gb|ACX35606.1| ribosomal protein S18 [Salmo salar]
 gi|307147577|gb|ADN37677.1| ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|229315919|ref|YP_002860145.1| ribosomal protein S13 [Micromonas sp. RCC299]
 gi|226431204|gb|ACO55609.1| ribosomal protein S13 [Micromonas sp. RCC299]
          Length = 120

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 62/117 (52%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M      N+    +V  AL  I+GIG  ++  +C++L +     V  L  +++ Q+ + I
Sbjct: 1   MVFFMQQNLRPNIKVRNALTQIYGIGSFTANQVCDQLGLRSSLLVKHLNGAQLDQLARVI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            + +    +L R +  +I R + +  Y+G R  +GLPVRGQRTHTNAR  +K  K  
Sbjct: 61  NRFHVTGQELERVIQQDISRFVRISIYKGFRFTQGLPVRGQRTHTNARNTRKKKKPI 117


>gi|322369537|ref|ZP_08044102.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
 gi|320551269|gb|EFW92918.1| 30S ribosomal protein S13P [Haladaptatus paucihalophilus DX253]
          Length = 168

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++GIG ++++ +  +  +  +    +L + ++ ++ +A+
Sbjct: 16  FVRIGQTDLDGTKTVERSLSEMNGIGRRTARIVAEEADVDRKATFGRLDDDDIERVVEAV 75

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       ++   DL  +   ++ R+  +  Y+G+RH+RG  VR
Sbjct: 76  ENYADEVPAWLTNHRKEYFSGETTHETGNDLSMSRRRDLNRMQMIDSYKGVRHKRGQKVR 135

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 136 GQRTKSTGRTEGTIG 150


>gi|318190651|ref|NP_001187081.1| 40S ribosomal protein S18 [Ictalurus punctatus]
 gi|41018101|sp|Q90YQ5|RS18_ICTPU RecName: Full=40S ribosomal protein S18
 gi|15294049|gb|AAK95201.1|AF402827_1 40S ribosomal protein S18 [Ictalurus punctatus]
          Length = 152

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|281500818|pdb|3JYV|M Chain M, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
           EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
           Lanuginosus Ribosome At 8.9a Resolution
          Length = 130

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 22/130 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+    ++V AL  I G+G + S  +C K  +   +R  +L + E+ +I Q ++ 
Sbjct: 1   RLLNTNVDGNIKIVYALTTIKGVGRRYSNLVCKKADVDLHKRAGELTQEELERIVQIMQN 60

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +  ++   +  +++RL  +  +RG+RH  GL VRG
Sbjct: 61  PTHYKIPAWFLNRQNDITDGKDYHTLANNVESKLRDDLERLKKIRAHRGIRHFWGLRVRG 120

Query: 101 QRTHTNARTR 110
           Q T T  R R
Sbjct: 121 QHTKTTGRRR 130


>gi|45191023|ref|NP_985277.1| AER422Cp [Ashbya gossypii ATCC 10895]
 gi|44984091|gb|AAS53101.1| AER422Cp [Ashbya gossypii ATCC 10895]
          Length = 144

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             + G      + V   L    +GIG K+S+ +C KL + P  R+  L E +++ +   +
Sbjct: 3   VHVLGKAFKGKEVVRIGLASKFYGIGLKTSERLCAKLGLYPWMRMQSLTEPQIMAMSTEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +   +E D R  V  NI     +G Y GLRH  GLPV GQRT TNA+T +K  +
Sbjct: 63  SK-MTIEDDARAIVKENIALKRRIGSYAGLRHAMGLPVNGQRTRTNAKTARKLNR 116


>gi|84508609|ref|YP_448656.1| ribosomal protein S13 [Desmarestia viridis]
 gi|45925641|gb|AAS79042.1| ribosomal protein S13 [Desmarestia viridis]
          Length = 119

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+GIG   S+ +C K     + R   +  S+   +    
Sbjct: 1   MPFIIGTSIPEDKVLVQSVAHIYGIGLSQSKILCKKAGFGSDSRGRNVTFSKGKNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRG RHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EAIPLPLGPDLRRFQNDKIRRLCLISTYRGSRHRKGLPVRGQRTHTNAKKR 111


>gi|288560162|ref|YP_003423648.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1]
 gi|288542872|gb|ADC46756.1| ribosomal protein S13P Rps13p [Methanobrevibacter ruminantium M1]
          Length = 149

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 22/135 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+  ++   K + +AL  I G+G   S+ IC  L +    ++  + E +V +I   +E
Sbjct: 9   VRISRKDVDGNKTIEQALTQIKGVGLSLSRSICLTLGLNTTDKIGYISEDDVTKIEDLLE 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + +E DL  T+  ++ R+     Y+G RH  GLPVR
Sbjct: 69  NPQNYSIPDWMLNRRKDYATGDDLHLIESDLDMTLRDDLNRMKKTRSYKGRRHEVGLPVR 128

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R     G
Sbjct: 129 GQRTKSTFRHSSTVG 143


>gi|257053588|ref|YP_003131421.1| 30S ribosomal protein S13P [Halorhabdus utahensis DSM 12940]
 gi|256692351|gb|ACV12688.1| ribosomal protein S13 [Halorhabdus utahensis DSM 12940]
          Length = 176

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  ++GIG ++++ I N + I       +L + ++  I   +
Sbjct: 20  FVRIGQTDLDGTKSVERALTDMNGIGQRAARIIANDVDIDRRETFGRLEDDQIEAIVDRV 79

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       +++  DL  T   +I R+  +  Y+G+RH+RG  VR
Sbjct: 80  EGFADDVPEWLANHRNDFFDGETTHEIGTDLSLTRRQDINRMKMINAYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 140 GQRTKSTGRTEGTIG 154


>gi|147905776|ref|NP_001084747.1| ribosomal protein S18 [Xenopus laevis]
 gi|46329492|gb|AAH68873.1| MGC82306 protein [Xenopus laevis]
          Length = 152

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|12232348|gb|AAG47944.1| ribosomal protein S18 [Cherax destructor]
          Length = 142

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++V+ A+  I G+G + S  +  K  I   +R  ++ E EV +I   +
Sbjct: 2   ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQSKRAGEMTEEEVEKIVTIM 61

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +  +L   +  +++R+  +  +RGLRH  GL V
Sbjct: 62  SNPRQYKIPDWFLNRQKDIKDGKYSQVMSNNLETKLREDLERMKKIRAHRGLRHFWGLRV 121

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 122 RGQHTKTTGRRGRTV---GVSKKK 142


>gi|145592095|ref|YP_001154097.1| 30S ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514]
 gi|158706267|sp|A4WM28|RS13_PYRAR RecName: Full=30S ribosomal protein S13P
 gi|145283863|gb|ABP51445.1| SSU ribosomal protein S13P [Pyrobaculum arsenaticum DSM 13514]
          Length = 152

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++   K+V  AL  I GIG  S+  IC KL I P   +  L E ++ ++  A+
Sbjct: 8   IVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAV 67

Query: 61  EQDYQV---------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++V                       +L      ++  +  L  ++G+RH  GL VR
Sbjct: 68  RNLHEVAPAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVR 127

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GV +K+
Sbjct: 128 GQRTVTTGRLG---AVAGVTKKK 147


>gi|297601533|ref|NP_001051020.2| Os03g0704000 [Oryza sativa Japonica Group]
 gi|255674816|dbj|BAF12934.2| Os03g0704000 [Oryza sativa Japonica Group]
          Length = 203

 Score =  113 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 48  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKVTKDLSEEEVITLRKEVTK 106

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYR 88
            Y +EGDL+R   + I+RL ++ CYR
Sbjct: 107 -YMIEGDLKRFNRVAIERLKEIRCYR 131


>gi|62858571|ref|NP_001016358.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
 gi|161611793|gb|AAI55979.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
 gi|166796647|gb|AAI59393.1| ribosomal protein S18 [Xenopus (Silurana) tropicalis]
          Length = 152

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIKAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|84489671|ref|YP_447903.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
 gi|121722917|sp|Q2NFZ3|RS13_METST RecName: Full=30S ribosomal protein S13P
 gi|84372990|gb|ABC57260.1| 30S ribosomal protein S13P [Methanosphaera stadtmanae DSM 3091]
          Length = 153

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI   ++     +  AL  I GIG   +  IC  L +  + ++  + +  V QI   +
Sbjct: 9   MVRITRKDVDGNSTIATALTEIRGIGKAFAIAICKVLDLDQDAQIGYIDDESVKQIEAVL 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                        + +E DL  T+  ++ R+  +  Y+G RH  GLPV
Sbjct: 69  ENPQEFGIPEWFLNRRNDYETGETKHLIESDLNMTLRDDLNRMKMIRSYKGKRHEVGLPV 128

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R     G
Sbjct: 129 RGQRTKSTFRHGSSVG 144


>gi|326625162|gb|EGE31507.1| Ribosomal protein S13 [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 85

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
                I    ++ +L E ++  +R  + + + VEGDLRR ++M+IKRLMDLGCYRGLRHR
Sbjct: 1   MAAAGIAENVKISELSEEQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHR 59

Query: 94  RGLPVRGQRTHTNARTRKKFGKGG 117
           RGLPVRGQRT TNARTRK   K  
Sbjct: 60  RGLPVRGQRTKTNARTRKGPRKPI 83


>gi|302782790|ref|XP_002973168.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
 gi|300158921|gb|EFJ25542.1| hypothetical protein SELMODRAFT_267619 [Selaginella moellendorffii]
          Length = 156

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 29/148 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELENLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGC----YRGLRHRR 94
               Q                      V   L   +  +++RL  +      +RGLRH  
Sbjct: 72  ANPRQFKIPDWFLNRKKDYKDGRYSQVVANALDMKLRDDLERLKKIRQAYSDHRGLRHYW 131

Query: 95  GLPVRGQRTHTNARTRKKFGKGGVARKR 122
           GL VRGQ T T  R  +     GV++KR
Sbjct: 132 GLRVRGQHTKTTERRGRTV---GVSKKR 156


>gi|225703456|gb|ACO07574.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+RK+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSRKK 152


>gi|167378734|ref|XP_001734909.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|167381370|ref|XP_001735684.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|183231655|ref|XP_654098.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|183233172|ref|XP_653090.2| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|165902209|gb|EDR28096.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
 gi|165903334|gb|EDR28910.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
 gi|169801707|gb|EAL47704.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|169802392|gb|EAL48712.2| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 155

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I   +
Sbjct: 13  MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72

Query: 61  EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                      +   +   +  +I+ L  +  +RGLRH  GL V
Sbjct: 73  NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+R +
Sbjct: 133 RGQHTKTTGRRGRTV---GVSRTK 153


>gi|294658981|ref|XP_461313.2| DEHA2F22308p [Debaryomyces hansenii CBS767]
 gi|202953527|emb|CAG89714.2| DEHA2F22308p [Debaryomyces hansenii]
          Length = 165

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI    +++ AL  I G+G + S  +C K  +  ++R  +L + E+ +I   ++  
Sbjct: 37  LLNTNIDGRIKIMYALTKIRGVGRRYSNLVCKKADVDLKKRAGELTQEELERIVTIMQNP 96

Query: 64  ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                 + +  +L   +  +++RL  +  +RG+RH  GL VRGQ
Sbjct: 97  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQ 156

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 157 HTKTTSRGR 165


>gi|327304315|ref|XP_003236849.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892]
 gi|326459847|gb|EGD85300.1| 40S ribosomal protein S13 [Trichophyton rubrum CBS 118892]
          Length = 147

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+
Sbjct: 29  MVFILGTSFPERQLVRKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 88

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 89  S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 142


>gi|327311848|ref|YP_004338745.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20]
 gi|326948327|gb|AEA13433.1| 30S ribosomal protein S13P [Thermoproteus uzoniensis 768-20]
          Length = 156

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++  AK V  AL  I GIG  S+  IC +L + P   +  L E ++ ++  A+
Sbjct: 7   IVRVGDTDLEGAKAVAFALARIKGIGISSAFAICRRLGVDPYAPLGSLSEEQISKLDWAV 66

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              ++                     +  +L      +I  +  L  ++G+RH  GL VR
Sbjct: 67  RNLHEIAPAWFLNRRRDPVSGRDVHLIGSELILAAKSDIDLMKKLRSWKGMRHAAGLKVR 126

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT T  R        GVA+K+
Sbjct: 127 GQRTVTTGRFGPT---AGVAKKK 146


>gi|221122256|ref|XP_002155929.1| PREDICTED: similar to ribosomal protein S18 isoform 1 [Hydra
           magnipapillata]
 gi|221122258|ref|XP_002155978.1| PREDICTED: similar to ribosomal protein S18 isoform 2 [Hydra
           magnipapillata]
          Length = 155

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + S     K  I  ++R  +L + EV ++   +
Sbjct: 12  ILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDYFLNRQKDIKDGKYTQVLANALDNKLREDLERLKKIKAHRGLRHYWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRKGRTV---GVSKKK 152


>gi|291228799|ref|XP_002734364.1| PREDICTED: ribosomal protein S18-like [Saccoglossus kowalevskii]
          Length = 184

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++++ AL  I G+G + S  +C K  +   +R  ++   +V ++   +
Sbjct: 44  ILRVMNTNIDGRRKIMFALTAIKGVGRRYSNVVCKKADVDLTKRAXKISAIQVEKLITIM 103

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +  +L   +  +++R+  +  +RGLRH  GL V
Sbjct: 104 SNPRQYKIPDWFLNRQKDVKDGKYSQVLANNLDNKLREDLERMKKIRAHRGLRHYWGLRV 163

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 164 RGQHTKTTGRRGRTV---GVSKKK 184


>gi|198578|gb|AAA16796.1| ribosomal protein [Mus musculus]
          Length = 152

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLHNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|145512882|ref|XP_001442352.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409705|emb|CAK74955.1| unnamed protein product [Paramecium tetraurelia]
          Length = 150

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 20/139 (14%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  ----------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
                            ++YQV   +L   +  +++R+  + C RGLRH  GL VRGQ T
Sbjct: 74  KSPRSLQHFQDEISRDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRVRGQHT 133

Query: 104 HTNARTRKKFGKGGVARKR 122
            T  R  +     GV RK+
Sbjct: 134 KTTGRGGQTL---GVERKK 149


>gi|291334094|gb|ADD93766.1| putative ribosomal protein S13/S18 [uncultured marine bacterium
           MedDCM-OCT-S05-C222]
          Length = 155

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  ++   K +  AL  + G+G +++  IC      P      L   +   +R+AI
Sbjct: 16  ILRMADTDMDGLKTLATALTAVKGVGPRTAIQICKNTGFDPASLAGHLSAEQQETLREAI 75

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                     + +     +  T   +I RL  + CYRG+RH  G  VR
Sbjct: 76  EGYAETVPLWMLNRQRDLETGDELHLTGQQVSLTFEDDINRLRTMKCYRGVRHASGNKVR 135

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQR  +N R        GV+RK+
Sbjct: 136 GQRGRSNGRGGLTL---GVSRKK 155


>gi|225704576|gb|ACO08134.1| 40S ribosomal protein S18 [Oncorhynchus mykiss]
          Length = 152

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKRIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|124486067|ref|YP_001030683.1| 30S ribosomal protein S13P [Methanocorpusculum labreanum Z]
 gi|158706246|sp|A2SSW0|RS13_METLZ RecName: Full=30S ribosomal protein S13P
 gi|124363608|gb|ABN07416.1| SSU ribosomal protein S13P [Methanocorpusculum labreanum Z]
          Length = 150

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   + V  AL  I GIG  ++  I  +  +     +  L + +V  I + +
Sbjct: 10  FVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQV 69

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  +    DL      +I  +  + CYRG+RH  GL VR
Sbjct: 70  KAYPASVPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVR 129

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT    R  K     GV+++R
Sbjct: 130 GQRTKATGRFGKIV---GVSKRR 149


>gi|222480228|ref|YP_002566465.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453130|gb|ACM57395.1| ribosomal protein S13 [Halorubrum lacusprofundi ATCC 49239]
          Length = 174

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI G ++   K V R+L  + GIG ++++ +  K  +        L E ++  +    
Sbjct: 20  FVRIGGADLDGTKTVERSLSELDGIGTRTARLVAEKADVDRNATFGLLDEDDLDAVVDIA 79

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       + V  D+      +I R+  +  Y+G+RH+RG  VR
Sbjct: 80  ENLEDHVPSWMTNRQNDFYSGETTHLVGTDVSEKRRHDINRMKIIESYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R+    G
Sbjct: 140 GQRTKSTGRSEGTIG 154


>gi|294872965|ref|XP_002766467.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294881108|ref|XP_002769248.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294951469|ref|XP_002786996.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|294956183|ref|XP_002788842.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239867347|gb|EEQ99184.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239872526|gb|EER01966.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239901586|gb|EER18792.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
 gi|239904454|gb|EER20638.1| 40S ribosomal protein S18, putative [Perkinsus marinus ATCC 50983]
          Length = 149

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 22/128 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   N+    +V  AL  I GIG + +  IC K  +   +R  +L + E+ +I Q I  
Sbjct: 15  RICNTNVDGRVKVAYALTAIKGIGRRFATLICKKCEVDTNKRAGELTQEEIQKIVQVISN 74

Query: 63  DYQV----------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                          L  +   +++R+  +  +RGLRH  G+ VRG
Sbjct: 75  PQQFRIPQWFLNRQHDPVDGTYSQKYSNLLDASKREDLERMKKMRLHRGLRHYWGIRVRG 134

Query: 101 QRTHTNAR 108
           Q T T+ R
Sbjct: 135 QHTKTSGR 142


>gi|88604135|ref|YP_504313.1| 30S ribosomal protein S13P [Methanospirillum hungatei JF-1]
 gi|121721492|sp|Q2FT96|RS13_METHJ RecName: Full=30S ribosomal protein S13P
 gi|88189597|gb|ABD42594.1| SSU ribosomal protein S13P [Methanospirillum hungatei JF-1]
          Length = 151

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V+ +L  I G+G  +++ I     +     + +L E+ V +IR+ +
Sbjct: 11  FVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIREVV 70

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                 + + +  D+  TV  +I  L  +  YRG+RH  G  VR
Sbjct: 71  SNYADRIPVWMSNRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVR 130

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  RT       GV RK+
Sbjct: 131 GQRTKSTGRTGLIV---GVKRKK 150


>gi|76780570|emb|CAD92015.1| mitochondrial ribosomal protein RPS13 [Paris quadrifolia]
          Length = 116

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 61/112 (54%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I+G      ++V  A   I GIG   +  +  +L +    ++++L +  + Q+ Q I
Sbjct: 1   MLYISGARSVPDEQVRIASTNIDGIGPTKAILVRYRLGVSGNIKMNELTKYHIDQLEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+    +L+R    ++ RL+ +  YRG+ H+ G P+RG RTHTNA T +K
Sbjct: 61  GQDHVGHWELKRGERADLDRLISISRYRGIHHQDGSPLRGHRTHTNAGTFRK 112


>gi|148700464|gb|EDL32411.1| mCG116671 [Mus musculus]
          Length = 152

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|284165825|ref|YP_003404104.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
 gi|284015480|gb|ADB61431.1| ribosomal protein S13P [Haloterrigena turkmenica DSM 5511]
          Length = 174

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V R+L  ++G+G ++++ I ++  +       +L +  + ++ + +
Sbjct: 18  FVRIGQTDLDGTKTVERSLSELNGVGRRTARLIADEADVDRTATFGRLDDDIIDEVVETV 77

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       +++  DL+ T   +I R+  +  Y+G RH+RG  VR
Sbjct: 78  ENYAEEVPDWLNNRQSDFYTGETTHEIGNDLQLTRQHDINRMKMIDSYKGTRHKRGQKVR 137

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 138 GQRTKSTGRTEGTIG 152


>gi|68471071|ref|XP_720312.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
 gi|77022566|ref|XP_888727.1| hypothetical protein CaO19_7018 [Candida albicans SC5314]
 gi|46442174|gb|EAL01465.1| likely cytosolic ribosomal protein S18 [Candida albicans SC5314]
 gi|76573540|dbj|BAE44624.1| hypothetical protein [Candida albicans]
          Length = 135

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   ++  
Sbjct: 7   LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 66

Query: 64  ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                 + +  +L   +  +++RL  +  +RG+RH  GL VRGQ
Sbjct: 67  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 126

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 127 HTKTTSRGR 135


>gi|62989789|emb|CAD91287.1| mitochondrial ribosomal protein RPS13 [Monophyllorchis sp. Cassio
           C282]
          Length = 116

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/112 (37%), Positives = 66/112 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GI  K +  +  +L I    ++ +L +S++ QI Q I
Sbjct: 1   MSYISGARSFPDEQVRIASTKMDGIAHKKAMKVRYRLGISGNIKMTELTKSQIDQIEQMI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            QD+ V  +L+R    +I+R + L  YRG+RH+ G P+RGQRTHT ART +K
Sbjct: 61  SQDHVVHWELKRGERADIERSISLSRYRGIRHQDGSPLRGQRTHTIARTCRK 112


>gi|84394568|ref|ZP_00993272.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01]
 gi|84374788|gb|EAP91731.1| 30S ribosomal protein S13 [Vibrio splendidus 12B01]
          Length = 82

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I  + ++ +L E ++ Q+R  +
Sbjct: 1  MARIAGINIPDHKHSVIALTAIYGIGKTRSQAILAEVGIAEDAKISELTEEQIDQLRDGV 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMD 83
           + Y VEGDLRR V+MNIKRLMD
Sbjct: 61 AK-YTVEGDLRREVSMNIKRLMD 82


>gi|6755368|ref|NP_035426.1| 40S ribosomal protein S18 [Mus musculus]
 gi|11968182|ref|NP_072045.1| 40S ribosomal protein S18 [Homo sapiens]
 gi|47087103|ref|NP_998722.1| 40S ribosomal protein S18 [Rattus norvegicus]
 gi|47522714|ref|NP_999105.1| 40S ribosomal protein S18 [Sus scrofa]
 gi|75812924|ref|NP_001028786.1| 40S ribosomal protein S18 [Bos taurus]
 gi|189339186|ref|NP_001041547.1| 40S ribosomal protein S18 [Canis lupus familiaris]
 gi|55626404|ref|XP_518400.1| PREDICTED: similar to ribosomal protein [Pan troglodytes]
 gi|114606875|ref|XP_001170296.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes]
 gi|149732112|ref|XP_001497114.1| PREDICTED: similar to ribosomal protein S18 [Equus caballus]
 gi|291396021|ref|XP_002714578.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
 gi|291408932|ref|XP_002720764.1| PREDICTED: ribosomal protein S18-like [Oryctolagus cuniculus]
 gi|293340584|ref|XP_002724624.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|293351981|ref|XP_002727879.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|296197873|ref|XP_002746441.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus]
 gi|297661285|ref|XP_002809198.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
 gi|301757095|ref|XP_002914379.1| PREDICTED: 40S ribosomal protein S18-like [Ailuropoda melanoleuca]
 gi|50403620|sp|P62271|RS18_RAT RecName: Full=40S ribosomal protein S18
 gi|50403625|sp|P62269|RS18_HUMAN RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
           Short=Ke3
 gi|54039371|sp|P62272|RS18_PIG RecName: Full=40S ribosomal protein S18
 gi|54039385|sp|P62270|RS18_MOUSE RecName: Full=40S ribosomal protein S18; AltName: Full=Ke-3;
           Short=Ke3
 gi|62900940|sp|Q5TJE9|RS18_CANFA RecName: Full=40S ribosomal protein S18
 gi|91207636|sp|Q3T0R1|RS18_BOVIN RecName: Full=40S ribosomal protein S18
 gi|206558173|sp|A5JST6|RS18_CAPHI RecName: Full=40S ribosomal protein S18
 gi|187609266|pdb|2ZKQ|MM Chain m, Structure Of A Mammalian Ribosomal 40s Subunit Within An
           80s Complex Obtained By Docking Homology Models Of The
           Rna And Proteins Into An 8.7 A Cryo-Em Map
 gi|198580|gb|AAA16795.1| ribosomal protein [Mus musculus]
 gi|433447|emb|CAA40750.1| ribosomal protein S18 [Rattus rattus]
 gi|1841304|dbj|BAA19211.1| ribosomal protein [Sus scrofa]
 gi|3811382|gb|AAC69898.1| ribosomal protein subunit S18 [Mus musculus]
 gi|3820980|emb|CAA20231.1| ribosomal protein S18 [Homo sapiens]
 gi|4050105|gb|AAC97978.1| RPS18 [Mus musculus]
 gi|6006558|emb|CAB56794.1| ribosomal protein S18 [Homo sapiens]
 gi|26341376|dbj|BAC34350.1| unnamed protein product [Mus musculus]
 gi|46237544|emb|CAE83925.1| ribosomal protein S18 [Rattus norvegicus]
 gi|51980402|gb|AAH81459.1| Ribosomal protein S18 [Mus musculus]
 gi|51980469|gb|AAH81458.1| Ribosomal protein S18 [Mus musculus]
 gi|55956952|emb|CAI11439.1| ribosomal protein S18 [Canis lupus familiaris]
 gi|55961242|emb|CAI17530.1| ribosomal protein S18 [Homo sapiens]
 gi|55961291|emb|CAI18076.1| ribosomal protein S18 [Homo sapiens]
 gi|55961522|emb|CAI18127.1| ribosomal protein S18 [Homo sapiens]
 gi|55961771|emb|CAI17656.1| ribosomal protein S18 [Homo sapiens]
 gi|57209749|emb|CAI41848.1| ribosomal protein S18 [Homo sapiens]
 gi|62533209|gb|AAH93500.1| Ribosomal protein S18 [Mus musculus]
 gi|72679475|gb|AAI00605.1| Ribosomal protein S18 [Mus musculus]
 gi|74141885|dbj|BAE41010.1| unnamed protein product [Mus musculus]
 gi|74195924|dbj|BAE30520.1| unnamed protein product [Mus musculus]
 gi|74226926|dbj|BAE27106.1| unnamed protein product [Mus musculus]
 gi|74268023|gb|AAI02294.1| Ribosomal protein S18 [Bos taurus]
 gi|75517276|gb|AAI01787.1| Ribosomal protein S18 [Homo sapiens]
 gi|75517910|gb|AAI01789.1| Ribosomal protein S18 [Homo sapiens]
 gi|76779249|gb|AAI06064.1| Ribosomal protein S18 [Homo sapiens]
 gi|117558483|gb|AAI26073.1| Ribosomal protein S18 [Rattus norvegicus]
 gi|119624100|gb|EAX03695.1| ribosomal protein S18, isoform CRA_b [Homo sapiens]
 gi|147744669|gb|ABQ51201.1| ribosomal protein S18 [Capra hircus]
 gi|148678285|gb|EDL10232.1| mCG23000, isoform CRA_b [Mus musculus]
 gi|149043391|gb|EDL96842.1| rCG60872, isoform CRA_a [Rattus norvegicus]
 gi|168985411|emb|CAQ08021.1| ribosomal protein S18 [Homo sapiens]
 gi|168985731|emb|CAQ08251.1| ribosomal protein S18 [Homo sapiens]
 gi|197127178|gb|ACH43676.1| putative ribosomal protein S18 [Taeniopygia guttata]
 gi|296474555|gb|DAA16670.1| 40S ribosomal protein S18 [Bos taurus]
 gi|307685871|dbj|BAJ20866.1| ribosomal protein S18 [synthetic construct]
          Length = 152

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|281338468|gb|EFB14052.1| hypothetical protein PANDA_002275 [Ailuropoda melanoleuca]
          Length = 152

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|268164091|ref|YP_003288868.1| ribosomal protein S13 [Saccharina coriacea]
 gi|262318401|dbj|BAI48720.1| ribosomal protein S13 [Saccharina coriacea]
          Length = 119

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSVSHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|209738282|gb|ACI70010.1| 40S ribosomal protein S18 [Salmo salar]
          Length = 152

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV  +   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTDDEVEGVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|242019380|ref|XP_002430139.1| ribosomal protein S18, putative [Pediculus humanus corporis]
 gi|212515230|gb|EEB17401.1| ribosomal protein S18, putative [Pediculus humanus corporis]
          Length = 137

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 25/140 (17%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
              NI   ++V+ A+  I G+G + +  +  K  I  ++R  +  E EV +I   +    
Sbjct: 1   MNTNIDGKRKVMFAMTSIKGVGRRFANIVLKKADIDLDKRAGECSEEEVDKIITVLTNPR 60

Query: 65  Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           Q                         +L   +  +++RL  +  +RG+RH  GL VRGQ 
Sbjct: 61  QYKIPDWFLNRQKDIQDGKYSQLTSTNLDSKLREDLERLKKIKAHRGMRHYWGLRVRGQH 120

Query: 103 THTNARTRKKFGKGGVARKR 122
           T T  R  +     GV++K+
Sbjct: 121 TKTTGRRGRTV---GVSKKK 137


>gi|126179743|ref|YP_001047708.1| 30S ribosomal protein S13P [Methanoculleus marisnigri JR1]
 gi|158706247|sp|A3CWH6|RS13_METMJ RecName: Full=30S ribosomal protein S13P
 gi|125862537|gb|ABN57726.1| SSU ribosomal protein S13P [Methanoculleus marisnigri JR1]
          Length = 149

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V  AL  I GIG  +S+ I    A+ P   + +L +  V +I  A+
Sbjct: 9   FVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAV 68

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           +                       + +  DL      ++ R+  +  YRG+RH  G  VR
Sbjct: 69  DTYTEQVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVR 128

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  RT       GV RK+
Sbjct: 129 GQRTKSTGRTGTTV---GVKRKK 148


>gi|307352909|ref|YP_003893960.1| 30S ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
 gi|307156142|gb|ADN35522.1| ribosomal protein S13P [Methanoplanus petrolearius DSM 11571]
          Length = 148

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 58/143 (40%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R+   ++   K V  AL  + GIG  +S  I     + P   +  L E  V +IR+ +
Sbjct: 9   FVRVENTDLDGTKSVQVALTGLAGIGMHTSVSIAQMAGVDPRATLGLLEEDVVDRIREVV 68

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E    +  DLR  V  ++ R+  + CYRG+RH     VR
Sbjct: 69  SGYTEKVPAWMLNRQKDVYTGEAKQLLGTDLRMAVDDDVNRMRKIRCYRGIRHETHQKVR 128

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV++K+
Sbjct: 129 GQRTKSTGRHGATV---GVSKKK 148


>gi|159476746|ref|XP_001696472.1| ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Chlamydomonas reinhardtii]
 gi|158282697|gb|EDP08449.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
          Length = 153

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ A+  I GIG + S  +C K  +   +R  +    E+ ++   +
Sbjct: 13  ILRLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIV 72

Query: 61  ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++D++           L   +  +++RL  +  +RGLRH  GL V
Sbjct: 73  ANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRNHRGLRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GVA+K+
Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153


>gi|2129263|pir||F64323 ribosomal protein S18 - Methanococcus jannaschii
          Length = 186

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49
           R++  ++   K+++ AL  I+G+G   ++ I     + P +    L              
Sbjct: 47  RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLAD 106

Query: 50  ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                  S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP RG
Sbjct: 107 PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 166

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+R++
Sbjct: 167 QRTKSTFRRGPTV---GVSRRK 185


>gi|145539402|ref|XP_001455391.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423199|emb|CAK87994.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLSKRAGELTDDEAHKITEVI 73

Query: 61  ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV RK+
Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154


>gi|309262972|ref|XP_003085935.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|148668546|gb|EDL00865.1| mCG114988 [Mus musculus]
          Length = 152

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGQTV---GVSKKK 152


>gi|145479337|ref|XP_001425691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145534229|ref|XP_001452859.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392763|emb|CAK58293.1| unnamed protein product [Paramecium tetraurelia]
 gi|124420558|emb|CAK85462.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV RK+
Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154


>gi|55376996|ref|YP_134846.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049]
 gi|266965|sp|Q00861|RS13_HALMA RecName: Full=30S ribosomal protein S13P; AltName: Full=HmaS13
 gi|148770|gb|AAA73209.1| ribosomal protein HmaS13 [Haloarcula marismortui]
 gi|55229721|gb|AAV45140.1| 30S ribosomal protein S13P [Haloarcula marismortui ATCC 43049]
          Length = 177

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  ++GIG ++++ I  K  +       +L +  + ++ + +
Sbjct: 23  FVRIGQTDLDGTKSVERALTELNGIGHRAARIIAQKADVDRRAVFGKLDDDVIERVVERV 82

Query: 61  EQ---------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       ++   DL+ T   +I R+  +  YRG+RH+RG  VR
Sbjct: 83  ENFADDVPEWMTNHQKDYFTGETTHETGNDLQLTRRQDINRMKMIDSYRGVRHKRGQKVR 142

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 143 GQRTKSTGRTEGTIG 157


>gi|68479427|ref|XP_716245.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|68479596|ref|XP_716162.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|46437820|gb|EAK97160.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
 gi|46437908|gb|EAK97247.1| potential mitochondrial ribosomal protein S13 [Candida albicans
           SC5314]
          Length = 122

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           + G +I     V   L   I GIG+++++ +  K+ I P  R++QL E +++ + + I Q
Sbjct: 5   VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
              VEG L+  +  +IK    +G Y G RH  G PVRGQRT TN  T ++  + 
Sbjct: 65  -LLVEGHLKHKINNDIKMKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117


>gi|302829312|ref|XP_002946223.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
 gi|300269038|gb|EFJ53218.1| component of cytosolic 80S ribosome and 40S small subunit [Volvox
           carteri f. nagariensis]
          Length = 153

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ A+  I GIG + S  +C K  +   +R  +    E+ ++   +
Sbjct: 13  ILRLLNTNVDGKNKIMYAMTAIKGIGRRFSNLVCKKAEVDLRKRAGECSADELERMMGIV 72

Query: 61  ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++D++           L   +  +++RL  +  +RGLRH  GL V
Sbjct: 73  ANPRAYKIPDWFLNRQKDHKTGRYSQLTSSGLDTALRDDLERLKKIRNHRGLRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GVA+K+
Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153


>gi|300521596|gb|ADK26009.1| r-protein S13p [Candidatus Nitrososphaera gargensis]
          Length = 215

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIAG +I  +K+V+ A+  I GIG+  +Q +   L I P++RV  L +SE+ ++ QAI
Sbjct: 11  ILRIAGKDIEGSKKVIVAVSEIKGIGYNFAQVLTQTLNINPDKRVGFLTDSELGELEQAI 70

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  DL    + +I+R   +  +RG RH  GL V
Sbjct: 71  AHPDKAGVPAWYLNRRKNMDTGSNHHMITSDLDFASSNDIEREKMVMSWRGYRHMFGLRV 130

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R   K G  GV + +
Sbjct: 131 RGQRTRTTGR---KGGAVGVKKVK 151


>gi|293347481|ref|XP_002726601.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|330506853|ref|YP_004383281.1| 30S ribosomal protein S13p/S18e [Methanosaeta concilii GP-6]
 gi|328927661|gb|AEB67463.1| ribosomal protein S13p/S18e [Methanosaeta concilii GP-6]
          Length = 181

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   ++V  AL  I G+G + ++    +  + P   +  L ++E+ ++++ +
Sbjct: 29  IVRILNTDLAGKRQVHMALTGIKGVGRRCAKIFTERAGVDPNATLGLLPDAEIDKLKKVV 88

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E+D                      + +  DL  T+  ++  +  +  Y+GLRH RGL V
Sbjct: 89  EEDAINILPVWMVNRRGDIETGKDIHIMGMDLNMTLREDLDLMKKMRSYKGLRHERGLRV 148

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T +  RT       GV+RKR
Sbjct: 149 RGQKTRSTGRTG---AIVGVSRKR 169


>gi|313200103|ref|YP_004038761.1| 30S ribosomal protein S13 [Methylovorus sp. MP688]
 gi|312439419|gb|ADQ83525.1| ribosomal protein S13 [Methylovorus sp. MP688]
          Length = 86

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 36  KLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
              +    ++  L ++EV ++R  + +  +VEGDLRR V MNIKRLMDLGCYRG+RHRRG
Sbjct: 2   AAGVAGTAKIKDLNDAEVEKLRDEVAK-LKVEGDLRREVTMNIKRLMDLGCYRGVRHRRG 60

Query: 96  LPVRGQRTHTNARTRKKFGKGGVARK 121
           LPVRGQRT TNARTRK   K   A K
Sbjct: 61  LPVRGQRTKTNARTRKGPIKPIKASK 86


>gi|326482074|gb|EGE06084.1| 40S ribosomal protein S13 [Trichophyton equinum CBS 127.97]
          Length = 200

 Score =  111 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+
Sbjct: 82  MVFILGTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGAL 141

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             + ++E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 142 S-NMKIENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 195


>gi|15150734|ref|NP_150400.1| ribosomal protein S13 [Pylaiella littoralis]
 gi|15147740|emb|CAC50841.1| ribosomal protein S13 [Pylaiella littoralis]
          Length = 119

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G +IP  K +V+++ +I+G+G   S  +C K     + R   +  S+   +    
Sbjct: 1   MPYIVGTSIPEDKVLVQSVGHIYGLGLTQSISLCKKAGFGSDSRGRHISFSKGKLLGNLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     IKRL  L  YRG RHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFTHDKIKRLCSLSTYRGSRHRKGLPVRGQRTHTNAKKR 111


>gi|255731334|ref|XP_002550591.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
 gi|240131600|gb|EER31159.1| 40S ribosomal protein S18 [Candida tropicalis MYA-3404]
          Length = 133

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI    +++ AL  I G+G + +  +C K  +   +R  +L + E+ +I   ++  
Sbjct: 5   LLNTNIDGRIKIMYALTKIRGVGRRYANLVCKKADVELTKRAGELTQEELERIVTIMQNP 64

Query: 64  ----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                                 + +  +L   +  +++RL  +  +RG+RH  GL VRGQ
Sbjct: 65  TNYKIPAWFLNRQKDQVDGKDYHVLANNLESKLRDDLERLKKIRSHRGIRHFWGLKVRGQ 124

Query: 102 RTHTNARTR 110
            T T +R R
Sbjct: 125 HTKTTSRGR 133


>gi|145483041|ref|XP_001427543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394625|emb|CAK60145.1| unnamed protein product [Paramecium tetraurelia]
          Length = 155

 Score =  111 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +R+   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQRLAYGIRSIKGIGRRFAIQICKVLRLDLTKRAGELTDDEAHKITEVI 73

Query: 61  ---------------------EQDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 ++YQV   +L   +  +++R+  + C RGLRH  GL V
Sbjct: 74  KSPEAYNIPRWFLNRQRDFKDGKNYQVTTNELETKLREDLERMKKIKCNRGLRHHWGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV RK+
Sbjct: 134 RGQHTKTTGRGGQTL---GVERKK 154


>gi|268053547|ref|YP_003288906.1| ribosomal protein S13 [Saccharina japonica]
 gi|268053586|ref|YP_003288944.1| ribosomal protein S13 [Saccharina religiosa]
 gi|268053625|ref|YP_003288982.1| ribosomal protein S13 [Saccharina ochotensis]
 gi|268053664|ref|YP_003289059.1| ribosomal protein S13 [Saccharina diabolica]
 gi|268053703|ref|YP_003289110.1| ribosomal protein S13 [Saccharina longipedalis]
 gi|262318167|dbj|BAI48492.1| ribosomal protein S13 [Saccharina japonica]
 gi|262318206|dbj|BAI48530.1| ribosomal protein S13 [Saccharina religiosa]
 gi|262318245|dbj|BAI48568.1| ribosomal protein S13 [Saccharina ochotensis]
 gi|262318284|dbj|BAI48606.1| ribosomal protein S13 [Saccharina diabolica]
 gi|262318323|dbj|BAI48644.1| ribosomal protein S13 [Saccharina longipedalis]
          Length = 119

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGKNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|74197062|dbj|BAE35083.1| unnamed protein product [Mus musculus]
 gi|74204663|dbj|BAE35401.1| unnamed protein product [Mus musculus]
          Length = 152

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIRGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|325958562|ref|YP_004290028.1| 30S ribosomal protein S13P [Methanobacterium sp. AL-21]
 gi|325329994|gb|ADZ09056.1| ribosomal protein S13P [Methanobacterium sp. AL-21]
          Length = 149

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI+  ++   K +  AL  I GIG   S+ +C         ++  L + +V+++ +A+
Sbjct: 8   MVRISRKDVDGKKTIENALADIKGIGRALSRALCQVAGFDATMQIGYLPDKDVLKLEEAV 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + +E DL   +  ++ R+     Y+G RH  GLPV
Sbjct: 68  KAPQQFELPEWMLNRRNDYETGETVHLIESDLTMRLRDDLNRMKKTRSYKGRRHEVGLPV 127

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R  K  G
Sbjct: 128 RGQRTKSTFRKGKSVG 143


>gi|320170357|gb|EFW47256.1| ribosomal protein S18 [Capsaspora owczarzaki ATCC 30864]
          Length = 152

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    ++  AL  I G+G + S  +C K  I  ++R  ++ E+EV ++   +
Sbjct: 12  ILRMLNTNIDGKVKIPFALTKIKGVGRRYSNLVCKKADIDLKKRAGEVNEAEVERLLSIL 71

Query: 61  EQD--YQV--------------------EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +    Y++                       L   +  +I+RL  +  +RGLRH  G+ V
Sbjct: 72  QNPRSYKIPDWFLNRQKDIVDGKTSQVLSNGLDNKLREDIERLKKIRAHRGLRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV  K+
Sbjct: 132 RGQHTKTTGRHGRTV---GVGAKK 152


>gi|241959230|ref|XP_002422334.1| mitochondrial ribosomal protein of the small ribosomal subunit,
           putative [Candida dubliniensis CD36]
 gi|223645679|emb|CAX40340.1| mitochondrial ribosomal protein of the small ribosomal subunit,
           putative [Candida dubliniensis CD36]
          Length = 122

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           + G +I     V   L   I GIG+++++ +  K+ I P  R++QL E +++ + + I Q
Sbjct: 5   VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
              VEG L+  +  +IK    +G Y G RH  G PVRGQRT TN  T ++  + 
Sbjct: 65  -LLVEGHLKHKINNDIKLKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117


>gi|156936975|ref|YP_001434771.1| 30S ribosomal protein S13P [Ignicoccus hospitalis KIN4/I]
 gi|156565959|gb|ABU81364.1| SSU ribosomal protein S13P [Ignicoccus hospitalis KIN4/I]
          Length = 152

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 25/143 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   +I  +   V  L  I GIG+ ++  I  KL I P  R+  L E+ + ++ + +
Sbjct: 11  IVRIGDTDIDGSLPAVYGLAKIKGIGYTTALAILRKLGIDPHMRLGYLSETRIRELDEKV 70

Query: 61  ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    DL             +I+R   +  +RGLRH  GL V
Sbjct: 71  RDITQLGFPSWLYNRRKDYTTGKDLHLIGADLVFYARQDIEREKRIKSWRGLRHSLGLKV 130

Query: 99  RGQRTHTNARTRKKFGKGGVARK 121
           RGQRT T  R        GV++K
Sbjct: 131 RGQRTATTGRLGMTV---GVSKK 150


>gi|46126121|ref|XP_387614.1| hypothetical protein FG07438.1 [Gibberella zeae PH-1]
          Length = 119

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  I   +
Sbjct: 1   MVFLLGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSITAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRGQRT T   +  +  +
Sbjct: 61  SQ-MTIETDARRLVQENIRRLKDMGSYRGRRHAMGLPVRGQRTRTQTASANRLNR 114


>gi|293453617|ref|ZP_06664036.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088]
 gi|291321743|gb|EFE61174.1| 30S ribosomal protein S13p/S18e [Escherichia coli B088]
          Length = 85

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/84 (54%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
                I  + ++ +L E ++  +R  + + + VEGDLRR ++M+IKRLMDLGCYRGLRHR
Sbjct: 1   MAAAGIAEDVKISELSEGQIDTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHR 59

Query: 94  RGLPVRGQRTHTNARTRKKFGKGG 117
           RGLPVRGQRT TNARTRK   K  
Sbjct: 60  RGLPVRGQRTKTNARTRKGPRKPI 83


>gi|268164052|ref|YP_003288817.1| ribosomal protein S13 [Saccharina angustata]
 gi|262318362|dbj|BAI48682.1| ribosomal protein S13 [Saccharina angustata]
          Length = 119

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++ +I+GIG   S+ +C K     + R   +   +   +    
Sbjct: 1   MPFIIGTPIPEDKVLVQSISHIYGIGLSQSKILCKKAGFGSDSRGSHVTFLKGRNLENLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  L  YRGLRHR+GLPVRGQRTHTNA+ R
Sbjct: 61  EATPLPLGADLRRFKNDKIRRLCVLSTYRGLRHRKGLPVRGQRTHTNAKKR 111


>gi|171693473|ref|XP_001911661.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946685|emb|CAP73488.1| unnamed protein product [Podospora anserina S mat+]
          Length = 119

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 3/121 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  + GVN   AK V +AL + + +G +++  I  K +I P  ++  L    V  +   +
Sbjct: 1   MVSLFGVNFHEAKLVQKALQHFYALGSQTATRIMAKHSIHPRAKIGTLSPKTVTALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                +E D R+ +  NIKRL D+G YRG RH   LPVRGQRT    +T  K  +  V R
Sbjct: 61  ST-MVIESDARKIIQDNIKRLRDMGTYRGRRHAMNLPVRGQRTRNQNKTAIKLNR--VER 117

Query: 121 K 121
           K
Sbjct: 118 K 118


>gi|159041085|ref|YP_001540337.1| 30S ribosomal protein S13P [Caldivirga maquilingensis IC-167]
 gi|157919920|gb|ABW01347.1| ribosomal protein S13 [Caldivirga maquilingensis IC-167]
          Length = 162

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 21/129 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +  I   ++  +K V  AL  I GIG  ++  IC  L I P  ++ +L E  + +I  A+
Sbjct: 10  IVHIGDTDLDGSKAVAYALARIKGIGVSTAVAICRNLGINPLVKLGELNEEMIRKIDWAV 69

Query: 61  EQDYQ---------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
              +Q                     +  DL  T   +I+R   +  +RG+RH  GL VR
Sbjct: 70  RNLHQAAPAWFVNRPKDPETGRNIHLIGADLILTARNDIERERRILSWRGIRHNLGLKVR 129

Query: 100 GQRTHTNAR 108
           GQRT T  R
Sbjct: 130 GQRTRTTGR 138


>gi|109073773|ref|XP_001099137.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
 gi|109073775|ref|XP_001099240.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
 gi|297292315|ref|XP_002804060.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
 gi|297292317|ref|XP_002804061.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
          Length = 152

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRQKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ   T  R  +     GV++K+
Sbjct: 132 RGQHAKTTGRCGRTV---GVSKKK 152


>gi|238880236|gb|EEQ43874.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 122

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           + G +I     V   L   I GIG+++++ +  K+ I P  R++QL E +++ + + I Q
Sbjct: 5   VFGKSIKHNFPVRIGLAKTIFGIGYQTAERLMAKVGIYPNCRMNQLTEPQIMDLNKEISQ 64

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
              VEG L+  +  +IK    +G Y G RH  G PVRGQRT TN  T ++  + 
Sbjct: 65  -LLVEGHLKHKIINDIKMKRTIGSYAGSRHALGFPVRGQRTKTNGSTARQLNRT 117


>gi|109097924|ref|XP_001085646.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca
           mulatta]
 gi|297263054|ref|XP_002798738.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
 gi|297263056|ref|XP_002798739.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
          Length = 152

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIYGQRKIAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +  +Q                      +   L   +  +++RL  +  +RGL H  GL V
Sbjct: 72  QNPHQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|145932363|ref|YP_001165412.1| ribosomal protein S13 [Phytophthora sojae]
 gi|110169606|gb|ABG54072.1| ribosomal protein S13 [Phytophthora sojae]
          Length = 137

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 64/109 (58%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTILYGINEYQSKKICKNIGINPQITLNKLKNNHVNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
            ++ +VE  L+++    +  L+++   RG+R  +GLPVRGQRTHTNA+T
Sbjct: 61  NKNLKVEQFLKKSKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNAKT 109


>gi|15790213|ref|NP_280037.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1]
 gi|169235942|ref|YP_001689142.1| 30S ribosomal protein S13P [Halobacterium salinarum R1]
 gi|13124533|sp|Q9V2W4|RS13_HALSA RecName: Full=30S ribosomal protein S13P; AltName: Full=HS13
 gi|6172227|dbj|BAA85895.1| ribosomal protein HS13 [Halobacterium salinarum]
 gi|10580671|gb|AAG19517.1| 30S ribosomal protein S13P [Halobacterium sp. NRC-1]
 gi|167727008|emb|CAP13794.1| ribosomal protein S13 [Halobacterium salinarum R1]
          Length = 171

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   K V RAL  + G+G + ++ + ++  +     +  L +  +  +  A+
Sbjct: 16  FVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAV 75

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  +    D+  T   +I R+  +  Y+G+RH RG  VR
Sbjct: 76  DSFTEHAPAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVR 135

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 136 GQRTKSTGRTEGTIG 150


>gi|293359376|ref|XP_002729551.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R        GV++K+
Sbjct: 132 RGQHTKTTGRRGHTV---GVSKKK 152


>gi|50261289|ref|YP_052897.1| ribosomal protein S13 [Saprolegnia ferax]
 gi|48237602|gb|AAT40651.1| ribosomal protein S13 [Saprolegnia ferax]
          Length = 117

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 66/117 (56%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +  ++ +L  ++GI    S+ IC  + I P+  +++L ++++ ++   I
Sbjct: 1   MLYIFDKAISNSNSILYSLTILYGINKFQSKRICKNIGINPQTTINKLKKNQLNRLINYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
            ++ ++E  L++    N   L+++   RG+RH  GLPVRGQRTHTNA+T KK     
Sbjct: 61  NKNIKIEQLLKKIKKDNFNNLLNIKTNRGIRHNLGLPVRGQRTHTNAKTSKKLKNTI 117


>gi|255727707|ref|XP_002548779.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404]
 gi|240133095|gb|EER32651.1| hypothetical protein CTRG_03076 [Candida tropicalis MYA-3404]
          Length = 122

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           + G +I     V   L   I GIG+++++ +  K+ I P  R++QL E +++ + + I Q
Sbjct: 5   VFGKSIKHNFPVRIGLAKAIFGIGYQTAEKLMAKVGIYPNCRMNQLSEPQIMDLNKEISQ 64

Query: 63  DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
              VEG L++ +  +IK     G Y G RH  G PV GQRT TNA T +K  K
Sbjct: 65  -LLVEGHLKQKINNDIKLKRTTGSYAGSRHALGFPVHGQRTRTNASTARKLNK 116


>gi|113170478|ref|YP_717269.1| Rps13 [Ostreococcus tauri]
 gi|112806885|emb|CAL36391.1| unnamed protein product [Ostreococcus tauri]
          Length = 116

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 61/116 (52%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  +    +     + + L  I+GI    +  IC++L +     V  L   +  ++ + +
Sbjct: 1   MVFLFQKKLTPTNTIRKELKKIYGINSFLANQICDQLGLHTTVTVGALSLDQTEKLGRIL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           +  Y  E DL++ V  N +R + +GCYRG R  + LP+RGQRTHTNA+T K+  + 
Sbjct: 61  QYYYLTEHDLKKQVQGNFQRFIQIGCYRGFRVTQRLPLRGQRTHTNAKTAKRILRA 116


>gi|119600195|gb|EAW79789.1| hCG1777176, isoform CRA_b [Homo sapiens]
          Length = 152

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K      +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGQRKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTDDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|67478589|ref|XP_654681.1| 40S ribosomal protein S18 [Entamoeba histolytica HM-1:IMSS]
 gi|167379766|ref|XP_001735274.1| 40S ribosomal protein S18 [Entamoeba dispar SAW760]
 gi|56471746|gb|EAL49291.1| 40S ribosomal protein S18, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|165902807|gb|EDR28533.1| 40S ribosomal protein S18, putative [Entamoeba dispar SAW760]
          Length = 143

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I   +
Sbjct: 1   MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 60

Query: 61  EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                      +   +   +  +I+ L  +  +RGLRH  GL V
Sbjct: 61  NNPLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 120

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+R +
Sbjct: 121 RGQHTKTTGRRGRTV---GVSRTK 141


>gi|261403748|ref|YP_003247972.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7]
 gi|261370741|gb|ACX73490.1| ribosomal protein S13P [Methanocaldococcus vulcanius M7]
          Length = 154

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 25/143 (17%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI- 60
            R++  +I   K+++ AL  I+G+G   ++ I     + P++    L E E+ +I + + 
Sbjct: 14  VRVSRTDIDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPDKLAGYLTEEEIKKIEEVLI 73

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  + +E DL      +I RL  + CYRG+RH  GLP R
Sbjct: 74  DPAKFGIPSWMFNRRKDYITGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCR 133

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R        GV+R++
Sbjct: 134 GQRTKSTFRRGPTV---GVSRRK 153


>gi|84508569|ref|YP_448617.1| ribosomal protein S13 [Fucus vesiculosus]
 gi|39653292|gb|AAR29311.1| ribosomal protein S13 [Fucus vesiculosus]
          Length = 119

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 1/111 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G  IP  K +V+++  I+GIG   S+ +C K     + R   +  S+   +    
Sbjct: 1   MPFIIGTPIPEDKILVQSVSQIYGIGLSQSKILCRKAGFGQDCRGKNVSFSQGKILGNLA 60

Query: 61  EQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
           E     +  DLRR     I+RL  +  YRGLRH++GLP RGQRTHTNA+ R
Sbjct: 61  ENTSLFLGSDLRRFHNDKIRRLCLMSSYRGLRHKKGLPARGQRTHTNAKKR 111


>gi|157361543|gb|ABV44729.1| 40S ribosomal protein S18-like protein [Phlebotomus papatasi]
          Length = 152

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R    NI   ++V  A+  I G+G + +     K  +   +R  +  + EV ++   I
Sbjct: 12  ILRFMNTNIDGKRKVPIAMTAIKGVGRRYANIALKKADVDLSKRAGECTDEEVERVVAVI 71

Query: 61  EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                              L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRIYKIPDWFLNRQKDVTDGKYYQLTSAVLESKLRDDLERLKKICAHRGLRHHWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|282931915|ref|ZP_06337387.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|282932825|ref|ZP_06338225.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|281303054|gb|EFA95256.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
 gi|281303967|gb|EFA96097.1| ribosomal protein S13p/S18e [Lactobacillus jensenii 208-1]
          Length = 86

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 31  QDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90
           + IC    +  + R   L   +  ++R  +++ Y+VEGDLRR ++MNIKRL+D+G YRG+
Sbjct: 1   KKICADAGVSEDIRSKDLTPEDQEKLRAEVDK-YRVEGDLRREISMNIKRLVDIGSYRGV 59

Query: 91  RHRRGLPVRGQRTHTNARTRKKFGKG 116
           RHRRGLPVRGQ T  NARTRK   + 
Sbjct: 60  RHRRGLPVRGQNTKNNARTRKGSKRS 85


>gi|50546092|ref|XP_500573.1| YALI0B06578p [Yarrowia lipolytica]
 gi|49646439|emb|CAG82804.1| YALI0B06578p [Yarrowia lipolytica]
          Length = 156

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 2   ARIAGVNIPRAKRVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G       +V   L   + G+G   ++ +C K+ + P  R+ +L + +++ I + +
Sbjct: 3   VHIMGKRFQNTWKVSYGLSQQVFGVGPFQAKRLCAKIGLYPGMRMGELTQGDIMAIVKEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             +  +E DL + +  +I+R    G Y G RH  G+PV+GQ+T TN +  ++F +
Sbjct: 63  STNVTIESDLAKKINADIERKRKTGSYVGRRHVMGMPVKGQKTRTNGKNARRFNR 117


>gi|89257933|gb|ABD65245.1| ribosomal protein S18 [Stenella coeruleoalba]
          Length = 141

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 1   ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 60

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 61  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 120

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 121 RGQHTKTTGRRGRTV---GVSKKK 141


>gi|219852960|ref|YP_002467392.1| 30S ribosomal protein S13P [Methanosphaerula palustris E1-9c]
 gi|219547219|gb|ACL17669.1| ribosomal protein S13 [Methanosphaerula palustris E1-9c]
          Length = 151

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             R++  ++   K V  AL  I G+G  +S  I  + A+     + +L + +V +IR  +
Sbjct: 11  FVRVSNTDLDGTKSVRVALTGIPGVGRHTSGIITRRAAVNEHELLGRLPDGDVDRIRDVV 70

Query: 61  ---------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                E  + +  DL  T   ++  L  + CYRG+RH  G  VR
Sbjct: 71  TDYGALIPAWMRNRIKDVYTGESKHILGSDLAMTNDEDVNLLRKIRCYRGIRHETGQKVR 130

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  RT       GV RK+
Sbjct: 131 GQRTKSTGRTGTTV---GVKRKK 150


>gi|290985905|ref|XP_002675665.1| ribosomal protein S13 [Naegleria gruberi]
 gi|284089263|gb|EFC42921.1| ribosomal protein S13 [Naegleria gruberi]
          Length = 156

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           R+   NI   +  + AL  + GIG + +  +  K  I   +R  +L E ++ +I+  I  
Sbjct: 16  RLFNTNIEGRRSALYALTSVKGIGRRFAGIVLKKAEIELTKRSGELSEEQINKIQDIILA 75

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                 ++ V   +   +  +++RL  +   RGLRH  GL VRG
Sbjct: 76  PEKYKIPSWFLNRRRDWKSGATEHLVANAVDMYLREDLERLKKIKSERGLRHMWGLRVRG 135

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T  R  K     GV+ K+
Sbjct: 136 QHTKTTGRRGKTV---GVSHKK 154


>gi|326434114|gb|EGD79684.1| 40S ribosomal protein S18 [Salpingoeca sp. ATCC 50818]
          Length = 154

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   + ++ +L  I G+G + S     K  I  ++R  QL   +V +I + +
Sbjct: 12  ILRVLNTNLAGEENIMYSLTAIRGVGRRYSNLCLKKAEINQKQRAGQLNNDDVDRIVKVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      V  DL   +  + +R+  +  +RG+RH  G+ V
Sbjct: 72  QNPLQYKIPKWFLNRQKDPKDGAYQHCVANDLNSKLRDDFERMKKMRLHRGIRHMWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GVA+K+
Sbjct: 132 RGQHTKTTGRRGKTV---GVAKKK 152


>gi|149264635|ref|XP_001473856.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 152

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGL H  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLHHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGQTV---GVSKKK 152


>gi|62083469|gb|AAX62459.1| ribosomal protein S18 [Lysiphlebus testaceipes]
          Length = 155

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   NI   +++  AL  I G+G + +  +  K  I  ++R  +  E E+ +I   I
Sbjct: 15  MLRVMSTNIDGNRKITLALTDIKGVGRRYADMVVKKADIALQKRAGECTEEEIEKIVTII 74

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                          +   +  +++RL  +  ++GLRH  GL V
Sbjct: 75  ANPRHYKIPDYYLNRQKDKVDGKYSQLTGSSVDSKLREDLERLKKIRAHKGLRHYWGLRV 134

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 135 RGQHTKTTGRRGRTV---GVSKKK 155


>gi|312137106|ref|YP_004004443.1| ssu ribosomal protein s13p [Methanothermus fervidus DSM 2088]
 gi|311224825|gb|ADP77681.1| SSU ribosomal protein S13P [Methanothermus fervidus DSM 2088]
          Length = 148

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 23/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  ++   K V  A+  I GIG    + I         +++  L + E+ ++  AI
Sbjct: 8   IVRLARRDLDGNKNVEEAITGIKGIGKALGKAIARVTGF-EGKKIGYLSDEELEKLEDAI 66

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                        + +E DL  T+  +I RL  +  YRG+RH  GLPV
Sbjct: 67  ENPGNYGIPSWMFNRKKDYRTGENKHLIEADLEMTIREDINRLKRIRSYRGIRHELGLPV 126

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT +  R  +  G
Sbjct: 127 RGQRTKSTFRKGQTVG 142


>gi|225734652|gb|ACO25361.1| 40S ribosomal protein S18 [Gillichthys seta]
 gi|226442023|gb|ACO57601.1| 40S ribosomal protein S18 [Gillichthys mirabilis]
          Length = 142

 Score =  109 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 6   ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEEEVERVVTIM 65

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 66  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125

Query: 99  RGQRTHTNARTRKKFG 114
           RGQ T T  R  +  G
Sbjct: 126 RGQHTKTTGRRGRTVG 141


>gi|48478291|ref|YP_023997.1| 30S ribosomal protein S13P [Picrophilus torridus DSM 9790]
 gi|74567419|sp|Q6KZP8|RS13_PICTO RecName: Full=30S ribosomal protein S13P
 gi|48430939|gb|AAT43804.1| small subunit ribosomal protein S13P [Picrophilus torridus DSM
           9790]
          Length = 158

 Score =  109 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG + S+ I  KL + P++R+ +L E ++ ++R+ I
Sbjct: 14  IVRIANKDLNGERPLKLALADLKGIGLRLSETIAKKLDLDPDQRIGELGEDKIEELRKYI 73

Query: 61  E---------------------QDY-QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                     +D+  V  DL   +  +I  +  +  Y+G+RH RGL V
Sbjct: 74  EGKVYDGIPYWMYNHRRDITTGKDFNLVSNDLDLQINDDINLMKKMRSYKGIRHERGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARK 121
           RGQR  +N R  K    G V +K
Sbjct: 134 RGQRMRSNGR--KGLAIGVVRKK 154


>gi|157876640|ref|XP_001686665.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin]
 gi|66476122|gb|AAY51369.1| ribosomal protein S18 [Leishmania major]
 gi|68129740|emb|CAJ09046.1| putative 40S ribosomal protein S18 [Leishmania major strain
           Friedlin]
          Length = 218

 Score =  109 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 78  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 137

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 138 ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 197

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 198 RGQHTCTSGRHGKTV---GVSRGK 218


>gi|118576779|ref|YP_876522.1| ribosomal protein S13 [Cenarchaeum symbiosum A]
 gi|158706221|sp|A0RY01|RS13_CENSY RecName: Full=30S ribosomal protein S13P
 gi|118195300|gb|ABK78218.1| ribosomal protein S13 [Cenarchaeum symbiosum A]
          Length = 227

 Score =  109 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G ++P  K+ V  L  I GIG+  +  I + L I     +  L + +V  I + +
Sbjct: 54  IVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLL 113

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        +    D+  TV  +++R    G ++G RH  GL V
Sbjct: 114 QDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKV 173

Query: 99  RGQRTHTNAR 108
           RGQRT    R
Sbjct: 174 RGQRTRNTGR 183


>gi|210075787|ref|XP_503080.2| YALI0D20614p [Yarrowia lipolytica]
 gi|199425832|emb|CAG81272.2| YALI0D20614p [Yarrowia lipolytica]
          Length = 152

 Score =  109 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ A+C I G+G + +  +C K  +   +R  +L   E+ +I   I
Sbjct: 14  ILRLLNTNVDGRIKVMYAMCKIKGVGRRYANLVCKKADVDLSKRAGELTVEELERIVTII 73

Query: 61  EQD--YQVEG--------------------DLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +    Y++ G                     L   +  +I+RL  +  +RGLRH  G  V
Sbjct: 74  QNPGQYKIPGWFLNRQRDFTDGKDSQLLVNQLDVKLRDDIERLKKIRAHRGLRHYWGYKV 133

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ T T  R  K     G
Sbjct: 134 RGQHTKTTTRKGKIMAHRG 152


>gi|148643485|ref|YP_001273998.1| 30S ribosomal protein S13P [Methanobrevibacter smithii ATCC 35061]
 gi|222445016|ref|ZP_03607531.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350414|ref|ZP_05975831.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
 gi|158706442|sp|A5UN52|RS13_METS3 RecName: Full=30S ribosomal protein S13P
 gi|148552502|gb|ABQ87630.1| ribosomal protein S13p [Methanobrevibacter smithii ATCC 35061]
 gi|222434581|gb|EEE41746.1| hypothetical protein METSMIALI_00632 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861197|gb|EFC93495.1| ribosomal protein S13p/S18e [Methanobrevibacter smithii DSM 2374]
          Length = 147

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 22/135 (16%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI+  ++   K + +AL  I G+G   S  +C  L +  E ++  + + +V++I + +E
Sbjct: 9   VRISRKDVDGNKTIEQALTEIKGVGISLSTTMCRTLDLDSEAQIGYIADEDVLKIEEILE 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + +E DL  T+  ++ R+     Y+G RH  GLPVR
Sbjct: 69  NPQKFNIPNWMLNRREDYETGENIHLIESDLDMTLRDDLNRMKKTRSYKGRRHEAGLPVR 128

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  R     G
Sbjct: 129 GQRTKSTFRNSSSVG 143


>gi|13187|emb|CAA38280.1| ribosomal protein S13 [Oenothera berteroana]
          Length = 114

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M+ I+G      ++V  A   + GIG K +  + ++L      +  +L + ++ QI Q  
Sbjct: 1   MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRSRLG--GNIKRKELTKYQIDQIEQMR 58

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART-RKKFGK 115
            QD+ V  +L+R    +I+R + + CYRG+RH+ G P+RGQR+HTNART RK+  K
Sbjct: 59  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGSPLRGQRSHTNARTSRKRIRK 114


>gi|145357113|ref|XP_001422767.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
 gi|144583010|gb|ABP01084.1| Ribosomal protein S18, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
          Length = 144

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 22/133 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V+ +L  I GIG + S  +C K  I   +R  +L  +E+  +   +
Sbjct: 12  IIRVLNTNVDGREKVMYSLTKIKGIGRRFSNLVCKKAEIDLGKRAGELSAAELESLMVIV 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      V   L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 72  SNPRQFRIPDWFLNRKHDFKDGKFSQLVSNQLDTKLRDDLERLKKMRNHRGLRHYWGIRV 131

Query: 99  RGQRTHTNARTRK 111
           RGQ T T  R R+
Sbjct: 132 RGQHTKTTGRGRR 144


>gi|110816065|ref|YP_684397.1| ribosomal protein S13 [Oltmannsiellopsis viridis]
 gi|86450276|gb|ABC96355.1| ribosomal protein S13 [Oltmannsiellopsis viridis]
          Length = 117

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I        K +  +L    GIG K + +IC+KL +     +  L   ++  +   I
Sbjct: 1   MKYILQTPCDDKKPLKASLQKFLGIGPKKAIEICDKLGVASSMNLSSLNAYQIHVL-TGI 59

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
              Y +   +RR    NI+RL+ +  YRG RH  GLP RGQRT TNA T +KF 
Sbjct: 60  LNSYDIRHSVRRKKRENIQRLVRISSYRGFRHTAGLPCRGQRTKTNANTARKFK 113


>gi|1350947|sp|P49202|RS18_CHLRE RecName: Full=40S ribosomal protein S18
 gi|624957|emb|CAA58668.1| ribosomal protein S18 [Chlamydomonas reinhardtii]
 gi|1587084|prf||2205351A ribosomal protein S18
          Length = 153

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +++ A+  I GIG + S  +C K  +   +   +    E+ ++   +
Sbjct: 13  ILRLLNTNVDGKNKIMYAMTAIRGIGRRFSNLVCKKAEVDLRKAAGECSADELERMMGIV 72

Query: 61  ---------------EQDYQVE-------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++D++           L   +  +++RL  +  +RGLRH  GL V
Sbjct: 73  ANPRAYKIPDWFLNRQKDHKTGRFSQLTSSQLDTVMRDDLERLKKIRGHRGLRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GVA+K+
Sbjct: 133 RGQHTKTTGRAGKTV---GVAKKK 153


>gi|213402553|ref|XP_002172049.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces
          japonicus yFS275]
 gi|212000096|gb|EEB05756.1| mitochondrial 37S ribosomal protein SWS2 [Schizosaccharomyces
          japonicus yFS275]
          Length = 142

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          M  + GV++P  K V  AL   +GIG  +++ IC +L+     ++  L E+++ ++ Q +
Sbjct: 1  MVFLLGVSLPDHKPVKYALTSFYGIGRITAEAICARLSFHDTLKIQDLTETQLTRLSQIL 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
               +E DL+R V  NI R + +  Y+GLRH  G
Sbjct: 61 -NGMTLESDLKRDVQKNIARYVQIRSYKGLRHSAG 94


>gi|9695400|ref|NP_037622.1| ribosomal protein S13 [Phytophthora infestans]
 gi|6692652|gb|AAF24795.1|U17009_28 ribosomal protein S13 [Phytophthora infestans]
 gi|58012158|gb|AAW62566.1| ribosomal protein S13 [Phytophthora infestans]
          Length = 137

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 61/107 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINEFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
            ++ +VE  L++     +  L+++   RG+R  +GLPVRGQRTHTNA
Sbjct: 61  NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107


>gi|1350948|sp|P48151|RS18_ENTHI RecName: Full=40S ribosomal protein S18
 gi|509603|gb|AAD09140.1| ribosomal protein S18 [Entamoeba histolytica]
          Length = 155

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   ++V  AL  I G G + +  +C +  I   +R   +  +E+ +I   +
Sbjct: 13  MLRVCNTNLDGRRKVPYALTGIKGCGRRYAYLVCKRAGIDVNKRAGLMTPAEIEKIVDIL 72

Query: 61  EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                      +   +   +  +I+ L  +  +RGLRH  GL V
Sbjct: 73  TTQLNYKIPVWFLNRQKDNKDGKDSQLIANAVETRLREDIEALKKMRAHRGLRHYWGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV+R +
Sbjct: 133 RGQNTKTTGRRGRTV---GVSRTK 153


>gi|16082067|ref|NP_394493.1| 30S ribosomal protein S13P [Thermoplasma acidophilum DSM 1728]
 gi|32363410|sp|Q9HJD6|RS13_THEAC RecName: Full=30S ribosomal protein S13P
 gi|10640348|emb|CAC12162.1| probable ribosomal protein S13 [Thermoplasma acidophilum]
          Length = 171

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 23/142 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG +    I  +L +P ++++ +L E ++ ++R+ +
Sbjct: 31  IVRIANKDLNGERLLPLALSDLKGIGERLGYVIAERLDLPIDKKIGELKEEQLEKLREYV 90

Query: 61  E-QDY--------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E ++Y                     V  DL   V  +I  +  +  Y+G+RH +G  VR
Sbjct: 91  EAKEYDLPEWLLNHRREPVTGKNLNLVSTDLEIQVQEDINLMKKIRSYKGIRHEKGKKVR 150

Query: 100 GQRTHTNARTRKKFGKGGVARK 121
           GQRT +N R  K    G V +K
Sbjct: 151 GQRTRSNGR--KGLSIGVVRKK 170


>gi|66818921|ref|XP_643120.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
 gi|74926730|sp|Q869U7|RS18_DICDI RecName: Full=40S ribosomal protein S18
 gi|60471198|gb|EAL69161.1| 40S ribosomal protein S18 [Dictyostelium discoideum AX4]
          Length = 154

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 22/139 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +++  AL  + G+G + +  +C K  I   +R  +L + EV ++   +
Sbjct: 14  IIRIYNTNVDGRRKIQYALTCVKGVGRRFANLVCKKADIDTSKRAGELSKDEVERLTTIM 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   +      +++RL  +  +RG+RH  GL V
Sbjct: 74  NHPRQYNIPTWFLNRQKDIKDGKYSHCLANQIDVKFREDLERLKKIRAHRGVRHHFGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGG 117
           RGQ+T T  R  +  G  G
Sbjct: 134 RGQKTKTTGRRGRTVGVAG 152


>gi|50409133|ref|XP_456841.1| DEHA2A11704p [Debaryomyces hansenii CBS767]
 gi|49652505|emb|CAG84816.1| DEHA2A11704p [Debaryomyces hansenii]
          Length = 121

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%)

Query: 2   ARIAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I G +I     V   L   I G+G+ +++ IC K+ I P+ R++QL E +++ I + +
Sbjct: 3   VHIFGKSIKHNALVKIGLAKKIFGVGYNTAERICAKVGIYPKMRMNQLTEPQIMAINKEL 62

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             D  +EG L++ +  +IK    +G   G RH  GLPVRGQRT  N++T  +  +
Sbjct: 63  S-DLTIEGHLKQKILDDIKLKRSIGSIAGSRHAAGLPVRGQRTRNNSQTANRLNR 116


>gi|15668361|ref|NP_247157.1| 30S ribosomal protein S13P [Methanocaldococcus jannaschii DSM 2661]
 gi|3334492|sp|P54019|RS13_METJA RecName: Full=30S ribosomal protein S13P
 gi|2826258|gb|AAB98169.1| SSU ribosomal protein S13P (rpsM) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 150

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49
           R++  ++   K+++ AL  I+G+G   ++ I     + P +    L              
Sbjct: 11  RVSRTDLDGNKKLIMALQDIYGVGEAMARAIVRVAKLDPNKLAGYLTEEEVKKIEEVLAD 70

Query: 50  ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                  S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP RG
Sbjct: 71  PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R        GV+R++
Sbjct: 131 QRTKSTFRRGPTV---GVSRRK 149


>gi|114588265|ref|XP_001147895.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes]
 gi|114588267|ref|XP_001147958.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes]
 gi|114588269|ref|XP_001148030.1| PREDICTED: similar to ribosomal protein isoform 3 [Pan troglodytes]
 gi|114588271|ref|XP_001148104.1| PREDICTED: similar to ribosomal protein isoform 4 [Pan troglodytes]
 gi|114588273|ref|XP_001148176.1| PREDICTED: similar to ribosomal protein isoform 5 [Pan troglodytes]
          Length = 152

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K      +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDVQRKIAFAITAIKGVGRRYAHAVLRKADTDLTKRAGELTDDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHLWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|13541393|ref|NP_111081.1| 30S ribosomal protein S13P [Thermoplasma volcanium GSS1]
 gi|32363380|sp|Q97B96|RS13_THEVO RecName: Full=30S ribosomal protein S13P
 gi|14324776|dbj|BAB59703.1| ribosomal protein small subunit S18 [Thermoplasma volcanium GSS1]
          Length = 171

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 23/142 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++   + +  AL  + GIG +    I  +L + P +++ +L E E+ ++++ +
Sbjct: 31  IVRIANKDLNGERPIPLALSDLKGIGLRLGYAIAERLNLQPTKKIGELKEDEIEKLKEYV 90

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                         V  DL   V  +I  +  +  Y+G+RH +G  VR
Sbjct: 91  ENKEYDLPDWLLNHRREPVTGKNLNLVTTDLDVQVQEDINLMKKIRSYKGIRHEKGKKVR 150

Query: 100 GQRTHTNARTRKKFGKGGVARK 121
           GQRT +N R  +    G V +K
Sbjct: 151 GQRTRSNGR--RGLSIGVVRKK 170


>gi|255087650|ref|XP_002505748.1| ribosomal protein S18 [Micromonas sp. RCC299]
 gi|226521018|gb|ACO67006.1| ribosomal protein S18 [Micromonas sp. RCC299]
          Length = 145

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 22/134 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I GIG + S  +C K  I   +R  +L  +E+  +   +
Sbjct: 12  ILRVLNTNVDGRTKVMYALTQIRGIGRRFSNVVCKKAEIDMGKRAGELSAAELESLMVIV 71

Query: 61  EQDY----------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                     QV   L  ++  +++RL  +  +RGLRH  G+ V
Sbjct: 72  SNPRQFRIPDWFLNRQKNYKDGKYIQQVSNQLDTSLRDDLERLKKIRNHRGLRHYWGIRV 131

Query: 99  RGQRTHTNARTRKK 112
           RGQ T T  R  K+
Sbjct: 132 RGQHTKTTGRRGKR 145


>gi|164660596|ref|XP_001731421.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966]
 gi|159105321|gb|EDP44207.1| hypothetical protein MGL_1604 [Malassezia globosa CBS 7966]
          Length = 189

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 46/159 (28%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            + G  +P  K V  AL   +GI + +++ +C ++ +     V  L ES++  +   +  
Sbjct: 2   YLLGTYLPDHKLVRIALTNFYGISYDTARRLCARIQVHERATVSSLTESQITDLSAYLSS 61

Query: 63  DYQV----------------------------------------------EGDLRRTVAM 76
              +                                              E DLRR V  
Sbjct: 62  PGMIPAASPTPTRASLHGSTPKPPMPENPAELPPSQRPKASMDPLRSIVLESDLRREVLA 121

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           NI     +G Y G RH  G PVRGQRT  NA T ++  +
Sbjct: 122 NIAHHRSIGSYVGKRHAGGFPVRGQRTQRNALTARRLNR 160


>gi|37779106|gb|AAP20213.1| 40S ribosomal protein S18 [Pagrus major]
          Length = 140

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 25/140 (17%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
              NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   ++   
Sbjct: 4   LNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERVVTIMQNPR 63

Query: 65  Q----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
           Q                      +   L   +  +++RL  +  +RGLRH  GL VRGQ 
Sbjct: 64  QYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH 123

Query: 103 THTNARTRKKFGKGGVARKR 122
           T T  R  +     GV++K+
Sbjct: 124 TKTTGRRGRTV---GVSKKK 140


>gi|167042556|gb|ABZ07280.1| putative ribosomal protein S13/S18 [uncultured marine microorganism
           HF4000_ANIW133F6]
          Length = 155

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  +I   + + + L  I G+G +++  +C+   I   +    L + E  +IR  I
Sbjct: 16  ILRLADSDIDGLRPIAQGLTSIGGVGQRTAIQLCSMADIDGTKLGGHLTDEEQDRIRSTI 75

Query: 61  EQD---------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           ++                      + +  +++ T+  +I RL  +  YRG+RHR G  VR
Sbjct: 76  DEYALNVPWWLVNRQRDLQSNEDAHIIGMEVKLTLKDDISRLASIKTYRGIRHRSGHKVR 135

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQR  +N R+       GV +K+
Sbjct: 136 GQRLRSNGRSGATL---GVQKKK 155


>gi|315425850|dbj|BAJ47503.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427708|dbj|BAJ49304.1| small subunit ribosomal protein S13 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 161

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 25/143 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++    R+  AL  + GIG      I     I P  R+  L E ++ +I Q  
Sbjct: 8   IVRVLNTDVDGTLRLPYALARVKGIGVNLGYAIARAAGIDPATRLGNLTEKQIEKIEQIA 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +    DL   +  +I+ +M    ++G+RH  GL V
Sbjct: 68  RNPTRFGIPAWLLNRRFDPVTGEDRHLTGADLELAIKEDIQTMMRTKSWKGIRHSLGLKV 127

Query: 99  RGQRTHTNARTRKKFGKGGVARK 121
           RGQRT T  R        GV+RK
Sbjct: 128 RGQRTRTTGRKGMTV---GVSRK 147


>gi|86279745|gb|ABC94527.1| 30S ribosomal protein S13 [Cryptomonas tetrapyrenoidosa]
          Length = 81

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/81 (48%), Positives = 55/81 (67%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAGV++PR KR+   L YI+GIG  SSQ+I  K  +  + R   L + ++  IR+ I
Sbjct: 1  MARIAGVDLPRNKRIEIGLTYIYGIGLSSSQNILTKAQVNSDIRCKDLTDQDISIIREII 60

Query: 61 EQDYQVEGDLRRTVAMNIKRL 81
          +++YQVEG  RR  ++NIKRL
Sbjct: 61 DKEYQVEGAARRVESLNIKRL 81


>gi|116206296|ref|XP_001228957.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51]
 gi|88183038|gb|EAQ90506.1| hypothetical protein CHGG_02441 [Chaetomium globosum CBS 148.51]
          Length = 115

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V       + +G +++  I  K +I P  ++  L    +  +   +
Sbjct: 1   MVFIFGVNFNEQKLVK----SFYALGPQTADRILAKYSIYPGAKMGTLPPKTLTALTAEL 56

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E D RR +  NIKRL D+G YRG RH  GLPVRGQRT     T +K  K
Sbjct: 57  ST-MNIESDARRVLQDNIKRLRDMGTYRGRRHAMGLPVRGQRTRNQIETARKLNK 110


>gi|327239254|gb|AEA39494.1| ribosomal protein S18 [Ailuropoda melanoleuca]
 gi|327239350|gb|AEA39542.1| ribosomal protein S18 [Ailuropoda melanoleuca]
          Length = 152

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL  
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLGE 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|70992765|ref|XP_751231.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
 gi|66848864|gb|EAL89193.1| ribosomal protein S13p/S18e [Aspergillus fumigatus Af293]
 gi|159130314|gb|EDP55427.1| ribosomal protein S13p/S18e [Aspergillus fumigatus A1163]
          Length = 127

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 25/129 (19%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65
           + AL  I G+G + S  +C K  +   +R  +L   E+ +I   ++   Q          
Sbjct: 1   MYALTQIKGVGRRYSNLVCKKADVDLSKRAGELTTEELERIVTILQNPTQYKIPTWFLNR 60

Query: 66  ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
                       +   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +  
Sbjct: 61  QRDIVDGKDSQVLSNGLDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTV 120

Query: 114 GKGGVARKR 122
              GV++K+
Sbjct: 121 ---GVSKKK 126


>gi|58201997|gb|AAW67052.1| ribosomal protein S13 [Phytophthora infestans]
 gi|58202044|gb|AAW67098.1| ribosomal protein S13 [Phytophthora infestans]
          Length = 137

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 61/107 (57%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I    I  +K ++ +L  ++GI    S+ IC  + I P+  +++L  + V ++   I
Sbjct: 1   MLYIFNKTISDSKSILYSLTVLYGINGFQSKKICKNIGINPQITLNKLKNNHVNRLVNYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
            ++ +VE  L++     +  L+++   RG+R  +GLPVRGQRTHTNA
Sbjct: 61  NKNLKVEQLLKKAKTERLNELVEIKSNRGIRQSQGLPVRGQRTHTNA 107


>gi|161527833|ref|YP_001581659.1| 30S ribosomal protein S13P [Nitrosopumilus maritimus SCM1]
 gi|160339134|gb|ABX12221.1| ribosomal protein S13 [Nitrosopumilus maritimus SCM1]
          Length = 194

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP  ++++  L  I GIG+  +  I + L I     +  L +  V  I + I
Sbjct: 12  IVRIVGNDIPGERKMLVGLTQIKGIGYNFATAILDTLNIDSNSNIGHLTDENVQAIEKLI 71

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  D+  T+  +I+R      +RG RH  GL V
Sbjct: 72  TNPAEGNFPTWFLNRRKDIETGNDLHLLTSDIPFTLRNDIERERVTASWRGYRHLSGLKV 131

Query: 99  RGQRTHTNAR 108
           RGQRT T+ R
Sbjct: 132 RGQRTRTSGR 141


>gi|240281197|gb|EER44700.1| 40S ribosomal protein S13 [Ajellomyces capsulatus H143]
          Length = 101

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I G+N P  + V +AL    GIG  +   +  +  +    ++  L   +V+ +  A+
Sbjct: 1   MVFILGINFPERQLVKQALQSFFGIGPLACNKLMARFYVHETAKIGDLANKQVLSLTAAL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
            +  ++E DLRR +  +I+RL D G  RG RH  GLPVRGQ 
Sbjct: 61  SE-MKIENDLRRQILDDIRRLKDTGTVRGRRHALGLPVRGQN 101


>gi|330845753|ref|XP_003294736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
 gi|325074743|gb|EGC28736.1| 40S ribosomal protein S18 [Dictyostelium purpureum]
          Length = 154

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   ++V+ AL  + G+G + +  +C K  +   +R  +L + EV ++   +
Sbjct: 12  IIRIYNTNVDGRRKVMYALMCVKGVGKRFADLVCKKADVDTSKRAGELSKDEVERLTTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   +      +++RL  +  +RG+RH  GL V
Sbjct: 72  NHPRQYNIPTWFLNRQKDIKDGKYSQCLANQIDVKFREDLERLKKIRAHRGIRHHFGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ+T T  R  +     GVA+KR
Sbjct: 132 RGQKTKTTGRRGRTV---GVAKKR 152


>gi|114606877|ref|XP_001170149.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes]
          Length = 143

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE-------- 52
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E E        
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDENPRQYKIP 71

Query: 53  ---VIQIRQAIEQDY--QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
              + + +   +  Y   +   L   +  +++RL  +  +RGLRH  GL VRGQ T T  
Sbjct: 72  DWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG 131

Query: 108 RTRKKFGKGGVARKR 122
           R  +     GV++K+
Sbjct: 132 RRGRTV---GVSKKK 143


>gi|49147226|ref|YP_025819.1| ribosomal protein S13 [Pseudendoclonium akinetum]
 gi|33439241|gb|AAQ18778.1| ribosomal protein S13 [Pseudendoclonium akinetum]
          Length = 119

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           + G N+   K    AL  I+G+G KS+  +CN + I P+ R+ +L  +++  + ++  + 
Sbjct: 3   LLGSNVSENKAAFFALQAIYGVGQKSAAAVCNLVGINPQTRLRELNSTQLELLTKSCRR- 61

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             +  + +R     IK L+ + CYRG RH   LP RGQRT TNA T K  
Sbjct: 62  -LIASNKKREKVEAIKSLIKISCYRGTRHMNALPCRGQRTRTNAYTSKNL 110


>gi|256084884|ref|XP_002578655.1| 40S ribosomal protein S18 [Schistosoma mansoni]
 gi|238664036|emb|CAZ34893.1| 40S ribosomal protein S18, putative [Schistosoma mansoni]
          Length = 152

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 22/124 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +++ A+  I G+G + +  +C K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVMNTNIDGQLKIMYAITSIKGVGRRYANVVCKKADIDLNKRAGELTEDEVEKLVTVM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      + G L   +  +++RL  +  +RG+RH  GL V
Sbjct: 72  SNPRQYKIPDWFLNRQKDVDDGKHSQLMSGALETKLREDLERLKRIRSHRGIRHYWGLRV 131

Query: 99  RGQR 102
           RGQ 
Sbjct: 132 RGQH 135


>gi|297670462|ref|XP_002813387.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
          Length = 152

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L   EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G  V
Sbjct: 72  QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT T  R  +     GV++K+
Sbjct: 132 RGQRTKTTGRRGRTV---GVSKKK 152


>gi|329765794|ref|ZP_08257360.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137637|gb|EGG41907.1| 30S ribosomal protein S13P [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 192

 Score =  106 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI G +IP A++ +  L  I GIG+  +  I + L I     +  L ES+V  I + I
Sbjct: 9   IVRIVGNDIPGARKAIVGLTQIKGIGYNFATAILDTLKINTNTNIGFLSESDVQSIEKLI 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  D+  T+  +I+R      +RG RH  GL V
Sbjct: 69  TNPIAGNFPPWFLNRRKDIETGSNMHLLTSDIPFTLRNDIERERITNSWRGYRHMYGLKV 128

Query: 99  RGQRTHTNARTRKKFGKGGVAR 120
           RGQ T T  R   K G  GVA+
Sbjct: 129 RGQCTRTTGR---KGGAVGVAK 147


>gi|223994887|ref|XP_002287127.1| RS18, ribosomal protein 18 40S small ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
 gi|220976243|gb|EED94570.1| RS18, ribosomal protein 18 40S small ribosomal subunit
           [Thalassiosira pseudonana CCMP1335]
          Length = 146

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   + VV  L  I G+G + +  IC K  I   +R  +L   E+ ++   I
Sbjct: 14  ILRILNTNVEGKRNVVFGLTKIKGLGRRFADLICKKAEIDVNKRAGELTADEIEKLVAII 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                         +    +  +I+R+  +  +RGLRH  G+ V
Sbjct: 74  QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNFDAKLRDDIERMKKIRAHRGLRHWWGIRV 133

Query: 99  RGQRTHTNAR 108
           RGQ T +  R
Sbjct: 134 RGQHTCSTGR 143


>gi|116754907|ref|YP_844025.1| 30S ribosomal protein S13P [Methanosaeta thermophila PT]
 gi|121694236|sp|A0B9L1|RS13_METTP RecName: Full=30S ribosomal protein S13P
 gi|116666358|gb|ABK15385.1| SSU ribosomal protein S13P [Methanosaeta thermophila PT]
          Length = 159

 Score =  106 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++   K+V  AL  I G+G + ++    K  + P   + +L E ++  ++  I
Sbjct: 15  IVRIYNTDLDGKKQVQMALTGIKGVGRRLARVFAVKAGVDPCATLGKLPEEQIEALKNVI 74

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
           E                       + +  ++  T+  ++  +     Y+G+RH  GL VR
Sbjct: 75  ESVRDNIPAWMMNRRKDIITGVDKHVMGAEVLTTLREDLDIMKKTRSYKGIRHELGLRVR 134

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT +  R+       GV RK+
Sbjct: 135 GQRTRSTGRSGATV---GVTRKK 154


>gi|195610746|gb|ACG27203.1| 40S ribosomal protein S18 [Zea mays]
          Length = 126

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65
           + A+  I G+G + S  +C K  I   +R  +L   E+ ++   +    Q          
Sbjct: 1   MFAMTSIKGVGRRFSNIVCKKADIDMNKRAGELTPDELERLMTVVANPRQFKVPDWFLNR 60

Query: 66  ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
                       V   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K  
Sbjct: 61  KKDYKDGRFSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 120

Query: 114 GKGGVARKR 122
              GV++KR
Sbjct: 121 ---GVSKKR 126


>gi|160550173|gb|ABX44791.1| putative 40S ribosomal protein RPS18 [Flustra foliacea]
          Length = 152

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI     ++ A+  I GIG + +  +  K  I   +R  +L E EV Q+   +
Sbjct: 12  ILRVFNTNIDGNICILHAMTAIKGIGRRYAHAVLRKADIDIRKRAGELAEEEVQQVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
               Q                      +   L   +  +++R+  +  +RGLRH  GL  
Sbjct: 72  SNPRQYKIPDWYLNRQRDIKDGKTSQVIANGLDNKMREDMERMKKIRLHRGLRHYWGLRT 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|289191583|ref|YP_003457524.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22]
 gi|288938033|gb|ADC68788.1| ribosomal protein S13P [Methanocaldococcus sp. FS406-22]
          Length = 150

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV------------- 49
           R++  ++   K+++ AL  I+G+G   ++ +     + P +    L              
Sbjct: 11  RVSRTDLDGNKKLIMALQDIYGVGEAMARAVIRVTKLDPNKLAGYLTEEEVKKIEEVLAD 70

Query: 50  ------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                  S +   R+     E  + +E DL      +I RL  + CYRG+RH  GLP RG
Sbjct: 71  PAKFGIPSWMFNRRKDYVTGEDKHVIESDLMIIKQEDINRLKRIRCYRGIRHELGLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT +  R  +     GV+R++
Sbjct: 131 QRTRSTFRRGQTV---GVSRRK 149


>gi|297712488|ref|XP_002832792.1| PREDICTED: 40S ribosomal protein S18-like [Pongo abelii]
          Length = 152

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L   EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGQRYAHVVLRKADIDLTKRAGELTADEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  G  V
Sbjct: 72  QNPRQCKIPDWFLNRQKDVKDGKYSQVLASGLDNKLREDLERLKKIRAHRGLRHFWGFRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|283795035|ref|YP_003359452.1| ribosomal protein S13 [Synedra acus]
 gi|261279691|gb|ACX61999.1| ribosomal protein S13 [Synedra acus]
          Length = 117

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 2/112 (1%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
            I    +   K +   L  I+GIG K S  IC KL +       Q+ ++ +  +   + +
Sbjct: 2   YILDTKLKDNKIMTIGLTEIYGIGSKISFKICKKLGLSKNITADQVSKNHLSSLDYILNK 61

Query: 63  DYQ--VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           +Y+  V  +L++  +  +++L+ +   RGLR  +GLPVRGQRTHTNA+T KK
Sbjct: 62  EYKLKVSNELKKIESFRLQKLISIKSSRGLRRVKGLPVRGQRTHTNAKTAKK 113


>gi|219128444|ref|XP_002184423.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404224|gb|EEC44172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 146

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   + VV  L  I GIG + S  IC K  +  ++R  +L   E+ ++   I
Sbjct: 14  ILRILNTNVEGKRNVVFGLTKIPGIGRRFSDLICKKAEVDVDKRAGELTADEIEKVVAVI 73

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                         ++   +  +I+RL  +  +RGLRH   + V
Sbjct: 74  QNPRQFKIPLWFLNRQKDFKTGKYSQVFAQNIAAKLRDDIERLKKIRAHRGLRHWWNIRV 133

Query: 99  RGQRTHTNARTR 110
           RGQ T +  R R
Sbjct: 134 RGQHTCSTGRRR 145


>gi|296243122|ref|YP_003650609.1| 30S ribosomal protein S13P [Thermosphaera aggregans DSM 11486]
 gi|296095706|gb|ADG91657.1| SSU ribosomal protein S13P [Thermosphaera aggregans DSM 11486]
          Length = 162

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 22/136 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   +I  +  ++  L  + G+G+  S  I   L + P  R+  L + +V +I   +
Sbjct: 10  IIRVLETDIDGSLPLIYGLAEVKGLGYTFSLAITRILGLDPNTRIGYLSDEDVRKIEALV 69

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + V  +L   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  KNPSSYGLPSWMFNRRKDYASGKDLHLVGAELIYYVKEDIEREKRVRSWRGVRHALGLKV 129

Query: 99  RGQRTHTNARTRKKFG 114
           RGQRT T  R     G
Sbjct: 130 RGQRTRTTGRLGVTVG 145


>gi|303244311|ref|ZP_07330648.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1]
 gi|302485438|gb|EFL48365.1| ribosomal protein S13P [Methanothermococcus okinawensis IH1]
          Length = 168

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-- 60
           RI+  +I     +  AL  I GIG   ++ I     +  +++   L + +V +I + +  
Sbjct: 30  RISKTDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGYLSDEDVQKIEEVLND 89

Query: 61  --------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                               E  + +E DL  TV  +I  +  + CYRG+RH  GLP RG
Sbjct: 90  PAKHGIPSWMFNRKKDTYTGEDKHLIETDLMLTVQEDITTMKKIRCYRGIRHELGLPCRG 149

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + ++    GV R++
Sbjct: 150 QRTR---GSFRRGSIVGVKRRK 168


>gi|71747446|ref|XP_822778.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927]
 gi|71747448|ref|XP_822779.1| 40S ribosomal protein S18 [Trypanosoma brucei TREU927]
 gi|70832446|gb|EAN77950.1| 40S ribosomal protein S18, putative [Trypanosoma brucei]
 gi|70832447|gb|EAN77951.1| 40S ribosomal protein S18, putative [Trypanosoma brucei]
 gi|261332570|emb|CBH15565.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
           DAL972]
 gi|261332571|emb|CBH15566.1| 40S ribosomal protein S18, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 153

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + GIG + +  +C K  +  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGIGIRFAYMVCKKAGVDVERRAGTLSPEELEKISEVI 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPEWFLNRQRDPKTGKTEHLTSSMVDTRLREDLERLRKIRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 133 RGQHTCTSGRRGKTV---GVSRTK 153


>gi|212531371|ref|XP_002145842.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
 gi|210071206|gb|EEA25295.1| ribosomal protein S13p/S18e [Penicillium marneffei ATCC 18224]
          Length = 127

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65
           + AL  I G+G + S  +C K  +   +R   +   E+ +I   I+   Q          
Sbjct: 1   MYALTKIKGVGRRYSNLVCKKADVDLSKRAGDITSEELERIVTIIQNPTQYKIPAWFLNR 60

Query: 66  ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
                       +   +   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +  
Sbjct: 61  QRDITDGKDTQVISNGVDSKLREDLERLKKIRSHRGLRHYWGLRVRGQHTKTTGRRGRTV 120

Query: 114 GKGGVARKR 122
              GV++K+
Sbjct: 121 ---GVSKKK 126


>gi|82952669|ref|XP_893065.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|94395028|ref|XP_001001941.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 186

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 25/141 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   ++  
Sbjct: 49  VLNTNINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNP 108

Query: 64  --------------YQVEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQ 101
                         Y  +G         L   +  +++RL  +  +R L H  GL VRGQ
Sbjct: 109 RQYSIPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQ 168

Query: 102 RTHTNARTRKKFGKGGVARKR 122
            T T  R  +     G+++K+
Sbjct: 169 HTKTTGRRGRTM---GISKKK 186


>gi|119501002|ref|XP_001267258.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181]
 gi|119415423|gb|EAW25361.1| 40S ribosomal protein S13 [Neosartorya fischeri NRRL 181]
          Length = 118

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           +L    G+G   S  +  +  I P  +V +L   +V+ +  A+  D ++E DLRR +  +
Sbjct: 17  SLETFFGVGPLVSARLLARFHIHPTCKVGELANKQVLDLTAALS-DMKIENDLRRQILDD 75

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           IKRL + G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 76  IKRLKESGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 113


>gi|297737051|emb|CBI26252.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 25/129 (19%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------- 65
           + AL  I GIG + +  +C K  +   +R  +L  +E+  +   +    Q          
Sbjct: 1   MFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNR 60

Query: 66  ------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
                       V   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K  
Sbjct: 61  KKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV 120

Query: 114 GKGGVARKR 122
              GV++KR
Sbjct: 121 ---GVSKKR 126


>gi|263173239|gb|ACY69887.1| S18e ribosomal protein [Cimex lectularius]
          Length = 131

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 25/134 (18%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----- 65
             ++V+ A+  I G+G + +  +  K  +  ++R  +  E EV +I   ++   Q     
Sbjct: 1   GKRKVMFAMTAIKGVGRRYANIVLKKADVDLDKRAGECSEEEVEKILTIMQNPRQYKIPD 60

Query: 66  ---------VEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
                    VEG         L   +  +++RL  +  +RG+RH  GL VRGQ T T  R
Sbjct: 61  WFLNRQKDIVEGKYFQLTSASLDAKLRDDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGR 120

Query: 109 TRKKFGKGGVARKR 122
             +     GV++K+
Sbjct: 121 RGRTV---GVSKKK 131


>gi|146103218|ref|XP_001469510.1| 40S ribosomal protein S18 [Leishmania infantum]
 gi|134073880|emb|CAM72619.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
 gi|322503453|emb|CBZ38538.1| unnamed protein product [Leishmania donovani BPK282A1]
 gi|322503454|emb|CBZ38539.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 166

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 26  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 85

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 86  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 145

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV+R +
Sbjct: 146 RGQHTCTTGRHGKTV---GVSRGK 166


>gi|148679456|gb|EDL11403.1| mCG9349 [Mus musculus]
          Length = 143

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 22/132 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L + EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTQDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131

Query: 99  RGQRTHTNARTR 110
           RGQ T T  R  
Sbjct: 132 RGQHTKTTGRRG 143


>gi|296214070|ref|XP_002753551.1| PREDICTED: 40S ribosomal protein S18-like [Callithrix jacchus]
          Length = 152

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++R   +  ++GLRH   L V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDLERQKKIWAHKGLRHFWDLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R        GV++K+
Sbjct: 132 RGQHTKTTGRRGCTV---GVSKKK 152


>gi|303289004|ref|XP_003063790.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
 gi|226454858|gb|EEH52163.1| ribosomal protein S18 [Micromonas pusilla CCMP1545]
          Length = 144

 Score =  104 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+    +V+ AL  I GIG + +  +C K  I   +R  +L  +E+  +   +
Sbjct: 13  ILRVLNTNVDGRTKVMYALTQIRGIGRRFANVVCKKAEIDMGKRAGELSAAELESLMVIV 72

Query: 61  ---------------EQDYQ-------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY+           L   +  +++RL  +  +RGLRH  G+ V
Sbjct: 73  ANPRQFRIPDWFLNRQKDYKDGKYVQLTSNALDTKLRDDLERLKKIRNHRGLRHYWGIRV 132

Query: 99  RGQRTHTNAR 108
           RGQ T T  R
Sbjct: 133 RGQHTKTTGR 142


>gi|213612286|ref|ZP_03370112.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-2068]
          Length = 79

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRRTVAMNIKR 80
           + + VEGDLRR ++M+IKR
Sbjct: 61 AK-FVVEGDLRREISMSIKR 79


>gi|39961431|ref|XP_364684.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15]
 gi|145011032|gb|EDJ95688.1| hypothetical protein MGG_09529 [Magnaporthe oryzae 70-15]
          Length = 119

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL     +G + S  I  K  I P  ++  L    +  +   +
Sbjct: 1   MVLILGVNFHEQKLVRKALESFWNLGPQKSARILAKYCIHPMAKLGTLPPKTITALTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
                +E + ++ V  NI+RL D+G YRG RH   LPVRGQ+T     T +K  +
Sbjct: 61  ST-MNIENEAKKVVLDNIRRLRDMGTYRGRRHAMHLPVRGQQTKNQTETARKLNQ 114


>gi|313126020|ref|YP_004036290.1| SSU ribosomal protein s13p [Halogeometricum borinquense DSM 11551]
 gi|312292385|gb|ADQ66845.1| SSU ribosomal protein S13P [Halogeometricum borinquense DSM 11551]
          Length = 172

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV----------- 49
             RI   ++   K V R+L  + GIG ++++ + +   +        L            
Sbjct: 20  FVRIGQTDLDGTKTVERSLSDMKGIGKRTARIVADAAGVDRTETFGLLDQDDIDAVVDVV 79

Query: 50  -------ESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                     +I  R      E  ++   DL +    +I R+  +  Y+G+RH+RG  VR
Sbjct: 80  ENFNDHAPEWMINRRDDFYTGETTHKTGSDLEQKRRHDINRMKMINSYKGVRHKRGQKVR 139

Query: 100 GQRTHTNARTRKKFG 114
           GQRT +  RT    G
Sbjct: 140 GQRTKSTGRTEGTIG 154


>gi|167527167|ref|XP_001747916.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773665|gb|EDQ87303.1| predicted protein [Monosiga brevicollis MX1]
          Length = 154

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   + ++ A+  I G+G + S     K  I   RR  +L E +V ++   +
Sbjct: 12  ILRVMNTNIAGDRNIMYAMTAIKGVGRRYSNLCLKKAEISTRRRAGELTEDDVRRVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +  DL   +  +++R+  +  +RG+RH  G+ V
Sbjct: 72  QNPRQYKIPDWFLNRKKDIKDGTYSQLLASDLNVKLRDDLERMKKIRLHRGIRHYWGVRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 132 RGQHTKTTGRRGRTV---GVSKKK 152


>gi|1071882|dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
          Length = 90

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 52/90 (57%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          M+ I+G  +   K+V  A   I GIG K +  +C +L I    ++ +L + ++ QI Q I
Sbjct: 1  MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYRLGISDNIKIKELTKYQIDQIEQMI 60

Query: 61 EQDYQVEGDLRRTVAMNIKRLMDLGCYRGL 90
           QD+ V  +L+R    +I+RL+ + CYRG+
Sbjct: 61 GQDHVVHWELKRGERADIERLISISCYRGI 90


>gi|303389678|ref|XP_003073071.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302215|gb|ADM11711.1| 30S ribosomal protein S13P [Encephalitozoon intestinalis ATCC
           50506]
          Length = 153

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   KR+  AL  I G+G + S  IC +L I  +RR  ++ E E+ +I  AI
Sbjct: 13  IVRIHNTNIDGTKRIAFALTKIRGVGIRISTAICKRLGIDLKRRAGEMSEEEMKRISDAI 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   + M I+R       R  R   GL V
Sbjct: 73  LDPASLGIPESYLNHQKDPVDGTTSHLIGTKLDADLRMMIERGKKNKRIRACRLDVGLKV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  K     GV+RK+
Sbjct: 133 RGQRTKSNGRRGKSM---GVSRKK 153


>gi|302023187|ref|ZP_07248398.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68]
          Length = 100

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 45  VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +  L   +   IR+ ++   +VEGDLRR V +NIKRLM++G YRG+RHRRGLPVRGQ T 
Sbjct: 1   MKDLTSDQEDAIRREVDA-IKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTK 59

Query: 105 TNARTRKKFGKGGVARKR 122
            NARTRK        +K+
Sbjct: 60  NNARTRKGEAVAIAGKKK 77


>gi|56754053|gb|AAW25217.1| unknown [Schistosoma japonicum]
          Length = 149

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 25/139 (17%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
             NI    +++ A+  I G+G + +  +  K  I   +R  +L + EV ++   +    Q
Sbjct: 14  NTNIGGQLKIMYAITSIRGVGSRYANVVGKKADIALTKRAGELTDDEVEKLVPVMSNPSQ 73

Query: 66  ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRT 103
                                 +   L   +  +++RL  +  +RG+RH  GL VRGQ T
Sbjct: 74  YKIPDWFLNRQKDVDDGKHSQLMSAALETKLREDLERLKRIRSHRGIRHYWGLRVRGQHT 133

Query: 104 HTNARTRKKFGKGGVARKR 122
            T  R  +     GV+RK+
Sbjct: 134 KTTGRRGRTV---GVSRKK 149


>gi|134058479|emb|CAL00688.1| unnamed protein product [Aspergillus niger]
          Length = 104

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           +++L    GIG  +S  +  +  I P  +V  L   +V+ I  A+  D ++E DLRR   
Sbjct: 1   MKSLESFFGIGNLTSTRLLARFHIHPTCKVGDLANKQVLDITAALS-DMKIENDLRRQYL 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            NIKRL + G YRG RH  GLPVRGQRT +  +T  K  +
Sbjct: 60  DNIKRLKETGTYRGRRHALGLPVRGQRTRSQIKTAVKLNR 99


>gi|149235401|ref|XP_001523579.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|149248956|ref|XP_001528820.1| hypothetical protein LELG_05785 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452988|gb|EDK47244.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146453348|gb|EDK47604.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 122

 Score =  103 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 1   MAR-IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           M R I G  I     V   L   I GIG K +  +  ++ I P  +V+QL E +++++ +
Sbjct: 1   MGRVIFGKFIKGDFTVQIGLAKTIFGIGPKVASQLTARVGIYPRCKVNQLTEQQILELNK 60

Query: 59  AIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            I Q   VEG L++ +  +I+    +    G+RH +G PVRGQ+T TN  T ++  K
Sbjct: 61  EISQ-LTVEGHLKQKINSDIQMKRAINSRAGIRHAQGFPVRGQKTKTNGATARRLNK 116


>gi|321255209|ref|XP_003193346.1| 30s ribosomal protein s13 [Cryptococcus gattii WM276]
 gi|317459816|gb|ADV21559.1| 30s ribosomal protein s13, putative [Cryptococcus gattii WM276]
          Length = 194

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 59/160 (36%), Gaps = 47/160 (29%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
            + G N+P  K +  AL   +GI    S  +  +L I  E  V QL E ++  +   +  
Sbjct: 2   HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQLTALSAYLSS 61

Query: 62  ----------------------------------------------QDYQVEGDLRRTVA 75
                                                          D ++E + RR + 
Sbjct: 62  PSTTARPSEQQLELAPPGGKVLKPVGHPAIFGGLNKGKGKGQEDPLDDLKIETEKRRAMQ 121

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +I  L  +G YRG RH  G PV GQRT TNA+T KK  +
Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKTAKKHNR 161


>gi|150402489|ref|YP_001329783.1| 30S ribosomal protein S13P [Methanococcus maripaludis C7]
 gi|159905737|ref|YP_001549399.1| 30S ribosomal protein S13P [Methanococcus maripaludis C6]
 gi|150033519|gb|ABR65632.1| ribosomal protein S13 [Methanococcus maripaludis C7]
 gi|159887230|gb|ABX02167.1| ribosomal protein S13 [Methanococcus maripaludis C6]
          Length = 149

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CYRG+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYRGVRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + +K    GV RK+
Sbjct: 131 QRTR---GSFRKGTSMGVKRKK 149


>gi|146103213|ref|XP_001469509.1| 40S ribosomal protein S18 [Leishmania infantum]
 gi|134073879|emb|CAM72618.1| putative 40S ribosomal protein S18 [Leishmania infantum JPCM5]
          Length = 153

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLREDLERLKKIRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  K     GV+R +
Sbjct: 133 RGQHTCTTGRHGKTV---GVSRGK 153


>gi|150399381|ref|YP_001323148.1| 30S ribosomal protein S13P [Methanococcus vannielii SB]
 gi|150012084|gb|ABR54536.1| ribosomal protein S13 [Methanococcus vannielii SB]
          Length = 149

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEVKGIGRAMAKALIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL   V  +I  +  + CYRG+RH   LP RG
Sbjct: 71  PAKHGIPSWMFNRKKDVYTGLDKHLIETDLVLAVQEDIGNMKKIRCYRGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT  + R        GV RK+
Sbjct: 131 QRTRGSFRKGSTM---GVKRKK 149


>gi|27658598|ref|XP_226269.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+   +++  A+  I G+G++ +  +  K  I   +R  +L E EV ++   ++ 
Sbjct: 14  RVLDTNVDGQRKIALAITAIKGVGWRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQN 73

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
             Q                      +   L   +  +++R+  +  +RGLRH  GL VRG
Sbjct: 74  PRQYKIPDWFLNRQKDMKDGKYSQVLANSLDNKLREDLERVKKIRAHRGLRHFWGLRVRG 133

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           + T T  R  +     GV++K+
Sbjct: 134 RHTKTTGRRGRTV---GVSKKK 152


>gi|299753190|ref|XP_001833116.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130]
 gi|298410185|gb|EAU88805.2| hypothetical protein CC1G_01178 [Coprinopsis cinerea okayama7#130]
          Length = 185

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 66/181 (36%)

Query: 1   MARIAGVNIPRAKRVV---RALCYIHGIGFKSSQDICNKLAIP----------------- 40
           M  I GV++P          AL   +G+G K++  +C +  I                  
Sbjct: 1   MVHILGVHLPDNYLARNEQYALTKFYGVGQKTAHRLCARFQIHDKCKVKDLSPFQVTSLA 60

Query: 41  --------------------------PERRVHQL----VESE-------VIQIRQAIE-- 61
                                     P   V +L     E++       + +I Q ++  
Sbjct: 61  SFLSSPATAPPLPRYPLASPDYVPPPPNTPVSELQAKFKEAQALIEAKKLAKIEQGVKLG 120

Query: 62  -------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
                  +  ++E +LRR +  NI+    +G Y G RH   LPVRGQ T +NA T KK  
Sbjct: 121 PGYVDPLKKLKIESELRREIRENIQHQRMIGSYVGRRHAMHLPVRGQNTQSNAATAKKLN 180

Query: 115 K 115
           +
Sbjct: 181 R 181


>gi|45358882|ref|NP_988439.1| 30S ribosomal protein S13P [Methanococcus maripaludis S2]
 gi|74553909|sp|Q6LXN1|RS13_METMP RecName: Full=30S ribosomal protein S13P
 gi|45047748|emb|CAF30875.1| SSU ribosomal protein S13 [Methanococcus maripaludis S2]
          Length = 149

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CY+G+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + +K    GV RK+
Sbjct: 131 QRTR---GSFRKGTSMGVKRKK 149


>gi|109083515|ref|XP_001098938.1| PREDICTED: 40S ribosomal protein S18-like isoform 3 [Macaca
           mulatta]
          Length = 152

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    ++  A+  I G+G + +  +  K      +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADTDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDRFLNRQKDVKDGKYSQALANGLDNNLRKDLERLKKIQAHRGLRHFWGLCV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           +GQ T T  R  +     GV+ K+
Sbjct: 132 QGQHTKTTGRRGRTM---GVSEKK 152


>gi|305662631|ref|YP_003858919.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230]
 gi|304377200|gb|ADM27039.1| SSU ribosomal protein S13P [Ignisphaera aggregans DSM 17230]
          Length = 156

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+A  +I     +   L  + GIG+  +  IC  L + P   +  + + E+ +I + +
Sbjct: 8   IVRVAETDIAGELSLSWGLSRVKGIGYNMAIAICRILGLDPSMPIGFITDQEIEKIEELL 67

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + V  +L      +I R + +  +RG+RH  G  V
Sbjct: 68  KNPQKYGIPVWFLNRRKDYETGNDMHLVSSELIYYARQDIDREIRIRSWRGIRHAMGYKV 127

Query: 99  RGQRTHTNAR 108
           RGQRTHT  R
Sbjct: 128 RGQRTHTTGR 137


>gi|326472680|gb|EGD96689.1| 40S ribosomal protein S13 [Trichophyton tonsurans CBS 112818]
          Length = 124

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G + P  + V +AL    GIG      +  +  I P   V +L   +V+ +  A+  + +
Sbjct: 11  GTSFPERQLVSKALRSFFGIGELRCNQLMARFHIHPTSTVGELATRQVLDLTGALS-NMK 69

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +E DL+R +  NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 70  IENDLKREILDNIKRLKTTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 119


>gi|260942527|ref|XP_002615562.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
 gi|238850852|gb|EEQ40316.1| 40S ribosomal protein S18 [Clavispora lusitaniae ATCC 42720]
          Length = 117

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 22/117 (18%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD------------ 63
           + AL  I G+G + S  +C K  +   +R  +L + E+ ++   ++              
Sbjct: 1   MYALTKIRGVGRRYSNLVCKKADVDLNKRAGELTQEELERVVTIMQNPTQYKIPAWFLNR 60

Query: 64  ----------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTR 110
                     + +  +L   +  +++RL  +  +RG+RH  GL VRGQ T T +R R
Sbjct: 61  QKDHVDGKDYHVLANNLESKLRDDLERLKKIRAHRGIRHFWGLKVRGQHTKTTSRGR 117


>gi|268324996|emb|CBH38584.1| 30S ribosomal protein S13P [uncultured archaeon]
          Length = 167

 Score =  101 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 24/143 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             RI   ++   + V  +LC ++GIG + ++ +     I  + ++  L + EV +++ AI
Sbjct: 15  FVRILDTDLDGKRNVADSLCGVNGIGRRIAETLVRSAGIDSKGKMGNLSDDEVERLKTAI 74

Query: 61  E---------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + +  DL      +I  L  +  YRG+RH RGL VR
Sbjct: 75  NSAEKRLPQWMFNRRKDINTGVDKHIMGTDLALKFRDDINLLRKIRSYRGIRHERGLKVR 134

Query: 100 GQRTHTNARTRKKFGKGGVARKR 122
           GQRT    R        GV RK+
Sbjct: 135 GQRTKATGRRGMVV---GVIRKK 154


>gi|19074361|ref|NP_585867.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
 gi|51702028|sp|Q8SRP2|RS18_ENCCU RecName: Full=40S ribosomal protein S18
 gi|19069003|emb|CAD25471.1| 40S RIBOSOMAL PROTEIN S18 [Encephalitozoon cuniculi GB-M1]
          Length = 153

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   NI   KR+  AL  I GIG + +  IC +L I   +R  ++ E E+ +I  AI
Sbjct: 13  IVRIHNTNIDGTKRIPFALTKIRGIGIRIATAICKRLGIDLRKRAGEMGEDEMKRISDAI 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   L   + M I+R       R  R   GL V
Sbjct: 73  LDPASVGIPESYMNHQRDIIDGTTSHLIGTRLDADLRMMIERGKKNKRIRAYRLDVGLKV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R  +     GV+RK+
Sbjct: 133 RGQRTKSNGRRGRSM---GVSRKK 153


>gi|119719177|ref|YP_919672.1| 30S ribosomal protein S13P [Thermofilum pendens Hrk 5]
 gi|158706292|sp|A1RWT9|RS13_THEPD RecName: Full=30S ribosomal protein S13P
 gi|119524297|gb|ABL77669.1| SSU ribosomal protein S13P [Thermofilum pendens Hrk 5]
          Length = 157

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 22/120 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+AGV++P  K +V AL  I GIG  ++Q +  KL + P R +  L E EV ++  A+
Sbjct: 8   IVRVAGVDLPGDKALVYALADIKGIGVSTAQAVAKKLGLDPYRLLGTLSEEEVEKLSAAL 67

Query: 61  EQ----------------------DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
            +                       + +  DL  TV  +I+ +  +  Y+G+RH  GL V
Sbjct: 68  REIEKLGLPPWMLNRRKDPFLGVDRHLITSDLLITVRNDIEFMKKIKSYKGVRHMLGLKV 127


>gi|257076680|ref|ZP_05571041.1| 30S ribosomal protein S13P [Ferroplasma acidarmanus fer1]
          Length = 159

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  +I   +R+   L  I+G+G + +  +  KL +   R++  L E EV++IR+ +
Sbjct: 14  IVRIANKDIRGERRMDLGLADINGVGERLANILIKKLNLDRNRQIGDLSEDEVLEIRKYV 73

Query: 61  E----------------------QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           E                          +  DL   +  +I  +  +  YRGLRH +G  V
Sbjct: 74  ESKEYEGMPVWLLNHRKDVATGKNFNLLSNDLILKINDDINLMKKMRSYRGLRHEQGHKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV RKR
Sbjct: 134 RGQRTRSNGRHGLSM---GVIRKR 154


>gi|302908932|ref|XP_003049961.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730898|gb|EEU44248.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 119

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M  I GVN    K V +AL   + +G  +S  I  K +I    +V  L    V  +   +
Sbjct: 1   MVFILGVNFGEQKLVKKALESFYALGPTTSARIMAKYSIHKLAKVGSLAPRTVTSLTAEL 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            Q   +E D RR V  NI+RL D+G YRG RH  GLPVRG
Sbjct: 61  SQ-MTIETDARRQVQENIRRLKDMGSYRGRRHAMGLPVRG 99


>gi|255950082|ref|XP_002565808.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592825|emb|CAP99193.1| Pc22g19050 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 114

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
             GIG  SS  + ++  I P  RV +L   +V+ +   + +  ++E DLRR V  +IKR+
Sbjct: 12  FFGIGNNSSARLMSRFNIHPTCRVGELANKQVLDLTAVLSE-MKIENDLRREVLNDIKRM 70

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHT 105
            + G YRG RH  GLPVRGQRT T
Sbjct: 71  KETGTYRGRRHALGLPVRGQRTRT 94


>gi|297618742|ref|YP_003706847.1| ribosomal protein S13P [Methanococcus voltae A3]
 gi|297377719|gb|ADI35874.1| ribosomal protein S13P [Methanococcus voltae A3]
          Length = 149

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  I GIG   ++ I     + P+ +   + + EV +I   +E 
Sbjct: 11  RISKTDLKGESPLEYALQEIKGIGRAMARAIIRLTELDPKVQAGYIGDEEVAKIESVLED 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  L CYRG+RH   LP RG
Sbjct: 71  PAKHGIPSWMFNRKKDVYSGLDKHLIETDLTMTVQEDITTMKKLRCYRGIRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + +K    GV R++
Sbjct: 131 QRTR---GSFRKGSSMGVKRRK 149


>gi|149940233|emb|CAM32184.1| ribosomal protein S18 [Sparus aurata]
          Length = 132

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 25/135 (18%)

Query: 10  PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---- 65
              +++  A+  I G+G + +  +  K  I   +R  +L + EV +    ++   Q    
Sbjct: 1   DGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTDEEVERAVTIMQNPRQYKIP 60

Query: 66  ------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
                             +   L   +  +++RL  +  +RGLRH  GL VRGQ T T  
Sbjct: 61  DWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTG 120

Query: 108 RTRKKFGKGGVARKR 122
           R  +     GV++K+
Sbjct: 121 RRGRTV---GVSKKK 132


>gi|150401524|ref|YP_001325290.1| 30S ribosomal protein S13P [Methanococcus aeolicus Nankai-3]
 gi|150014227|gb|ABR56678.1| ribosomal protein S13 [Methanococcus aeolicus Nankai-3]
          Length = 149

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R++  +I     +  AL  I GIG   ++ I     +  +++   + + +V +I   + +
Sbjct: 11  RVSRTDITGEFPLEYALQDIKGIGKAMAKAILRITKLDGKQQAGLMSDEDVKKIEDILNE 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL   V  +I  +  + CYRG+RH  GLP RG
Sbjct: 71  PAKHGIPSWMFNRKNDVYSGLNKHLIESDLTMAVQEDIATMKKIRCYRGIRHELGLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + +K    GV R++
Sbjct: 131 QRTR---GSFRKGSLVGVKRRK 149


>gi|157876642|ref|XP_001686666.1| 40S ribosomal protein S18 [Leishmania major strain Friedlin]
 gi|68129741|emb|CAJ09047.1| putative 40S ribosomal protein S18 [Leishmania major strain
           Friedlin]
          Length = 153

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153


>gi|311261966|ref|XP_003128953.1| PREDICTED: 40S ribosomal protein S18-like [Sus scrofa]
          Length = 200

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 25/143 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+    I   +++  A   I G+G + +  +  K  I   +R  +L E EV  +   +
Sbjct: 60  ILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIM 119

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 120 QNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRV 179

Query: 99  RGQRTHTNARTRKKFGKGGVARK 121
            GQ T T  R         V++K
Sbjct: 180 GGQHTKTTGRRGHTVR---VSKK 199


>gi|58261282|ref|XP_568051.1| 30s ribosomal protein s13 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134115685|ref|XP_773556.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256182|gb|EAL18909.1| hypothetical protein CNBI1700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230133|gb|AAW46534.1| 30s ribosomal protein s13, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 194

 Score =  100 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 59/160 (36%), Gaps = 47/160 (29%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
            + G N+P  K +  AL   +GI    S  +  +L I  E  V QL E +V  +   +  
Sbjct: 2   HLLGHNLPDHKPLKIALLTFYGISHALSARLLPRLGIHSEATVAQLTEPQVTALSAYLSS 61

Query: 62  ----------------------------------------------QDYQVEGDLRRTVA 75
                                                          D ++E + RR + 
Sbjct: 62  PSTTARPSEQQIELAPPGGKVLKPVGHPAIFGELNKGKGKGQEDPLDDLKIETEKRRAMQ 121

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +I  L  +G YRG RH  G PV GQRT TNA++ KK  +
Sbjct: 122 ADIAHLRMVGTYRGRRHAAGYPVHGQRTQTNAKSAKKHNR 161


>gi|322490674|emb|CBZ25936.1| putative 40S ribosomal protein S18 [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322490675|emb|CBZ25937.1| putative 40S ribosomal protein S18 [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 153

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVAFALRMVKGVGIRFAYLVCKKAGIDVERRAGTLTAEELEKIAEII 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153


>gi|15922391|ref|NP_378060.1| 30S ribosomal protein S13P [Sulfolobus tokodaii str. 7]
 gi|32363379|sp|Q96YV7|RS13_SULTO RecName: Full=30S ribosomal protein S13P
 gi|15623180|dbj|BAB67169.1| 172aa long hypothetical 30S ribosomal protein S13 [Sulfolobus
           tokodaii str. 7]
          Length = 172

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 22/123 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    +V  AL  + GIG+ +++ I  KL +  +RR+ +L + ++ +I   +
Sbjct: 10  IVRLFGQDVDGTMKVPYALAMVKGIGYNTARAIVFKLGLDKDRRLGELSDEDIKKIENYL 69

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 70  TDKKILEVPNWMYNRRKDYESGIDMHLVTSDLIFYVRNDIEREKKIKSWRGVRHSLGLKV 129

Query: 99  RGQ 101
           RGQ
Sbjct: 130 RGQ 132


>gi|27671346|ref|XP_234780.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|109482109|ref|XP_001058023.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 152

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    ++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH   L V
Sbjct: 72  QNPRQYKIPDWFLDRQKDVKDGKYSQVLAKGLDNKLHEDLERLKKIRAHRGLRHFWDLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
            GQ + T  R        GV++K+
Sbjct: 132 GGQHSKTTGRRGHTV---GVSKKK 152


>gi|114669049|ref|XP_511822.2| PREDICTED: similar to ribosomal protein [Pan troglodytes]
          Length = 152

 Score =   99 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    ++  A+  I G+G + +  +  K  I   +R  +L+E EV ++   +
Sbjct: 12  ILRVLNTNIDGRWKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELIEDEVERVVTIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGL H  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYNQVLANGLDNELREDLERLKKIRAHRGLSHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RG+ T T     +      V++K+
Sbjct: 132 RGRHTKTTGCRGRTVS---VSKKK 152


>gi|238491704|ref|XP_002377089.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357]
 gi|220697502|gb|EED53843.1| 30S/40S ribosomal protein, putative [Aspergillus flavus NRRL3357]
          Length = 107

 Score = 99.6 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           +++L    GIG   S  +  +  I P  +V +L   +V+ I  A+ +  ++E DLRR   
Sbjct: 1   MKSLQSFFGIGNNGSSRLLARFHIHPTCKVGELANKQVLDITAALSE-MKIENDLRRQYL 59

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
            +IKRL + G YRG RH  GLPVRGQRT T
Sbjct: 60  DDIKRLKETGTYRGRRHALGLPVRGQRTRT 89


>gi|134045319|ref|YP_001096805.1| 30S ribosomal protein S13P [Methanococcus maripaludis C5]
 gi|132662944|gb|ABO34590.1| SSU ribosomal protein S13P [Methanococcus maripaludis C5]
          Length = 149

 Score = 99.2 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI+  ++     +  AL  + GIG   ++ +     + P+++   L + +V++I   +E 
Sbjct: 11  RISKTDLEGKNPLEYALQEMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLED 70

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +E DL  TV  +I  +  + CY+G+RH   LP RG
Sbjct: 71  PATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGVRHELRLPCRG 130

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           QRT     + +K    GV R++
Sbjct: 131 QRTR---GSFRKGTSMGVKRRK 149


>gi|207092547|ref|ZP_03240334.1| 30S ribosomal protein S13 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 76

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/76 (59%), Positives = 55/76 (72%)

Query: 45  VHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
           +H+L E EV  I + I+Q Y VEGDLR+ V M+IK LMDLG YRG+RHR+GLPVRGQ T 
Sbjct: 1   MHELSEDEVSSIAKKIQQSYLVEGDLRKKVQMDIKSLMDLGNYRGIRHRKGLPVRGQTTK 60

Query: 105 TNARTRKKFGKGGVAR 120
            NARTRK   K   ++
Sbjct: 61  NNARTRKGKKKTVGSK 76


>gi|109126207|ref|XP_001091975.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Macaca
           mulatta]
          Length = 149

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 28/144 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   ++   A+  I G+G + +  +  K  I   +R  +L E EV ++    
Sbjct: 12  ILRVLNTNIDGRRKTAFAITAIKGVGGRYAHAVLRKADIDLTKRAGELTEEEVERVITLT 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +   RGL H  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAPRGLCHFWGLRV 131

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T   T       GV++K+
Sbjct: 132 RGQHTKTTGLT------VGVSKKK 149


>gi|123492382|ref|XP_001326044.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|121908953|gb|EAY13821.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
          Length = 155

 Score = 98.8 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   + +  AL  I GIG + +  +  +  + P RR   L   E   I   I
Sbjct: 14  MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + V  DL   +   I+R+  +   RG+RH  GL V
Sbjct: 74  QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLSANIRAEIERMKKMRMKRGIRHGLGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T +  R     G  GV RK+
Sbjct: 134 RGQCTKSTGRRG---GALGVERKK 154


>gi|322827919|gb|EFZ31897.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
          Length = 154

 Score = 98.4 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 14  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL     +RG+RH  GL V
Sbjct: 74  ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 134 RGQHTCTSGRHGKTV---GVSRTK 154


>gi|164658281|ref|XP_001730266.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966]
 gi|159104161|gb|EDP43052.1| hypothetical protein MGL_2648 [Malassezia globosa CBS 7966]
          Length = 154

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 22/124 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   +++  AL  I G+G + +  +C K  I   +R  +L   E+ +I   +
Sbjct: 15  ILRLLNTNVDGKRKIQYALTEIKGVGRRYANIVCKKADIDLTKRAGELNSDELERIVNIL 74

Query: 61  ---------------EQDYQVEGD-------LRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++D+    D       +   +  +++RL  +  +RGLRH   L  
Sbjct: 75  QSPQEFKIPTWFLNRQKDFTTGKDAQVLSNNVEAKLRDDLERLKKIRAHRGLRHYWELRA 134

Query: 99  RGQR 102
           RGQ 
Sbjct: 135 RGQH 138


>gi|71666149|ref|XP_820037.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
 gi|71666187|ref|XP_820056.1| 40S ribosomal protein S18 [Trypanosoma cruzi strain CL Brener]
 gi|70885364|gb|EAN98186.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
 gi|70885383|gb|EAN98205.1| 40S ribosomal protein S18, putative [Trypanosoma cruzi]
          Length = 153

 Score = 98.4 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ +I + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYMVCKKAGIDVERRAGTLTAEELERISEVI 72

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    +     +   +  +++RL     +RG+RH  GL V
Sbjct: 73  ADPAKFKIPDWFLNRQRDPKTGKTEHLTSAMVDTRLREDLERLRKNRVHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 133 RGQHTCTSGRHGKTV---GVSRTK 153


>gi|154345580|ref|XP_001568727.1| 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|154345582|ref|XP_001568728.1| 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066069|emb|CAM43857.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066070|emb|CAM43858.1| putative 40S ribosomal protein S18 [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 153

 Score = 98.0 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  AL  + G+G + +  +C K  I  ERR   L   E+ ++ + I
Sbjct: 13  IVRLLNTNVEGKRKVPFALRMVKGVGIRFAYLVCKKTGIDVERRAGTLTAEELEKVAEVI 72

Query: 61  ----------------------EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                 + ++     +   +  +++RL  +  +RG+RH  GL V
Sbjct: 73  VDPARFKIPDWFLNRQRDPKTGKTEHLSSSMVDTRLRDDLERLKKMRAHRGVRHAYGLRV 132

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T+ R  K     GV+R +
Sbjct: 133 RGQHTCTSGRHGKTV---GVSRGK 153


>gi|94395371|ref|XP_909279.2| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|309269954|ref|XP_003084985.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 166

 Score = 98.0 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 25/141 (17%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI   +++  A+  I G+G + +  +  K  I    R  +L E EV ++   ++  
Sbjct: 29  VLNTNIYGLRKIAFAITAIKGVGRRYAHLVLRKADIDLTERAGELTEDEVERVITIMQNP 88

Query: 64  YQV--------------EGDLRRTVA--------MNIKRLMDLGCYRGLRHRRGLPVRGQ 101
            Q               +G   + +A         + +RL  +  +R LRH  GL VRGQ
Sbjct: 89  RQYNIPDWFLNRQKDVKDGKCSQILANGPDNKLPEDPERLKKIRDHRELRHFWGLRVRGQ 148

Query: 102 RTHTNARTRKKFGKGGVARKR 122
            T T  R  +     GV++K+
Sbjct: 149 HTKTTGRRGRTM---GVSKKK 166


>gi|226292588|gb|EEH48008.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb18]
          Length = 157

 Score = 97.6 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
           ++AL    GIG  +   +  +  +    ++  L   +++ +  A+ +  ++E DLRR + 
Sbjct: 48  MKALQSFFGIGPLTCSKVMARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQIL 106

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +I+RL D+G  RG RH  GLPVRGQRT +  +T  K  +
Sbjct: 107 DDIQRLKDIGTVRGRRHALGLPVRGQRTRSQNKTAIKLNR 146


>gi|167042197|gb|ABZ06929.1| putative ribosomal protein S13/S18 [uncultured marine crenarchaeote
           HF4000_ANIW93I24]
          Length = 180

 Score = 97.6 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 25/128 (19%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD----------- 63
           +V  L  I G+G+  +  I N L I P +R+  L   +V  I   I+             
Sbjct: 1   MVVGLTKIRGVGYMFANTIINVLKINPNQRIGYLSPEQVKSIESIIKNPSASNFPSWFLN 60

Query: 64  -----------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
                      + +  D+  TV  +I+R    G +RG+RH  GL VRGQRT    R   K
Sbjct: 61  RRKDIETGEDKHLITSDIAFTVRNDIEREKTSGSWRGIRHMFGLKVRGQRTRCTGR---K 117

Query: 113 FGKGGVAR 120
            G   VA+
Sbjct: 118 GGAVSVAK 125


>gi|123367594|ref|XP_001297089.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123448087|ref|XP_001312777.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123453508|ref|XP_001314734.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123475112|ref|XP_001320735.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123479230|ref|XP_001322774.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123482954|ref|XP_001323914.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|123503102|ref|XP_001328438.1| ribosomal protein S13p/S18e [Trichomonas vaginalis G3]
 gi|121877055|gb|EAX84159.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121894636|gb|EAX99847.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121897372|gb|EAY02495.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121903547|gb|EAY08512.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121905626|gb|EAY10551.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121906788|gb|EAY11691.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
 gi|121911381|gb|EAY16215.1| ribosomal protein S13p/S18e, putative [Trichomonas vaginalis G3]
          Length = 155

 Score = 96.9 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M R+   N+   + +  AL  I GIG + +  +  +  + P RR   L   E   I   I
Sbjct: 14  MVRMLSTNVDGRRPLYLALTNISGIGRRFAYAVVRRAGLDPLRRAGTLTPKEEELIVSII 73

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +                        + V  DL   +   I+R+  +   RG+RH  GL V
Sbjct: 74  QNPTEHQIPVWMLNRRFDRATGQNTHWVATDLGANIRAEIERMKKMRMKRGIRHGLGLKV 133

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T +  R     G  GV RK+
Sbjct: 134 RGQCTKSTGRRG---GALGVERKK 154


>gi|300708772|ref|XP_002996559.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
 gi|239605870|gb|EEQ82888.1| hypothetical protein NCER_100337 [Nosema ceranae BRL01]
          Length = 161

 Score = 96.9 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   KRVV ALC I GIG + +  IC +  +   RR   L + E+ +I+ AI
Sbjct: 21  IIRIFNTNVDGTKRVVHALCAITGIGKRMATAICKRTGVDVLRRAGDLNQDELEKIQNAI 80

Query: 61  EQDYQVE----------------GDLRRTVAMNIKRLMDLGCYRGLRHRR------GLPV 98
                V                      +  M+ +  M L   + +RH R      GL V
Sbjct: 81  NDPSSVGIPYSFYNYKKNPVDGTNTHLVSTRMDAEYRMMLEKGKKIRHVRLCRVACGLKV 140

Query: 99  RGQRTHTNAR 108
            GQR+ +N R
Sbjct: 141 HGQRSKSNGR 150


>gi|239811649|gb|ACS27136.1| ribosomal protein S13 [Heterosigma akashiwo]
 gi|239811689|gb|ACS27175.1| ribosomal protein S13 [Heterosigma akashiwo]
          Length = 126

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61
            +   NI   + +   L  ++G+       +C +L +    +   + +S++  I + + E
Sbjct: 2   FLLRTNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDE 61

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           ++  ++ DL++ V  N K+L+ +  YRG RH+ GLP RGQRTHTNART++K       +K
Sbjct: 62  KNVLIKDDLQKFVLDNKKQLIAIKTYRGSRHKEGLPTRGQRTHTNARTQRKLTSFKSKKK 121


>gi|213646546|ref|ZP_03376599.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
          Length = 71

 Score = 96.9 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQDYQVEGDLRR 72
           + + VEGDLRR
Sbjct: 61 AK-FVVEGDLRR 71


>gi|91228970|ref|ZP_01262865.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01]
 gi|91187490|gb|EAS73827.1| 30S ribosomal protein S13 [Vibrio alginolyticus 12G01]
          Length = 71

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+GIG   SQ I  ++ I    ++ +L E ++ Q+R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTAIYGIGKTRSQAILAEVGIAENVKISELTEEQIDQLRDGV 60

Query: 61 EQDYQVEGDLRR 72
           + Y VEGDLRR
Sbjct: 61 AK-YTVEGDLRR 71


>gi|288871945|dbj|BAI70631.1| ribosomal protein S13 [Heterosigma akashiwo]
          Length = 126

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61
            +   NI   + +   L  ++G+       +C +L +    +   + +S++  I + + E
Sbjct: 2   FLLRTNINPNQNIQSGLKRVYGLNNALILQLCRELGLNTALKFKDVKKSQLGLITKWVDE 61

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
           ++  ++ DL++ V  N K+L+ +  YRG RH+ GLP RGQRTHTNART++K       +K
Sbjct: 62  KNVLIKDDLQKFVLDNKKQLIGIKTYRGSRHKEGLPTRGQRTHTNARTQRKLTSFKSKKK 121


>gi|7861934|gb|AAF70446.1|AF210641_1 Ke3 [Danio rerio]
          Length = 126

 Score = 96.5 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 22/125 (17%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ------ 65
            +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   ++   Q      
Sbjct: 1   RRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDW 60

Query: 66  ----------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
                           +   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R 
Sbjct: 61  FLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRR 120

Query: 110 RKKFG 114
            +  G
Sbjct: 121 GRTVG 125


>gi|296805123|ref|XP_002843386.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480]
 gi|238844688|gb|EEQ34350.1| 40S ribosomal protein S13 [Arthroderma otae CBS 113480]
          Length = 118

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
            + + +AL    GIG      +  +  I P   V +L   +V+ +  A+  + ++E DL+
Sbjct: 11  RQTIQKALRSFFGIGELRCNQLMARFHIHPTATVGELATRQVLDLTGALS-NMKIENDLK 69

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           R +  NIKRL D G YRG RH   LPVRGQ T +  ++  KF +
Sbjct: 70  REILDNIKRLKDTGTYRGRRHALNLPVRGQNTRSQIKSAIKFNR 113


>gi|329907621|ref|ZP_08274691.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546926|gb|EGF31835.1| 30S ribosomal subunit protein S13 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 69

 Score = 95.7 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 53  VIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + ++R  I + + VEGDLRR V+MNIKRLMDLGCYRGLRHR+GLP RGQRT TNARTRK 
Sbjct: 1   MEKLRDEIAK-FVVEGDLRREVSMNIKRLMDLGCYRGLRHRKGLPCRGQRTRTNARTRKG 59

Query: 113 FGKGGVARKR 122
             K   + K+
Sbjct: 60  PRKAAQSLKK 69


>gi|289065187|ref|YP_003434239.1| ribosomal protein S13 [Chattonella marina]
 gi|288871899|dbj|BAI70586.1| ribosomal protein S13 [Chattonella marina]
          Length = 138

 Score = 95.0 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 1/112 (0%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-E 61
            +   NIP   ++   L  I+G        +C ++ + P      L +S++  + + + E
Sbjct: 2   FLLKTNIPLTNKLRTGLKKIYGFNDFFIYKMCKEIGLNPSLSFKNLKKSQIGLLLKWVNE 61

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
            +  +  +L++    N  RL+ +  YRGLRH+ GLP RGQRTHTN +T+++ 
Sbjct: 62  NNLLINDELKKNQLDNKNRLITIKSYRGLRHKNGLPTRGQRTHTNRKTQRRL 113


>gi|112799401|gb|ABI23025.1| SSU ribosomal protein S13AB [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
 gi|255513949|gb|EET90214.1| ribosomal protein S13 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 177

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 29/147 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQI 56
           + RIA  +I     + RAL  + GIG   S      I +K  I P   +  L ES+V Q+
Sbjct: 19  IVRIANKDINGGLNIQRALDQVKGIGQTMSHSLSYVIEHKFNIDPSTPIGSLNESQVTQV 78

Query: 57  RQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
            + I+  ++                      +  DL   V  +I R + L  +RG RH+ 
Sbjct: 79  EELIKDPHKYGVPKYLLNRRNDMDTGKDMHLIGNDLIFAVRQSINRDVTLRVWRGYRHQY 138

Query: 95  GLPVRGQRTHTNARTRKKFGKGGVARK 121
           G  VRGQ T +  RT       GV +K
Sbjct: 139 GQKVRGQHTRSTGRTGATV---GVTKK 162


>gi|163752124|ref|ZP_02159329.1| 30S ribosomal protein S13 [Shewanella benthica KT99]
 gi|161327959|gb|EDP99134.1| 30S ribosomal protein S13 [Shewanella benthica KT99]
          Length = 71

 Score = 94.6 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 1/69 (1%)

Query: 49  VESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR 108
            E+++  +R+A+ + Y VEGDLRR V+MNIKRLMDLGCYRG+RHRR LP+RGQRT TNAR
Sbjct: 2   SEAQIDILREAVAE-YTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQRTKTNAR 60

Query: 109 TRKKFGKGG 117
           TRK   K  
Sbjct: 61  TRKGPRKPI 69


>gi|315045402|ref|XP_003172076.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893]
 gi|311342462|gb|EFR01665.1| hypothetical protein MGYG_04667 [Arthroderma gypseum CBS 118893]
          Length = 118

 Score = 92.6 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV 74
           + +AL    GIG      +  +  I P   V +L   +V+ +  A+  + ++E DL+R +
Sbjct: 14  LQKALRSFFGIGELRCSQLMARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREI 72

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
             NIKRL   G YRG RH   LPVRGQ T +  +   KF +
Sbjct: 73  LDNIKRLKSTGTYRGRRHALNLPVRGQNTRSQIKNAIKFNR 113


>gi|253745946|gb|EET01539.1| Ribosomal protein S18 [Giardia intestinalis ATCC 50581]
          Length = 154

 Score = 92.6 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   NI     +  AL  I GIG + +     K  I   +R  +L  +E   + + +E 
Sbjct: 15  RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74

Query: 62  --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100
                          D++   D+   V        M+++RL    C RG+RH   L VRG
Sbjct: 75  PLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRMDLERLRKTRCERGVRHHHNLKVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T +  R        GV RK+
Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153


>gi|126309823|ref|XP_001377507.1| PREDICTED: similar to ribosomal protein [Monodelphis domestica]
          Length = 184

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 26/144 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 45  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 104

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL D   +R       L V
Sbjct: 105 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLRD-SAHRASTLWGDLRV 163

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQ T T  R  +     GV++K+
Sbjct: 164 RGQHTKTTGRRGRTV---GVSKKK 184


>gi|148709378|gb|EDL41324.1| mCG121998 [Mus musculus]
          Length = 134

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 25/137 (18%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD---- 63
           NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   ++      
Sbjct: 1   NINGLRKIAFAITAIKGVGQRYAHLVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYS 60

Query: 64  ----------YQVEGD--------LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
                     Y  +G         L   +  +++RL  +  +R L H  GL VRGQ T T
Sbjct: 61  IPDWFLNRQKYVKDGKCSQVLAKGLDNKLPEDLERLKKIRAHRRLHHFWGLRVRGQHTKT 120

Query: 106 NARTRKKFGKGGVARKR 122
             R  +     G+++K+
Sbjct: 121 TGRRGRTM---GISKKK 134


>gi|316976096|gb|EFV59439.1| 40S ribosomal protein S18 [Trichinella spiralis]
          Length = 207

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 22/117 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI    +V  AL  I G+G + S  +C K  I   +R  +L   E  ++   +
Sbjct: 64  ILRVMNTNIDGNAKVPYALTAIKGVGRRFSHAVCRKADISIHKRAGELTAEETDKLINVM 123

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
               Q                      +   L   +  +++RL  +  +RGLRH  G
Sbjct: 124 TNPKQYKIPDWFLNRRRDIKDGTTTQVLSTILDSKLREDLERLKKIRAHRGLRHYWG 180


>gi|262192754|gb|ACY30447.1| RPS18.A-like protein [Liriodendron tulipifera]
          Length = 197

 Score = 92.3 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 55/147 (37%), Gaps = 34/147 (23%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR----VHQLVESEVIQI 56
           + R+   N+   ++++ AL  I GIG + +  +C        RR      +L  +E+  +
Sbjct: 60  ILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCK-----GRRRHEQEAGELSAAELENL 114

Query: 57  RQAIEQDY---------------------QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
              +                          V   L   +  +     D   +RGLRH  G
Sbjct: 115 MVIVANPDSSRFQTGFEQEEGLQGWRYSQVVSNALDMKLRDDWTTEED-QDHRGLRHYWG 173

Query: 96  LPVRGQRTHTNARTRKKFGKGGVARKR 122
           L VRGQ T T  R  K     GV++KR
Sbjct: 174 LRVRGQHTKTTGRRGKTV---GVSKKR 197


>gi|308163385|gb|EFO65727.1| Ribosomal protein S18 [Giardia lamblia P15]
          Length = 154

 Score = 91.9 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   NI     +  AL  I GIG + +     K  I   +R  +L  +E   + + +E 
Sbjct: 15  RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74

Query: 62  --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100
                          D++   D+   V         +++RL    C RG+RH   L VRG
Sbjct: 75  PLSHGIPPWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T +  R        GV RK+
Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153


>gi|200004021|ref|YP_002221356.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328]
 gi|198385445|gb|ACH86039.1| ribosomal protein S13 [Blastocystis sp. DMP/02-328]
          Length = 116

 Score = 91.9 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 44/96 (45%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           L  I+GI    ++ I + L   P  ++  L  + +      + + Y +  DL      N 
Sbjct: 19  LNKIYGINTMQAKYILHSLGYNPSMKIKNLTPTNLKSFNMFLTKYYLINNDLHYQFENNK 78

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           K+ + L  Y G+R +  LP  GQ TH+NA T KK  
Sbjct: 79  KQKILLNTYHGVRLKTKLPSHGQNTHSNAHTAKKLN 114


>gi|110225694|ref|YP_665699.1| ribosomal protein S13 [Mesostigma viride]
 gi|17222565|gb|AAL36738.1|AF353999_18 ribosomal protein S13 [Mesostigma viride]
          Length = 116

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 13  KRVVRALCYIHGIGFKSSQDICNKLAIP----PERRVHQLVESEVIQIRQAIEQDYQVEG 68
           K +   L  + G+G K+S  IC  + +     P+     +++S   ++  ++     +  
Sbjct: 13  KPIPILLQKVFGLGKKNSIQICRSMGLHERMSPKMSSKFILDSLQERLETSLGNS--LGA 70

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            L   + +N +RL+ +  YRG RH RGLP RGQRT TNART +K
Sbjct: 71  PLINRIHLNKERLIKISSYRGFRHHRGLPARGQRTRTNARTCRK 114


>gi|213028320|ref|ZP_03342767.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 62

 Score = 91.5 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          MARIAG+NIP  K  V AL  I+G+G   S+ I     I    ++ +L E ++  +R  +
Sbjct: 1  MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEV 60

Query: 61 EQ 62
           +
Sbjct: 61 AK 62


>gi|159107620|ref|XP_001704088.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803]
 gi|157432138|gb|EDO76414.1| Ribosomal protein S18 [Giardia lamblia ATCC 50803]
          Length = 154

 Score = 91.5 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 25/142 (17%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE- 61
           R+   NI     +  AL  I GIG + +     K  I   +R  +L  +E   + + +E 
Sbjct: 15  RMFNTNIQGKVVLECALVGIKGIGRRFANVALKKANIDVHKRAGELTAAEEDALMKVLED 74

Query: 62  --------------QDYQVEGDLRRTV-------AMNIKRLMDLGCYRGLRHRRGLPVRG 100
                          D++   D+   V         +++RL    C RG+RH   L VRG
Sbjct: 75  PLSHGIPAWMLNRNNDFESGKDMHILVNTIASTHRADLERLRKTRCERGVRHHHNLKVRG 134

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T +  R        GV RK+
Sbjct: 135 QHTKSTGRRGHVV---GVQRKK 153


>gi|200004049|ref|YP_002221383.1| ribosomal protein S13 [Blastocystis sp. NandII]
 gi|198385471|gb|ACH86064.1| ribosomal protein S13 [Blastocystis sp. NandII]
          Length = 115

 Score = 91.1 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA-IEQDYQVEGDLRRTVAMN 77
           L  I+GI  + ++ I   L I     V+ L +  + QI +  I+++Y +  DL+     N
Sbjct: 19  LNKIYGINTEQAKYILKNLGINTNISVNDLTQPLLKQINEFLIKKNYIINKDLQYKTNNN 78

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           IK    +  Y+G R +  LP  GQ TH+N +T KK
Sbjct: 79  IKFKSLINTYKGFRLKNKLPCHGQNTHSNGKTAKK 113


>gi|269862378|ref|XP_002650814.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|269862740|ref|XP_002650957.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|269864585|ref|XP_002651624.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220064177|gb|EED42431.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220065356|gb|EED43099.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220065576|gb|EED43243.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
          Length = 161

 Score = 90.7 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 22/130 (16%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   K++V AL  I G+G + ++    +  + P +   +L   E+  I+  I
Sbjct: 21  IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           ++                       + V   L   + M I++       RG R   GL  
Sbjct: 81  DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMGLKC 140

Query: 99  RGQRTHTNAR 108
            GQRT +N R
Sbjct: 141 NGQRTRSNGR 150


>gi|298253054|ref|ZP_06976846.1| ribosomal protein S13 [Gardnerella vaginalis 5-1]
 gi|297532449|gb|EFH71335.1| ribosomal protein S13 [Gardnerella vaginalis 5-1]
          Length = 70

 Score = 89.9 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/67 (50%), Positives = 49/67 (73%)

Query: 56  IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +R  +E +Y++EGDLRR +  +I+R + + CY+G RHR+GLPVRGQRT TNARTRK   +
Sbjct: 1   MRDYLEANYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKR 60

Query: 116 GGVARKR 122
               +K+
Sbjct: 61  TVAGKKK 67


>gi|15897041|ref|NP_341646.1| 30S ribosomal protein S13P [Sulfolobus solfataricus P2]
 gi|284173385|ref|ZP_06387354.1| 30S ribosomal protein S13P [Sulfolobus solfataricus 98/2]
 gi|2500459|sp|P95986|RS13_SULSO RecName: Full=30S ribosomal protein S13P
 gi|1707820|emb|CAA69528.1| ribosomal protein S18 [Sulfolobus solfataricus P2]
 gi|13813206|gb|AAK40436.1| SSU ribosomal protein S13AB (rps13AB) [Sulfolobus solfataricus P2]
 gi|261601695|gb|ACX91298.1| ribosomal protein S13P [Sulfolobus solfataricus 98/2]
          Length = 165

 Score = 89.9 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI G ++    ++  AL  + GIG+ +++ I  KL + P  R+ +L ++EV ++   I 
Sbjct: 9   VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAIIRKLGMDPNARLGELSDAEVKKVESVIS 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + V  DL   V  +I+R      +RG+RH  GL VR
Sbjct: 69  DHTIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128

Query: 100 G 100
           G
Sbjct: 129 G 129


>gi|330834006|ref|YP_004408734.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
 gi|329566145|gb|AEB94250.1| 30S ribosomal protein S13P [Metallosphaera cuprina Ar-4]
          Length = 163

 Score = 89.9 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    +V   L  I GIG+ +++ I  KL I  +RR+ +L + E+ +I + +
Sbjct: 9   IVRLFGQDVDGTMKVPYGLAMIKGIGYNTARVILMKLNIDKDRRLGELNDHELKKIEEFL 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R   +  +RG+RH  GL V
Sbjct: 69  SNKRLETLPSWMYNRRKDLETGLDMHYVTSDLVFVVRNDIEREKKIKSWRGIRHSLGLKV 128

Query: 99  RG 100
           RG
Sbjct: 129 RG 130


>gi|213024276|ref|ZP_03338723.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 65

 Score = 89.2 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/64 (67%), Positives = 50/64 (78%), Gaps = 1/64 (1%)

Query: 54  IQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             +R  + + + VEGDLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK  
Sbjct: 1   DTLRDEVAK-FVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGP 59

Query: 114 GKGG 117
            K  
Sbjct: 60  CKPI 63


>gi|28189422|dbj|BAC56379.1| similar to 40S ribosomal protein S18 [Bos taurus]
 gi|28189799|dbj|BAC56514.1| similar to ribosomal protein S18 [Bos taurus]
          Length = 131

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 22/120 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131


>gi|56462228|gb|AAV91397.1| ribosomal protein 25 [Lonomia obliqua]
          Length = 116

 Score = 88.4 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 25/119 (21%)

Query: 26  GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ-------------------- 65
           G + S  +  K  I  ++R  +  E EV +I   +    Q                    
Sbjct: 1   GRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIPDWFLNRQKDIIDGKYS 60

Query: 66  --VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
                +L   +  +++RL  +  +RG+RH  GL VRGQ T T  R  +     GV++K+
Sbjct: 61  QLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 116


>gi|47207607|emb|CAF90116.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 132

 Score = 88.0 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 25/116 (21%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------V 66
            +  +  K  I   +R  +L E EV ++   ++   Q                      +
Sbjct: 20  YAHVVLRKADIDLNKRAGELTEEEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVL 79

Query: 67  EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
              L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 80  ANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 132


>gi|255018384|ref|ZP_05290510.1| 30S ribosomal protein S13 [Listeria monocytogenes FSL F2-515]
          Length = 68

 Score = 87.6 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)

Query: 55  QIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           +IR+ +++  +VEGDLRR V +NIKRL+++G YRG+RHRRGLPVRGQ T  NARTRK   
Sbjct: 2   KIREILDR-IKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNTKNNARTRKGPS 60

Query: 115 KGGVARKR 122
           K    +K+
Sbjct: 61  KTVAGKKK 68


>gi|28189549|dbj|BAC56389.1| similar to ribosomal protein S18 [Bos taurus]
          Length = 125

 Score = 87.2 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 22/120 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 6   ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 65

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                      +   L   +  +++RL  +  +RGLRH  GL V
Sbjct: 66  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 125


>gi|159475653|ref|XP_001695933.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii]
 gi|158275493|gb|EDP01270.1| mitochondrial ribosomal protein S13 [Chlamydomonas reinhardtii]
          Length = 124

 Score = 87.2 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           MA+I  V +        AL  + G+G  +S  +     I  + +V  + +S + ++   I
Sbjct: 1   MAQIQRVALFPHATFHIALARVFGLGKSTSLAVSEACGISKDLKVKDVKDSYIQKVTAYI 60

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFG 114
           E ++     L+R V  N+   + +   RG+RH  GLPV   +T +N    +K  
Sbjct: 61  EANFVTGDTLKRQVRENVLEEVAINSRRGVRHTLGLPVSSAQTRSNGVNARKLR 114


>gi|158187718|gb|ABW23148.1| ribosomal protein rps18 [Arenicola marina]
          Length = 114

 Score = 87.2 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 25/117 (21%)

Query: 28  KSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------------------- 65
           + S  +C K  +   +R  +L + EV +I   +    Q                      
Sbjct: 1   RYSHVVCKKADVDTSKRAGELSDEEVEKIVTIMSNPRQYKIPDWFLNRQKDVKDGKFSQI 60

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 61  MSNVLDSKIREDLERLKKIRVHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 114


>gi|224032085|gb|ACN35118.1| unknown [Zea mays]
          Length = 129

 Score = 87.2 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKEVGK 105

Query: 63  DYQVEGDL 70
            Y +EGDL
Sbjct: 106 -YMIEGDL 112


>gi|195653817|gb|ACG46376.1| 30S ribosomal protein S13 [Zea mays]
          Length = 124

 Score = 87.2 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI GV IP  KRV  +L YIHGIG   S+ I   L     +    L E EVI +R+ + +
Sbjct: 47  RIGGVEIPNHKRVEYSLQYIHGIGRSRSRQILLDLNFD-NKITKDLSEEEVITLRKEVGK 105

Query: 63  DYQVEGDLRRTVAMNI 78
            Y +EGDL+R   + I
Sbjct: 106 -YMIEGDLKRFNRVVI 120


>gi|38085727|ref|XP_357690.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|82902991|ref|XP_917433.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 148

 Score = 86.5 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 21/140 (15%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE--------SE 52
           + R+   NI   +++  A+  I G+G   +  +  K  I   +R  +L E         +
Sbjct: 12  ILRVLNTNIDGWQKIAFAITAIKGVGRSYAHVVLRKADIDLTKRAGELTECVITIMQNPQ 71

Query: 53  VIQI------RQAIEQDYQ----VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
             +I      RQ   +D +    +   L   +  +++ L  +  +RGL H  G  V  Q 
Sbjct: 72  QYKIPDWFLNRQKDVKDGKYRQVLANGLDNKLREDLEWLKKIRAHRGLHHFWGHRVCCQH 131

Query: 103 THTNARTRKKFGKGGVARKR 122
           T T  R        GV++K+
Sbjct: 132 TKTTGRRGCTM---GVSKKK 148


>gi|324575274|gb|ADY49937.1| 30S ribosomal protein S13 [Ascaris suum]
          Length = 62

 Score = 85.7 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 44/58 (75%)

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +VEGDLRR V +NIKRLM++  YRG+RHRRGLPVRGQ T  N+RTRK   K    +K+
Sbjct: 5   KVEGDLRREVQLNIKRLMEIASYRGIRHRRGLPVRGQHTKNNSRTRKGPRKTIANKKK 62


>gi|292559459|ref|YP_003540827.1| ribosomal protein S13 [Hartmannella vermiformis]
 gi|290775712|gb|ADD62211.1| ribosomal protein S13 [Hartmannella vermiformis]
          Length = 120

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 50/90 (55%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I+G+G+  S  +  KL       +  L       +   +++ Y  E  L+R+V +NI++ 
Sbjct: 22  IYGLGYSKSFHLLEKLGFSRLAWMQSLNLYRFNSLIFFLKKFYMTENILKRSVYLNIQKK 81

Query: 82  MDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           ++L  Y G RH   LP+RGQRTHTNA+T +
Sbjct: 82  INLNNYAGFRHISNLPIRGQRTHTNAKTSR 111


>gi|301500973|ref|YP_003795438.1| ribosomal protein S13 [Alveolata sp. CCMP3155]
 gi|300069519|gb|ADJ66626.1| ribosomal protein S13 [Chromerida sp. RM11]
          Length = 127

 Score = 85.3 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 1/112 (0%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+ GV +P ++ +  AL  + GI    +  +  +  + P+RRV  L   +V Q+R +   
Sbjct: 16  RLEGVLLPSSQHIKHALTNLKGIQHGRASILLLRARLNPKRRVGLLTNEQVKQLRTSFSN 75

Query: 63  -DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF 113
             +  E  L R+  ++ +RL +    RG+R RR L  RGQRT  N +T K+F
Sbjct: 76  ASFSTENVLMRSFFLSKQRLYEARLIRGVRLRRRLTNRGQRTKNNNKTIKRF 127


>gi|227831062|ref|YP_002832842.1| 30S ribosomal protein S13P [Sulfolobus islandicus L.S.2.15]
 gi|227457510|gb|ACP36197.1| ribosomal protein S13 [Sulfolobus islandicus L.S.2.15]
          Length = 166

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   I 
Sbjct: 9   VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVIS 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + V  DL   V  +I+R      +RG+RH  GL VR
Sbjct: 69  DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128

Query: 100 G 100
           G
Sbjct: 129 G 129


>gi|229579943|ref|YP_002838342.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.G.57.14]
 gi|229581396|ref|YP_002839795.1| 30S ribosomal protein S13P [Sulfolobus islandicus Y.N.15.51]
 gi|229585534|ref|YP_002844036.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.27]
 gi|238620496|ref|YP_002915322.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.16.4]
 gi|284998558|ref|YP_003420326.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
 gi|228010658|gb|ACP46420.1| ribosomal protein S13 [Sulfolobus islandicus Y.G.57.14]
 gi|228012112|gb|ACP47873.1| ribosomal protein S13 [Sulfolobus islandicus Y.N.15.51]
 gi|228020584|gb|ACP55991.1| ribosomal protein S13 [Sulfolobus islandicus M.16.27]
 gi|238381566|gb|ACR42654.1| ribosomal protein S13 [Sulfolobus islandicus M.16.4]
 gi|284446454|gb|ADB87956.1| ribosomal protein S13 [Sulfolobus islandicus L.D.8.5]
 gi|323475374|gb|ADX85980.1| ribosomal protein S13 [Sulfolobus islandicus REY15A]
 gi|323478099|gb|ADX83337.1| ribosomal protein S13 [Sulfolobus islandicus HVE10/4]
          Length = 166

 Score = 85.3 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   I 
Sbjct: 9   VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVIS 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + V  DL   V  +I+R      +RG+RH  GL VR
Sbjct: 69  DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128

Query: 100 G 100
           G
Sbjct: 129 G 129


>gi|114606879|ref|XP_001170276.1| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes]
 gi|119624101|gb|EAX03696.1| ribosomal protein S18, isoform CRA_c [Homo sapiens]
          Length = 128

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 22/117 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12  ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61  EQDYQ----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
           +   Q                      +   L   +  +++RL  +  +RGLRH  G
Sbjct: 72  QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128


>gi|269986619|gb|EEZ92901.1| ribosomal protein S13 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 179

 Score = 84.6 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 25/146 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K+V   L  I GIGF  S  +   L IP   ++  L E ++ ++++A+
Sbjct: 26  IVRIADTDLDGSKKVKDLLRSITGIGFSYSNALMKVLKIPEGEKLQDLDEKQLNELKEAL 85

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  +LR    M I+++     Y+G RH     +
Sbjct: 86  SNPFKYKLPHWLFNWRRDETTGLDYHLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKL 145

Query: 99  RGQRTHT---NARTRKKFGKGGVARK 121
           RGQ+  +   N   R     G V +K
Sbjct: 146 RGQKVRSRGANVHGRVGSSLGVVRKK 171


>gi|227828304|ref|YP_002830084.1| 30S ribosomal protein S13P [Sulfolobus islandicus M.14.25]
 gi|227460100|gb|ACP38786.1| ribosomal protein S13 [Sulfolobus islandicus M.14.25]
          Length = 166

 Score = 84.2 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 22/121 (18%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            RI G ++    ++  AL  + GIG+ +++ +  KL + P  R+ +L ++++ ++   + 
Sbjct: 9   VRIFGQDVDGTMKLPYALAMVKGIGYNTAKAMILKLGMDPNARLGELSDADIKKVESVLS 68

Query: 62  QD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVR 99
                                   + V  DL   V  +I+R      +RG+RH  GL VR
Sbjct: 69  DHAIKGLPSWLYNRRKDYESGLDLHLVTSDLIFYVRNDIEREKKSRSWRGVRHSLGLKVR 128

Query: 100 G 100
           G
Sbjct: 129 G 129


>gi|148665247|gb|EDK97663.1| mCG1037936 [Mus musculus]
          Length = 151

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 26/143 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   +I   +++   +  I  +G   +  +  K  I    +  +  E EV ++   +
Sbjct: 12  ILRVLNTDIDGRQKIGFTITAIKVVGRSYAHVVLRKTDIDL-TKAGERTEDEVERVITIM 70

Query: 61  EQDYQV--------------EGDLRR--------TVAMNIKRLMDLGCYRGLRHRRGLPV 98
           +   Q                G   +         +  ++++L  +  +RGLRH  GL V
Sbjct: 71  QNPRQYRIPDWFLNRQKDGKGGKYSQALASGPDNKLREDLEQLKKIRAHRGLRHFCGLLV 130

Query: 99  RGQRTHTNARTRKKFGKGGVARK 121
           RGQ T T  R  +     GV++K
Sbjct: 131 RGQHTKTTGRRGRTV---GVSKK 150


>gi|320101541|ref|YP_004177133.1| 30S ribosomal protein S13P [Desulfurococcus mucosus DSM 2162]
 gi|319753893|gb|ADV65651.1| SSU ribosomal protein S13P [Desulfurococcus mucosus DSM 2162]
          Length = 162

 Score = 84.2 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   ++     +V  L  + G+G+  S  +C  L + P +R   L +  V  I + +
Sbjct: 10  IVRILETDVDGELPLVYGLSEVKGLGYAFSLAVCRVLGLDPRQRTGFLSDDTVKSIEEVV 69

Query: 61  E---------------QDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                           +DY    DL          V  +I+R   +  +RG+RH  GL V
Sbjct: 70  RNPGKYGIPAWIYNRRKDYATGQDLHLTSANLIYYVKEDIEREKRIKSWRGIRHALGLKV 129

Query: 99  RG 100
           RG
Sbjct: 130 RG 131


>gi|148670323|gb|EDL02270.1| mCG49228 [Mus musculus]
          Length = 134

 Score = 83.8 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 22/137 (16%)

Query: 5   AGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
              NI   +++   +  I  +G + +  +  K  I   + V +L E EV ++   ++   
Sbjct: 1   LNTNIDGRRKIAFVITAIKDMGQRYTHVVLRKADIDLTKSVGELTEEEVERVITIMQNPR 60

Query: 65  Q-------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT 105
           Q                   +   +   +  +++RL  +  +RGL H  GL VR Q T T
Sbjct: 61  QYKIPDWFLNRQKDGKYSQVLANSIDSKLRESLERLKKIQAHRGLHHFWGLHVRSQHTKT 120

Query: 106 NARTRKKFGKGGVARKR 122
                +     GV++K+
Sbjct: 121 TGCRGRTV---GVSKKK 134


>gi|146304895|ref|YP_001192211.1| 30S ribosomal protein S13P [Metallosphaera sedula DSM 5348]
 gi|145703145|gb|ABP96287.1| SSU ribosomal protein S13P [Metallosphaera sedula DSM 5348]
          Length = 165

 Score = 83.4 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    +    L  + GIG+ +++ I  KL I  ++R+ +L + E+ +I + +
Sbjct: 9   IVRLFGQDVDGTMKAPYGLAMVKGIGYNTARVILMKLNIDKDKRLGELTDHELKKIEEML 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R   L  +RG+RH  GL V
Sbjct: 69  ANKKIESLPAWIFNRRKDIESGQDLHYVTSDLVFVVRNDIEREKKLKSWRGVRHSLGLKV 128

Query: 99  RG 100
           RG
Sbjct: 129 RG 130


>gi|290559361|gb|EFD92694.1| ribosomal protein S13 [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 179

 Score = 83.4 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RIA  ++  +K V   L  I GI F  S  +   L IP  +++  L E E+  +++A+
Sbjct: 27  IVRIADTDLDGSKAVKDLLRSIPGISFSYSNALMKVLNIPKGKKLQDLDEKELNTLKEAL 86

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +  DLR    M I+++     YRG RH     +
Sbjct: 87  SDPFKYKIPHWLFNWRRDDETGLDYHLLSNDLRSKTTMRIQKIKTSRSYRGYRHSFNYKL 146

Query: 99  RGQRTHT---NARTRKKFGKGGVARK 121
           RGQ+  +   N   R     G V +K
Sbjct: 147 RGQKVKSRGANVHGRVGSSLGVVKKK 172


>gi|238601365|ref|XP_002395391.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553]
 gi|215466046|gb|EEB96321.1| hypothetical protein MPER_04563 [Moniliophthora perniciosa FA553]
          Length = 162

 Score = 83.0 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/54 (50%), Positives = 34/54 (62%)

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            +  +E +LRR +  NI R   +G Y GLRH  GLPVRGQ T TNA+T KK  +
Sbjct: 105 NELVIETELRRQIRENIHRQRSIGSYVGLRHAMGLPVRGQNTQTNAKTAKKLNR 158


>gi|330929276|ref|XP_003302579.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1]
 gi|311321985|gb|EFQ89344.1| hypothetical protein PTT_14454 [Pyrenophora teres f. teres 0-1]
          Length = 92

 Score = 82.6 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             K  I P  +V  L  S ++ +   +  + ++E DLRR V  +I+RL D+G YRG RH 
Sbjct: 1   MAKFYIHPWAKVGSLKNSTLLDLTAEL-ANMKIENDLRRQVQDDIRRLRDMGTYRGRRHA 59

Query: 94  RGLPVRGQRTHTNARTRKKFGK 115
            GLPVRGQ+T T   T ++  K
Sbjct: 60  MGLPVRGQKTRTQITTARRLNK 81


>gi|186522813|ref|NP_001119224.1| 30S ribosomal protein S13, chloroplast (CS13) [Arabidopsis
           thaliana]
 gi|332004634|gb|AED92017.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
          Length = 128

 Score = 82.2 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           AR+ GV IP  KR+  +L YIHGIG   ++ I   L +   +    + E E+I +R  + 
Sbjct: 48  ARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQM-ENKITKDMAEEELIILRDEVS 106

Query: 62  QDYQVEGDL 70
           + Y +EGDL
Sbjct: 107 K-YMIEGDL 114


>gi|139438875|ref|ZP_01772335.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC
           25986]
 gi|133775586|gb|EBA39406.1| Hypothetical protein COLAER_01339 [Collinsella aerofaciens ATCC
           25986]
          Length = 59

 Score = 82.2 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/58 (68%), Positives = 46/58 (79%)

Query: 65  QVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            VEGDLRR    N+KRLMD+GC RGLRHR+GLPVRGQRTHTNARTRK   +   A+K+
Sbjct: 1   MVEGDLRRERNQNVKRLMDIGCNRGLRHRKGLPVRGQRTHTNARTRKGPKRQIGAKKK 58


>gi|218884677|ref|YP_002429059.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
 gi|218766293|gb|ACL11692.1| 30S ribosomal protein S13P [Desulfurococcus kamchatkensis 1221n]
          Length = 174

 Score = 82.2 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   ++     +V  L  + G+G+  S  IC  L + PE+RV  L +  V  I + +
Sbjct: 22  IVRMLETDVDGELPLVYGLSEVKGLGYTFSLAICRILGLNPEQRVGFLSDDVVKSIEEVV 81

Query: 61  ---------------EQDYQVEGDLR-------RTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                          ++DY    +L          V  +I+R   +  +RG+RH  GL V
Sbjct: 82  RNPGKYGIPSWIYNRQKDYTTGQNLHLTGANLVYYVKEDIEREKRVKSWRGIRHALGLKV 141

Query: 99  RG 100
           RG
Sbjct: 142 RG 143


>gi|11466590|ref|NP_066480.1| ribosomal protein S13 [Rhodomonas salina]
 gi|10444177|gb|AAG17751.1|AF288090_27 ribosomal protein S13 [Rhodomonas salina]
          Length = 102

 Score = 82.2 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           M RI    + R K V  AL  I G+G    + +CNK  I    +V  L + +VI I + I
Sbjct: 1   MVRIFEKFLNRKKLVFVALRSIFGLGSFQIRLLCNKCDIGSNCKVEHLSQGQVINICKKI 60

Query: 61  EQD-YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
           +Q+   VE  L+  V  +IKRL+ + C+RG  H++   +RG
Sbjct: 61  DQNKLFVESQLKSIVKFDIKRLIMVNCFRGFFHKK---LRG 98


>gi|300120359|emb|CBK19913.2| unnamed protein product [Blastocystis hominis]
 gi|300175444|emb|CBK20755.2| unnamed protein product [Blastocystis hominis]
 gi|300175526|emb|CBK20837.2| unnamed protein product [Blastocystis hominis]
          Length = 111

 Score = 81.5 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 25/113 (22%)

Query: 32  DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------VEGD 69
            +C K  I   RR  +L   E+ ++   I    Q                      V  +
Sbjct: 2   AVCKKAEIDISRRAGELSNDEIEKLIAVISTPLQFDIPEWFLNRQKDVETGKYRQVVSNN 61

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L+  +  ++ RL  +   RGLRH   L VRGQ T T  R  K     GV+ K+
Sbjct: 62  LQANLREDLNRLKKMRANRGLRHYWNLKVRGQHTKTTGRFGKSV---GVSTKK 111


>gi|295672670|ref|XP_002796881.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01]
 gi|226282253|gb|EEH37819.1| 30S ribosomal protein S13 [Paracoccidioides brasiliensis Pb01]
          Length = 114

 Score = 80.7 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             +  +    ++  L   +++ +  A+ +  ++E DLRR +  +I+RL D+G  RG RH 
Sbjct: 1   MARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQILNDIQRLKDIGTIRGRRHA 59

Query: 94  RGLPVRGQRTHT 105
            GLPVRGQRT +
Sbjct: 60  LGLPVRGQRTRS 71


>gi|224284395|gb|ACN39932.1| unknown [Picea sitchensis]
          Length = 89

 Score = 80.3 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 44/122 (36%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++++ AL  I GIG + +  +C K  +   +R                
Sbjct: 12  ILRVLNTNVDGRQKIMFALTSIKGIGRRLANLVCKKADVDMNKR---------------- 55

Query: 61  EQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
                                     +RGLRH  GL VRGQ T T  R  K     GV++
Sbjct: 56  -------------------------NHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSK 87

Query: 121 KR 122
           KR
Sbjct: 88  KR 89


>gi|310771932|emb|CBH28903.1| 40S RIBOSOMAL PROTEIN S18 [Anncaliia algerae]
          Length = 159

 Score = 80.3 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 25/144 (17%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   N+   ++V  A+  I GIG + ++ I  +  I   +R  +L E E+  +   I
Sbjct: 19  IIRMFNTNVDGNRKVAAAITMIKGIGKRMAEAIVKRTGIDSSKRAGELNEEELEILVDGI 78

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + +   +  T  + ++R   +   R  R    L V
Sbjct: 79  SNPKKLNIPEWMFNRVFDPVDGTTSHLIGTQIDATYRLQLERSKKIESVRSYRLMNNLKV 138

Query: 99  RGQRTHTNARTRKKFGKGGVARKR 122
           RGQRT +N R        GV+RK+
Sbjct: 139 RGQRTKSNGRGGSTV---GVSRKK 159


>gi|146420609|ref|XP_001486259.1| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 77

 Score = 79.5 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 43  RRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
            R++QL E +++ I + +  D  VEG L++ +  +IK    +G Y GLRH  GLPVRGQR
Sbjct: 1   MRMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGLRHASGLPVRGQR 59

Query: 103 THTNARTRKKFGK 115
           T  N+ T ++  +
Sbjct: 60  TRNNSSTARRLNR 72


>gi|61252180|sp|P0A4B0|RS13_LACLC RecName: Full=30S ribosomal protein S13
 gi|97982|pir||S17990 ribosomal protein S13 - Lactococcus lactis subsp. lactis
          (fragment)
 gi|44077|emb|CAA41943.1| ribosomal protein S13 [Lactococcus lactis]
          Length = 51

 Score = 79.2 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVES 51
          MAR AGV+IP  KR+V +L Y+ G+G ++S+ +     +  + R   L   
Sbjct: 1  MARFAGVDIPNEKRIVISLTYVFGVGLQTSKKVLAAAGVSEDIRTKDLTSD 51


>gi|241997536|ref|XP_002433417.1| 40S ribosomal protein S18, putative [Ixodes scapularis]
 gi|215490840|gb|EEC00481.1| 40S ribosomal protein S18, putative [Ixodes scapularis]
          Length = 150

 Score = 78.8 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESE 52
          + R+   NI   ++V+ AL  I G+G + S  +C K  +   +R  +L E E
Sbjct: 12 ILRVLNTNIDGRRKVMFALTAIKGVGRRFSNMVCKKADVDLNKRAGELTEEE 63


>gi|213612393|ref|ZP_03370219.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 51

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/49 (79%), Positives = 42/49 (85%)

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           DLRR ++M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 1   DLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 49


>gi|190345872|gb|EDK37832.2| hypothetical protein PGUG_01930 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 77

 Score = 78.4 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 43  RRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQR 102
            R++QL E +++ I + +  D  VEG L++ +  +IK    +G Y G RH  GLPVRGQR
Sbjct: 1   MRMNQLTEPQIMAINKELS-DISVEGHLKQKILDDIKLKRSIGSYAGSRHASGLPVRGQR 59

Query: 103 THTNARTRKKFGK 115
           T  N+ T ++  +
Sbjct: 60  TRNNSSTARRLNR 72


>gi|11466207|ref|NP_066530.1| ribosomal protein S13 [Naegleria gruberi]
 gi|10444242|gb|AAG17808.1|AF288092_33 ribosomal protein S13 [Naegleria gruberi]
          Length = 163

 Score = 78.0 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)

Query: 23  HGIGFKSSQDICNKLAIPPERRVHQLVESE----------VIQIRQA-IEQDYQVEGDLR 71
            GIG   ++ +C    + P  R+H  +++           + +I+   +     ++  L 
Sbjct: 37  FGIGVSIAKSLCYFSGLHPNLRIHLFLDNYFNSFYSNFYILKRIKYFFLTNKNNLDHFLH 96

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
           + +   I  L  + C +G RH   LPVRGQR  TNARTRK
Sbjct: 97  KEMISCINVLKTIRCLKGKRHSTFLPVRGQRNRTNARTRK 136


>gi|302501654|ref|XP_003012819.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371]
 gi|291176379|gb|EFE32179.1| hypothetical protein ARB_01070 [Arthroderma benhamiae CBS 112371]
          Length = 92

 Score = 76.8 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             +  I P   V +L   +V+ +  A+  + ++E DL+R +  NIKRL   G YRG RH 
Sbjct: 1   MARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILDNIKRLKTTGTYRGRRHA 59

Query: 94  RGLPVRGQRTHT 105
             LPVRGQ T +
Sbjct: 60  LNLPVRGQNTRS 71


>gi|241865174|gb|ACS68665.1| ribosomal protein S18 [Sonneratia alba]
 gi|241865406|gb|ACS68735.1| ribosomal protein S18 [Sonneratia alba]
          Length = 105

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 22/104 (21%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+   N+   ++++ AL  I GIG + +  +C K  +   +R  +L  +E+  +   +  
Sbjct: 2   RVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAAELDNLMVIVAN 61

Query: 63  DYQ----------------------VEGDLRRTVAMNIKRLMDL 84
             Q                      V   L   +  +++RL  +
Sbjct: 62  PRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKI 105


>gi|145549051|ref|XP_001460205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428034|emb|CAK92808.1| unnamed protein product [Paramecium tetraurelia]
          Length = 193

 Score = 76.5 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 15/112 (13%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + RI   N+   +++   +  I GIG + +  IC  L +   +R  +L + E  +I + I
Sbjct: 14  IIRILNTNVDGKQQMAYEIRSIKGIGRRFAIQICKVLRLNLTKRAGELTDEEAHKITEVI 73

Query: 61  ------------EQDYQV-EGDLRRTVAMNIKRLMDLG--CYRGLRHRRGLP 97
                        ++Y+V   +L   +  +++R+  +    +  LRH  GL 
Sbjct: 74  KMVPQYIRDLKNGKNYEVTTNELETKLREDLERIKKIKYSQWLCLRHHWGLR 125


>gi|27661504|ref|XP_232915.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
 gi|109476520|ref|XP_001058861.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 170

 Score = 75.3 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 19/135 (14%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   NI   +    A+    G   + +  +  K  I   +   +L E +V ++   ++  
Sbjct: 15  VLNTNIDEQQETAFAITATKGAEQRYAHVVLRKAGIDLTKMAGELTEDKVERVITIMQNP 74

Query: 64  YQVE----------------GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
            Q E                  L   +   ++RL  +  +RGLRH  GL V  Q T ++ 
Sbjct: 75  RQYEIPQKGVRDGRCSQVPANGLDNKLREELERLKKIRAHRGLRHFWGLHVHCQLTMSHG 134

Query: 108 RTRKKFGKGGVARKR 122
                    G ++K+
Sbjct: 135 CRGYTV---GASKKK 146


>gi|302662738|ref|XP_003023020.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517]
 gi|291186996|gb|EFE42402.1| hypothetical protein TRV_02841 [Trichophyton verrucosum HKI 0517]
          Length = 88

 Score = 75.3 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             +  I P   V +L   +V+ +  A+  + ++E DL+R +  NIKRL   G YRG RH 
Sbjct: 1   MARFHIHPTSTVGELATRQVLDLTGALS-NMKIENDLKREILDNIKRLKTTGTYRGRRHA 59

Query: 94  RGLPVRGQRTHT 105
             LPVRGQ T +
Sbjct: 60  LNLPVRGQNTRS 71


>gi|194771388|ref|XP_001967671.1| GF22723 [Drosophila ananassae]
 gi|190619389|gb|EDV34913.1| GF22723 [Drosophila ananassae]
          Length = 97

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + RI   NI   ++V  A+  I G+G + S  +  K  +   +R  +  E EV ++   I
Sbjct: 12 ILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTII 71

Query: 61 EQDYQ 65
              Q
Sbjct: 72 SNPLQ 76


>gi|154279122|ref|XP_001540374.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150412317|gb|EDN07704.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|225562357|gb|EEH10636.1| 40S ribosomal protein S13 [Ajellomyces capsulatus G186AR]
          Length = 92

 Score = 74.9 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             +  +    ++  L   +V+ +  A+ +  ++E DLRR +  +I+RL D G  RG RH 
Sbjct: 1   MARFYVHETAKIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLKDTGTVRGRRHA 59

Query: 94  RGLPVRGQRTHTNARTRKKFGK 115
            GLPVRGQ T +  +T  K  K
Sbjct: 60  LGLPVRGQNTRSQIKTAIKLNK 81


>gi|10802919|gb|AAG23667.1|AF288091_12 ribosomal protein S13 [Thraustochytrium aureum]
          Length = 120

 Score = 74.5 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----V 66
           + K +   L     IG    + I     +  +  +    ES++  +   IE+++     +
Sbjct: 10  KNKTLFNVLRDTKSIGPIKIKYIAKITGLSLKTPISLFSESQLEHLSIWIEKNFTGSNCI 69

Query: 67  EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
             +  +  +   K+++     R LR ++GLPVRGQRT TNA+T K+  KG
Sbjct: 70  HTEFLQIKSEEKKKIIASKSLRSLRFKKGLPVRGQRTKTNAKTAKRLNKG 119


>gi|261201520|ref|XP_002627160.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081]
 gi|239592219|gb|EEQ74800.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis SLH14081]
 gi|239611623|gb|EEQ88610.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ER-3]
 gi|327357911|gb|EGE86768.1| 40S ribosomal protein S13 [Ajellomyces dermatitidis ATCC 18188]
          Length = 92

 Score = 73.8 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 34  CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
             +  +    ++  L   +V+ +  A+ +  ++E DLRR +  +I+RL D G  RG RH 
Sbjct: 1   MARFYVHETAKIGDLANKQVLSLTAALSE-MKIENDLRRQILDDIRRLRDTGTTRGRRHA 59

Query: 94  RGLPVRGQRTHTNARTRKKFGK 115
            GLPVRGQ T +  +T  K  K
Sbjct: 60  LGLPVRGQNTRSQIKTAIKLNK 81


>gi|262401179|gb|ACY66492.1| 40S ribosomal protein S18 [Scylla paramamosain]
          Length = 77

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + R+   NI   ++V+ A+  I G+G + S  +  K  I   +R  +L E EV +I   +
Sbjct: 12 ILRLMNTNIDGRRKVMFAMTAIKGVGRRYSNIVLKKADIDQTKRAGELTEEEVEKIVTIM 71

Query: 61 EQDYQ 65
              Q
Sbjct: 72 SNPRQ 76


>gi|224980450|gb|ACN73088.1| COSII_At5g14320 [Solanum dulcamara]
          Length = 83

 Score = 73.4 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  L E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLSEEEL 82


>gi|224980452|gb|ACN73089.1| COSII_At5g14320 [Datura inoxia]
          Length = 83

 Score = 73.0 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  L E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLSEEEL 82


>gi|213647332|ref|ZP_03377385.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 44

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/42 (83%), Positives = 36/42 (85%)

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           M+IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 1   MSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 42


>gi|119624103|gb|EAX03698.1| ribosomal protein S18, isoform CRA_d [Homo sapiens]
          Length = 144

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61 EQDYQ 65
          +   Q
Sbjct: 72 QNPRQ 76


>gi|114329906|ref|YP_740808.1| ribosomal protein S13 [Tetrahymena pigmentosa]
 gi|114150139|gb|ABI51717.1| ribosomal protein S13 [Tetrahymena pigmentosa]
          Length = 276

 Score = 72.6 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 44/89 (49%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
            I+G    + + I ++        +    +SE  + +  I + +     ++  V  NI  
Sbjct: 24  KIYGWNNFTYKIIYDRFEKFYSNNLISYKDSEWKKFKSIILKFFPKSRSIKNRVDCNIFF 83

Query: 81  LMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 84  LDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|148678284|gb|EDL10231.1| mCG23000, isoform CRA_a [Mus musculus]
          Length = 103

 Score = 71.8 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + R+   NI   +++  A+  I G+G + +  +  K  I   +R  +L E EV ++   +
Sbjct: 12 ILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIM 71

Query: 61 EQDYQ 65
          +   Q
Sbjct: 72 QNPRQ 76


>gi|70605930|ref|YP_254800.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius DSM 639]
 gi|73920772|sp|P39470|RS13_SULAC RecName: Full=30S ribosomal protein S13P
 gi|68566578|gb|AAY79507.1| 30S ribosomal protein S13P [Sulfolobus acidocaldarius DSM 639]
          Length = 170

 Score = 71.5 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 22/122 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    ++  AL  I GIG+ ++  I  KL +  ++R+ ++ + ++ +I   +
Sbjct: 9   IVRLFGQDVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLL 68

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPV 98
                                    + V  DL   V  +I+R      +RG+RH  GL V
Sbjct: 69  NNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFYVRNDIERERRSRSWRGVRHSLGLKV 128

Query: 99  RG 100
           RG
Sbjct: 129 RG 130


>gi|224980432|gb|ACN73079.1| COSII_At5g14320 [Solanum peruvianum]
          Length = 83

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMSEEEL 82


>gi|11466256|ref|NP_049571.1| ribosomal protein S13 [Tetrahymena pyriformis]
 gi|5306132|gb|AAD41916.1|AF160864_4 ribosomal protein S13 [Tetrahymena pyriformis]
          Length = 276

 Score = 71.5 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 43/89 (48%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
            I+G    + + I  +        +    ++E  + +  +   +    +L+  V  NI  
Sbjct: 24  KIYGWKNYTYKIIYERFEKYYHNNIISYKDAEWKKFKSILLHFFPKSRNLKNRVDCNIFF 83

Query: 81  LMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 84  LDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|224980416|gb|ACN73071.1| COSII_At5g14320 [Solanum cheesmaniae]
 gi|224980418|gb|ACN73072.1| COSII_At5g14320 [Solanum galapagense]
 gi|224980420|gb|ACN73073.1| COSII_At5g14320 [Solanum lycopersicum]
 gi|224980422|gb|ACN73074.1| COSII_At5g14320 [Solanum pimpinellifolium]
 gi|224980424|gb|ACN73075.1| COSII_At5g14320 [Solanum chmielewskii]
 gi|224980426|gb|ACN73076.1| COSII_At5g14320 [Solanum neorickii]
 gi|224980428|gb|ACN73077.1| COSII_At5g14320 [Solanum arcanum]
 gi|224980440|gb|ACN73083.1| COSII_At5g14320 [Solanum pennellii]
 gi|224980442|gb|ACN73084.1| COSII_At5g14320 [Solanum juglandifolium]
          Length = 83

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMSEEEL 82


>gi|289808335|ref|ZP_06538964.1| 30S ribosomal protein S13 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 42

 Score = 70.7 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/40 (85%), Positives = 34/40 (85%)

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           IKRLMDLGCYRGLRHRRGLPVRGQRT TNARTRK   K  
Sbjct: 1   IKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPCKPI 40


>gi|224980698|gb|ACN73212.1| COSII_At5g14320 [Solanum stenophyllidium]
          Length = 83

 Score = 70.3 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82


>gi|15027633|ref|NP_149367.1| ribosomal protein S13 [Tetrahymena thermophila]
 gi|15011469|gb|AAK77564.1|AF396436_4 ribosomal protein S13 [Tetrahymena thermophila]
          Length = 276

 Score = 69.9 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++E  + +  +   +     L+  +  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 53  DTEWKKFKSILSTFFPKSRSLKNRMDTNIFFLDFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|224980434|gb|ACN73080.1| COSII_At5g14320 [Solanum corneliomuelleri]
 gi|224980436|gb|ACN73081.1| COSII_At5g14320 [Solanum chilense]
          Length = 83

 Score = 69.5 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|224980430|gb|ACN73078.1| COSII_At5g14320 [Solanum huaylasense]
          Length = 83

 Score = 69.5 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|83001915|ref|XP_899585.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus]
 gi|83002589|ref|XP_909720.1| PREDICTED: 40S ribosomal protein S18-like isoform 2 [Mus musculus]
          Length = 141

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 30/138 (21%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   +I    ++  A+  I G+G   +  +  K  I       +L E  V  +   ++  
Sbjct: 15  VLNTDIDGRWKIATAI--IKGVGRSYAHVVLRKTDI------GELTEDGVEHLITIMQNP 66

Query: 64  YQ-------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTH 104
            Q                   +   L   +  + +RL  +  + GL H  GL + GQ T 
Sbjct: 67  RQYRIPDWFLNRQKDGKYSQVLVNGLDNKLREDPERLKKIRAHSGLLHLWGLRIHGQHTK 126

Query: 105 TNARTRKKFGKGGVARKR 122
           T     +     GV +K+
Sbjct: 127 TTGHGGRTV---GVFKKK 141


>gi|224980696|gb|ACN73211.1| COSII_At5g14320 [Solanum bulbocastanum]
 gi|224980700|gb|ACN73213.1| COSII_At5g14320 [Solanum trifidum]
 gi|224980702|gb|ACN73214.1| COSII_At5g14320 [Solanum polyadenium]
          Length = 83

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82


>gi|309266890|ref|XP_003086890.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
 gi|309271450|ref|XP_003085324.1| PREDICTED: 40S ribosomal protein S18-like [Mus musculus]
          Length = 145

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 34/142 (23%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +   +I    ++  A+  I G+G   +  +  K  I       +L E  V  +   ++  
Sbjct: 15  VLNTDIDGRWKIATAI--IKGVGRSYAHVVLRKTDI------GELTEDGVEHLITIMQNP 66

Query: 64  YQ-----------------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
            Q                       +   L   +  + +RL  +  + GL H  GL + G
Sbjct: 67  RQYRIPAPPPHWFLNRQKDGKYSQVLVNGLDNKLREDPERLKKIRAHSGLLHLWGLRIHG 126

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T T     +     GV +K+
Sbjct: 127 QHTKTTGHGGRTV---GVFKKK 145


>gi|224980706|gb|ACN73216.1| COSII_At5g14320 [Solanum andreanum]
          Length = 83

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82


>gi|110812358|gb|ABG91714.1| ribosomal protein S13 [Shewanella putrefaciens 200]
          Length = 44

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/42 (80%), Positives = 35/42 (83%)

Query: 76  MNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           MNIKRLMDLGCYRGLRHRR LP+RGQRT TNARTRK   K  
Sbjct: 1   MNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPI 42


>gi|224980708|gb|ACN73217.1| COSII_At5g14320 [Solanum raphanifolium]
          Length = 83

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|224980438|gb|ACN73082.1| COSII_At5g14320 [Solanum habrochaites]
 gi|224980446|gb|ACN73086.1| COSII_At5g14320 [Solanum lycopersicoides]
 gi|224980448|gb|ACN73087.1| COSII_At5g14320 [Solanum sitiens]
          Length = 83

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|269866923|ref|XP_002652434.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
 gi|220062509|gb|EED41622.1| SSU ribosomal protein S13P [Enterocytozoon bieneusi H348]
          Length = 137

 Score = 69.1 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 22/117 (18%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+   NI   K++V AL  I G+G + ++    +  + P +   +L   E+  I+  I
Sbjct: 21  IIRLYNTNIDGTKKIVFALTRIRGLGMRFAKAAVLRAGVDPSKFAGELSPEEIASIQNVI 80

Query: 61  EQD----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
           ++                       + V   L   + M I++       RG R   G
Sbjct: 81  DEPLKYSIPEYFLNHQKDSVTGEDEHLVGIKLDGDLRMLIEKAKKFKEIRGCRLAMG 137


>gi|114329861|ref|YP_740764.1| ribosomal protein S13 [Tetrahymena paravorax]
 gi|114150094|gb|ABI51673.1| ribosomal protein S13 [Tetrahymena paravorax]
          Length = 276

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++E  + +  +          +    +NI  L  +  YRGLRH +GLPVRGQRT TNA +
Sbjct: 53  DAEWKKFKSILSNFAPKNRTFKDRFNINIFFLDFMNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|326485535|gb|EGE09545.1| 30S ribosomal protein S13p/S18e [Trichophyton equinum CBS 127.97]
          Length = 103

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 25/100 (25%)

Query: 45  VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLM 82
             ++   E+ +I   I+   Q                      +   +   +  +++RL 
Sbjct: 6   AGEISSEELERIVTIIQNPTQYKIPTWFLNRQRDITDGKDTQVLANQMDSKLREDLERLK 65

Query: 83  DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 66  KIRAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 102


>gi|161899393|ref|XP_001712923.1| ribosomal protein S18 [Bigelowiella natans]
 gi|75756417|gb|ABA27311.1| ribosomal protein S18 [Bigelowiella natans]
          Length = 159

 Score = 68.8 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 24/142 (16%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           RI   NI  +      L  I G+G + S  +   L      +++ + ++++ ++     +
Sbjct: 20  RIFDCNINGSLSCNFGLRNIKGVGIRMSNVLRKILKKDINYKLYNIEKADLEEVVNIFGK 79

Query: 63  D----------------------YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                  + +   L   +  +IKRL+ +   +GLRH   L  RG
Sbjct: 80  SSRKAFPSWLMNRRADFLTGDNLHVLSTVLDSALQEDIKRLVTIKNNKGLRHLSRLKTRG 139

Query: 101 QRTHTNARTRKKFGKGGVARKR 122
           Q T +N R  K  G   V +K+
Sbjct: 140 QHTKSNGRRGKTIG--VVRKKK 159


>gi|224980710|gb|ACN73218.1| COSII_At5g14320 [Solanum brevicaule]
 gi|224980712|gb|ACN73219.1| COSII_At5g14320 [Solanum verrucosum]
          Length = 83

 Score = 68.8 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|5441533|emb|CAB46821.1| Ribosomal protein [Canis lupus familiaris]
          Length = 97

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 25/100 (25%)

Query: 45  VHQLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLM 82
             +L E EV ++   ++   Q                      +   L   +  +++RL 
Sbjct: 1   AGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLK 60

Query: 83  DLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 61  KIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 97


>gi|224980704|gb|ACN73215.1| COSII_At5g14320 [Solanum albornozii]
          Length = 83

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMSEEEL 82


>gi|297790005|ref|XP_002862918.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308691|gb|EFH39177.1| hypothetical protein ARALYDRAFT_921063 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 60

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 34/51 (66%)

Query: 72  RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           R V   I+RL+++ CYRG RHR G+P RGQRT TNART+K        +K+
Sbjct: 6   RRVGSEIQRLVEVDCYRGSRHRHGMPCRGQRTKTNARTKKGKAVAIAGKKK 56


>gi|114329815|ref|YP_740719.1| ribosomal protein S13 [Tetrahymena malaccensis]
 gi|114150048|gb|ABI51628.1| ribosomal protein S13 [Tetrahymena malaccensis]
          Length = 276

 Score = 68.4 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 50  ESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
           ++E  + +  +   +     L+  +  NI  L  L  YRGLRH +GLPVRGQRT TNA +
Sbjct: 53  DNEWKKFKAILITFFPKSRSLKNRIDTNIFFLEFLNTYRGLRHSKGLPVRGQRTWTNAWS 112


>gi|224980716|gb|ACN73221.1| COSII_At5g14320 [Solanum palustre]
          Length = 83

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMSEEEL 82


>gi|224980444|gb|ACN73085.1| COSII_At5g14320 [Solanum ochranthum]
          Length = 83

 Score = 67.6 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRITARQILVDLQM-ENKVMKDMSEEEL 82


>gi|154313500|ref|XP_001556076.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10]
 gi|150849516|gb|EDN24709.1| hypothetical protein BC1G_05447 [Botryotinia fuckeliana B05.10]
          Length = 82

 Score = 67.6 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
             +E +L+R +  NI+R+  +G YRG RH  GLPVRGQ T +   T +K  K  +A
Sbjct: 1   MPLETELKRRLQDNIERMRTMGSYRGRRHAMGLPVRGQNTKSQISTARKLNKDCIA 56


>gi|224980714|gb|ACN73220.1| COSII_At5g14320 [Solanum etuberosum]
          Length = 83

 Score = 66.8 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + E E+
Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVHLQM-ENKVMKDMSEEEL 82


>gi|71725687|gb|AAZ38989.1| 40S ribosomal protein S18 [Oxyuranus scutellatus]
          Length = 95

 Score = 66.4 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 25/98 (25%)

Query: 47  QLVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDL 84
           +L E EV ++   ++   Q                      +   L   +  +++RL  +
Sbjct: 1   ELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKI 60

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
             +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 61  RAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 95


>gi|25553586|dbj|BAC24851.1| ribosomal protein S18-like [Oryza sativa Japonica Group]
 gi|50509336|dbj|BAD30794.1| ribosomal protein S18-like [Oryza sativa Japonica Group]
          Length = 145

 Score = 66.1 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           V   L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K     GV++KR
Sbjct: 92  VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTV---GVSKKR 145


>gi|169837741|ref|ZP_02870929.1| 30S ribosomal protein S13 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 53

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/36 (77%), Positives = 30/36 (83%)

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           NIKRL D+  YRGLRH+ GLPVRGQRT TNARTRK 
Sbjct: 2   NIKRLKDVNSYRGLRHKSGLPVRGQRTRTNARTRKG 37


>gi|302023186|ref|ZP_07248397.1| 30S ribosomal protein S13 [Streptococcus suis 05HAS68]
          Length = 44

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/34 (55%), Positives = 25/34 (73%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDIC 34
          MARIAGV+IP  KRVV +L Y++GIG  +S+   
Sbjct: 1  MARIAGVDIPNDKRVVISLTYVYGIGLATSKKFL 34


>gi|148683548|gb|EDL15495.1| mCG4355 [Mus musculus]
          Length = 142

 Score = 65.7 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 22/103 (21%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ--------- 65
           +  A+  I G+G   +  +  K  I   +R  +  E EV ++   ++   Q         
Sbjct: 6   IAFAITAIKGVGRSYAPVVLGKADIDLTKRAGEPTEDEVERVITIMQNPRQYKIPDWFLT 65

Query: 66  -------------VEGDLRRTVAMNIKRLMDLGCYRGLRHRRG 95
                        +   L   +  +++RL  +  +RGLR+  G
Sbjct: 66  RQKDVKDGKCSQVLANGLDNKLRDDLERLKKIRAHRGLRYFWG 108


>gi|327186933|gb|AEA30871.1| hypothetical protein [Solanum dulcamara]
          Length = 73

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  L 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDLS 73


>gi|121706874|ref|XP_001271657.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1]
 gi|119399805|gb|EAW10231.1| hypothetical protein ACLA_046960 [Aspergillus clavatus NRRL 1]
          Length = 57

 Score = 65.3 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/52 (53%), Positives = 33/52 (63%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
            ++E DLRR V  +IKRL + G YRG RH  GLPVRGQRT T   T  K  +
Sbjct: 1   MKIENDLRRQVLDDIKRLKETGSYRGRRHALGLPVRGQRTRTQISTAVKLNR 52


>gi|301139172|gb|ADK66001.1| COSII_At5g14320 [Solanum andreanum]
          Length = 77

 Score = 64.9 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|301139572|gb|ADK66201.1| COSII_At5g14320 [Solanum stenophyllidium]
          Length = 77

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + V  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVVKDMS 77


>gi|301139470|gb|ADK66150.1| COSII_At5g14320 [Solanum marinasense]
          Length = 77

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|517287|emb|CAA56477.1| ribosomal protein S13 [Sulfolobus acidocaldarius]
          Length = 184

 Score = 64.5 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 23/121 (19%)

Query: 1   MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           + R+ G ++    ++  AL  I GIG+ ++  I  KL +  ++R+ ++ + ++ +I   +
Sbjct: 9   IVRLFGQDVDGTMKLPYALAMIKGIGYNTAMIIIRKLNLDKDKRLGEISDEDIKKIENLL 68

Query: 61  ---------------EQDYQVEGDLRRTVAMNIKRLMDL--------GCYRGLRHRRGLP 97
                          ++DY+   D+    +  I   +++          +RG+RH  GL 
Sbjct: 69  NNKIIPESPNWIYNRQKDYESGADMHLVTSDLIFLQLEMILRGRGRSRSWRGVRHSLGLK 128

Query: 98  V 98
           V
Sbjct: 129 V 129


>gi|22653468|gb|AAN04078.1| ribosomal protein S13 [Amoebidium parasiticum]
          Length = 130

 Score = 64.1 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ-------------VE 67
            ++GIG K    I  +L +   +    +   E  QI   I++  +             +E
Sbjct: 25  KVYGIGEKEYATISVQLGLSSNQ-GRGVTSYERSQIDTYIKRRMKFTMLITPDFHTKPIE 83

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +LR  +   I  L ++  Y+G+RH++GLPV GQRT TNA + ++
Sbjct: 84  QNLRAAMNAKILTLQNIKTYKGIRHKKGLPVNGQRTKTNAISARR 128


>gi|301139558|gb|ADK66194.1| COSII_At5g14320 [Solanum x sambucinum]
          Length = 77

 Score = 64.1 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|301139200|gb|ADK66015.1| COSII_At5g14320 [Solanum stenophyllidium]
 gi|301139202|gb|ADK66016.1| COSII_At5g14320 [Solanum stenophyllidium]
 gi|301139570|gb|ADK66200.1| COSII_At5g14320 [Solanum stenophyllidium]
          Length = 77

 Score = 64.1 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|301139364|gb|ADK66097.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139366|gb|ADK66098.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139374|gb|ADK66102.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139376|gb|ADK66103.1| COSII_At5g14320 [Solanum huancabambense]
          Length = 77

 Score = 63.8 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|301139434|gb|ADK66132.1| COSII_At5g14320 [Solanum jalcae]
          Length = 74

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 28 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 74


>gi|301139248|gb|ADK66039.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 77

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMS 77


>gi|301139210|gb|ADK66020.1| COSII_At5g14320 [Solanum chilliasense]
 gi|301139222|gb|ADK66026.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 77

 Score = 63.8 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQM-ENKVMKDMS 77


>gi|119616402|gb|EAW95996.1| hCG1642200 [Homo sapiens]
          Length = 112

 Score = 63.8 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + R+   NI    ++  A+  I G+G + +  +  K  I    RV +L E EV  +   +
Sbjct: 12 ILRVFKTNIDEWCKITFAITAIKGVGQRYAHVVLRKADIDLTSRVGELTEDEVECVITMM 71

Query: 61 EQDYQ 65
          +  +Q
Sbjct: 72 QNPHQ 76


>gi|327186963|gb|AEA30886.1| hypothetical protein [Solanum hougasii]
          Length = 73

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|226473484|emb|CAX71427.1| ribosomal protein S18 [Schistosoma japonicum]
          Length = 82

 Score = 63.4 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RG+RH  GL VRGQ T T  R  +     GV+RK+
Sbjct: 33  LETKLREDLERLKRIRSHRGIRHYWGLRVRGQHTKTTGRRGRTV---GVSRKK 82


>gi|114599203|ref|XP_526860.2| PREDICTED: similar to ribosomal protein [Pan troglodytes]
          Length = 112

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
          + R+   NI    ++  A+  I G+G   +  +  K  I    RV +L E EV  +    
Sbjct: 12 ILRVFNTNIDEWCKITFAITAIKGVGQIYAHVVLRKADIDLTSRVGELTEDEVECVITMT 71

Query: 61 EQDYQ 65
          +  +Q
Sbjct: 72 QNPHQ 76


>gi|327187113|gb|AEA30961.1| hypothetical protein [Solanum stoloniferum]
 gi|327187137|gb|AEA30973.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|327186831|gb|AEA30820.1| hypothetical protein [Solanum agrimonifolium]
          Length = 73

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|301139450|gb|ADK66140.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 77

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|326516128|dbj|BAJ88087.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 100

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
               L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 47  TSSTLDSKLREDLERLKKIKAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 100


>gi|301139544|gb|ADK66187.1| COSII_At5g14320 [Solanum scabrifolium]
          Length = 77

 Score = 63.4 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|310769817|gb|ADP21466.1| ribosomal protein S18 [Antheraea yamamai]
          Length = 82

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
              +L   +  +++RL  +  +RG+RH  GL VRGQ T T  R  +     GV++K+
Sbjct: 29  TSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 82


>gi|4139068|gb|AAD03679.1| ribosomal protein S18 [Cricetulus sp.]
          Length = 95

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 25/97 (25%)

Query: 48  LVESEVIQIRQAIEQDYQ----------------------VEGDLRRTVAMNIKRLMDLG 85
           L E EV ++   ++   Q                      +   L   +  +++RL  + 
Sbjct: 2   LNEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIR 61

Query: 86  CYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 62  AHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 95


>gi|508718|gb|AAC36889.1| homolog [Chlamydia trachomatis]
          Length = 46

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 29/45 (64%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRV 45
          M RI G++IP  K++  +L YI+GIG   S++I  +L + PE R 
Sbjct: 1  MPRIIGIDIPAKKKLKISLTYIYGIGPALSKEIIARLQLNPEARA 45


>gi|301139574|gb|ADK66202.1| COSII_At5g14320 [Solanum tarnii]
 gi|301139576|gb|ADK66203.1| COSII_At5g14320 [Solanum tarnii]
 gi|301139578|gb|ADK66204.1| COSII_At5g14320 [Solanum tarnii]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|327186939|gb|AEA30874.1| hypothetical protein [Solanum hjertingii]
 gi|327186943|gb|AEA30876.1| hypothetical protein [Solanum hjertingii]
 gi|327186947|gb|AEA30878.1| hypothetical protein [Solanum hjertingii]
 gi|327186951|gb|AEA30880.1| hypothetical protein [Solanum hjertingii]
 gi|327186955|gb|AEA30882.1| hypothetical protein [Solanum hjertingii]
 gi|327186959|gb|AEA30884.1| hypothetical protein [Solanum hjertingii]
 gi|327187061|gb|AEA30935.1| hypothetical protein [Solanum schenckii]
 gi|327187067|gb|AEA30938.1| hypothetical protein [Solanum schenckii]
 gi|327187073|gb|AEA30941.1| hypothetical protein [Solanum schenckii]
 gi|327187079|gb|AEA30944.1| hypothetical protein [Solanum schenckii]
 gi|327187083|gb|AEA30946.1| hypothetical protein [Solanum schenckii]
 gi|327187089|gb|AEA30949.1| hypothetical protein [Solanum schenckii]
 gi|327187097|gb|AEA30953.1| hypothetical protein [Solanum stoloniferum]
 gi|327187101|gb|AEA30955.1| hypothetical protein [Solanum stoloniferum]
 gi|327187105|gb|AEA30957.1| hypothetical protein [Solanum stoloniferum]
 gi|327187109|gb|AEA30959.1| hypothetical protein [Solanum stoloniferum]
 gi|327187123|gb|AEA30966.1| hypothetical protein [Solanum stoloniferum]
 gi|327187129|gb|AEA30969.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|301139454|gb|ADK66142.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139416|gb|ADK66123.1| COSII_At5g14320 [Solanum immite]
          Length = 71

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 25 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKMMKDMS 71


>gi|301139452|gb|ADK66141.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139460|gb|ADK66145.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139456|gb|ADK66143.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 76

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76


>gi|301139268|gb|ADK66049.1| COSII_At5g14320 [Solanum chancayense]
 gi|301139368|gb|ADK66099.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139370|gb|ADK66100.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139372|gb|ADK66101.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139448|gb|ADK66139.1| COSII_At5g14320 [Solanum mochiquense]
 gi|301139580|gb|ADK66205.1| COSII_At5g14320 [Solanum trinitense]
 gi|301139582|gb|ADK66206.1| COSII_At5g14320 [Solanum trinitense]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139216|gb|ADK66023.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139540|gb|ADK66185.1| COSII_At5g14320 [Solanum piurae]
          Length = 67

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 67


>gi|327186829|gb|AEA30819.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186833|gb|AEA30821.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186835|gb|AEA30822.1| hypothetical protein [Solanum agrimonifolium]
 gi|327186859|gb|AEA30834.1| hypothetical protein [Solanum albicans]
 gi|327186875|gb|AEA30842.1| hypothetical protein [Solanum chomatophilum]
 gi|327186887|gb|AEA30848.1| hypothetical protein [Solanum colombianum]
 gi|327186965|gb|AEA30887.1| hypothetical protein [Solanum hougasii]
 gi|327186971|gb|AEA30890.1| hypothetical protein [Solanum hougasii]
 gi|327186977|gb|AEA30893.1| hypothetical protein [Solanum hougasii]
 gi|327186983|gb|AEA30896.1| hypothetical protein [Solanum hougasii]
 gi|327186989|gb|AEA30899.1| hypothetical protein [Solanum hougasii]
 gi|327187001|gb|AEA30905.1| hypothetical protein [Solanum iopetalum]
 gi|327187007|gb|AEA30908.1| hypothetical protein [Solanum iopetalum]
 gi|327187013|gb|AEA30911.1| hypothetical protein [Solanum iopetalum]
 gi|327187025|gb|AEA30917.1| hypothetical protein [Solanum iopetalum]
 gi|327187043|gb|AEA30926.1| hypothetical protein [Solanum moscopanum]
 gi|327187045|gb|AEA30927.1| hypothetical protein [Solanum moscopanum]
 gi|327187049|gb|AEA30929.1| hypothetical protein [Solanum moscopanum]
 gi|327187051|gb|AEA30930.1| hypothetical protein [Solanum moscopanum]
 gi|327187055|gb|AEA30932.1| hypothetical protein [Solanum piurae]
 gi|327187063|gb|AEA30936.1| hypothetical protein [Solanum schenckii]
 gi|327187069|gb|AEA30939.1| hypothetical protein [Solanum schenckii]
 gi|327187085|gb|AEA30947.1| hypothetical protein [Solanum schenckii]
 gi|327187091|gb|AEA30950.1| hypothetical protein [Solanum schenckii]
 gi|327187125|gb|AEA30967.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|301139164|gb|ADK65997.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139166|gb|ADK65998.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139168|gb|ADK65999.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139170|gb|ADK66000.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139174|gb|ADK66002.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139176|gb|ADK66003.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139178|gb|ADK66004.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139180|gb|ADK66005.1| COSII_At5g14320 [Solanum andreanum]
 gi|301139218|gb|ADK66024.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139220|gb|ADK66025.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139224|gb|ADK66027.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139226|gb|ADK66028.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139228|gb|ADK66029.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139234|gb|ADK66032.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139236|gb|ADK66033.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139238|gb|ADK66034.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139242|gb|ADK66036.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139244|gb|ADK66037.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139246|gb|ADK66038.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139254|gb|ADK66042.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139262|gb|ADK66046.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139264|gb|ADK66047.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139266|gb|ADK66048.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139362|gb|ADK66096.1| COSII_At5g14320 [Solanum huancabambense]
 gi|301139426|gb|ADK66128.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139428|gb|ADK66129.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139432|gb|ADK66131.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139462|gb|ADK66146.1| COSII_At5g14320 [Solanum minutifoliolum]
 gi|301139472|gb|ADK66151.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139500|gb|ADK66165.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139502|gb|ADK66166.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139504|gb|ADK66167.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139506|gb|ADK66168.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139508|gb|ADK66169.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139512|gb|ADK66171.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139514|gb|ADK66172.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139518|gb|ADK66174.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139520|gb|ADK66175.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139536|gb|ADK66183.1| COSII_At5g14320 [Solanum piurae]
 gi|301139542|gb|ADK66186.1| COSII_At5g14320 [Solanum piurae]
 gi|301139566|gb|ADK66198.1| COSII_At5g14320 [Solanum solisii]
 gi|301139584|gb|ADK66207.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139586|gb|ADK66208.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139588|gb|ADK66209.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139590|gb|ADK66210.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139592|gb|ADK66211.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139594|gb|ADK66212.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139596|gb|ADK66213.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139598|gb|ADK66214.1| COSII_At5g14320 [Solanum tuquerrense]
 gi|301139600|gb|ADK66215.1| COSII_At5g14320 [Solanum tuquerrense]
          Length = 77

 Score = 63.0 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|301139396|gb|ADK66113.1| COSII_At5g14320 [Solanum huarochiriense]
 gi|301139398|gb|ADK66114.1| COSII_At5g14320 [Solanum huarochiriense]
 gi|301139402|gb|ADK66116.1| COSII_At5g14320 [Solanum huarochiriense]
          Length = 77

 Score = 62.6 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139270|gb|ADK66050.1| COSII_At5g14320 [Solanum chancayense]
          Length = 77

 Score = 62.6 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDVS 77


>gi|301139212|gb|ADK66021.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 66

 Score = 62.6 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 66


>gi|301139484|gb|ADK66157.1| COSII_At5g14320 [Solanum marinasense]
          Length = 67

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 67


>gi|301139528|gb|ADK66179.1| COSII_At5g14320 [Solanum peloquinianum]
          Length = 77

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|327187121|gb|AEA30965.1| hypothetical protein [Solanum stoloniferum]
          Length = 73

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG   ++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 73


>gi|282931689|ref|ZP_06337181.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1]
 gi|281304187|gb|EFA96297.1| 30S ribosomal protein S13 [Lactobacillus jensenii 208-1]
          Length = 33

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 25/30 (83%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSS 30
          MARIAGV++PR KR+V AL YI+GIG  ++
Sbjct: 4  MARIAGVDLPREKRIVVALTYIYGIGEPTA 33


>gi|327186969|gb|AEA30889.1| hypothetical protein [Solanum hougasii]
 gi|327186975|gb|AEA30892.1| hypothetical protein [Solanum hougasii]
 gi|327186981|gb|AEA30895.1| hypothetical protein [Solanum hougasii]
 gi|327186987|gb|AEA30898.1| hypothetical protein [Solanum hougasii]
          Length = 73

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|301139446|gb|ADK66138.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 77

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 75


>gi|327186883|gb|AEA30846.1| hypothetical protein [Solanum colombianum]
          Length = 73

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|301139154|gb|ADK65992.1| COSII_At5g14320 [Solanum albornozii]
 gi|301139156|gb|ADK65993.1| COSII_At5g14320 [Solanum albornozii]
 gi|301139162|gb|ADK65996.1| COSII_At5g14320 [Solanum acroscopicum]
 gi|301139188|gb|ADK66009.1| COSII_At5g14320 [Solanum anamatophilum]
 gi|301139190|gb|ADK66010.1| COSII_At5g14320 [Solanum anamatophilum]
 gi|301139198|gb|ADK66014.1| COSII_At5g14320 [Solanum brevicaule]
 gi|301139274|gb|ADK66052.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139278|gb|ADK66054.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139282|gb|ADK66056.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139284|gb|ADK66057.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139286|gb|ADK66058.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139288|gb|ADK66059.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139290|gb|ADK66060.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139292|gb|ADK66061.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139294|gb|ADK66062.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139296|gb|ADK66063.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139298|gb|ADK66064.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139302|gb|ADK66066.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139306|gb|ADK66068.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139308|gb|ADK66069.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139310|gb|ADK66070.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139312|gb|ADK66071.1| COSII_At5g14320 [Solanum cajamarquense]
 gi|301139326|gb|ADK66078.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139330|gb|ADK66080.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139332|gb|ADK66081.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139336|gb|ADK66083.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139340|gb|ADK66085.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139342|gb|ADK66086.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139344|gb|ADK66087.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139346|gb|ADK66088.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139348|gb|ADK66089.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139350|gb|ADK66090.1| COSII_At5g14320 [Solanum dolichocremastrum]
 gi|301139404|gb|ADK66117.1| COSII_At5g14320 [Solanum infundibuliforme]
 gi|301139406|gb|ADK66118.1| COSII_At5g14320 [Solanum infundibuliforme]
 gi|301139408|gb|ADK66119.1| COSII_At5g14320 [Solanum infundibuliforme]
 gi|301139410|gb|ADK66120.1| COSII_At5g14320 [Solanum ingifolium]
 gi|301139412|gb|ADK66121.1| COSII_At5g14320 [Solanum immite]
 gi|301139418|gb|ADK66124.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139430|gb|ADK66130.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139436|gb|ADK66133.1| COSII_At5g14320 [Solanum kurtzianum]
 gi|301139438|gb|ADK66134.1| COSII_At5g14320 [Solanum limbaniense]
 gi|301139440|gb|ADK66135.1| COSII_At5g14320 [Solanum leptophyes]
 gi|301139442|gb|ADK66136.1| COSII_At5g14320 [Solanum leptophyes]
 gi|301139444|gb|ADK66137.1| COSII_At5g14320 [Solanum laxissimum]
 gi|301139464|gb|ADK66147.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139466|gb|ADK66148.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139476|gb|ADK66153.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139478|gb|ADK66154.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139480|gb|ADK66155.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139482|gb|ADK66156.1| COSII_At5g14320 [Solanum marinasense]
 gi|301139486|gb|ADK66158.1| COSII_At5g14320 [Solanum multiinterruptum]
 gi|301139488|gb|ADK66159.1| COSII_At5g14320 [Solanum multiinterruptum]
 gi|301139492|gb|ADK66161.1| COSII_At5g14320 [Solanum multiinterruptum]
 gi|301139494|gb|ADK66162.1| COSII_At5g14320 [Solanum olmosense]
 gi|301139532|gb|ADK66181.1| COSII_At5g14320 [Solanum peloquinianum]
 gi|301139534|gb|ADK66182.1| COSII_At5g14320 [Solanum peloquinianum]
 gi|301139546|gb|ADK66188.1| COSII_At5g14320 [Solanum sogarandinum]
 gi|301139550|gb|ADK66190.1| COSII_At5g14320 [Solanum sogarandinum]
 gi|301139552|gb|ADK66191.1| COSII_At5g14320 [Solanum sogarandinum]
 gi|301139554|gb|ADK66192.1| COSII_At5g14320 [Solanum sogarandinum]
 gi|301139556|gb|ADK66193.1| COSII_At5g14320 [Solanum sogarandinum]
 gi|301139560|gb|ADK66195.1| COSII_At5g14320 [Solanum simplicissimum]
 gi|301139602|gb|ADK66216.1| COSII_At5g14320 [Solanum urubambae]
 gi|301139604|gb|ADK66217.1| COSII_At5g14320 [Solanum verrucosum]
 gi|301139606|gb|ADK66218.1| COSII_At5g14320 [Solanum violaceimarmoratum]
 gi|301139608|gb|ADK66219.1| COSII_At5g14320 [Solanum yungasense]
          Length = 77

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|327186817|gb|AEA30813.1| hypothetical protein [Solanum acaule]
 gi|327186819|gb|AEA30814.1| hypothetical protein [Solanum acaule]
 gi|327186821|gb|AEA30815.1| hypothetical protein [Solanum acaule]
 gi|327186823|gb|AEA30816.1| hypothetical protein [Solanum acaule]
 gi|327186825|gb|AEA30817.1| hypothetical protein [Solanum acaule]
 gi|327186827|gb|AEA30818.1| hypothetical protein [Solanum acaule]
 gi|327186837|gb|AEA30823.1| hypothetical protein [Solanum albicans]
 gi|327186839|gb|AEA30824.1| hypothetical protein [Solanum albicans]
 gi|327186841|gb|AEA30825.1| hypothetical protein [Solanum albicans]
 gi|327186843|gb|AEA30826.1| hypothetical protein [Solanum albicans]
 gi|327186845|gb|AEA30827.1| hypothetical protein [Solanum albicans]
 gi|327186847|gb|AEA30828.1| hypothetical protein [Solanum albicans]
 gi|327186851|gb|AEA30830.1| hypothetical protein [Solanum albicans]
 gi|327186853|gb|AEA30831.1| hypothetical protein [Solanum albicans]
 gi|327186855|gb|AEA30832.1| hypothetical protein [Solanum albicans]
 gi|327186857|gb|AEA30833.1| hypothetical protein [Solanum albicans]
 gi|327186861|gb|AEA30835.1| hypothetical protein [Solanum avilesii]
 gi|327186865|gb|AEA30837.1| hypothetical protein [Solanum boliviense]
 gi|327186869|gb|AEA30839.1| hypothetical protein [Solanum chacoense]
 gi|327186877|gb|AEA30843.1| hypothetical protein [Solanum chiquidenum]
 gi|327186879|gb|AEA30844.1| hypothetical protein [Solanum cajamarquense]
 gi|327186885|gb|AEA30847.1| hypothetical protein [Solanum colombianum]
 gi|327186891|gb|AEA30850.1| hypothetical protein [Solanum demissum]
 gi|327186893|gb|AEA30851.1| hypothetical protein [Solanum demissum]
 gi|327186895|gb|AEA30852.1| hypothetical protein [Solanum demissum]
 gi|327186897|gb|AEA30853.1| hypothetical protein [Solanum demissum]
 gi|327186899|gb|AEA30854.1| hypothetical protein [Solanum demissum]
 gi|327186901|gb|AEA30855.1| hypothetical protein [Solanum demissum]
 gi|327186903|gb|AEA30856.1| hypothetical protein [Solanum demissum]
 gi|327186905|gb|AEA30857.1| hypothetical protein [Solanum demissum]
 gi|327186907|gb|AEA30858.1| hypothetical protein [Solanum demissum]
 gi|327186909|gb|AEA30859.1| hypothetical protein [Solanum demissum]
 gi|327186911|gb|AEA30860.1| hypothetical protein [Solanum demissum]
 gi|327186913|gb|AEA30861.1| hypothetical protein [Solanum demissum]
 gi|327186915|gb|AEA30862.1| hypothetical protein [Solanum demissum]
 gi|327186917|gb|AEA30863.1| hypothetical protein [Solanum demissum]
 gi|327186919|gb|AEA30864.1| hypothetical protein [Solanum demissum]
 gi|327186921|gb|AEA30865.1| hypothetical protein [Solanum demissum]
 gi|327186923|gb|AEA30866.1| hypothetical protein [Solanum demissum]
 gi|327186925|gb|AEA30867.1| hypothetical protein [Solanum demissum]
 gi|327186927|gb|AEA30868.1| hypothetical protein [Solanum demissum]
 gi|327186929|gb|AEA30869.1| hypothetical protein [Solanum demissum]
 gi|327186931|gb|AEA30870.1| hypothetical protein [Solanum demissum]
 gi|327186941|gb|AEA30875.1| hypothetical protein [Solanum hjertingii]
 gi|327186945|gb|AEA30877.1| hypothetical protein [Solanum hjertingii]
 gi|327186949|gb|AEA30879.1| hypothetical protein [Solanum hjertingii]
 gi|327186953|gb|AEA30881.1| hypothetical protein [Solanum hjertingii]
 gi|327186957|gb|AEA30883.1| hypothetical protein [Solanum hjertingii]
 gi|327186961|gb|AEA30885.1| hypothetical protein [Solanum hjertingii]
 gi|327186967|gb|AEA30888.1| hypothetical protein [Solanum hougasii]
 gi|327186973|gb|AEA30891.1| hypothetical protein [Solanum hougasii]
 gi|327186979|gb|AEA30894.1| hypothetical protein [Solanum hougasii]
 gi|327186991|gb|AEA30900.1| hypothetical protein [Solanum hougasii]
 gi|327186993|gb|AEA30901.1| hypothetical protein [Solanum infundibuliforme]
 gi|327186997|gb|AEA30903.1| hypothetical protein [Solanum iopetalum]
 gi|327186999|gb|AEA30904.1| hypothetical protein [Solanum iopetalum]
 gi|327187003|gb|AEA30906.1| hypothetical protein [Solanum iopetalum]
 gi|327187005|gb|AEA30907.1| hypothetical protein [Solanum iopetalum]
 gi|327187009|gb|AEA30909.1| hypothetical protein [Solanum iopetalum]
 gi|327187011|gb|AEA30910.1| hypothetical protein [Solanum iopetalum]
 gi|327187015|gb|AEA30912.1| hypothetical protein [Solanum iopetalum]
 gi|327187017|gb|AEA30913.1| hypothetical protein [Solanum iopetalum]
 gi|327187019|gb|AEA30914.1| hypothetical protein [Solanum iopetalum]
 gi|327187021|gb|AEA30915.1| hypothetical protein [Solanum iopetalum]
 gi|327187023|gb|AEA30916.1| hypothetical protein [Solanum iopetalum]
 gi|327187027|gb|AEA30918.1| hypothetical protein [Solanum iopetalum]
 gi|327187029|gb|AEA30919.1| hypothetical protein [Solanum iopetalum]
 gi|327187033|gb|AEA30921.1| hypothetical protein [Solanum iopetalum]
 gi|327187035|gb|AEA30922.1| hypothetical protein [Solanum iopetalum]
 gi|327187041|gb|AEA30925.1| hypothetical protein [Solanum microdontum]
 gi|327187047|gb|AEA30928.1| hypothetical protein [Solanum moscopanum]
 gi|327187053|gb|AEA30931.1| hypothetical protein [Solanum moscopanum]
 gi|327187057|gb|AEA30933.1| hypothetical protein [Solanum santolallae]
 gi|327187059|gb|AEA30934.1| hypothetical protein [Solanum santolallae]
 gi|327187065|gb|AEA30937.1| hypothetical protein [Solanum schenckii]
 gi|327187071|gb|AEA30940.1| hypothetical protein [Solanum schenckii]
 gi|327187077|gb|AEA30943.1| hypothetical protein [Solanum schenckii]
 gi|327187081|gb|AEA30945.1| hypothetical protein [Solanum schenckii]
 gi|327187087|gb|AEA30948.1| hypothetical protein [Solanum schenckii]
 gi|327187093|gb|AEA30951.1| hypothetical protein [Solanum schenckii]
 gi|327187095|gb|AEA30952.1| hypothetical protein [Solanum sparsipilum]
 gi|327187099|gb|AEA30954.1| hypothetical protein [Solanum stoloniferum]
 gi|327187103|gb|AEA30956.1| hypothetical protein [Solanum stoloniferum]
 gi|327187107|gb|AEA30958.1| hypothetical protein [Solanum stoloniferum]
 gi|327187111|gb|AEA30960.1| hypothetical protein [Solanum stoloniferum]
 gi|327187115|gb|AEA30962.1| hypothetical protein [Solanum stoloniferum]
 gi|327187117|gb|AEA30963.1| hypothetical protein [Solanum stoloniferum]
 gi|327187119|gb|AEA30964.1| hypothetical protein [Solanum stoloniferum]
 gi|327187127|gb|AEA30968.1| hypothetical protein [Solanum stoloniferum]
 gi|327187131|gb|AEA30970.1| hypothetical protein [Solanum stoloniferum]
 gi|327187133|gb|AEA30971.1| hypothetical protein [Solanum stoloniferum]
 gi|327187135|gb|AEA30972.1| hypothetical protein [Solanum stoloniferum]
 gi|327187139|gb|AEA30974.1| hypothetical protein [Solanum stoloniferum]
 gi|327187141|gb|AEA30975.1| hypothetical protein [Solanum tarijense]
 gi|327187143|gb|AEA30976.1| hypothetical protein [Solanum urubambae]
 gi|327187147|gb|AEA30978.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 73

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73


>gi|313509192|gb|ADR65906.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509196|gb|ADR65908.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509200|gb|ADR65910.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509206|gb|ADR65913.1| hypothetical protein [Solanum colombianum]
 gi|313509212|gb|ADR65916.1| hypothetical protein [Solanum colombianum]
 gi|313509214|gb|ADR65917.1| hypothetical protein [Solanum colombianum]
 gi|313509220|gb|ADR65920.1| hypothetical protein [Solanum colombianum]
 gi|313509222|gb|ADR65921.1| hypothetical protein [Solanum colombianum]
 gi|313509226|gb|ADR65923.1| hypothetical protein [Solanum colombianum]
 gi|313509232|gb|ADR65926.1| hypothetical protein [Solanum colombianum]
 gi|313509234|gb|ADR65927.1| hypothetical protein [Solanum colombianum]
 gi|313509236|gb|ADR65928.1| hypothetical protein [Solanum colombianum]
 gi|313509240|gb|ADR65930.1| hypothetical protein [Solanum colombianum]
 gi|313509242|gb|ADR65931.1| hypothetical protein [Solanum colombianum]
 gi|313509246|gb|ADR65933.1| hypothetical protein [Solanum colombianum]
 gi|313509250|gb|ADR65935.1| hypothetical protein [Solanum colombianum]
 gi|313509254|gb|ADR65937.1| hypothetical protein [Solanum flahaultii]
 gi|313509256|gb|ADR65938.1| hypothetical protein [Solanum flahaultii]
 gi|313509258|gb|ADR65939.1| hypothetical protein [Solanum flahaultii]
 gi|313509264|gb|ADR65942.1| hypothetical protein [Solanum garcia-barrigae]
 gi|313509266|gb|ADR65943.1| hypothetical protein [Solanum lobbianum]
 gi|313509270|gb|ADR65945.1| hypothetical protein [Solanum longiconicum]
 gi|313509274|gb|ADR65947.1| hypothetical protein [Solanum longiconicum]
 gi|313509280|gb|ADR65950.1| hypothetical protein [Solanum longiconicum]
 gi|313509296|gb|ADR65958.1| hypothetical protein [Solanum moscopanum]
 gi|313509298|gb|ADR65959.1| hypothetical protein [Solanum moscopanum]
 gi|313509302|gb|ADR65961.1| hypothetical protein [Solanum moscopanum]
 gi|313509306|gb|ADR65963.1| hypothetical protein [Solanum moscopanum]
 gi|313509308|gb|ADR65964.1| hypothetical protein [Solanum moscopanum]
 gi|313509310|gb|ADR65965.1| hypothetical protein [Solanum moscopanum]
 gi|313509312|gb|ADR65966.1| hypothetical protein [Solanum moscopanum]
 gi|313509316|gb|ADR65968.1| hypothetical protein [Solanum moscopanum]
 gi|313509318|gb|ADR65969.1| hypothetical protein [Solanum moscopanum]
 gi|313509328|gb|ADR65974.1| hypothetical protein [Solanum orocense]
 gi|313509330|gb|ADR65975.1| hypothetical protein [Solanum otites]
 gi|313509332|gb|ADR65976.1| hypothetical protein [Solanum oxycarpum]
 gi|313509336|gb|ADR65978.1| hypothetical protein [Solanum oxycarpum]
 gi|313509340|gb|ADR65980.1| hypothetical protein [Solanum oxycarpum]
 gi|313509356|gb|ADR65988.1| hypothetical protein [Solanum sucubunense]
 gi|313509358|gb|ADR65989.1| hypothetical protein [Solanum sucubunense]
 gi|313509360|gb|ADR65990.1| hypothetical protein [Solanum tundalomense]
 gi|313509366|gb|ADR65993.1| hypothetical protein [Solanum tundalomense]
 gi|313509368|gb|ADR65994.1| hypothetical protein [Solanum tundalomense]
 gi|313509372|gb|ADR65996.1| hypothetical protein [Solanum tundalomense]
 gi|313509376|gb|ADR65998.1| hypothetical protein [Solanum tundalomense]
 gi|313509378|gb|ADR65999.1| hypothetical protein [Solanum tundalomense]
 gi|313509420|gb|ADR66020.1| hypothetical protein [Solanum woodsonii]
          Length = 78

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78


>gi|301139458|gb|ADK66144.1| COSII_At5g14320 [Solanum mochiquense]
          Length = 76

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76


>gi|301139324|gb|ADK66077.1| COSII_At5g14320 [Solanum contumazaense]
          Length = 77

 Score = 62.6 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139564|gb|ADK66197.1| COSII_At5g14320 [Solanum simplicissimum]
          Length = 66

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 66


>gi|301139414|gb|ADK66122.1| COSII_At5g14320 [Solanum immite]
          Length = 77

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKMMKDMS 77


>gi|313509416|gb|ADR66018.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 78

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|551831|gb|AAA83903.1| ribosomal protein S13 [Escherichia coli]
 gi|554544|gb|AAA72457.1| S13 protein (gtg start codon) [synthetic construct]
          Length = 36

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 22/36 (61%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNK 36
          MARIAG+NIP  K  V AL  I+G+G   S+ I   
Sbjct: 1  MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAA 36


>gi|327187037|gb|AEA30923.1| hypothetical protein [Solanum lignicaule]
          Length = 73

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73


>gi|324537231|gb|ADY49494.1| 40S ribosomal protein S18 [Ascaris suum]
          Length = 91

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 40  LDNKLREDLERLKKIRLHRGLRHYWGLRVRGQHTKTTGRKGRTV---GVSKKK 89


>gi|301139240|gb|ADK66035.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 68

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG   ++ I   L +   + +  + 
Sbjct: 22 VRVGGVEVPNNKRVEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 68


>gi|313509338|gb|ADR65979.1| hypothetical protein [Solanum oxycarpum]
          Length = 78

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|301139150|gb|ADK65990.1| COSII_At5g14320 [Solanum albornozii]
 gi|301139152|gb|ADK65991.1| COSII_At5g14320 [Solanum albornozii]
 gi|301139194|gb|ADK66012.1| COSII_At5g14320 [Solanum x blanco-galdosii]
 gi|301139474|gb|ADK66152.1| COSII_At5g14320 [Solanum marinasense]
          Length = 77

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|313509224|gb|ADR65922.1| hypothetical protein [Solanum colombianum]
          Length = 78

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78


>gi|301139184|gb|ADK66007.1| COSII_At5g14320 [Solanum augustii]
          Length = 67

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 67


>gi|240276444|gb|EER39956.1| 40S ribosomal protein S18 [Ajellomyces capsulatus H143]
          Length = 77

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVH 46
          + R+   N+   ++++ AL  I G+G + S  +C K  +   +R+ 
Sbjct: 14 ILRLLNTNVDGKQKIMYALTKIKGVGRRYSNLVCKKADVDLNKRIG 59


>gi|238597051|ref|XP_002394222.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
 gi|215462901|gb|EEB95152.1| hypothetical protein MPER_05925 [Moniliophthora perniciosa FA553]
          Length = 79

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 62  QDYQV-EGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
           +DYQ+   ++   +  +++RL  +  +RGLRH  GL VRGQ T T  R  K     GV++
Sbjct: 20  KDYQILSTNVDSKLRDDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGKTV---GVSK 76

Query: 121 KR 122
           KR
Sbjct: 77  KR 78


>gi|313509190|gb|ADR65905.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509194|gb|ADR65907.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509198|gb|ADR65909.1| hypothetical protein [Solanum agrimonifolium]
 gi|313509208|gb|ADR65914.1| hypothetical protein [Solanum colombianum]
 gi|313509210|gb|ADR65915.1| hypothetical protein [Solanum colombianum]
 gi|313509216|gb|ADR65918.1| hypothetical protein [Solanum colombianum]
 gi|313509218|gb|ADR65919.1| hypothetical protein [Solanum colombianum]
 gi|313509228|gb|ADR65924.1| hypothetical protein [Solanum colombianum]
 gi|313509230|gb|ADR65925.1| hypothetical protein [Solanum colombianum]
 gi|313509238|gb|ADR65929.1| hypothetical protein [Solanum colombianum]
 gi|313509244|gb|ADR65932.1| hypothetical protein [Solanum colombianum]
 gi|313509248|gb|ADR65934.1| hypothetical protein [Solanum colombianum]
 gi|313509252|gb|ADR65936.1| hypothetical protein [Solanum colombianum]
 gi|313509260|gb|ADR65940.1| hypothetical protein [Solanum flahaultii]
 gi|313509262|gb|ADR65941.1| hypothetical protein [Solanum garcia-barrigae]
 gi|313509268|gb|ADR65944.1| hypothetical protein [Solanum lobbianum]
 gi|313509272|gb|ADR65946.1| hypothetical protein [Solanum longiconicum]
 gi|313509276|gb|ADR65948.1| hypothetical protein [Solanum longiconicum]
 gi|313509278|gb|ADR65949.1| hypothetical protein [Solanum longiconicum]
 gi|313509282|gb|ADR65951.1| hypothetical protein [Solanum limbaniense]
 gi|313509284|gb|ADR65952.1| hypothetical protein [Solanum limbaniense]
 gi|313509288|gb|ADR65954.1| hypothetical protein [Solanum limbaniense]
 gi|313509290|gb|ADR65955.1| hypothetical protein [Solanum limbaniense]
 gi|313509292|gb|ADR65956.1| hypothetical protein [Solanum limbaniense]
 gi|313509294|gb|ADR65957.1| hypothetical protein [Solanum laxissimum]
 gi|313509300|gb|ADR65960.1| hypothetical protein [Solanum moscopanum]
 gi|313509304|gb|ADR65962.1| hypothetical protein [Solanum moscopanum]
 gi|313509314|gb|ADR65967.1| hypothetical protein [Solanum moscopanum]
 gi|313509322|gb|ADR65971.1| hypothetical protein [Solanum moscopanum]
 gi|313509324|gb|ADR65972.1| hypothetical protein [Solanum nubicola]
 gi|313509326|gb|ADR65973.1| hypothetical protein [Solanum orocense]
 gi|313509334|gb|ADR65977.1| hypothetical protein [Solanum oxycarpum]
 gi|313509342|gb|ADR65981.1| hypothetical protein [Solanum pillahuatense]
 gi|313509344|gb|ADR65982.1| hypothetical protein [Solanum santolallae]
 gi|313509346|gb|ADR65983.1| hypothetical protein [Solanum santolallae]
 gi|313509348|gb|ADR65984.1| hypothetical protein [Solanum santolallae]
 gi|313509350|gb|ADR65985.1| hypothetical protein [Solanum santolallae]
 gi|313509352|gb|ADR65986.1| hypothetical protein [Solanum sucubunense]
 gi|313509362|gb|ADR65991.1| hypothetical protein [Solanum tundalomense]
 gi|313509370|gb|ADR65995.1| hypothetical protein [Solanum tundalomense]
 gi|313509374|gb|ADR65997.1| hypothetical protein [Solanum tundalomense]
 gi|313509380|gb|ADR66000.1| hypothetical protein [Solanum urubambae]
 gi|313509382|gb|ADR66001.1| hypothetical protein [Solanum urubambae]
 gi|313509384|gb|ADR66002.1| hypothetical protein [Solanum urubambae]
 gi|313509386|gb|ADR66003.1| hypothetical protein [Solanum urubambae]
 gi|313509388|gb|ADR66004.1| hypothetical protein [Solanum urubambae]
 gi|313509390|gb|ADR66005.1| hypothetical protein [Solanum urubambae]
 gi|313509392|gb|ADR66006.1| hypothetical protein [Solanum urubambae]
 gi|313509394|gb|ADR66007.1| hypothetical protein [Solanum urubambae]
 gi|313509396|gb|ADR66008.1| hypothetical protein [Solanum urubambae]
 gi|313509400|gb|ADR66010.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509404|gb|ADR66012.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509406|gb|ADR66013.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509408|gb|ADR66014.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509410|gb|ADR66015.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509412|gb|ADR66016.1| hypothetical protein [Solanum violaceimarmoratum]
 gi|313509418|gb|ADR66019.1| hypothetical protein [Solanum woodsonii]
          Length = 78

 Score = 62.2 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|301139380|gb|ADK66105.1| COSII_At5g14320 [Solanum hypacrarthrum]
          Length = 77

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139196|gb|ADK66013.1| COSII_At5g14320 [Solanum x blanco-galdosii]
          Length = 66

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 20 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 66


>gi|327186871|gb|AEA30840.1| hypothetical protein [Solanum chilliasense]
 gi|327186881|gb|AEA30845.1| hypothetical protein [Solanum cantense]
 gi|327186937|gb|AEA30873.1| hypothetical protein [Solanum hypacrarthrum]
          Length = 73

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73


>gi|301139304|gb|ADK66067.1| COSII_At5g14320 [Solanum cajamarquense]
          Length = 75

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 29 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 75


>gi|301139158|gb|ADK65994.1| COSII_At5g14320 [Solanum acroglossum]
 gi|301139182|gb|ADK66006.1| COSII_At5g14320 [Solanum augustii]
 gi|301139192|gb|ADK66011.1| COSII_At5g14320 [Solanum x blanco-galdosii]
 gi|301139208|gb|ADK66019.1| COSII_At5g14320 [Solanum chilliasense]
 gi|301139232|gb|ADK66031.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139250|gb|ADK66040.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139252|gb|ADK66041.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139256|gb|ADK66043.1| COSII_At5g14320 [Solanum chomatophilum]
 gi|301139280|gb|ADK66055.1| COSII_At5g14320 [Solanum chiquidenum]
 gi|301139314|gb|ADK66072.1| COSII_At5g14320 [Solanum cantense]
 gi|301139316|gb|ADK66073.1| COSII_At5g14320 [Solanum cantense]
 gi|301139318|gb|ADK66074.1| COSII_At5g14320 [Solanum cantense]
 gi|301139320|gb|ADK66075.1| COSII_At5g14320 [Solanum cantense]
 gi|301139322|gb|ADK66076.1| COSII_At5g14320 [Solanum cantense]
 gi|301139358|gb|ADK66094.1| COSII_At5g14320 [Solanum guzmanguense]
 gi|301139360|gb|ADK66095.1| COSII_At5g14320 [Solanum guzmanguense]
 gi|301139378|gb|ADK66104.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139382|gb|ADK66106.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139384|gb|ADK66107.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139386|gb|ADK66108.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139388|gb|ADK66109.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139390|gb|ADK66110.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139392|gb|ADK66111.1| COSII_At5g14320 [Solanum hypacrarthrum]
 gi|301139420|gb|ADK66125.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139422|gb|ADK66126.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139424|gb|ADK66127.1| COSII_At5g14320 [Solanum jalcae]
 gi|301139490|gb|ADK66160.1| COSII_At5g14320 [Solanum multiinterruptum]
 gi|301139510|gb|ADK66170.1| COSII_At5g14320 [Solanum paucijugum]
 gi|301139522|gb|ADK66176.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139524|gb|ADK66177.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139526|gb|ADK66178.1| COSII_At5g14320 [Solanum paucissectum]
 gi|301139530|gb|ADK66180.1| COSII_At5g14320 [Solanum peloquinianum]
 gi|301139538|gb|ADK66184.1| COSII_At5g14320 [Solanum piurae]
 gi|301139562|gb|ADK66196.1| COSII_At5g14320 [Solanum simplicissimum]
          Length = 77

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139300|gb|ADK66065.1| COSII_At5g14320 [Solanum cajamarquense]
          Length = 76

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 30 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 76


>gi|301139186|gb|ADK66008.1| COSII_At5g14320 [Solanum ambosinum]
 gi|301139206|gb|ADK66018.1| COSII_At5g14320 [Solanum bukasovii]
 gi|301139468|gb|ADK66149.1| COSII_At5g14320 [Solanum marinasense]
          Length = 77

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|327186867|gb|AEA30838.1| hypothetical protein [Solanum bukasovii]
          Length = 73

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 73


>gi|322699777|gb|EFY91536.1| 30S ribosomal protein S13 [Metarhizium acridum CQMa 102]
          Length = 119

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHR 93
            K +I    +V  L    V  +   + Q   +E D RR V  NI+RL D+G YRG RH 
Sbjct: 1  MAKYSIHKLAKVGSLSPRTVTSLTAELSQ-MTIETDARRIVQDNIRRLKDIGSYRGRRHA 59

Query: 94 RGLP 97
           GLP
Sbjct: 60 MGLP 63


>gi|109073538|ref|XP_001090113.1| PREDICTED: 40S ribosomal protein S18-like isoform 1 [Macaca
           mulatta]
 gi|297292185|ref|XP_002804033.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
 gi|66347229|emb|CAI95617.1| ribosomal protein S18 [Homo sapiens]
 gi|119600194|gb|EAW79788.1| hCG1777176, isoform CRA_a [Homo sapiens]
 gi|119624099|gb|EAX03694.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
 gi|119624102|gb|EAX03697.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
 gi|119624104|gb|EAX03699.1| ribosomal protein S18, isoform CRA_a [Homo sapiens]
 gi|149043392|gb|EDL96843.1| rCG60872, isoform CRA_b [Rattus norvegicus]
          Length = 82

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 33  LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 82


>gi|301139548|gb|ADK66189.1| COSII_At5g14320 [Solanum sogarandinum]
          Length = 77

 Score = 61.8 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139272|gb|ADK66051.1| COSII_At5g14320 [Solanum chancayense]
          Length = 77

 Score = 61.4 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHG+G  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGVGRTAARQILVDLQM-ENKVMKDMS 77


>gi|327186985|gb|AEA30897.1| hypothetical protein [Solanum hougasii]
          Length = 73

 Score = 61.4 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73


>gi|313509398|gb|ADR66009.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 78

 Score = 61.4 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|301139498|gb|ADK66164.1| COSII_At5g14320 [Solanum pascoense]
          Length = 77

 Score = 61.4 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139352|gb|ADK66091.1| COSII_At5g14320 [Solanum fernandezianum]
 gi|301139354|gb|ADK66092.1| COSII_At5g14320 [Solanum fernandezianum]
 gi|301139356|gb|ADK66093.1| COSII_At5g14320 [Solanum fernandezianum]
          Length = 77

 Score = 61.4 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|313509402|gb|ADR66011.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 78

 Score = 61.4 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KR+  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRLEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 78


>gi|301353227|ref|YP_003795224.1| ribosomal protein S13 [Proteromonas lacertae]
 gi|290573175|gb|ADD46362.1| ribosomal protein S13 [Proteromonas lacertae]
          Length = 129

 Score = 61.4 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 11/102 (10%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---EGDLRRTVA 75
           L  I+ I    +  ICNKL   P +++      ++  I + +    ++      ++    
Sbjct: 23  LTSIYSINLPKAIGICNKLGFNPNKQLK--TIKDIDFILKILSNFLKLVEKNDKIKSKKL 80

Query: 76  MNI------KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRK 111
            NI        L +    +  R + GLPV GQRTH+N +  K
Sbjct: 81  HNIETIAYLNNLKNTKNLKYYRLKNGLPVHGQRTHSNGQIAK 122


>gi|313509320|gb|ADR65970.1| hypothetical protein [Solanum moscopanum]
 gi|313509364|gb|ADR65992.1| hypothetical protein [Solanum tundalomense]
          Length = 78

 Score = 61.4 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ETKVMKDMS 78


>gi|301139160|gb|ADK65995.1| COSII_At5g14320 [Solanum acroglossum]
 gi|301139334|gb|ADK66082.1| COSII_At5g14320 [Solanum dolichocremastrum]
          Length = 76

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 75


>gi|327187039|gb|AEA30924.1| hypothetical protein [Solanum limbaniense]
          Length = 72

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 71


>gi|301139260|gb|ADK66045.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 75

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVVLQM-ENKVMKD 75


>gi|301139276|gb|ADK66053.1| COSII_At5g14320 [Solanum chiquidenum]
          Length = 77

 Score = 61.1 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|327186935|gb|AEA30872.1| hypothetical protein [Solanum gandarillasii]
          Length = 63

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 19 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 63


>gi|301139400|gb|ADK66115.1| COSII_At5g14320 [Solanum huarochiriense]
          Length = 77

 Score = 60.7 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|11465886|ref|NP_066435.1| ribosomal protein S13 [Ochromonas danica]
 gi|10505219|gb|AAG18401.1|AF287134_26 ribosomal protein S13 [Ochromonas danica]
          Length = 125

 Score = 60.7 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/49 (48%), Positives = 33/49 (67%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           ++ +  L+     NI  L++   YRG RH++ LPVRGQRTHTNA+T KK
Sbjct: 49  FKQDRVLKEFDKKNIDFLINNKSYRGSRHKKHLPVRGQRTHTNAKTIKK 97


>gi|327186889|gb|AEA30849.1| hypothetical protein [Solanum cardiophyllum]
          Length = 68

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 62


>gi|301139328|gb|ADK66079.1| COSII_At5g14320 [Solanum dolichocremastrum]
          Length = 75

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILGDLQM-ENKVMKD 75


>gi|222433587|gb|ACM51138.1| ribosomal protein S18 [Tetranychus cinnabarinus]
          Length = 87

 Score = 60.3 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 22/87 (25%)

Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ----------------------VEGDL 70
          +C K  +   +R  +L E EV ++   +    Q                          L
Sbjct: 1  VCKKADVDLNKRAGELTEEEVEKLVTIMSNPRQYKIPLWFLNRQRDIKDGKYSQVTSNSL 60

Query: 71 RRTVAMNIKRLMDLGCYRGLRHRRGLP 97
             +  +++RL  +  +RGLRH  GL 
Sbjct: 61 ETKIRDDLERLKKIKAHRGLRHFWGLR 87


>gi|67968820|dbj|BAE00767.1| unnamed protein product [Macaca fascicularis]
          Length = 82

 Score = 60.3 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  GL VRGQ T T  R        GV++K+
Sbjct: 33  LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGCTV---GVSKKK 82


>gi|301139394|gb|ADK66112.1| COSII_At5g14320 [Solanum humectophilum]
          Length = 77

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|301139204|gb|ADK66017.1| COSII_At5g14320 [Solanum buesii]
          Length = 77

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|327187145|gb|AEA30977.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 68

 Score = 59.9 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  +++ I   L
Sbjct: 27 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDL 62


>gi|327187075|gb|AEA30942.1| hypothetical protein [Solanum schenckii]
          Length = 73

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  +RV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 27 VRVGGVEVPNNERVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 73


>gi|301139496|gb|ADK66163.1| COSII_At5g14320 [Solanum pascoense]
          Length = 77

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDLQM-ENKVMKDMS 77


>gi|313509202|gb|ADR65911.1| hypothetical protein [Solanum buesii]
 gi|313509204|gb|ADR65912.1| hypothetical protein [Solanum buesii]
          Length = 78

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|301139258|gb|ADK66044.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 61

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 15 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 61


>gi|301139214|gb|ADK66022.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 71

 Score = 59.5 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 25 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 71


>gi|301139338|gb|ADK66084.1| COSII_At5g14320 [Solanum dolichocremastrum]
          Length = 77

 Score = 59.5 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 77


>gi|313509286|gb|ADR65953.1| hypothetical protein [Solanum limbaniense]
          Length = 78

 Score = 59.1 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KR   +L YIHGIG   ++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRXEFSLQYIHGIGRTXARQILVDLQM-ENKVMKDMS 78


>gi|301139568|gb|ADK66199.1| COSII_At5g14320 [Solanum solisii]
          Length = 77

 Score = 59.1 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHG G  S++ I   L +   + +  + 
Sbjct: 31 VRVGGVEVPNNKRVEFSLQYIHGXGRTSARQILVXLQM-ENKVMKDMS 77


>gi|313509354|gb|ADR65987.1| hypothetical protein [Solanum sucubunense]
          Length = 78

 Score = 58.7 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  S++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQIPVDLQM-ENKVMKDMS 78


>gi|125599287|gb|EAZ38863.1| hypothetical protein OsJ_23280 [Oryza sativa Japonica Group]
          Length = 78

 Score = 58.7 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           V   L   +  +++RL  +  +RGLRH  GL  RGQ T T  R  K     GV++KR
Sbjct: 25  VSNALDMKLRDDLERLKKIRNHRGLRHYWGLRDRGQHTKTTGRRGKTV---GVSKKR 78


>gi|327186863|gb|AEA30836.1| hypothetical protein [Solanum berthaultii]
          Length = 58

 Score = 58.7 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQ 47
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  
Sbjct: 14 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQM-ENKVMKD 58


>gi|327186873|gb|AEA30841.1| hypothetical protein [Solanum chomatophilum]
          Length = 57

 Score = 58.7 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  S++ I   L
Sbjct: 16 VRVGGVEVPNNKRVEFSLQYIHGIGRTSARQILVDL 51


>gi|313509414|gb|ADR66017.1| hypothetical protein [Solanum violaceimarmoratum]
          Length = 78

 Score = 58.7 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLV 49
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +   + +  + 
Sbjct: 32 VRVGGVEVPNNKRVGFSLQYIHGIGRTAARQILVDLQM-ENKVMKDMS 78


>gi|297292320|ref|XP_002804062.1| PREDICTED: 40S ribosomal protein S18-like [Macaca mulatta]
          Length = 82

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  GL VRGQ   T  R  +     GV++K+
Sbjct: 33  LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHAKTTGRCGRTV---GVSKKK 82


>gi|11467079|ref|NP_042555.1| ribosomal protein S13 [Acanthamoeba castellanii]
 gi|1173315|sp|P46760|RT13_ACACA RecName: Full=Ribosomal protein S13, mitochondrial
 gi|562060|gb|AAD11848.1| ribosomal protein S13 [Acanthamoeba castellanii]
          Length = 119

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70
           + K +  AL  IHG+  K    +   + +    +V  +       I++     Y +E + 
Sbjct: 15  KNKNIFSALKDIHGVNLKKINKMGLVMGLDKFEKVSSMNFELFSLIKKQAIFFYNLEENK 74

Query: 71  RRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNART 109
                   K++ +   Y G+RH   LPVRGQRTHTNA+T
Sbjct: 75  IFNNVNKKKKIKN---YTGMRHILKLPVRGQRTHTNAKT 110


>gi|327186995|gb|AEA30902.1| hypothetical protein [Solanum iopetalum]
          Length = 60

 Score = 58.4 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 22/36 (61%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG  +++ I   L
Sbjct: 17 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDL 52


>gi|218117290|emb|CAQ37772.1| 40S ribosomal protein S18 [Echinorhynchus truttae]
          Length = 62

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 15 VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
          +  AL  I GIG + S     K  I   +R  +L + EV ++   I   
Sbjct: 1  MPFALTAIKGIGLRFSHVAVAKAGIDVTKRAGELSDEEVERVIDVILNP 49


>gi|47570246|ref|ZP_00240897.1| 30S ribosomal protein s13 [Bacillus cereus G9241]
 gi|47553070|gb|EAL11470.1| 30S ribosomal protein s13 [Bacillus cereus G9241]
          Length = 30

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/29 (65%), Positives = 23/29 (79%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKS 29
          MARIAGV+IPR KRVV +L Y+ GIG  +
Sbjct: 1  MARIAGVDIPRDKRVVISLTYVFGIGRTT 29


>gi|75764943|ref|ZP_00744281.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
 gi|74487567|gb|EAO51445.1| SSU ribosomal protein S13P [Bacillus thuringiensis serovar
          israelensis ATCC 35646]
          Length = 30

 Score = 57.2 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/28 (67%), Positives = 22/28 (78%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFK 28
          MARIAGV+IPR KRVV +L Y+ GIG  
Sbjct: 1  MARIAGVDIPRDKRVVISLTYVFGIGRT 28


>gi|301139516|gb|ADK66173.1| COSII_At5g14320 [Solanum paucissectum]
          Length = 68

 Score = 56.8 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV  +L YIHGIG   ++ I   L
Sbjct: 22 VRVGGVEVPNNKRVEFSLQYIHGIGRTRARQILVDL 57


>gi|66771207|gb|AAY54915.1| IP07925p [Drosophila melanogaster]
          Length = 246

 Score = 56.8 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
          I G+G + S  +  K  +   +R  +  E EV ++   I    Q
Sbjct: 1  IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQ 44


>gi|76162952|gb|AAX30684.2| SJCHGC06893 protein [Schistosoma japonicum]
          Length = 62

 Score = 56.0 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 77  NIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +++RL  +  +RG+RH  GL VRGQ T T  R  +     GV+RK+
Sbjct: 20  DLERLKRMRSHRGIRHYWGLRVRGQHTKTTGRRGRTV---GVSRKK 62


>gi|157929908|gb|ABW04142.1| ribosomal protein S18 [Epinephelus coioides]
          Length = 50

 Score = 56.0 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 1   LDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTV---GVSKKK 50


>gi|158187838|gb|ABW23208.1| ribosomal protein rps18 [Eurythoe complanata]
          Length = 55

 Score = 56.0 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  +RGLRH  G+ VRGQ T T  R  +     GV++K+
Sbjct: 6   LDNKLREDLERLKKIRAHRGLRHFWGVRVRGQHTKTTGRRGRTV---GVSKKK 55


>gi|326559176|gb|ADZ95627.1| 40S ribosomal protein S18 [Nosema bombycis]
 gi|326559178|gb|ADZ95628.1| 40S ribosomal protein S18 [Nosema bombycis]
          Length = 115

 Score = 56.0 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 22/103 (21%)

Query: 28  KSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE----------------GDLR 71
           + S  IC +  +   RR  +L   E+ +I+ AI     V                     
Sbjct: 2   RMSTAICKRTGVGLTRRAGELSNEELEKIQNAILDPKSVGIPVEFFNYRRNPVDGTDTHL 61

Query: 72  RTVAMNIKRLMDLGCYRGLRHRR------GLPVRGQRTHTNAR 108
            +  ++ +  + L   + +RH R      GL V GQR+ +N R
Sbjct: 62  VSTKLDAEYRLMLERGKKIRHVRLCRIACGLKVHGQRSKSNGR 104


>gi|327186849|gb|AEA30829.1| hypothetical protein [Solanum albicans]
          Length = 54

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 25/43 (58%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERR 44
           R+ GV +P  KRV  +L YIHGIG  +++ I   L +  + +
Sbjct: 11 VRVGGVEVPNNKRVEFSLQYIHGIGRTAARQILVDLQMENKVK 53


>gi|240276443|gb|EER39955.1| ribosomal protein S13p/S18e [Ajellomyces capsulatus H143]
          Length = 51

 Score = 55.7 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +   +  +++RL  +  +RGLRH  GL VRGQ T T  R  +     GV++K+
Sbjct: 1   MESKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 50


>gi|143450|gb|AAA22706.1| ribosomal protein S13 [Bacillus subtilis]
          Length = 36

 Score = 55.3 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 26/36 (72%)

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           YRG+RHRRGLPVRGQ +  NARTRK   +    +K+
Sbjct: 1   YRGIRHRRGLPVRGQNSKNNARTRKGPRRTVANKKK 36


>gi|301139230|gb|ADK66030.1| COSII_At5g14320 [Solanum chomatophilum]
          Length = 49

 Score = 54.9 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSS 30
           R+ GV +P  KRV  +L YIHGIG  S+
Sbjct: 21 VRVGGVEVPNNKRVEFSLQYIHGIGRTSA 49


>gi|329905506|ref|ZP_08274145.1| hypothetical protein IMCC9480_2537 [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327547574|gb|EGF32375.1| hypothetical protein IMCC9480_2537 [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 30

 Score = 54.5 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSS 30
          MARIAGVNIP  +  V  L  I+G+G   +
Sbjct: 1  MARIAGVNIPNHQHTVIGLTAIYGVGRPRA 30


>gi|70938520|ref|XP_739923.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56517276|emb|CAH87495.1| hypothetical protein PC302493.00.0 [Plasmodium chabaudi chabaudi]
          Length = 50

 Score = 54.5 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 74  VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +  +++R+  +  +RGLRH  GL VRGQ T T  R  +     GVA+K+
Sbjct: 3   LREDLERMKKIRLHRGLRHHWGLRVRGQHTKTTGRRGRTV---GVAKKK 48


>gi|293343231|ref|XP_002725424.1| PREDICTED: ribosomal protein S18-like [Rattus norvegicus]
          Length = 61

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 69  DLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +L   +  +++RL  +  +RGLRH  GL VRG+ T T  R  +     GV++K+
Sbjct: 11  NLDNKLHEDLERLKKIRAHRGLRHFWGLRVRGRHTKTTGRRGRTV---GVSKKK 61


>gi|23464609|ref|NP_696977.1| ribosomal protein S13 [Monosiga brevicollis ATCC 50154]
 gi|23344072|gb|AAN28348.1| ribosomal protein S13 [Monosiga brevicollis]
          Length = 166

 Score = 54.1 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 49/151 (32%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--------------------- 57
           L  I G+G     +IC  L I P     +L E  + ++                      
Sbjct: 16  LLKIKGLGKFKIFNICQILGINPNIEYSKLSEHYIDELNLLLANIKKQDYNSILENVNID 75

Query: 58  --------QAIEQDYQ--------------------VEGDLRRTVAMNIKRLMDLGCYRG 89
                   + I+++                      +E +L    +  I  L+ +   RG
Sbjct: 76  NTNTRINNKNIDKNKLNLYLFNKNSTFNKSTKNIVLIEENLNDYESSQINTLIQINALRG 135

Query: 90  LRHRRGLPVRGQRTHTNARTRKKFGKGGVAR 120
            R + G P +GQRT +NA T K+  K  + +
Sbjct: 136 RRIKMGYPSKGQRTRSNAITAKRINKRLIKK 166


>gi|224062852|ref|XP_002300902.1| predicted protein [Populus trichocarpa]
 gi|222842628|gb|EEE80175.1| predicted protein [Populus trichocarpa]
          Length = 126

 Score = 53.7 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 25/107 (23%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQ- 65
           + AL  I GIG + +  +C K  +   +R H          +   +   +   +    Q 
Sbjct: 1   MFALTSIKGIGRRFANIVCKKADVDMNKRSHSPSLSVLFWLVNYPQQSNLMTIVANPCQF 60

Query: 66  -------------VEGDLRRTVA--MNIKRLMDLGCYRGLRHRRGLP 97
                         +G   + V+  +++K   DL C + +R     P
Sbjct: 61  KIPDWFLNRQKDYTDGKYSQVVSNALDMKLRDDLECLKKIRQELDFP 107


>gi|70909573|emb|CAJ17223.1| ribosomal protein S18e [Eucinetus sp. APV-2005]
          Length = 49

 Score = 53.7 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
            +  +++R+  +  +RG+RH  GL VRGQ T T  R  +     GV++K+
Sbjct: 3   KLREDLERMKKIRAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 49


>gi|10242302|gb|AAG15373.1| ribosomal protein S18 [Anopheles gambiae]
          Length = 46

 Score = 53.4 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 74  VAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +  +++RL  +  +RG+RH  GL VRGQ T T  R  +     GV++K+
Sbjct: 1   LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTGRRGRTV---GVSKKK 46


>gi|88799197|ref|ZP_01114777.1| 30S ribosomal protein S13 [Reinekea sp. MED297]
 gi|88778180|gb|EAR09375.1| 30S ribosomal protein S13 [Reinekea sp. MED297]
          Length = 35

 Score = 52.2 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/33 (66%), Positives = 23/33 (69%)

Query: 85  GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGG 117
           G YRG+RHRR LPVRGQ T  NARTRK   K  
Sbjct: 1   GLYRGIRHRRNLPVRGQNTKNNARTRKGPKKPI 33


>gi|300174376|gb|ADJ68156.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174378|gb|ADJ68157.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174380|gb|ADJ68158.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174382|gb|ADJ68159.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174384|gb|ADJ68160.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174386|gb|ADJ68161.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174388|gb|ADJ68162.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174390|gb|ADJ68163.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174392|gb|ADJ68164.1| putative RpS18 protein [Cecidostiba fungosa]
 gi|300174394|gb|ADJ68165.1| putative RpS18 protein [Caenacis lauta]
          Length = 85

 Score = 51.8 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 22/85 (25%)

Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ---------------- 65
          I G+G + +  +  K  I  ++R  +  E EV +I   +    Q                
Sbjct: 1  IKGVGRRYANIVLKKADIDLDKRAGECSEEEVEKIVTIMANPRQYKIPDWFLNRQKDIVD 60

Query: 66 ------VEGDLRRTVAMNIKRLMDL 84
                   +L   +  +++R+  +
Sbjct: 61 GKYSQLTSSNLDSKLREDLERMKKI 85


>gi|114612284|ref|XP_001153245.1| PREDICTED: similar to ribosomal protein isoform 1 [Pan troglodytes]
 gi|114612286|ref|XP_527678.2| PREDICTED: similar to ribosomal protein isoform 2 [Pan troglodytes]
          Length = 89

 Score = 51.4 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 70  LRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           L   +  +++RL  +  ++GLRH  GL V+GQ T T        G  GV +K+
Sbjct: 41  LDNKLHEDLERLKKIQVHKGLRHFWGLCVQGQHTKTTGCR----GHVGVTKKK 89


>gi|327187031|gb|AEA30920.1| hypothetical protein [Solanum iopetalum]
          Length = 52

 Score = 50.7 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
           R+ GV +P  KRV   L +IHGIG  +++ I   L
Sbjct: 9  VRVGGVEVPNNKRVEFYLQHIHGIGRTAARQILVDL 44


>gi|302839950|ref|XP_002951531.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f.
          nagariensis]
 gi|300263140|gb|EFJ47342.1| hypothetical protein VOLCADRAFT_61524 [Volvox carteri f.
          nagariensis]
          Length = 81

 Score = 49.9 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 3  RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAI 39
          R+   N+    +++ A+  I GIG +  + +C K  +
Sbjct: 15 RLLNTNVDGKNKIMYAMTAIKGIGRRFPKQVCKKAEV 51


>gi|149506329|ref|XP_001515057.1| PREDICTED: similar to ribosomal protein s18, putative, partial
          [Ornithorhynchus anatinus]
          Length = 50

 Score = 49.5 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 1  MARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKL 37
          + RI   N+   ++VV AL  I GIG + +  +C + 
Sbjct: 14 ILRILNTNVKGHEKVVIALTAIRGIGRRMATVVCKEA 50


>gi|1086185|pir||S51064 ribosomal protein S13 - Thermus aquaticus (fragment)
          Length = 24

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/24 (75%), Positives = 19/24 (79%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGI 25
          ARIAGV IPR KRV  AL YI+GI
Sbjct: 1  ARIAGVEIPRNKRVDVALTYIYGI 24


>gi|160948222|emb|CAO94712.1| putative ribosomal protein S18 [Pomphorhynchus laevis]
          Length = 78

 Score = 48.0 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 66  VEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
               L   +  +++RL  +  +RGLRH     VRGQ T  + R  +     GV++ +
Sbjct: 25  TSNVLDVRLREDLERLKKMRVHRGLRHYWNTRVRGQHTRNSGRRGRTV---GVSKTK 78


>gi|7525003|ref|NP_050101.1| ribosomal protein S13 [Dictyostelium discoideum]
 gi|74833664|sp|O21038|RT13_DICDI RecName: Full=Ribosomal protein S13, mitochondrial
 gi|2627258|dbj|BAA23575.1| ribosomal protein S13 [Dictyostelium discoideum]
 gi|4958906|dbj|BAA78083.1| ribosomal protein S13 [Dictyostelium discoideum]
          Length = 169

 Score = 47.6 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I  + +   K+++  L   I G+ F  +Q +          + ++L++SE  QI   +++
Sbjct: 5   IGKIELNNEKQIIGELKKKIKGVNFHIAQKVIMLSGNVASIKGNKLIQSEEKQIVDILQR 64

Query: 63  DYQVEGDLRRTVAMNIKRLMDL-GCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARK 121
              +           + ++  +   YR +R R+G PVRG RT +NA T K+        K
Sbjct: 65  FKGLYSHNYGLKEEALAKIRRIENVYRYIRVRQGYPVRG-RTKSNANTVKRQRNVSTGVK 123


>gi|8928596|ref|NP_059401.1| ribosomal protein S13 [Paramecium aurelia]
          Length = 244

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           A NI     +  YR  RH +GLP RGQRT +NA
Sbjct: 81  AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNA 113


>gi|141013|sp|P15609|YM08_PARTE RecName: Full=Uncharacterized mitochondrial protein ORF8
 gi|578757|emb|CAA34049.1| unnamed protein product [Paramecium aurelia]
          Length = 241

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 75  AMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
           A NI     +  YR  RH +GLP RGQRT +NA
Sbjct: 78  AANIVTANIIWSYRSWRHFKGLPCRGQRTWSNA 110


>gi|3024756|sp|O05207|TOP6B_SULSH RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|167745001|pdb|2ZBK|B Chain B, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
           Insights Into Dna Transfer Mechanisms
 gi|167745003|pdb|2ZBK|D Chain D, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
           Insights Into Dna Transfer Mechanisms
 gi|167745005|pdb|2ZBK|F Chain F, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
           Insights Into Dna Transfer Mechanisms
 gi|167745007|pdb|2ZBK|H Chain H, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
           Insights Into Dna Transfer Mechanisms
 gi|1926403|emb|CAA71604.1| type II DNA topoisomerase subunit B [Sulfolobus shibatae B12]
          Length = 530

 Score = 47.2 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           IG  ++  I     + P ++V  L E E+ ++ +  ++D
Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKD 303


>gi|156042836|ref|XP_001587975.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980]
 gi|154695602|gb|EDN95340.1| hypothetical protein SS1G_11217 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 37

 Score = 46.8 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 84  LGCYRGLRHRRGLPVRGQRTHTNARTRKKFGK 115
           +G YRG RH  GLPVRGQ T     T +K  K
Sbjct: 1   MGSYRGRRHAMGLPVRGQNTKGQISTARKLNK 32


>gi|297794287|ref|XP_002865028.1| hypothetical protein ARALYDRAFT_920003 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297310863|gb|EFH41287.1| hypothetical protein ARALYDRAFT_920003 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 57

 Score = 46.8 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 2  ARIAGVNIPRAKRVVRALCYIHGI 25
          AR+ GV IP  KR+  +L YIHGI
Sbjct: 33 ARVGGVEIPVNKRIEYSLQYIHGI 56


>gi|302835644|ref|XP_002949383.1| mitochondrial ribosomal protein S13 [Volvox carteri f. nagariensis]
 gi|300265210|gb|EFJ49402.1| mitochondrial ribosomal protein S13 [Volvox carteri f. nagariensis]
          Length = 195

 Score = 46.0 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%)

Query: 35  NKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRR 94
               I  + +V  + E+ + ++   IE ++     LRR +  N+   + +   RG+ H +
Sbjct: 115 EACGISKDLKVKDIKETYLQKVASYIEANFVTGDALRRQIRENVAAEVAINSQRGMHHMQ 174


>gi|299830268|ref|YP_003734432.1| ribosomal protein S13 [Paramecium caudatum]
 gi|299507827|emb|CAZ66811.1| ribosomal protein S13 [Paramecium caudatum]
          Length = 244

 Score = 46.0 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           Y+G RH +GLP RGQRT +NA +  K        K+
Sbjct: 93  YKGWRHFKGLPCRGQRTWSNAWSSYKSNLVLRDYKK 128


>gi|28373795|pdb|1MU5|A Chain A, Structure Of Topoisomerase Subunit
          Length = 471

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 266 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 303


>gi|71042168|pdb|1Z5A|A Chain A, Topoisomerase Vi-B, Adp-Bound Dimer Form
 gi|71042169|pdb|1Z5A|B Chain B, Topoisomerase Vi-B, Adp-Bound Dimer Form
 gi|71042170|pdb|1Z5B|A Chain A, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
 gi|71042171|pdb|1Z5B|B Chain B, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form
 gi|114794402|pdb|2HKJ|A Chain A, Topoisomerase Vi-B Bound To Radicicol
          Length = 469

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 264 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 301


>gi|227827528|ref|YP_002829308.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.14.25]
 gi|227830215|ref|YP_002831995.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus L.S.2.15]
 gi|229579030|ref|YP_002837428.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.G.57.14]
 gi|229584731|ref|YP_002843233.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.27]
 gi|238619685|ref|YP_002914511.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.4]
 gi|284997638|ref|YP_003419405.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5]
 gi|259533989|sp|C3N5B3|TOP6B_SULIA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|259533992|sp|C4KGX9|TOP6B_SULIK RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|259533995|sp|C3MPN7|TOP6B_SULIL RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|259533998|sp|C3MYN1|TOP6B_SULIM RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|259534004|sp|C3NDW7|TOP6B_SULIY RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|227456663|gb|ACP35350.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.S.2.15]
 gi|227459324|gb|ACP38010.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.14.25]
 gi|228009744|gb|ACP45506.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.G.57.14]
 gi|228019781|gb|ACP55188.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.27]
 gi|238380755|gb|ACR41843.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.4]
 gi|284445533|gb|ADB87035.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5]
 gi|323474579|gb|ADX85185.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus REY15A]
 gi|323477311|gb|ADX82549.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus HVE10/4]
          Length = 530

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 302


>gi|229582219|ref|YP_002840618.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.N.15.51]
 gi|259534001|sp|C3NHT6|TOP6B_SULIN RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|228012935|gb|ACP48696.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.N.15.51]
          Length = 530

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 265 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 302


>gi|71042167|pdb|1Z59|A Chain A, Topoisomerase Vi-B, Adp-Bound Monomer Form
 gi|71042172|pdb|1Z5C|A Chain A, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
 gi|71042173|pdb|1Z5C|B Chain B, Topoisomerase Vi-B, Adp Pi Bound Dimer Form
          Length = 469

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 264 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 301


>gi|28373805|pdb|1MX0|A Chain A, Structure Of Topoisomerase Subunit
 gi|28373806|pdb|1MX0|B Chain B, Structure Of Topoisomerase Subunit
 gi|28373807|pdb|1MX0|C Chain C, Structure Of Topoisomerase Subunit
 gi|28373808|pdb|1MX0|D Chain D, Structure Of Topoisomerase Subunit
 gi|28373809|pdb|1MX0|E Chain E, Structure Of Topoisomerase Subunit
 gi|28373810|pdb|1MX0|F Chain F, Structure Of Topoisomerase Subunit
          Length = 472

 Score = 45.6 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     + P ++V  L E E+ ++ +  ++
Sbjct: 267 IGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKK 304


>gi|11466475|ref|NP_038178.1| ribosomal protein S13 [Chrysodidymus synuroideus]
 gi|7110472|gb|AAF36944.1|AF222718_18 ribosomal protein S13 [Chrysodidymus synuroideus]
          Length = 112

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)

Query: 79  KRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKF-----GKGGVARK 121
                +  Y+  R+  G P+RGQRTHTNA+T+KKF      K   ++K
Sbjct: 62  NFFYKIKNYKNFRNLLGYPIRGQRTHTNAKTKKKFKFSPKNKYTFSKK 109


>gi|87043036|ref|YP_492650.1| ribosomal protein S13 [Dictyostelium citrinum]
 gi|122000099|sp|Q2LCP2|RT13_DICCI RecName: Full=Ribosomal protein S13, mitochondrial
 gi|84682136|gb|ABC60401.1| ribosomal protein S13 [Dictyostelium citrinum]
          Length = 170

 Score = 45.3 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 4   IAGVNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I  + +   K+++  L   I GI    +Q +          + + L++S+  QI + ++ 
Sbjct: 5   IGKIELNSEKQIIGELKKKIKGINLNVAQKVIMLSGNVASLKGNTLLKSQEKQILEILQS 64

Query: 63  D---YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVA 119
               Y     L+      I+RL ++  YR +R  +G P++G RT +NA T K+    G  
Sbjct: 65  FKGLYDYTYGLKVEALDKIRRLENV--YRYIRVIKGYPIKG-RTKSNANTAKRQASPGGN 121

Query: 120 RK 121
           +K
Sbjct: 122 KK 123


>gi|315427275|dbj|BAJ48887.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 628

 Score = 44.9 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           ++     VV AL    G+G K ++++  +  +   +RV QL + EV ++   
Sbjct: 167 DLNPKTGVVVALARDLGLGGKFAEELVARAGLDKNKRVEQLSDEEVNRLNTV 218


>gi|269986392|gb|EEZ92683.1| 30S ribosomal protein S13P [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 101

 Score = 44.5 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 64  YQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHT---NARTRKKFGKGGVAR 120
           + +  +LR    M I+++     Y+G RH     +RGQ+  +   N   R     G V +
Sbjct: 33  HLLSNELRSKTTMQIQKIKTSRSYKGYRHSFSYKLRGQKVRSRGANVHGRVGSSLGVVRK 92

Query: 121 K 121
           K
Sbjct: 93  K 93


>gi|225680884|gb|EEH19168.1| 40S ribosomal protein S13 [Paracoccidioides brasiliensis Pb03]
          Length = 105

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 34 CNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYR 88
            +  +    ++  L   +++ +  A+ +  ++E DLRR +  +I+RL D+G  R
Sbjct: 1  MARFYVHETAKIGDLGNKQILSLTAALSE-MKIENDLRRQILDDIQRLKDIGTVR 54


>gi|301500879|ref|YP_003795291.1| ribosomal protein S13 [Chromera velia]
 gi|300069425|gb|ADJ66533.1| ribosomal protein S13 [Chromera velia]
          Length = 123

 Score = 44.5 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 53  VIQIRQAIEQ-DYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNAR-TR 110
           + +I + + + ++ +    R     +I+ L +    R LR  +GLPVRGQ+T  N R TR
Sbjct: 59  LKRISRVLRKINFCLRDKWRLAQKKHIQYLKETRLIRILRSEKGLPVRGQKTKNNHRTTR 118

Query: 111 KKFG 114
           KK  
Sbjct: 119 KKLN 122


>gi|15897847|ref|NP_342452.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus P2]
 gi|284175656|ref|ZP_06389625.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus 98/2]
 gi|21264094|sp|Q97ZF0|TOP6B_SULSO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|13814150|gb|AAK41242.1| DNA topoisomerase VI subunit B (top6B) [Sulfolobus solfataricus P2]
 gi|261602555|gb|ACX92158.1| DNA topoisomerase VI, B subunit [Sulfolobus solfataricus 98/2]
          Length = 530

 Score = 44.1 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I   + + P ++V  L E E+ ++ +  ++
Sbjct: 265 IGDTTADKILELVGLRPNKKVKNLTEEEITRLVETFKK 302


>gi|302531490|ref|ZP_07283832.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4]
 gi|302440385|gb|EFL12201.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. AA4]
          Length = 286

 Score = 43.7 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 14  RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD- 69
           R+  AL     I GIG   S +I ++  + P   V +L E  +  + +AI +   VE D 
Sbjct: 160 RLKWALTDQSLIAGIGNAYSDEIMHRAKLSPYATVGKLDEGALEVLAEAIRE---VETDA 216

Query: 70  LRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
           + R+V     RL       GLR H R GLP 
Sbjct: 217 VSRSVGQKAARLKGEKR-SGLRVHARTGLPC 246


>gi|147921120|ref|YP_685069.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic
           archaeon RC-I]
 gi|56295548|emb|CAH04791.1| formamidopyrimidine-DNA glycosylase [uncultured archaeon]
 gi|110620465|emb|CAJ35743.1| formamidopyrimidine-DNA glycosylase [uncultured methanogenic
           archaeon RC-I]
          Length = 269

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           I GIG   +QDI     + P+R+V QL + E+ ++ ++I  +  
Sbjct: 167 IAGIGNVYAQDILFTARLHPDRKVRQLSDDEIERLFKSIIGNLH 210


>gi|284047823|ref|YP_003398162.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM
           20731]
 gi|283952044|gb|ADB46847.1| formamidopyrimidine-DNA glycosylase [Acidaminococcus fermentans DSM
           20731]
          Length = 273

 Score = 43.7 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLRRTVAMN 77
           I G+G   + +      I P RRV++L   E   +    R  I Q  +  G   R     
Sbjct: 168 IAGLGNIYADEALFAAGIRPTRRVNRLTRKEWEALTLGVRAVIHQGLEHHGTTFRNYQDA 227

Query: 78  IKRLMDLGCYRGLRHRRGLPVR 99
             ++ D   Y  + HR+GLP R
Sbjct: 228 DGKMGDNSRYLQVYHRKGLPCR 249


>gi|146304517|ref|YP_001191833.1| DNA topoisomerase VI subunit B [Metallosphaera sedula DSM 5348]
 gi|259533984|sp|A4YHK7|TOP6B_METS5 RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|145702767|gb|ABP95909.1| DNA topoisomerase VI, B subunit [Metallosphaera sedula DSM 5348]
          Length = 531

 Score = 43.3 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 22/38 (57%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           +G K++  +     + P++RV +L + ++ ++  A++ 
Sbjct: 265 VGEKTALSVIEMAGLDPDKRVQKLTDDQLSKLVDAMKN 302


>gi|145352879|ref|XP_001420761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580996|gb|ABO99054.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 277

 Score = 43.0 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           I GIG   + +I  +  + PE R ++L  +++  IR  + +  +V
Sbjct: 182 IAGIGNWMADEILYRARVHPETRANELSSTQLEAIRFRVTEVVKV 226


>gi|50365398|ref|YP_053823.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1]
 gi|50363954|gb|AAT75939.1| formamidopyrimidine-DNA glycosylase [Mesoplasma florum L1]
          Length = 275

 Score = 42.6 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   + +I     I PER    L + E+ +I
Sbjct: 172 GIGNIYANEILFAAGINPERITKTLTDEELKKI 204


>gi|256811227|ref|YP_003128596.1| Fibronectin-binding A domain protein [Methanocaldococcus fervens
           AG86]
 gi|256794427|gb|ACV25096.1| Fibronectin-binding A domain protein [Methanocaldococcus fervens
           AG86]
          Length = 671

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   +++IC +  I   ++   L E E+  +
Sbjct: 197 IFGIGGLYAEEICERAGID--KKKKDLNEDEIKNL 229


>gi|123507646|ref|XP_001329464.1| 30S ribosomal protein S13P [Trichomonas vaginalis G3]
 gi|121912419|gb|EAY17241.1| 30S ribosomal protein S13P, putative [Trichomonas vaginalis G3]
          Length = 71

 Score = 42.2 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKKFGKG 116
           R   +  + V  DL   +   I+ +  +   RG+RH  GL V GQ T +  R     G  
Sbjct: 8   RATGQNTHWVATDLGANIHAEIEHMKKMRMKRGIRHGLGLKVCGQCTKSIGRRG---GAL 64

Query: 117 GVARKR 122
           GV RK+
Sbjct: 65  GVERKK 70


>gi|60117130|ref|YP_209593.1| ribosomal protein S13 [Polysphondylium pallidum]
 gi|51339694|gb|AAU00608.1| ribosomal protein S13 [Polysphondylium pallidum]
          Length = 148

 Score = 42.2 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 1   MARIAGVNIPRAKRVVRALCYIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           M  I    I   K+ V     I     G  +  +  +C+   + P    ++L  +  +++
Sbjct: 1   MVIILDQIILNEKKKVI--QEIKKEVPGFNYTLAAKLCSLCGLLPNTYGYKLSTNLSLKL 58

Query: 57  RQAIEQDYQVEGDLR---RTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            + I Q Y+   D          N  R  D   YR LR+++G PV  QRT +NA+T  K
Sbjct: 59  MR-IFQTYKGLYDFSFFSYKKMFNTLRNKD-KAYRNLRYKKGYPVN-QRTRSNAKTAAK 114


>gi|218884530|ref|YP_002428912.1| DNA topoisomerase VI subunit B [Desulfurococcus kamchatkensis
           1221n]
 gi|218766146|gb|ACL11545.1| Type 2 DNA topoisomerase VI subunit B [Desulfurococcus
           kamchatkensis 1221n]
          Length = 530

 Score = 42.2 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 6   GVNIPRAKRVVRALCY-------IHG---IGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           GV++   K+++ +  Y       I G   IG  +++ I  +  I P + + +L ++E++ 
Sbjct: 237 GVDLELLKQIISSHNYTSVEELLIKGFQSIGEATAKSILQQAGIDPGKPISELSDNELLS 296

Query: 56  IRQAI 60
           +   +
Sbjct: 297 LVNTL 301


>gi|296242525|ref|YP_003650012.1| DNA topoisomerase VI subunit B [Thermosphaera aggregans DSM 11486]
 gi|296095109|gb|ADG91060.1| DNA topoisomerase VI, B subunit [Thermosphaera aggregans DSM 11486]
          Length = 532

 Score = 41.4 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +G  ++ ++ N+  + P +    L E E+++I  AI
Sbjct: 268 VGESTATEVLNRAGVDPSKPAGSLGEDELLRIVNAI 303


>gi|261884953|ref|ZP_06008992.1| hypothetical protein CfetvA_06945 [Campylobacter fetus subsp.
          venerealis str. Azul-94]
          Length = 29

 Score = 41.4 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/27 (74%), Positives = 22/27 (81%)

Query: 65 QVEGDLRRTVAMNIKRLMDLGCYRGLR 91
           VEGDL  +VAM+IK LMDLG YRGLR
Sbjct: 1  MVEGDLTESVAMDIKALMDLGSYRGLR 27


>gi|295132006|ref|YP_003582682.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
 gi|294980021|gb|ADF50486.1| formamidopyrimidine-DNA glycosylase [Zunongwangia profunda SM-A87]
          Length = 263

 Score = 40.6 bits (95), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73
           I GIG   + ++  +  I P+ +V+ L + ++  I   IE+  +V  + R  
Sbjct: 163 IAGIGNMYADEVLFQTKIHPKTKVNTLSQKQLKSIFDKIEEVLKVVKEARIE 214


>gi|15921560|ref|NP_377229.1| DNA topoisomerase VI subunit B [Sulfolobus tokodaii str. 7]
 gi|28380202|sp|Q971T2|TOP6B_SULTO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|15622346|dbj|BAB66338.1| 532aa long hypothetical type II DNA topoisomerase VI subunit B
           [Sulfolobus tokodaii str. 7]
          Length = 532

 Score = 40.6 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 21/38 (55%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++  I     +P +++  +L + E+ ++ + +++
Sbjct: 264 IGDVTADKILEMAKLPKDKKTTELTDEEISRLVEVMKK 301


>gi|330834338|ref|YP_004409066.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4]
 gi|329566477|gb|AEB94582.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4]
          Length = 531

 Score = 40.3 bits (94), Expect = 0.084,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 23/38 (60%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           +G K++ ++     + P+++V +L + ++ ++  A++ 
Sbjct: 265 VGEKTALNVIEMAGLDPDKKVQKLPDDQLSKLVDAMKN 302


>gi|72014940|ref|XP_781179.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115935269|ref|XP_001182501.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 429

 Score = 40.3 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 21  YIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTV 74
            ++GIG   +      I     + PE ++  L +  +     A  + QD  +  DL  T+
Sbjct: 302 SVNGIGTARAIAKVYGILAAGGVDPETKLKLLSKERIDAFMNASTVTQDEVLGFDLSHTL 361

Query: 75  AMNIKRLMDLGCYRGLRH 92
            M   + +  G   G  H
Sbjct: 362 GMVTTKYVMNGSVMGFGH 379


>gi|239945857|ref|ZP_04697794.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
           roseosporus NRRL 15998]
 gi|239992325|ref|ZP_04712989.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
           roseosporus NRRL 11379]
 gi|291449313|ref|ZP_06588703.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL
           15998]
 gi|291352260|gb|EFE79164.1| formamidopyrimidine-DNA glycosylase [Streptomyces roseosporus NRRL
           15998]
          Length = 286

 Score = 40.3 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 9/63 (14%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI--------RQAIEQDYQVE-GDLRR 72
           I GIG   S +I +   + P +R   L E +V ++        R A+++   VE G L+ 
Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLTEDDVTRLYTALRTTVRDAVDRSSGVEAGKLKA 230

Query: 73  TVA 75
              
Sbjct: 231 EKK 233


>gi|168031593|ref|XP_001768305.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680483|gb|EDQ66919.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 268

 Score = 40.3 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69
           GIG     ++  +  I PE+ V+ L E +V +    IR+ +++   V+GD
Sbjct: 184 GIGNWVGDEVLFQAKIHPEQSVNSLTEEQVAKLHTAIREVLDKAVSVDGD 233


>gi|15669822|ref|NP_248636.1| hypothetical protein MJ_1625 [Methanocaldococcus jannaschii DSM
           2661]
 gi|42559938|sp|Q59020|Y1625_METJA RecName: Full=Uncharacterized protein MJ1625
 gi|1592339|gb|AAB99643.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 671

 Score = 40.3 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           + GIG   +++IC +  I  ++R   L E E+ ++
Sbjct: 197 VFGIGGLYAEEICERAEIDKKKR--DLSEEEIKKL 229


>gi|296169701|ref|ZP_06851319.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895698|gb|EFG75394.1| possible DNA-(apurinic or apyrimidinic site) lyase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 287

 Score = 40.3 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L + ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLTDEQLTTLHDAMVS--VLRDAVSRSVGQGAATL 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|223984404|ref|ZP_03634543.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM
           12042]
 gi|223963646|gb|EEF68019.1| hypothetical protein HOLDEFILI_01837 [Holdemania filiformis DSM
           12042]
          Length = 306

 Score = 40.3 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           GIG   + +IC  L I P +R  QL ++++  + +   Q
Sbjct: 167 GIGNIYANEICFALRIDPRKRCDQLTKAQITALPEITRQ 205


>gi|227890803|ref|ZP_04008608.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius ATCC
           11741]
 gi|227867212|gb|EEJ74633.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius ATCC
           11741]
          Length = 824

 Score = 40.3 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 12/73 (16%)

Query: 7   VNIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVI 54
           + +P  K  V A L      GIG K+++ I  KL I   +   +         L E +  
Sbjct: 90  IELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGIDAIDVLNNDMDKLEELGLSEKQKD 149

Query: 55  QIRQAIEQDYQVE 67
            I++ ++++Y ++
Sbjct: 150 SIKKVLKENYGID 162


>gi|297155165|gb|ADI04877.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis
           BCW-1]
          Length = 288

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 8/58 (13%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           RI GV   R + V      I GIG   S +I +   + P R    L E EV ++ +A+
Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLAGDLTEEEVARLYEAM 211


>gi|308803987|ref|XP_003079306.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus
           tauri]
 gi|116057761|emb|CAL53964.1| putative formamidopyrimidine-DNA glycosylase 1 (ISS) [Ostreococcus
           tauri]
          Length = 683

 Score = 39.9 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 19/32 (59%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            S +I  +  + PE R +++ +S++  IR+ I
Sbjct: 101 RSTEILYRARVHPETRANEMTDSQLEAIRERI 132


>gi|212703530|ref|ZP_03311658.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098]
 gi|212673030|gb|EEB33513.1| hypothetical protein DESPIG_01575 [Desulfovibrio piger ATCC 29098]
          Length = 286

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 5   AGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            G  +   + +  AL     + GIG   + +   +  I P R   +L E+E  ++R A++
Sbjct: 161 LGPRLHGRRAIKAALLDQTVLAGIGNIYADESLFRAGIDPRRPAGELSEAEAERLRIALQ 220

Query: 62  Q 62
           +
Sbjct: 221 E 221


>gi|71732765|gb|AAZ40008.1| fibronectin binding protein [Clostridium difficile]
 gi|71732771|gb|AAZ40011.1| fibronectin binding protein [Clostridium difficile]
 gi|71732793|gb|AAZ40022.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  I     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGINQNTIIKDISDEQFDSL 68


>gi|320101389|ref|YP_004176981.1| DNA topoisomerase VI subunit B [Desulfurococcus mucosus DSM 2162]
 gi|319753741|gb|ADV65499.1| DNA topoisomerase VI, B subunit [Desulfurococcus mucosus DSM 2162]
          Length = 529

 Score = 39.9 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 10/66 (15%)

Query: 6   GVNIPRAKRVVRALCY-------IHG---IGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           GV++   K+++ +  Y       I G   IG  +++ I  +  + P +    L E+E++ 
Sbjct: 236 GVDLELLKQIISSHNYSSVEELLIKGFQSIGEATARLILQQAGVDPAKPPVDLTENELLS 295

Query: 56  IRQAIE 61
           +   + 
Sbjct: 296 LVNTLR 301


>gi|160688761|gb|ABX45177.1| ribosomal protein S13 [Polysphondylium pallidum]
          Length = 144

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 1   MARIAG-VNIPRAKRVVRALCY-IHGIGFKSSQDICNKLAIPPERRVHQLVES---EVIQ 55
           M  I   + +   K++V  +   I G+ +  +  +C+   + P     +L  +   ++++
Sbjct: 1   MVIILDQIILNEKKKIVNEIKKEIPGLSYTLATKLCSLCGLLPSITGIKLSTNLNLKLMR 60

Query: 56  IRQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
           + Q  +  Y       + +  N++       YR LR+++G PV  QRT +NA+T  K
Sbjct: 61  LFQTYKGLYDFNFFNYKKMFNNMRNKDQ--AYRNLRYKKGYPVN-QRTRSNAKTAAK 114


>gi|295835423|ref|ZP_06822356.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74]
 gi|197696491|gb|EDY43424.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB74]
          Length = 287

 Score = 39.9 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   S +I +   + P +   +L E E  ++ +A          LR T+   + R   
Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETDRLYEA----------LRTTLTEAVTRSRG 223

Query: 84  LGCYR-GLRHRRGLPVRGQRT 103
           +   R     + GL V G RT
Sbjct: 224 IAAGRLKAEKKSGLRVHG-RT 243


>gi|255656572|ref|ZP_05401981.1| fibronectin-binding protein [Clostridium difficile QCD-23m63]
 gi|296449976|ref|ZP_06891740.1| fibronectin-binding protein [Clostridium difficile NAP08]
 gi|296878357|ref|ZP_06902365.1| fibronectin-binding protein [Clostridium difficile NAP07]
 gi|296261246|gb|EFH08077.1| fibronectin-binding protein [Clostridium difficile NAP08]
 gi|296430655|gb|EFH16494.1| fibronectin-binding protein [Clostridium difficile NAP07]
          Length = 591

 Score = 39.9 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21  YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            I+    GI    +++IC +  I     +  + + +   +
Sbjct: 197 SIYSKFLGISPIIAKEICYRAGINQNTIIKDISDEQFDSL 236


>gi|164687811|ref|ZP_02211839.1| hypothetical protein CLOBAR_01455 [Clostridium bartlettii DSM
           16795]
 gi|164603086|gb|EDQ96551.1| hypothetical protein CLOBAR_01455 [Clostridium bartlettii DSM
           16795]
          Length = 595

 Score = 39.5 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           GI    +++IC +  I    +   L   ++ Q+       Y+   D+   V  N
Sbjct: 209 GISPTVAKEICYRAEIDFNVKAEDLSRDDLSQL-------YRTFSDIFTKVKNN 255


>gi|237725655|ref|ZP_04556136.1| formamidopyrimidine-DNA glycosylase [Bacteroides sp. D4]
 gi|229435463|gb|EEO45540.1| formamidopyrimidine-DNA glycosylase [Bacteroides dorei 5_1_36/D4]
          Length = 276

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESE----VIQIRQAIEQDYQVE 67
             I GIG   S +I +   I P +    L + E    V++IR+ I    +  
Sbjct: 167 TVIAGIGNIYSDEILHAAGIYPGKYCSDLSDKEWNSLVVKIREIIRNSIETN 218


>gi|330719264|ref|ZP_08313864.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
           glycosylase [Leuconostoc fallax KCTC 3537]
          Length = 275

 Score = 39.5 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I GIG   + ++  +  I PE   ++L  S++  +R +I
Sbjct: 167 TKIAGIGNIYADEVLWQSKIHPETPANELDPSQLAILRDSI 207


>gi|31789466|gb|AAP58579.1| putative fapy-DNA glycosylase [uncultured Acidobacteria bacterium]
          Length = 299

 Score = 39.5 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               V RAL       GIG   S +I +   + P R+   L + E+ ++
Sbjct: 151 ENHTVKRALTDPHLFSGIGNAYSDEILHAAKMSPFRQTSSLTDEEIARL 199


>gi|284032237|ref|YP_003382168.1| hypothetical protein Kfla_4335 [Kribbella flavida DSM 17836]
 gi|283811530|gb|ADB33369.1| hypothetical protein Kfla_4335 [Kribbella flavida DSM 17836]
          Length = 104

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           RV   L  I G+G   +Q I  +  I   RRV  L  +++  + + 
Sbjct: 56  RVSALLQCIPGVGKVRAQQIMQRAGISETRRVRGLGSNQIAALMRE 101


>gi|71732785|gb|AAZ40018.1| fibronectin binding protein [Clostridium difficile]
 gi|71732787|gb|AAZ40019.1| fibronectin binding protein [Clostridium difficile]
 gi|71732795|gb|AAZ40023.1| fibronectin binding protein [Clostridium difficile]
 gi|71732797|gb|AAZ40024.1| fibronectin binding protein [Clostridium difficile]
 gi|71732799|gb|AAZ40025.1| fibronectin binding protein [Clostridium difficile]
 gi|71732801|gb|AAZ40026.1| fibronectin binding protein [Clostridium difficile]
 gi|71732803|gb|AAZ40027.1| fibronectin binding protein [Clostridium difficile]
 gi|71732805|gb|AAZ40028.1| fibronectin binding protein [Clostridium difficile]
 gi|71732815|gb|AAZ40033.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNTIIKDISDEQFDSL 68


>gi|326775044|ref|ZP_08234309.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326655377|gb|EGE40223.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 286

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           I GIG   S +I +   + P +R   L E +V ++  A+    Q
Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLDEDDVTRLYTALRSTLQ 214


>gi|182434517|ref|YP_001822236.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178463033|dbj|BAG17553.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 286

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           I GIG   S +I +   + P +R   L E +V ++  A+    Q
Sbjct: 171 IAGIGNAYSDEILHVAKMSPFKRTADLDEDDVTRLYTALRSTLQ 214


>gi|224062854|ref|XP_002300903.1| predicted protein [Populus trichocarpa]
 gi|222842629|gb|EEE80176.1| predicted protein [Populus trichocarpa]
          Length = 85

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)

Query: 87  YRGLRHRRGLPVRGQRTHTNARTRKKFGKGGVARKR 122
           +RGLRH  GL VRGQ T    R  K     GV++KR
Sbjct: 54  HRGLRHYWGLIVRGQHTDYWPR-GKTV---GVSKKR 85


>gi|229495049|ref|ZP_04388795.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis
           SK121]
 gi|229317980|gb|EEN83855.1| DNA-formamidopyrimidine glycosylase [Rhodococcus erythropolis
           SK121]
          Length = 288

 Score = 39.5 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI      +   V ++L  I GIG   S +I +   + P     +L   ++  +   + 
Sbjct: 161 ARI------KNSIVDQSL--IAGIGNAYSDEILHTAKLSPFATSSRLTPDQISTLYAVMR 212

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
               +   + R+   +  RL       G+R H R GLP 
Sbjct: 213 S--TLADAIERSEGQDAARLKGEKR-SGMRVHARTGLPC 248


>gi|303246702|ref|ZP_07332980.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
           JJ]
 gi|302492042|gb|EFL51920.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio fructosovorans
           JJ]
          Length = 281

 Score = 39.1 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
             I GIG   + +  +   I PE R   +  S   ++  AI+
Sbjct: 174 TVIAGIGNIYADESLHAAGIHPETRAGDISPSRAEKLLAAIQ 215


>gi|312136934|ref|YP_004004271.1| fibronectin-binding a domain protein [Methanothermus fervidus DSM
           2088]
 gi|311224653|gb|ADP77509.1| Fibronectin-binding A domain protein [Methanothermus fervidus DSM
           2088]
          Length = 645

 Score = 39.1 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 9   IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
           +   K VVR L  ++G G   +++I  +  I        L ++E+ +I  +IE+ Y
Sbjct: 172 LNSDKDVVRTL-ALNGFGGTYAEEIVYRSGIDKNTPSKSLSDNEINKIYDSIEEIY 226


>gi|108805342|ref|YP_645279.1| DNA-(apurinic or apyrimidinic site) lyase/formamidopyrimidine-DNA
           glycosylase [Rubrobacter xylanophilus DSM 9941]
 gi|108766585|gb|ABG05467.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
           glycosylase [Rubrobacter xylanophilus DSM 9941]
          Length = 286

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG   + +I     + P RR   L E E  ++  AI  +     + R
Sbjct: 167 ISGIGNIYADEILYDARLSPRRRASSLSEEEWERLYAAIRSNLAAGIEHR 216


>gi|118619547|ref|YP_907879.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99]
 gi|118571657|gb|ABL06408.1| formamidopyrimidine-DNA glycosylase [Mycobacterium ulcerans Agy99]
          Length = 287

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L E ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAAKLSEEQLAALHDAVVS--VLTDAVSRSVGQGAATL 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|25026760|ref|NP_736814.1| putative transport protein [Corynebacterium efficiens YS-314]
 gi|259508103|ref|ZP_05751003.1| transport protein [Corynebacterium efficiens YS-314]
 gi|23492039|dbj|BAC17014.1| putative transport protein [Corynebacterium efficiens YS-314]
 gi|259164326|gb|EEW48880.1| transport protein [Corynebacterium efficiens YS-314]
          Length = 445

 Score = 39.1 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLM-DLGCY 87
           SS  +   L   P+ R   + E EV++I  + E   Q E ++   V     RL+ ++   
Sbjct: 159 SSNLLLRLLGFDPDARTEDMTEEEVVEIVTSFEGFEQGEREIVADVFEANDRLVTEI--- 215

Query: 88  RGLRHR 93
             +RHR
Sbjct: 216 --MRHR 219


>gi|71732763|gb|AAZ40007.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 39.1 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68


>gi|71732759|gb|AAZ40005.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68


>gi|284042578|ref|YP_003392918.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684]
 gi|283946799|gb|ADB49543.1| DNA-formamidopyrimidine glycosylase [Conexibacter woesei DSM 14684]
          Length = 281

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           I GIG     +I  +  + P +R   L E E  ++R A
Sbjct: 166 IAGIGRSWVDEILWEARLSPFKRGRDLSEEEAERLRAA 203


>gi|262201295|ref|YP_003272503.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM
           43247]
 gi|262084642|gb|ACY20610.1| DNA-formamidopyrimidine glycosylase [Gordonia bronchialis DSM
           43247]
          Length = 295

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY-QVEGDLRRTVAMNIKRLM 82
           GIG   S +I +   + P      L E +V  +  A+        G L       +K   
Sbjct: 182 GIGNAYSDEILHTARLSPFATAKSLTEEQVSTLYDAMRSVLADATGRLEGQTVARLKSEK 241

Query: 83  DLGCYRGLR-HRR-GLPV 98
                 GLR H R GLP 
Sbjct: 242 RT----GLRVHARTGLPC 255


>gi|71732773|gb|AAZ40012.1| fibronectin binding protein [Clostridium difficile]
 gi|71732779|gb|AAZ40015.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 39.1 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68


>gi|297625311|ref|YP_003687074.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
           (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP
           lyase mutM) [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921076|emb|CBL55617.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
           (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP
           lyase mutM) [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 287

 Score = 38.7 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I GIG   S +I +   + P +    L + EV ++  AI  
Sbjct: 172 IAGIGNAYSDEILHDAKLSPFKPAANLTDDEVERLYAAIRD 212


>gi|301300083|ref|ZP_07206301.1| helicase, RecD/TraA family [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852315|gb|EFK79981.1| helicase, RecD/TraA family [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 824

 Score = 38.7 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 8   NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVIQ 55
            +P  K  V A L      GIG K+++ I  KL +   +   +         L E +   
Sbjct: 91  ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVDAIDVLNNDMDKLEELGLSEKQKDS 150

Query: 56  IRQAIEQDYQVE 67
           I++ ++++Y ++
Sbjct: 151 IKKVLKENYGID 162


>gi|71732769|gb|AAZ40010.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 38.7 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 68


>gi|183984529|ref|YP_001852820.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M]
 gi|183177855|gb|ACC42965.1| formamidopyrimidine-DNA glycosylase [Mycobacterium marinum M]
          Length = 287

 Score = 38.7 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L E ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAAKLSEEQLAALHDAVVS--VLTDAVSRSVGQGAATL 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|71732761|gb|AAZ40006.1| fibronectin binding protein [Clostridium difficile]
 gi|71732767|gb|AAZ40009.1| fibronectin binding protein [Clostridium difficile]
 gi|71732791|gb|AAZ40021.1| fibronectin binding protein [Clostridium difficile]
 gi|71732811|gb|AAZ40031.1| fibronectin binding protein [Clostridium difficile]
 gi|71732813|gb|AAZ40032.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 38.7 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 68


>gi|90961705|ref|YP_535621.1| exodeoxyribonuclease V alpha chain [Lactobacillus salivarius
           UCC118]
 gi|90820899|gb|ABD99538.1| Exodeoxyribonuclease V alpha chain [Lactobacillus salivarius
           UCC118]
          Length = 824

 Score = 38.7 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 8   NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIP-PERRVHQ--------LVESEVIQ 55
            +P  K  V A L      GIG K+++ I  KL +   +   +         L E +   
Sbjct: 91  ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVDAIDVLNNDMDKLEELGLSEKQKDS 150

Query: 56  IRQAIEQDYQVE 67
           I++ ++++Y ++
Sbjct: 151 IKKVLKENYGID 162


>gi|182439847|ref|YP_001827566.1| putative integration host factor [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|239939920|ref|ZP_04691857.1| putative integration host factor [Streptomyces roseosporus NRRL
           15998]
 gi|239978395|ref|ZP_04700919.1| putative integration host factor [Streptomyces albus J1074]
 gi|239986405|ref|ZP_04707069.1| putative integration host factor [Streptomyces roseosporus NRRL
           11379]
 gi|326780511|ref|ZP_08239776.1| putative integration host factor [Streptomyces cf. griseus
           XylebKG-1]
 gi|178468363|dbj|BAG22883.1| putative integration host factor [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660844|gb|EGE45690.1| putative integration host factor [Streptomyces cf. griseus
           XylebKG-1]
          Length = 107

 Score = 38.7 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|126700212|ref|YP_001089109.1| fibronectin-binding protein [Clostridium difficile 630]
 gi|115251649|emb|CAJ69482.1| Fibronectin-binding protein A [Clostridium difficile]
          Length = 591

 Score = 38.7 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21  YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            I+    GI    +++IC +  +     +  + + +   +
Sbjct: 197 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDAL 236


>gi|71732775|gb|AAZ40013.1| fibronectin binding protein [Clostridium difficile]
 gi|71732777|gb|AAZ40014.1| fibronectin binding protein [Clostridium difficile]
 gi|71732783|gb|AAZ40017.1| fibronectin binding protein [Clostridium difficile]
 gi|71732789|gb|AAZ40020.1| fibronectin binding protein [Clostridium difficile]
 gi|71732809|gb|AAZ40030.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 38.7 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 68


>gi|291443351|ref|ZP_06582741.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291346298|gb|EFE73202.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 135

 Score = 38.7 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 89  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 129


>gi|21666416|gb|AAM73699.1|AF394222_1 fibronectin-binding protein [Clostridium difficile]
          Length = 591

 Score = 38.7 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21  YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            I+    GI    +++IC +  +     +  + + +   +
Sbjct: 197 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236


>gi|254976184|ref|ZP_05272656.1| fibronectin-binding protein [Clostridium difficile QCD-66c26]
 gi|255093573|ref|ZP_05323051.1| fibronectin-binding protein [Clostridium difficile CIP 107932]
 gi|255315318|ref|ZP_05356901.1| fibronectin-binding protein [Clostridium difficile QCD-76w55]
 gi|255517985|ref|ZP_05385661.1| fibronectin-binding protein [Clostridium difficile QCD-97b34]
 gi|255651101|ref|ZP_05398003.1| fibronectin-binding protein [Clostridium difficile QCD-37x79]
 gi|260684166|ref|YP_003215451.1| fibronectin-binding protein [Clostridium difficile CD196]
 gi|260687825|ref|YP_003218959.1| fibronectin-binding protein [Clostridium difficile R20291]
 gi|306520952|ref|ZP_07407299.1| fibronectin-binding protein [Clostridium difficile QCD-32g58]
 gi|260210329|emb|CBA64662.1| fibronectin-binding protein [Clostridium difficile CD196]
 gi|260213842|emb|CBE05835.1| fibronectin-binding protein [Clostridium difficile R20291]
          Length = 591

 Score = 38.7 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21  YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            I+    GI    +++IC +  +     +  + + +   +
Sbjct: 197 SIYSKFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236


>gi|320011931|gb|ADW06781.1| putative integration host factor [Streptomyces flavogriseus ATCC
           33331]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|254391349|ref|ZP_05006553.1| guanylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294811543|ref|ZP_06770186.1| putative integration host factor [Streptomyces clavuligerus ATCC
           27064]
 gi|326440071|ref|ZP_08214805.1| putative integration host factor [Streptomyces clavuligerus ATCC
           27064]
 gi|197705040|gb|EDY50852.1| guanylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294324142|gb|EFG05785.1| putative integration host factor [Streptomyces clavuligerus ATCC
           27064]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|254383571|ref|ZP_04998921.1| guanylate kinase [Streptomyces sp. Mg1]
 gi|194342466|gb|EDX23432.1| guanylate kinase [Streptomyces sp. Mg1]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|255101757|ref|ZP_05330734.1| fibronectin-binding protein [Clostridium difficile QCD-63q42]
 gi|255307625|ref|ZP_05351796.1| fibronectin-binding protein [Clostridium difficile ATCC 43255]
          Length = 591

 Score = 38.3 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21  YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            I+    GI    +++IC +  +     +  + + +   +
Sbjct: 197 SIYSRFLGISPIIAKEICYRAGVNQNAIIKDISDEQFDSL 236


>gi|170291064|ref|YP_001737880.1| DNA topoisomerase VI subunit B [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170175144|gb|ACB08197.1| DNA topoisomerase VI, B subunit [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 512

 Score = 38.3 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 22/37 (59%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           +G K++ ++     +PP++R   L + ++ ++ +A+ 
Sbjct: 266 VGKKTASEVLKIAGLPPDKRPSDLKDEDIRRLYEALR 302


>gi|262091720|gb|ACY25310.1| ribosomal protein S13/S18 [uncultured actinobacterium]
          Length = 96

 Score = 38.3 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 22 IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
          I G+G   ++ I ++L I     V  L   +   I + + Q
Sbjct: 55 IPGVGKVKARRILSELDISERCHVGDLTSEQRSIIVERVAQ 95


>gi|328881128|emb|CCA54367.1| integration host factor [Streptomyces venezuelae ATCC 10712]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|296111203|ref|YP_003621584.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
           11154]
 gi|295832734|gb|ADG40615.1| formamidopyrimidine-DNA glycosylase [Leuconostoc kimchii IMSNU
           11154]
          Length = 287

 Score = 38.3 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
            I GIG   + ++  +  I PE   ++L E E+  +RQ I  + +
Sbjct: 168 KIAGIGNIYADEVLWQSKIHPETPANELSEIELATLRQNIISEMK 212


>gi|21219981|ref|NP_625760.1| hypothetical protein SCO1480 [Streptomyces coelicolor A3(2)]
 gi|239932435|ref|ZP_04689388.1| hypothetical protein SghaA1_29700 [Streptomyces ghanaensis ATCC
           14672]
 gi|256788920|ref|ZP_05527351.1| hypothetical protein SlivT_30913 [Streptomyces lividans TK24]
 gi|289772807|ref|ZP_06532185.1| guanylate kinase [Streptomyces lividans TK24]
 gi|290961858|ref|YP_003493040.1| hypothetical protein SCAB_75261 [Streptomyces scabiei 87.22]
 gi|297198318|ref|ZP_06915715.1| guanylate kinase [Streptomyces sviceus ATCC 29083]
 gi|302550121|ref|ZP_07302463.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736]
 gi|8249939|emb|CAB93360.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|197714369|gb|EDY58403.1| guanylate kinase [Streptomyces sviceus ATCC 29083]
 gi|260651384|emb|CBG74506.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
 gi|289703006|gb|EFD70435.1| guanylate kinase [Streptomyces lividans TK24]
 gi|302467739|gb|EFL30832.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|282866202|ref|ZP_06275249.1| hypothetical protein SACTEDRAFT_5794 [Streptomyces sp. ACTE]
 gi|282558986|gb|EFB64541.1| hypothetical protein SACTEDRAFT_5794 [Streptomyces sp. ACTE]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|29833412|ref|NP_828046.1| hypothetical protein SAV_6870 [Streptomyces avermitilis MA-4680]
 gi|29610535|dbj|BAC74581.1| putative integration host factor [Streptomyces avermitilis MA-4680]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|25005455|dbj|BAC23143.1| probable mIHF protein [Streptomyces kasugaensis]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|323359990|ref|YP_004226386.1| guanylate kinase [Microbacterium testaceum StLB037]
 gi|323276361|dbj|BAJ76506.1| guanylate kinase [Microbacterium testaceum StLB037]
          Length = 307

 Score = 38.3 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           L  I  IG      I + L I P +R+  L   +   +R  ++
Sbjct: 64  LTAIPAIGESKRDRILDALGISPVKRLGGLGSRQRDALRDYLD 106


>gi|302541085|ref|ZP_07293427.1| mIHF [Streptomyces hygroscopicus ATCC 53653]
 gi|307326802|ref|ZP_07605994.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
 gi|297155766|gb|ADI05478.1| hypothetical protein SBI_02357 [Streptomyces bingchenggensis BCW-1]
 gi|302458703|gb|EFL21796.1| mIHF [Streptomyces himastatinicus ATCC 53653]
 gi|306887565|gb|EFN18559.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|297195538|ref|ZP_06912936.1| guanylate kinase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721360|gb|EDY65268.1| guanylate kinase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 107

 Score = 38.3 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 101


>gi|300857582|ref|YP_003782565.1| phosphomannomutase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685036|gb|ADK27958.1| Phosphomannomutase [Corynebacterium pseudotuberculosis FRC41]
 gi|302329873|gb|ADL20067.1| Phosphomannomutase [Corynebacterium pseudotuberculosis 1002]
          Length = 554

 Score = 38.3 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 4   IAGVNIPRAKR--VVRALCYIHGIGFKSSQDICNKLAI 39
           +AG  I    R  V  AL  +HG+G    ++I  K   
Sbjct: 220 LAGAEISAETRGNVRIALTAMHGVGAALGKEILEKAGF 257


>gi|156937878|ref|YP_001435674.1| DNA topoisomerase VI subunit B [Ignicoccus hospitalis KIN4/I]
 gi|156566862|gb|ABU82267.1| DNA topoisomerase VI, B subunit [Ignicoccus hospitalis KIN4/I]
          Length = 553

 Score = 38.3 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 1   MARIAGVNIPRAKRVVRALC-YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           M RIA   +  AK +++ L      +G K+++ I +   + P+    +L E ++  +  A
Sbjct: 265 MKRIAQ--LTTAKTLLQMLTTEFQAVGAKTAKAILSMAGLEPDLEPKKLTEEQIKALVNA 322

Query: 60  IEQ 62
           +++
Sbjct: 323 MKE 325


>gi|329766435|ref|ZP_08257979.1| DNA topoisomerase VI, B subunit [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137034|gb|EGG41326.1| DNA topoisomerase VI, B subunit [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 613

 Score = 38.3 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 19/38 (50%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++          PE+R+  +   E++++  ++++
Sbjct: 371 IGPSTAVKFAEFAGFKPEKRMGSMTNEELVKLSDSLQK 408


>gi|302205319|gb|ADL09661.1| Putative phosphoglucomutase [Corynebacterium pseudotuberculosis
           C231]
 gi|308275559|gb|ADO25458.1| Phosphomannomutase [Corynebacterium pseudotuberculosis I19]
          Length = 554

 Score = 38.3 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 4   IAGVNIPRAKR--VVRALCYIHGIGFKSSQDICNKLAI 39
           +AG  I    R  V  AL  +HG+G    ++I  K   
Sbjct: 220 LAGAEISAETRGNVRIALTAMHGVGAALGKEILEKAGF 257


>gi|182414188|ref|YP_001819254.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
 gi|177841402|gb|ACB75654.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
          Length = 287

 Score = 38.3 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   + +I  +  I P      L E++   +
Sbjct: 170 GIGNWMADEILWRAGIHPRTAAGSLTEAQSKTL 202


>gi|326693336|ref|ZP_08230341.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
           glycosylase [Leuconostoc argentinum KCTC 3773]
          Length = 280

 Score = 38.3 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I GIG   + ++  +  I PE   + L E ++  +RQ I
Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPETPANLLSEMQLATLRQNI 207


>gi|302533364|ref|ZP_07285706.1| guanylate kinase [Streptomyces sp. C]
 gi|302442259|gb|EFL14075.1| guanylate kinase [Streptomyces sp. C]
          Length = 128

 Score = 38.3 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 82  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122


>gi|260663491|ref|ZP_05864381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
           28-3-CHN]
 gi|260552032|gb|EEX25085.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum
           28-3-CHN]
          Length = 279

 Score = 37.9 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 21/37 (56%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           G+G   + ++  +  I PE+  + L + ++ ++R+ I
Sbjct: 170 GLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENI 206


>gi|11499620|ref|NP_070862.1| hypothetical protein AF2038 [Archaeoglobus fulgidus DSM 4304]
 gi|2648497|gb|AAB89216.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 627

 Score = 37.9 bits (88), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 10  PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
              + VVR L  + G+G   ++++C +  I  +++  +L E E  +I + IE
Sbjct: 152 DEDREVVRVL-AMSGLGGLYAEEVCLRAGIDKKKKYAELSEDERKKIDEEIE 202


>gi|327541806|gb|EGF28318.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica WH47]
          Length = 300

 Score = 37.9 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 8   NIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           N+  +KR +  AL     + GIG   + +I     + P  R  +L + +  +I
Sbjct: 160 NLAASKRPIKVALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQWERI 212


>gi|32474898|ref|NP_867892.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1]
 gi|32445438|emb|CAD75439.1| formamidopyrimidine-DNA glycosylase [Rhodopirellula baltica SH 1]
          Length = 300

 Score = 37.9 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 8   NIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           N+  +KR +  AL     + GIG   + +I     + P  R  +L + +  +I
Sbjct: 160 NLAASKRPIKVALLDQSAVAGIGNLYAAEILFLAGVDPRTRCDRLTKPQWERI 212


>gi|184155792|ref|YP_001844132.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
           3956]
 gi|227515614|ref|ZP_03945663.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
           ATCC 14931]
 gi|183227136|dbj|BAG27652.1| formamidopyrimidine-DNA glycosylase [Lactobacillus fermentum IFO
           3956]
 gi|227086044|gb|EEI21356.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus fermentum
           ATCC 14931]
 gi|299783432|gb|ADJ41430.1| DNA glycosylase [Lactobacillus fermentum CECT 5716]
          Length = 279

 Score = 37.9 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 21/37 (56%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           G+G   + ++  +  I PE+  + L + ++ ++R+ I
Sbjct: 170 GLGNIYADEVLWQTQINPEQPANSLTDDQIKRLRENI 206


>gi|83945191|ref|ZP_00957540.1| hypothetical protein OA2633_00450 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851361|gb|EAP89217.1| hypothetical protein OA2633_00450 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 191

 Score = 37.9 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
           L  I G+G K++     +L +    ++    + +V ++  AI    ++E D
Sbjct: 131 LTKIKGLGPKAAAS-LAELGVTSLAQIANWSDEDVARMDAAINGRGRIERD 180


>gi|226307944|ref|YP_002767904.1| DNA glycosylase [Rhodococcus erythropolis PR4]
 gi|226187061|dbj|BAH35165.1| putative DNA glycosylase [Rhodococcus erythropolis PR4]
          Length = 288

 Score = 37.9 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI      +   V ++L  I GIG   S +I +   + P     +L   ++  +   + 
Sbjct: 161 ARI------KNSIVDQSL--IAGIGNAYSDEILHTARLSPFATSSRLTPEQISTLYAVMR 212

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
               +   + R+   +  RL       G+R H R GLP 
Sbjct: 213 S--TLADAIERSEGQDAARLKGEKR-SGMRVHARTGLPC 248


>gi|300781712|ref|ZP_07091566.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030]
 gi|300533419|gb|EFK54480.1| endonuclease VIII [Corynebacterium genitalium ATCC 33030]
          Length = 282

 Score = 37.9 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
           GIG +   +IC    + P R V +L E    ++R  I+    +   L  T    +KR
Sbjct: 168 GIGNEYRAEICFLAGVHPARTVGELGEE---KVRSIID----ISRRLMWTNKEEVKR 217


>gi|225571055|ref|ZP_03780072.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM
           15053]
 gi|225160136|gb|EEG72755.1| hypothetical protein CLOHYLEM_07154 [Clostridium hylemonae DSM
           15053]
          Length = 275

 Score = 37.9 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
             I G+G    QDI  +  I P+++V +L   E  ++
Sbjct: 169 QRIPGLGNGVLQDILFRAGIHPKKKVGKLTAEETERL 205


>gi|294628327|ref|ZP_06706887.1| mIHF [Streptomyces sp. e14]
 gi|292831660|gb|EFF90009.1| mIHF [Streptomyces sp. e14]
          Length = 128

 Score = 37.9 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 82  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122


>gi|114609688|ref|XP_001159930.1| PREDICTED: similar to ribosomal protein [Pan troglodytes]
          Length = 70

 Score = 37.9 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 33 ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
          +  K  I   +R  +L E EV  +   I+  +Q
Sbjct: 2  VLRKADIDITKRAGELTEDEVEPVITIIQNLHQ 34


>gi|256789490|ref|ZP_05527921.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24]
 gi|289773384|ref|ZP_06532762.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24]
 gi|289703583|gb|EFD71012.1| formamidopyrimidine-DNA glycosylase [Streptomyces lividans TK24]
          Length = 287

 Score = 37.9 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 12/83 (14%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G   S +I +   + P +    L + E  ++  A          LR T+   ++R 
Sbjct: 172 IAGVGNAYSDEILHAAKMSPFKLAASLTDDETARLYAA----------LRDTLTEAVERS 221

Query: 82  MDLGCYR-GLRHRRGLPVRGQRT 103
             +   R     + GL V G RT
Sbjct: 222 RGIAAGRLKAEKKSGLRVHG-RT 243


>gi|118468423|ref|YP_889782.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169710|gb|ABK70606.1| formamidopyrimidine-DNA glycosylase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 288

 Score = 37.9 bits (88), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           GIG   S +I +   + P     +L ++++  +  A+     +   + R+V      L  
Sbjct: 175 GIGNAYSDEILHVAKLSPFTTAGKLTDAQLGALHDAMIT--VLTDAVSRSVGQQAATLKG 232

Query: 84  LGCYRGLR-HRR-GLPV 98
                GLR H R GLP 
Sbjct: 233 EKR-SGLRVHARTGLPC 248


>gi|291440801|ref|ZP_06580191.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343696|gb|EFE70652.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 128

 Score = 37.9 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 82  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 122


>gi|318060353|ref|ZP_07979076.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actG]
          Length = 287

 Score = 37.9 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   S +I +   + P +   +L E E  ++ +A          LR T+   + R   
Sbjct: 174 GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 223

Query: 84  L--GCYRGLRHRRGLPVRGQRT 103
           +  G  +  + + GL V G RT
Sbjct: 224 IAAGSLKAEK-KSGLRVHG-RT 243


>gi|300087641|ref|YP_003758163.1| adenylosuccinate synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527374|gb|ADJ25842.1| adenylosuccinate synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 427

 Score = 37.9 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 9/78 (11%)

Query: 14  RVVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR--QAIEQDYQVEGDL 70
           R  ++L   + GIG   +  +  ++ I    R   L++ EV++IR    +E   ++   L
Sbjct: 120 RGKKSLGTTLRGIGPAFADKV-ARMGI----RAGDLLDPEVLRIRLEYVLEYKNKILTKL 174

Query: 71  RRTVAMNIKRLMDL-GCY 87
                ++I+ L +L   Y
Sbjct: 175 YGEPPVDIEELYNLCRSY 192


>gi|296109018|ref|YP_003615967.1| Fibronectin-binding A domain protein [Methanocaldococcus infernus
           ME]
 gi|295433832|gb|ADG13003.1| Fibronectin-binding A domain protein [Methanocaldococcus infernus
           ME]
          Length = 666

 Score = 37.9 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   +++IC +  I   ++   L E E+ ++
Sbjct: 195 ILGIGGLYAEEICERANID--KKKKNLSEEEIKKL 227


>gi|254819353|ref|ZP_05224354.1| hypothetical protein MintA_05478 [Mycobacterium intracellulare ATCC
           13950]
          Length = 287

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L E ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSEKQLAALHDAMIT--VLTDAVSRSVGQGAATL 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|108801300|ref|YP_641497.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS]
 gi|119870451|ref|YP_940403.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS]
 gi|126437281|ref|YP_001072972.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS]
 gi|108771719|gb|ABG10441.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. MCS]
 gi|119696540|gb|ABL93613.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. KMS]
 gi|126237081|gb|ABO00482.1| DNA-formamidopyrimidine glycosylase [Mycobacterium sp. JLS]
          Length = 287

 Score = 37.6 bits (87), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           GIG   S +I +   + P    ++L   +V  +  A+     +   + R+V      L  
Sbjct: 174 GIGNAYSDEILHVAQLSPFATANKLTPEQVATLHDAMLS--VLTDAVSRSVGQQAATLKG 231

Query: 84  LGCYRGLR-HRR-GLPV 98
                GLR H R GLP 
Sbjct: 232 EKR-SGLRVHARTGLPC 247


>gi|256393641|ref|YP_003115205.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila
           DSM 44928]
 gi|256359867|gb|ACU73364.1| DNA-(apurinic or apyrimidinic site) lyase [Catenulispora acidiphila
           DSM 44928]
          Length = 288

 Score = 37.6 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 10/80 (12%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           GIG   S +I +   + P +   +L   EV  + Q I     +              + D
Sbjct: 175 GIGNAYSDEILHAARMSPYKLAAKLTPDEVADLYQVI-----IGTLTDAVERSRGLPMKD 229

Query: 84  LGCYRGLRHRRGLPVRGQRT 103
           L   +    + GL V G RT
Sbjct: 230 LKSEK----KSGLRVHG-RT 244


>gi|255531639|ref|YP_003092011.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366]
 gi|255344623|gb|ACU03949.1| DNA-formamidopyrimidine glycosylase [Pedobacter heparinus DSM 2366]
          Length = 258

 Score = 37.6 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 11/71 (15%)

Query: 22  IHGIGFKSSQDICNKLAIP--------PERRVHQLVESEVIQIRQAIEQDYQVEGDLRRT 73
           I GIG   + +I  +  I         P+ +V +L +     +R+ I+   Q+   L   
Sbjct: 158 IRGIGNTYADEILWEAGISPFSVSKAIPKAKVRELHQVIGKLLRKEIQ---QISKMLPDE 214

Query: 74  VAMNIKRLMDL 84
           +   IK  + +
Sbjct: 215 LGGEIKDFLKI 225


>gi|302523189|ref|ZP_07275531.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
 gi|302432084|gb|EFL03900.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. SPB78]
          Length = 278

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   S +I +   + P +   +L E E  ++ +A          LR T+   + R   
Sbjct: 165 GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 214

Query: 84  L--GCYRGLRHRRGLPVRGQRT 103
           +  G  +  + + GL V G RT
Sbjct: 215 IAAGSLKAEK-KSGLRVHG-RT 234


>gi|291008458|ref|ZP_06566431.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 284

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           R +R+   L     I GIG   S +I +   + P     +L    V ++   + +   + 
Sbjct: 155 RTERIKTVLTDQSMIAGIGNAYSDEILHAAKLSPYATAGRLDADAVERLHATMRE--ILT 212

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLR-H-RRGLPV 98
             + R++  +  RL       G+R H R GLP 
Sbjct: 213 DAVERSLKQDAARLKAEKR-SGMRVHGRTGLPC 244


>gi|229821354|ref|YP_002882880.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM
           12333]
 gi|229567267|gb|ACQ81118.1| DNA-formamidopyrimidine glycosylase [Beutenbergia cavernae DSM
           12333]
          Length = 302

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 11  RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R +++  AL     + GIG   S +I +   + P      L + +V ++  A  Q
Sbjct: 173 RNQQLKGALRDQTLVAGIGNAYSDEILHAARMSPFTLTKSLTDDDVARLTDATRQ 227


>gi|326201884|ref|ZP_08191754.1| Fibronectin-binding A domain protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987679|gb|EGD48505.1| Fibronectin-binding A domain protein [Clostridium papyrosolvens DSM
           2782]
          Length = 592

 Score = 37.6 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 8   NIPRAKRVV-RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           N+  AK      L  + G    + +DIC+   +P +  +++L ES+  +I+ A+  
Sbjct: 185 NVEGAKHAEGIILNTVKGFSPYTCRDICSAAGVPSKTPLNELNESDKEKIKTALSN 240


>gi|56551194|ref|YP_162033.1| hypothetical protein ZMO0298 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|9931343|gb|AAG02153.1|AF212041_9 NADH dehydogenase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542768|gb|AAV88922.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 232

 Score = 37.6 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           L  I G+G K +  I   L I    ++    ++++ +I
Sbjct: 156 LTQIKGLGPK-ANKILAALGITRFSQIAAWTDADIAEI 192


>gi|118464184|ref|YP_880320.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
 gi|254773947|ref|ZP_05215463.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118165471|gb|ABK66368.1| formamidopyrimidine-DNA glycosylase [Mycobacterium avium 104]
          Length = 287

 Score = 37.6 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L + ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSDKQLATLHDAMVT--VLTDAVSRSVGQGAAML 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|268323401|emb|CBH36989.1| conserved hypothetical protein containing fibronectin-binding
           protein A N-terminal domain, DUF814 family [uncultured
           archaeon]
 gi|268324037|emb|CBH37625.1| conserved hypothetical protein containing fibronectin-binding
           protein A N-terminal (FbpA) domain and DUF814 domain
           [uncultured archaeon]
          Length = 631

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 16/32 (50%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            ++++C K  I    R  +L  +E+  I + I
Sbjct: 190 YAEEVCAKAGIDKRMRADELTATEINAIHETI 221


>gi|227542448|ref|ZP_03972497.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181646|gb|EEI62618.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 286

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           R K +  AL    G G   ++ I     I P +R  +L   E ++I + 
Sbjct: 236 RRKTLRAALGSFFG-GADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283


>gi|227487807|ref|ZP_03918123.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092309|gb|EEI27621.1| dimethyladenosine transferase [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 286

 Score = 37.6 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           R K +  AL    G G   ++ I     I P +R  +L   E ++I + 
Sbjct: 236 RRKTLRAALGSFFG-GADRAEAILTAAGIDPRQRGEKLGVDEFVRIAKE 283


>gi|111019239|ref|YP_702211.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1]
 gi|110818769|gb|ABG94053.1| DNA-formamidopyrimidine glycosylase [Rhodococcus jostii RHA1]
          Length = 288

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI      +   V ++L    G+G   S +I +   I P      L E +V  +  A+ 
Sbjct: 161 ARI------KNALVDQSLLA--GVGNAYSDEILHTAKISPFATSRTLPEDQVHVLYDAMR 212

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
               +   ++R++  +  RL       G+R H R GLP 
Sbjct: 213 S--VLSDAVQRSLGQDAARLKGEKR-SGMRVHARTGLPC 248


>gi|41406987|ref|NP_959823.1| hypothetical protein MAP0889 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395338|gb|AAS03206.1| hypothetical protein MAP_0889 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 287

 Score = 37.6 bits (87), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L + ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSDKQLATLHDAMVT--VLTDAVSRSVGQGAAML 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|300214317|gb|ADJ78733.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase)
           (DNA-(apurinic or apyrimidinic site) lyase mutM) (AP
           lyase mutM) [Lactobacillus salivarius CECT 5713]
          Length = 207

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 11  RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
           R K +  AL     + G+G   + ++     I PE   ++L E EV  +R  I ++ 
Sbjct: 85  RKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKEL 141


>gi|298524435|ref|ZP_07011844.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|298494229|gb|EFI29523.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis 94_M4241A]
          Length = 166

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +AI     +   +RR+V      L
Sbjct: 51  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAIAS--VLSDAVRRSVGQGAAML 108

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 109 KGEKR-SGLRVHARTGLPC 126


>gi|255283975|ref|ZP_05348530.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM
           14469]
 gi|255265428|gb|EET58633.1| DNA-formamidopyrimidine glycosylase [Bryantella formatexigens DSM
           14469]
          Length = 300

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 20/46 (43%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
            Y+ GIG   S +I     I P R    L E E  ++ + I +  Q
Sbjct: 193 QYVAGIGNIYSDEILFAAGIYPGRGACSLTEKEWERLAEEIPRTMQ 238


>gi|119716662|ref|YP_923627.1| hypothetical protein Noca_2435 [Nocardioides sp. JS614]
 gi|119537323|gb|ABL81940.1| conserved hypothetical protein [Nocardioides sp. JS614]
          Length = 108

 Score = 37.6 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           RVV  L  + G+G   ++ +  +L I   RRV  L   +V  + + 
Sbjct: 58  RVVDLLQSMPGLGKVRARQVMERLGIAESRRVRGLGAKQVAALEKE 103


>gi|301300324|ref|ZP_07206529.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius
          ACS-116-V-Col5a]
 gi|300852060|gb|EFK79739.1| DNA-formamidopyrimidine glycosylase [Lactobacillus salivarius
          ACS-116-V-Col5a]
          Length = 133

 Score = 37.2 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 4  IAGVNIPRAKR-VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
          I   N+ R K+ +  AL     + G+G   + ++     I PE   ++L E EV  +R  
Sbjct: 3  IFSKNLKRRKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDN 62

Query: 60 IEQDY 64
          I ++ 
Sbjct: 63 IIKEL 67


>gi|295839952|ref|ZP_06826885.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|302517953|ref|ZP_07270295.1| guanylate kinase [Streptomyces sp. SPB78]
 gi|318057063|ref|ZP_07975786.1| hypothetical protein SSA3_03921 [Streptomyces sp. SA3_actG]
 gi|318080116|ref|ZP_07987448.1| hypothetical protein SSA3_26360 [Streptomyces sp. SA3_actF]
 gi|197696787|gb|EDY43720.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|302426848|gb|EFK98663.1| guanylate kinase [Streptomyces sp. SPB78]
          Length = 107

 Score = 37.2 bits (86), Expect = 0.69,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +  I  +L I   RRV  L  +++  + + 
Sbjct: 61  LESLPGVGKVRANQIMERLGISKSRRVRGLGSNQIASLERE 101


>gi|318078894|ref|ZP_07986226.1| DNA-formamidopyrimidine glycosylase [Streptomyces sp. SA3_actF]
          Length = 210

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   S +I +   + P +   +L E E  ++ +A          LR T+   + R   
Sbjct: 97  GVGNAYSDEILHAAKLSPFKNAGRLTEEETSRLYEA----------LRTTLTEAVARSRG 146

Query: 84  L--GCYRGLRHRRGLPVRGQRT 103
           +  G  +  + + GL V G RT
Sbjct: 147 IAAGSLKAEK-KSGLRVHG-RT 166


>gi|126459555|ref|YP_001055833.1| DNA topoisomerase VI subunit B [Pyrobaculum calidifontis JCM 11548]
 gi|126249276|gb|ABO08367.1| DNA topoisomerase VI, B subunit [Pyrobaculum calidifontis JCM
           11548]
          Length = 526

 Score = 37.2 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 7   VNIPRAKRVVRA---------LCY-IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V++   K++++A         L      +G  +++         P  +V  L   E++++
Sbjct: 234 VDVDTLKQMIQASRGMTLLEFLTENFDAVGEGTAKAFLEWAGFNPNAKVAGLTPEELVRL 293

Query: 57  RQAIEQ 62
            + ++Q
Sbjct: 294 VEKMKQ 299


>gi|302539979|ref|ZP_07292321.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457597|gb|EFL20690.1| LOW QUALITY PROTEIN: putative formamidopyrimidine-DNA glycosylase
           [Streptomyces himastatinicus ATCC 53653]
          Length = 289

 Score = 37.2 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 17/83 (20%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------I 54
           RI GV   R + V      I GIG   S +I +   + P R    L E E+         
Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLASDLTEEEIAVLYEVMGA 213

Query: 55  QIRQAIEQDYQV-EGDLRRTVAM 76
            +R A+E+   +  GDL+     
Sbjct: 214 TLRDAVERSRGLAAGDLKTEKRS 236


>gi|307328100|ref|ZP_07607280.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces
           violaceusniger Tu 4113]
 gi|306886219|gb|EFN17225.1| DNA-(apurinic or apyrimidinic site) lyase [Streptomyces
           violaceusniger Tu 4113]
          Length = 288

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 17/82 (20%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------I 54
           RI GV   R + V      I GIG   S +I +   + P R    L E E+         
Sbjct: 162 RIKGVL--RDQSV------IAGIGNAYSDEILHAARMSPYRLASDLTEEEIAGVYEAMGA 213

Query: 55  QIRQAIEQDYQV-EGDLRRTVA 75
            +R A+E+ + +   DL+    
Sbjct: 214 TLRSAVERSHGLAATDLKGEKR 235


>gi|260753165|ref|YP_003226058.1| hypothetical protein Za10_0928 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552528|gb|ACV75474.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 232

 Score = 37.2 bits (86), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           L  I G+G K +  I   L I    ++    E+++ +I
Sbjct: 156 LTQIKGLGPK-ANKILAALGITRFSQIAAWTEADIAEI 192


>gi|297582947|ref|YP_003698727.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           selenitireducens MLS10]
 gi|297141404|gb|ADH98161.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           selenitireducens MLS10]
          Length = 274

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            +I GIG     +I     I P++R   L ++ +I++ +A+
Sbjct: 162 TFIAGIGNYLRTEILFITGIHPKKRPADLSDTALIRLAEAV 202


>gi|89896847|ref|YP_520334.1| hypothetical protein DSY4101 [Desulfitobacterium hafniense Y51]
 gi|89336295|dbj|BAE85890.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 272

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   + +I     I PER+   L + E  ++
Sbjct: 167 ISGIGNAYANEILFAAGILPERKTPTLTDGEKERL 201


>gi|71732781|gb|AAZ40016.1| fibronectin binding protein [Clostridium difficile]
 gi|71732807|gb|AAZ40029.1| fibronectin binding protein [Clostridium difficile]
          Length = 141

 Score = 37.2 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 16/40 (40%), Gaps = 4/40 (10%)

Query: 21 YIH----GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I+    GI    +++IC +  +     +  + + +   +
Sbjct: 29 SIYSRFLGISPIIAKEICYRAGVNQNAIIKYISDEQFDSL 68


>gi|168012220|ref|XP_001758800.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689937|gb|EDQ76306.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 52

 Score = 37.2 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 23/52 (44%)

Query: 3  RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVI 54
           I   N+   + V  AL    G+  K    I ++L +    + ++L++ ++ 
Sbjct: 1  YILRTNLVPNEYVEIALIQNFGLSPKKIIQIYDQLGLNDNIKFNKLIKYQIK 52


>gi|225164333|ref|ZP_03726600.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2]
 gi|224801067|gb|EEG19396.1| DNA-formamidopyrimidine glycosylase [Opitutaceae bacterium TAV2]
          Length = 288

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   + +I  + AI P +   +L  +E+ ++
Sbjct: 183 GIGNWMADEILWRSAIHPRQLAGELTPAEIRKL 215


>gi|117165133|emb|CAJ88687.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 287

 Score = 37.2 bits (86), Expect = 0.78,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 12/83 (14%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G   S +I +   + P +    L + E  ++ +A          LR T+   ++R 
Sbjct: 172 IAGVGNAYSDEILHAAKMSPFKLAASLTDEETARLYEA----------LRATLTEAVERS 221

Query: 82  MDLGCYR-GLRHRRGLPVRGQRT 103
             +   R     + GL V G RT
Sbjct: 222 RGVAAGRLKAEKKSGLRVHG-RT 243


>gi|134096732|ref|YP_001102393.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133909355|emb|CAL99467.1| formamidopyrimidine-DNA glycosylase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 275

 Score = 37.2 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           R +R+   L     I GIG   S +I +   + P     +L    V ++   + +   + 
Sbjct: 146 RTERIKTVLTDQSMIAGIGNAYSDEILHAAKLSPYATAGRLDADAVERLHATMRE--ILT 203

Query: 68  GDLRRTVAMNIKRLMDLGCYRGLR-H-RRGLPV 98
             + R++  +  RL       G+R H R GLP 
Sbjct: 204 DAVERSLKQDAARLKAEKR-SGMRVHGRTGLPC 235


>gi|323357079|ref|YP_004223475.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
           StLB037]
 gi|323273450|dbj|BAJ73595.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
           StLB037]
          Length = 287

 Score = 37.2 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI-RQAIEQDYQVEGDLRRTVAMNIKR 80
           I G+G   S +I +   + P      L + EV ++ R  +E   +   + R      +K 
Sbjct: 172 IAGVGNAYSDEILHAAKMSPYALAATLTDDEVDRLFRAMVETLTEAIDEARGKPPAELKD 231

Query: 81  LMDLGCYRGLRHRRGLPVRGQR 102
                       RRG+ V G+R
Sbjct: 232 AK----------RRGMRVHGRR 243


>gi|291450291|ref|ZP_06589681.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291353240|gb|EFE80142.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 129

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 83  LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 123


>gi|329938927|ref|ZP_08288301.1| putative integration host factor [Streptomyces griseoaurantiacus
          M045]
 gi|329301812|gb|EGG45705.1| putative integration host factor [Streptomyces griseoaurantiacus
          M045]
          Length = 80

 Score = 37.2 bits (86), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
          L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 34 LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLERE 74


>gi|188586505|ref|YP_001918050.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351192|gb|ACB85462.1| formamidopyrimidine-DNA glycosylase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 295

 Score = 37.2 bits (86), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN 77
           GIG   + ++     I P R+  +L E EV  + + I Q  ++    R T   +
Sbjct: 191 GIGNIYADEVLFASGIHPARKGEELTEQEVGSLYKTIIQILELGIKYRGTTFSD 244


>gi|215410531|ref|ZP_03419339.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           94_M4241A]
          Length = 160

 Score = 37.2 bits (86), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +AI     +   +RR+V      L
Sbjct: 45  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAIAS--VLSDAVRRSVGQGAAML 102

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 103 KGEKR-SGLRVHARTGLPC 120


>gi|219667324|ref|YP_002457759.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium
           hafniense DCB-2]
 gi|219537584|gb|ACL19323.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium
           hafniense DCB-2]
          Length = 272

 Score = 37.2 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   S +I     I PER+   L + E  ++
Sbjct: 167 ISGIGNAYSNEILFAAGILPERKTPTLTDGERDRL 201


>gi|70607074|ref|YP_255944.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639]
 gi|68567722|gb|AAY80651.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639]
          Length = 532

 Score = 37.2 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 17/36 (47%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           +G  ++  I     I   +++  L + E+ ++ + +
Sbjct: 265 VGDVTADKILELSKISKNKKITNLTDEEISRLVEVM 300


>gi|296268041|ref|YP_003650673.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora
           DSM 43833]
 gi|296090828|gb|ADG86780.1| DNA-(apurinic or apyrimidinic site) lyase [Thermobispora bispora
           DSM 43833]
          Length = 292

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I GIG   S +I +   + P +    L + +V  +  AI
Sbjct: 177 ISGIGDAYSDEILHAARLSPFKLADSLTDDQVAALHSAI 215


>gi|256394482|ref|YP_003116046.1| hypothetical protein Caci_5346 [Catenulispora acidiphila DSM 44928]
 gi|256360708|gb|ACU74205.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928]
          Length = 104

 Score = 36.8 bits (85), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + GIG   ++ I  +L I   RR+  L  +++  + + 
Sbjct: 61  LESMPGIGKVRAKQIMERLDISETRRIRGLGANQIASLERE 101


>gi|312144077|ref|YP_003995523.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp.
           'sapolanicus']
 gi|311904728|gb|ADQ15169.1| formamidopyrimidine-DNA glycosylase [Halanaerobium sp.
           'sapolanicus']
          Length = 276

 Score = 36.8 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68
           I GIG   + +I     I P+R+   L E E  +I    +  +E+     G
Sbjct: 171 IAGIGNIYADEILYLSGIKPDRKADTLSEEEKEKIYFNMKDILEKGIIYGG 221


>gi|226361374|ref|YP_002779152.1| DNA glycosylase [Rhodococcus opacus B4]
 gi|226239859|dbj|BAH50207.1| putative DNA glycosylase [Rhodococcus opacus B4]
          Length = 288

 Score = 36.8 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 2   ARIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ARI      +   V ++L    G+G   S +I +   I P      L E +V  +  A+ 
Sbjct: 161 ARI------KNALVDQSLLA--GVGNAYSDEILHTAKISPFATSRTLPEDQVHVLYDAMR 212

Query: 62  QDYQVEGDLRRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
               +   + R++  +  RL       G+R H R GLP 
Sbjct: 213 S--VLTDAVERSLGQDAARLKGEKR-SGMRVHARTGLPC 248


>gi|256750933|ref|ZP_05491817.1| Helix-hairpin-helix DNA-binding class 1 [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750268|gb|EEU63288.1| Helix-hairpin-helix DNA-binding class 1 [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 332

 Score = 36.8 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIDTAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|297617858|ref|YP_003703017.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297145695|gb|ADI02452.1| formamidopyrimidine-DNA glycosylase [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 267

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           GIG   + +I     + P R   +L E E+ ++  AI++
Sbjct: 164 GIGNIYADEILFAAGLHPARGASELNEYEISRLHAAIKE 202


>gi|172039237|ref|YP_001805738.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142]
 gi|226761669|sp|B1WTF7|FPG_CYAA5 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|171700691|gb|ACB53672.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. ATCC 51142]
          Length = 283

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 22/89 (24%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ--------AIEQDYQVEGDLRRTVA 75
           GIG   + +   K  I P     +L + +V ++R+        AIE+      D R    
Sbjct: 175 GIGNIYADEALFKSGIRPTTLGKELSQPQVKRLREAMIEVLKTAIEEGGTTFSDFRGVTG 234

Query: 76  MNIKRLMDLGCYRGL-----RHRRGLPVR 99
           +N       G Y G+     RH +  P R
Sbjct: 235 IN-------GNYSGVAWVYGRHNQ--PCR 254


>gi|78044278|ref|YP_360470.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|90101299|sp|Q3ABL4|FPG_CARHZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|77996393|gb|ABB15292.1| formamidopyrimidine-DNA glycosylase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 263

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG   + +I  +  + P+R    L E E  ++ +AI +   +  + R
Sbjct: 158 IAGIGNIYADEILFEAGLSPKRIAASLSEDEAEELFKAIRKILALGIEYR 207


>gi|311894807|dbj|BAJ27215.1| hypothetical protein KSE_13870 [Kitasatospora setae KM-6054]
          Length = 111

 Score = 36.8 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   ++ I  +L I   RRV  L  +++  + + 
Sbjct: 65  LESLPGVGKVRAKQIMERLGISESRRVRGLGTNQIASLERE 105


>gi|297544020|ref|YP_003676322.1| helicase, RecD/TraA family [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841795|gb|ADH60311.1| helicase, RecD/TraA family [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 735

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    V+  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGVKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|162455413|ref|YP_001617780.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce
           56']
 gi|161165995|emb|CAN97300.1| DNA-formamidopyrimidine glycosylase [Sorangium cellulosum 'So ce
           56']
          Length = 290

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 10/75 (13%)

Query: 26  GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDLG 85
           G   + ++  +  I P+  V  L E E  ++  AI    +V GD  RT+A     L +  
Sbjct: 177 GDSYADEVLFEARIHPKATVQSLSEEETDRLHAAIA---RVLGDATRTIARRAPALDE-- 231

Query: 86  CYRGLRHRRGLPVRG 100
                R R  L VRG
Sbjct: 232 -----RLRDFLKVRG 241


>gi|145486706|ref|XP_001429359.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396451|emb|CAK61961.1| unnamed protein product [Paramecium tetraurelia]
          Length = 733

 Score = 36.8 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 9/65 (13%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKS-SQDICNKLAIPPERRVHQL-------VESEVIQIRQ 58
           V+    K +  A+    GIG  + +  I    +I P   + +L          EV Q++ 
Sbjct: 359 VDYHNLKPIRIAITGPPGIGKSTIANQISTYFSI-PHITIKELIQEYLNQTSEEVEQLKT 417

Query: 59  AIEQD 63
            +E++
Sbjct: 418 NLEEN 422


>gi|282163419|ref|YP_003355804.1| putative formamidopyrimidine-DNA glycosylase [Methanocella
           paludicola SANAE]
 gi|282155733|dbj|BAI60821.1| putative formamidopyrimidine-DNA glycosylase [Methanocella
           paludicola SANAE]
          Length = 269

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
           I GIG   +QDI     + P+R++  L E E   + +AI  D 
Sbjct: 165 IAGIGNVYAQDILFNAKLHPDRKIPTLTEGERRALFEAIRHDL 207


>gi|117928501|ref|YP_873052.1| putative integration host factor MihF [Acidothermus cellulolyticus
           11B]
 gi|117648964|gb|ABK53066.1| putative integration host factor MihF [Acidothermus cellulolyticus
           11B]
          Length = 113

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 18/46 (39%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           RV   L  + GIG   +  I  +L I   RRV  L   +   +   
Sbjct: 56  RVSALLQALPGIGRARAAQIMERLGIAASRRVRGLGPRQREALVAE 101


>gi|167038184|ref|YP_001665762.1| RecD/TraA family helicase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116593|ref|YP_004186752.1| helicase, RecD/TraA family [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166857018|gb|ABY95426.1| helicase, RecD/TraA family [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929684|gb|ADV80369.1| helicase, RecD/TraA family [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 735

 Score = 36.4 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|307265487|ref|ZP_07547042.1| helicase, RecD/TraA family [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919441|gb|EFN49660.1| helicase, RecD/TraA family [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 735

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|304404451|ref|ZP_07386112.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus
           curdlanolyticus YK9]
 gi|304346258|gb|EFM12091.1| DNA-(apurinic or apyrimidinic site) lyase [Paenibacillus
           curdlanolyticus YK9]
          Length = 271

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   + +IC   +I P  R+  L + E  ++
Sbjct: 164 IAGIGNCYADEICFVASIRPSTRIPALKDEEWERL 198


>gi|167039107|ref|YP_001662092.1| RecD/TraA family helicase [Thermoanaerobacter sp. X514]
 gi|300913303|ref|ZP_07130620.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X561]
 gi|307723683|ref|YP_003903434.1| RecD/TraA family helicase [Thermoanaerobacter sp. X513]
 gi|166853347|gb|ABY91756.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X514]
 gi|300889988|gb|EFK85133.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X561]
 gi|307580744|gb|ADN54143.1| helicase, RecD/TraA family [Thermoanaerobacter sp. X513]
          Length = 735

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|326389597|ref|ZP_08211163.1| helicase, RecD/TraA family [Thermoanaerobacter ethanolicus JW 200]
 gi|325994312|gb|EGD52738.1| helicase, RecD/TraA family [Thermoanaerobacter ethanolicus JW 200]
          Length = 735

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|21219464|ref|NP_625243.1| formamidopyrimidine-DNA glycosylase [Streptomyces coelicolor A3(2)]
 gi|6580659|emb|CAB63194.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
           coelicolor A3(2)]
          Length = 287

 Score = 36.4 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G   S ++ +   + P +    L + E  ++  A          LR T+   ++R 
Sbjct: 172 IAGVGNAYSDEVLHAAKMSPFKLAASLTDEETARLYAA----------LRDTLTEAVERS 221

Query: 82  MDLGCYR-GLRHRRGLPVRGQRT 103
             +   R     + GL V G RT
Sbjct: 222 RGIAAGRLKAEKKSGLRVHG-RT 243


>gi|289577707|ref|YP_003476334.1| helicase, RecD/TraA family [Thermoanaerobacter italicus Ab9]
 gi|289527420|gb|ADD01772.1| helicase, RecD/TraA family [Thermoanaerobacter italicus Ab9]
          Length = 735

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP----------PERRVHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  K  +             + +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVKKFGVDSLNIIETAPERLKEIKGLSDEKIKRICEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLQGYGISTAMAIKIYK 164


>gi|163785136|ref|ZP_02179835.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879597|gb|EDP73402.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 212

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 6/71 (8%)

Query: 9   IPRAKRVVRA-LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           I   K V    L  I GIG   +  I         +RV      E   +  +    Y++ 
Sbjct: 65  IDNLKNVKLEDLTKIKGIGKTKALQILAIAEFA--KRVC---NEEEKTVLSSPSDVYEIV 119

Query: 68  GDLRRTVAMNI 78
            DL+      +
Sbjct: 120 KDLKNERQEKL 130


>gi|319653434|ref|ZP_08007534.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
 gi|317394918|gb|EFV75656.1| DNA glycosylase [Bacillus sp. 2_A_57_CT2]
          Length = 269

 Score = 36.4 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   S +IC +  + P R+  +L E E+  +
Sbjct: 166 GIGNCYSDEICFEAGLLPMRKADELDEDEIKIL 198


>gi|145493391|ref|XP_001432691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399805|emb|CAK65294.1| unnamed protein product [Paramecium tetraurelia]
          Length = 733

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 9/65 (13%)

Query: 7   VNIPRAKRVVRALCYIHGIGFKS-SQDICNKLAIPPERRVHQL-------VESEVIQIRQ 58
           V+    K +  A+    GIG  + +  I    +I P   + +L          EV Q++ 
Sbjct: 359 VDYHNLKPIRIAITGPPGIGKSTIANQISTYFSI-PHITIKELIQEYLNQTSEEVEQLKT 417

Query: 59  AIEQD 63
            +E++
Sbjct: 418 NLEEN 422


>gi|256833167|ref|YP_003161894.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603]
 gi|256686698|gb|ACV09591.1| dimethyladenosine transferase [Jonesia denitrificans DSM 20603]
          Length = 600

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           R K + +AL  I G   + +  I     +PP  R  QL   +  +I +A+
Sbjct: 235 RRKTLRQALAGIAG-NSQRASTILEAAGVPPTARGEQLTIHDFARIAEAM 283


>gi|307154764|ref|YP_003890148.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822]
 gi|306984992|gb|ADN16873.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7822]
          Length = 277

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
           GIG   + +   K  I P      L   ++ ++R AI    Q   D
Sbjct: 174 GIGNIYADEALFKSGIKPNAIACSLTPEQLEKLRLAICDVLQTSID 219


>gi|90961465|ref|YP_535381.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
           UCC118]
 gi|227890555|ref|ZP_04008360.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
           11741]
 gi|122449230|sp|Q1WUN7|FPG_LACS1 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|90820659|gb|ABD99298.1| Formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius
           UCC118]
 gi|227867493|gb|EEJ74914.1| formamidopyrimidine-DNA glycosylase [Lactobacillus salivarius ATCC
           11741]
          Length = 276

 Score = 36.4 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 11  RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
           R K +  AL     + G+G   + ++     I PE   ++L E EV  +R  I ++ 
Sbjct: 154 RKKAIKNALLDQTIVAGLGNIYADEVLWMSKIHPETPANKLTEEEVKVLRDNIIKEL 210


>gi|332181038|gb|AEE16726.1| Ribosomal RNA small subunit methyltransferase A [Treponema
           brennaborense DSM 12168]
          Length = 294

 Score = 36.4 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 11  RAKRVVRALCYIHGIGFK--SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           R K V   L   +        + D+ +   I P++R  +L   +++Q+   I   +  E
Sbjct: 240 RRKTVKNNLTAFY---RNAEKAADVLSAAGIDPQQRAERLTVEQLLQLSD-ISNQHITE 294


>gi|18313187|ref|NP_559854.1| DNA topoisomerase VI subunit B [Pyrobaculum aerophilum str. IM2]
 gi|28380201|sp|Q8ZVM0|TOP6B_PYRAE RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|18160701|gb|AAL64036.1| DNA topoisomerase VI (type II ) subunit b [Pyrobaculum aerophilum
           str. IM2]
          Length = 527

 Score = 36.0 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 10/66 (15%)

Query: 7   VNIPRAKRVV---RALC-------YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V++   K+++   R L            +G  +++         P  +V  L   E++++
Sbjct: 232 VDVDTLKQMIQESRGLTLLEFLMENFDAVGEGTAKAFLEWAGFNPNAKVTALTPEELVKL 291

Query: 57  RQAIEQ 62
              ++Q
Sbjct: 292 VDKMKQ 297


>gi|313898751|ref|ZP_07832286.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein
           [Clostridium sp. HGF2]
 gi|312956635|gb|EFR38268.1| Formamidopyrimidine-DNA glycosylase H2TH domain protein
           [Clostridium sp. HGF2]
          Length = 273

 Score = 36.0 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG    QDI     + P+R+++ L + E+  +
Sbjct: 173 GIGNGVCQDILFYAGLHPKRKMNTLTKDEINTL 205


>gi|218441992|ref|YP_002380321.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424]
 gi|218174720|gb|ACK73453.1| formamidopyrimidine-DNA glycosylase [Cyanothece sp. PCC 7424]
          Length = 277

 Score = 36.0 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
           GIG   + +   K  I P+     L   ++ ++R AI    Q   D
Sbjct: 174 GIGNIYADEALFKSGIRPDAIACSLTPQQLEKLRWAICDVLQTSID 219


>gi|284161856|ref|YP_003400479.1| Fibronectin-binding A domain protein [Archaeoglobus profundus DSM
           5631]
 gi|284011853|gb|ADB57806.1| Fibronectin-binding A domain protein [Archaeoglobus profundus DSM
           5631]
          Length = 626

 Score = 36.0 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G   +++ C +  I   +    L + E  +I
Sbjct: 167 GLGGLFAEETCLRAGIDKNKLGKDLSDEEFERI 199


>gi|224984055|ref|YP_002641357.1| putative lipoprotein [Borrelia valaisiana VS116]
 gi|224497202|gb|ACN52833.1| putative lipoprotein [Borrelia valaisiana VS116]
          Length = 356

 Score = 36.0 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 17/93 (18%)

Query: 10  PRAKRVVR----ALCYIHGIGFKSSQDICNKLAIPPE---------RRVHQLVESEVIQI 56
              K+       AL  +  IG  SS ++  K    P          +   +L E +V ++
Sbjct: 51  DENKKGNITSKVALAKV--IGHASSSEL--KFNDDPNSSFSEYYQEKTTGKLTEEDVDKL 106

Query: 57  RQAIEQDYQVEGDLRRTVAMNIKRLMDLGCYRG 89
           +   ++    +G L      NI+    +  Y G
Sbjct: 107 KVFFDKTITYQGVLDSIYNQNIRYYNTIATYSG 139


>gi|85860946|ref|YP_463148.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB]
 gi|85724037|gb|ABC78980.1| formamidopyrimidine-DNA glycosylase [Syntrophus aciditrophicus SB]
          Length = 311

 Score = 36.0 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I GIG   + +I  +  + P RR   L   +  ++  A+
Sbjct: 206 IGGIGNIYACEILYRAGLNPLRRTADLTSEDWRRVGSAM 244


>gi|15840367|ref|NP_335404.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           CDC1551]
 gi|148822152|ref|YP_001286906.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           F11]
 gi|253800030|ref|YP_003033031.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           1435]
 gi|254231252|ref|ZP_04924579.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C]
 gi|308231675|ref|ZP_07413410.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu001]
 gi|308370120|ref|ZP_07420350.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu002]
 gi|308372976|ref|ZP_07430625.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu005]
 gi|308379911|ref|ZP_07488077.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu011]
 gi|13880533|gb|AAK45218.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           CDC1551]
 gi|124600311|gb|EAY59321.1| hypothetical protein TBCG_00935 [Mycobacterium tuberculosis C]
 gi|148720679|gb|ABR05304.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis F11]
 gi|253321533|gb|ACT26136.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           1435]
 gi|308216422|gb|EFO75821.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu001]
 gi|308325248|gb|EFP14099.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu002]
 gi|308339239|gb|EFP28090.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu005]
 gi|308363225|gb|EFP52076.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu011]
          Length = 166

 Score = 36.0 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 51  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 108

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 109 KGEKR-SGLRVHARTGLPC 126


>gi|239906333|ref|YP_002953074.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
 gi|239796199|dbj|BAH75188.1| formamidopyrimidine-DNA glycosylase [Desulfovibrio magneticus RS-1]
          Length = 281

 Score = 36.0 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 14  RVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           R+  AL     I GIG   + +      I P+     L  ++  ++ +A++ 
Sbjct: 165 RIKAALLDQTVIAGIGNIYADESLFAARIRPDTPAKDLTPAQRQRLLKAVQN 216


>gi|187764102|ref|YP_001876551.1| ribosomal protein S13 [Dictyostelium fasciculatum]
 gi|160688810|gb|ABX45225.1| ribosomal protein S13 [Dictyostelium fasciculatum]
          Length = 166

 Score = 36.0 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTV---AMN 77
            I G+G   ++ +C+     P   V ++     +++ + I + ++   D    V     N
Sbjct: 24  KIAGMGESMTKRLCSMCGFLPMTYVSKISTKGGLRLMR-IYKSFKGLSDYSYYVYRKRFN 82

Query: 78  IKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKK 112
            +R  +   YR  R  +G PV  QRT TN +   K
Sbjct: 83  QRRSKE-RAYRSQRFTKGYPV-SQRTRTNGKIASK 115


>gi|239978113|ref|ZP_04700637.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074]
 gi|291450010|ref|ZP_06589400.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074]
 gi|291352959|gb|EFE79861.1| formamidopyrimidine-DNA glycosylase [Streptomyces albus J1074]
          Length = 286

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           I GIG   S +I +   + P +   +L + E   + +A+     
Sbjct: 171 IAGIGNAYSDEILHAARLSPFKNAGRLTDEETTALYEALRTTLT 214


>gi|120405833|ref|YP_955662.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119958651|gb|ABM15656.1| DNA-formamidopyrimidine glycosylase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 297

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   + P    ++L  S+++ +  A+     +   + R+V      L
Sbjct: 182 IAGIGNAYSDEILHVAKLSPFATANKLTPSQLVTLHDAMIS--VLTDAVTRSVGQQAATL 239

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 240 KGEKR-SGLRVHARTGLPC 257


>gi|254444020|ref|ZP_05057496.1| Formamidopyrimidine-DNA glycosylase H2TH domain family
           [Verrucomicrobiae bacterium DG1235]
 gi|198258328|gb|EDY82636.1| Formamidopyrimidine-DNA glycosylase H2TH domain family
           [Verrucomicrobiae bacterium DG1235]
          Length = 266

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G   + +I  +  I P+RR+  L + E+  +
Sbjct: 171 GVGNWMADEILWRARIRPDRRLGSLSKGELDAL 203


>gi|153853290|ref|ZP_01994699.1| hypothetical protein DORLON_00685 [Dorea longicatena DSM 13814]
 gi|149754076|gb|EDM64007.1| hypothetical protein DORLON_00685 [Dorea longicatena DSM 13814]
          Length = 579

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 10  PRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           P +K +  ++    GI    +++IC    +      H L E  +  +
Sbjct: 190 PVSKAIYSSMT---GISPVIAEEICYLAGVDSSMTAHDLSEDVLTHL 233


>gi|317127569|ref|YP_004093851.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472517|gb|ADU29120.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus
           cellulosilyticus DSM 2522]
          Length = 264

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 26/40 (65%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           I GIG   S +IC +  + PER++++L   EV+ + Q+I+
Sbjct: 162 ISGIGNLYSDEICYEARLLPERKMNELSTQEVLDLFQSIQ 201


>gi|182413447|ref|YP_001818513.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
 gi|177840661|gb|ACB74913.1| DNA-formamidopyrimidine glycosylase [Opitutus terrae PB90-1]
          Length = 301

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               + RAL       GIG   S +I +   + P     +L   E+ ++
Sbjct: 151 ENHTLKRALTDPQLFSGIGNSYSDEILHAAKLSPVTLTQKLSPEEIARL 199


>gi|320527164|ref|ZP_08028351.1| dimethyladenosine transferase [Solobacterium moorei F0204]
 gi|320132492|gb|EFW25035.1| dimethyladenosine transferase [Solobacterium moorei F0204]
          Length = 280

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            + +I  K  IP  +R  +L   E+ QI + +
Sbjct: 248 KATEILEKANIPVNKRAQELTIDELKQIHEVM 279


>gi|270290447|ref|ZP_06196672.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
 gi|304384671|ref|ZP_07367017.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
           20284]
 gi|270281228|gb|EFA27061.1| formamidopyrimidine-DNA glycosylase [Pediococcus acidilactici 7_4]
 gi|304328865|gb|EFL96085.1| DNA-formamidopyrimidine glycosylase [Pediococcus acidilactici DSM
           20284]
          Length = 279

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 23/39 (58%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I G+G   + ++     I P+RR + L ++E+  +R++I
Sbjct: 168 IAGLGNIYADEVLWLSKIHPQRRSNSLTDAEIKLLRESI 206


>gi|227328064|ref|ZP_03832088.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 269

 Score = 36.0 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 38/111 (34%), Gaps = 30/111 (27%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66
             K VV       G+G   + +      I P+R    L E++   +   I+Q  Q+    
Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRTAGSLNENDAAILVSVIKQVLQLSIEQ 212

Query: 67  -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102
               LR  +  + K      +L  Y G   R G P R           GQR
Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTLIETAKHGQR 259


>gi|16800667|ref|NP_470935.1| formamidopyrimidine-DNA glycosylase [Listeria innocua Clip11262]
 gi|21362544|sp|Q92BF1|FPG_LISIN RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|16414086|emb|CAC96830.1| mutM [Listeria innocua Clip11262]
          Length = 273

 Score = 36.0 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G   + +IC +  + PER  + L + E+ +I
Sbjct: 170 GVGNIYADEICFEAKVHPERAANSLSDKEINRI 202


>gi|226290161|gb|EEH45645.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 385

 Score = 36.0 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 13  KRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           KRV   AL      I GIG     +I     I PE+  + L ES++ Q+  AI 
Sbjct: 182 KRVPIKALLLDQTNISGIGNWMGDEILYHAKIHPEQYSNTLQESQIEQLYSAIN 235


>gi|91773184|ref|YP_565876.1| DNA topoisomerase VI subunit B [Methanococcoides burtonii DSM 6242]
 gi|121689247|sp|Q12WQ0|TOP6B_METBU RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName:
           Full=Type II DNA topoisomerase VI subunit B;
           Short=TopoVI-B
 gi|91712199|gb|ABE52126.1| DNA topoisomerase, type VI subunit B [Methanococcoides burtonii DSM
           6242]
          Length = 622

 Score = 36.0 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           IG  ++++IC    +  E    +L   +  ++  A ++
Sbjct: 269 IGLLTAEEICKAAGLDTEMLPSKLTRDQTKKLLDAFKK 306


>gi|285808428|gb|ADC35954.1| putative fapy-DNA glycosylase [uncultured bacterium 98]
          Length = 299

 Score = 35.6 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               + RAL       GIG   S +I +   + P +    L   E  ++
Sbjct: 151 ENHTLKRALTDPHLFSGIGNAYSDEILHAAGLSPFKLTRSLTGDEGRKL 199


>gi|119872357|ref|YP_930364.1| DNA topoisomerase VI subunit B [Pyrobaculum islandicum DSM 4184]
 gi|119673765|gb|ABL88021.1| DNA topoisomerase VI, B subunit [Pyrobaculum islandicum DSM 4184]
          Length = 528

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           +G  +++         P  +   L   E++++ + ++Q
Sbjct: 263 VGEGTAKAFLEWAGFNPNTKTTALTPEEIVRLVEKMKQ 300


>gi|229543047|ref|ZP_04432107.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1]
 gi|229327467|gb|EEN93142.1| DNA-formamidopyrimidine glycosylase [Bacillus coagulans 36D1]
          Length = 267

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           GIG + S +I     + P+++   L   ++ ++ ++I 
Sbjct: 166 GIGNRYSDEILWHAQLRPDQKAGHLDNQQLARLYESIR 203


>gi|167967805|ref|ZP_02550082.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis H37Ra]
 gi|215426213|ref|ZP_03424132.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T92]
 gi|215429803|ref|ZP_03427722.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           EAS054]
 gi|215445090|ref|ZP_03431842.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T85]
 gi|218752609|ref|ZP_03531405.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis GM
           1503]
 gi|254363871|ref|ZP_04979917.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549924|ref|ZP_05140371.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|289555276|ref|ZP_06444486.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           605]
 gi|308370542|ref|ZP_07421943.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu003]
 gi|308371805|ref|ZP_07426308.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu004]
 gi|308374140|ref|ZP_07435023.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu006]
 gi|308375296|ref|ZP_07443456.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu007]
 gi|308376555|ref|ZP_07439277.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu008]
 gi|308377554|ref|ZP_07479648.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu009]
 gi|308378766|ref|ZP_07483841.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu010]
 gi|308397511|ref|ZP_07492578.2| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu012]
 gi|134149385|gb|EBA41430.1| hypothetical formamidopyrimidine-DNA glycosylase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|289439908|gb|EFD22401.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           605]
 gi|308331620|gb|EFP20471.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu003]
 gi|308335433|gb|EFP24284.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu004]
 gi|308342884|gb|EFP31735.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu006]
 gi|308346800|gb|EFP35651.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu007]
 gi|308350716|gb|EFP39567.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu008]
 gi|308355377|gb|EFP44228.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu009]
 gi|308359316|gb|EFP48167.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu010]
 gi|308366882|gb|EFP55733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           SUMu012]
 gi|328459772|gb|AEB05195.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           4207]
          Length = 160

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 45  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 103 KGEKR-SGLRVHARTGLPC 120


>gi|152992646|ref|YP_001358367.1| hypothetical protein SUN_1053 [Sulfurovum sp. NBC37-1]
 gi|151424507|dbj|BAF72010.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 476

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
            K+V + L  + GIG K ++ I +K        VH L E+   ++ + I 
Sbjct: 409 EKKVEKLLTSVEGIGKKKAEKIMDK--FDTTELVHAL-ETAPEKLVEEIS 455


>gi|303234944|ref|ZP_07321569.1| flavoprotein family protein [Finegoldia magna BVS033A4]
 gi|302494062|gb|EFL53843.1| flavoprotein family protein [Finegoldia magna BVS033A4]
          Length = 407

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 3   RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49
           RI  V++   K         +L Y         G I     +++ N+  I  +  V +L 
Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGINYDINVCELS 318

Query: 50  ESEVIQIRQAIEQ 62
           + E+ ++   ++ 
Sbjct: 319 KEEIYKLAHTLKN 331


>gi|254478840|ref|ZP_05092205.1| helicase, RecD/TraA family [Carboxydibrachium pacificum DSM 12653]
 gi|214035202|gb|EEB75911.1| helicase, RecD/TraA family [Carboxydibrachium pacificum DSM 12653]
          Length = 735

 Score = 35.6 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP--------PERR--VHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  +  +         P R   +  L + ++ +I +A E    ++  + 
Sbjct: 88  IPGIGPVTARKIVERFGLDSLHVIETEPHRLREIKGLSDEKIKRISEAYEMQKGIKEVMV 147

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 148 FLHQFGISSHMAIKIYK 164



 Score = 33.7 bits (77), Expect = 9.5,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 22  IHGIGFKSSQDICNKLAIPPE 42
           I GIGFK++  I   L I P 
Sbjct: 185 IFGIGFKTADKIAESLGIDPH 205


>gi|241760865|ref|ZP_04758954.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374484|gb|EER63945.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 232

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           L  I G+G K +  I   L I    ++    ++++ +I
Sbjct: 156 LTQIKGLGPK-ANKILAGLGITRFSQIAAWTDADIAEI 192


>gi|20806994|ref|NP_622165.1| exonuclease V subunit alpha [Thermoanaerobacter tengcongensis MB4]
 gi|20515477|gb|AAM23769.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase
           superfamily I member [Thermoanaerobacter tengcongensis
           MB4]
          Length = 765

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 22  IHGIGFKSSQDICNKLAIP--------PERR--VHQLVESEVIQIRQAIEQDYQVEGDLR 71
           I GIG  +++ I  +  +         P R   +  L + ++ +I +A E    ++  + 
Sbjct: 118 IPGIGPVTARKIVERFGLDSLHVIETEPHRLREIKGLSDEKIKRISEAYEMQKGIKEVMV 177

Query: 72  RTVAMNIKRLMDLGCYR 88
                 I   M +  Y+
Sbjct: 178 FLHQFGISSHMAIKIYK 194



 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query: 22  IHGIGFKSSQDICNKLAIPPE 42
           I GIGFK++  I   L I P 
Sbjct: 215 IFGIGFKTADKIAESLGIDPH 235


>gi|259500703|ref|ZP_05743605.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners DSM
           13335]
 gi|302191393|ref|ZP_07267647.1| hypothetical protein LineA_05217 [Lactobacillus iners AB-1]
 gi|259168087|gb|EEW52582.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners DSM
           13335]
          Length = 780

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    Q+   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|300214505|gb|ADJ78921.1| Exodeoxyribonuclease V alpha chain [Lactobacillus salivarius CECT
           5713]
          Length = 154

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 8   NIPRAKRVVRA-LCY--IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
            +P  K  V A L      GIG K+++ I  KL +        ++ +++ ++ +
Sbjct: 91  ELPSTKDGVIAYLSSDEFVGIGKKTAEKIVKKLGVD----AIDVLNNDMDKLEE 140


>gi|240172877|ref|ZP_04751536.1| hypothetical protein MkanA1_26427 [Mycobacterium kansasii ATCC
           12478]
          Length = 287

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L   ++  +  A+     +   + R+V      L
Sbjct: 172 IAGIGNAYSDEILHVAKISPFATAGKLSAGQLATLHDAMVS--VLSDAVHRSVGQGAAML 229

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 230 KGEKR-SGLRVHARTGLPC 247


>gi|297162473|gb|ADI12185.1| formamidopyrimidine-DNA glycosylase [Streptomyces bingchenggensis
           BCW-1]
          Length = 240

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%)

Query: 3   RIAGVNIPRAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           R+AG    R  RV   L     + G+G     +I  +  I P RR  +L   E  ++ +A
Sbjct: 125 RLAG----RHGRVKATLTDQSVVAGLGNLLGDEILWRAGINPARRTDELTPEERTRLERA 180

Query: 60  IE 61
           + 
Sbjct: 181 MR 182


>gi|67925991|ref|ZP_00519260.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501]
 gi|67852167|gb|EAM47657.1| Formamidopyrimidine-DNA glycolase [Crocosphaera watsonii WH 8501]
          Length = 278

 Score = 35.6 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   + +   K  I P      L   +V ++R+A+ +  +   D   T   + + +  
Sbjct: 175 GMGNIYADEALFKSGILPTTLGKDLTPQQVKRLREAMIEVLKTAIDQGGTTFSDFRGVTG 234

Query: 84  L-GCYRGL-----RHRRGLPVR 99
           + G Y G+     RH++  P R
Sbjct: 235 INGNYGGVAWVYGRHKQ--PCR 254


>gi|298530672|ref|ZP_07018074.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510046|gb|EFI33950.1| formamidopyrimidine-DNA glycosylase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 273

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   + +      I P  R   L   ++  +
Sbjct: 166 IAGIGNIYADEALYMAGIHPCTRAVDLSGDQLEAL 200


>gi|15608084|ref|NP_215459.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           H37Rv]
 gi|31792133|ref|NP_854626.1| formamidopyrimidine-DNA glycosylase [Mycobacterium bovis AF2122/97]
 gi|121636869|ref|YP_977092.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660723|ref|YP_001282246.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           H37Ra]
 gi|224989340|ref|YP_002644027.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|260185844|ref|ZP_05763318.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199964|ref|ZP_05767455.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T46]
 gi|260204150|ref|ZP_05771641.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           K85]
 gi|289442359|ref|ZP_06432103.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T46]
 gi|289446514|ref|ZP_06436258.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289573573|ref|ZP_06453800.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           K85]
 gi|289749468|ref|ZP_06508846.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T92]
 gi|289753000|ref|ZP_06512378.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           EAS054]
 gi|289757029|ref|ZP_06516407.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           T85]
 gi|289761078|ref|ZP_06520456.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM
           1503]
 gi|294996428|ref|ZP_06802119.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           210]
 gi|297633465|ref|ZP_06951245.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           4207]
 gi|297730450|ref|ZP_06959568.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           R506]
 gi|313657778|ref|ZP_07814658.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis KZN
           V2475]
 gi|1524218|emb|CAB01977.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|31617721|emb|CAD93830.1| POSSIBLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE)
           [Mycobacterium bovis AF2122/97]
 gi|121492516|emb|CAL70984.1| Possible formamidopyrimidine-DNA glycosylase [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148504875|gb|ABQ72684.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           H37Ra]
 gi|224772453|dbj|BAH25259.1| putative formamidopyrimidine-DNA glycosylase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|289415278|gb|EFD12518.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T46]
 gi|289419472|gb|EFD16673.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           CPHL_A]
 gi|289538004|gb|EFD42582.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           K85]
 gi|289690055|gb|EFD57484.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T92]
 gi|289693587|gb|EFD61016.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           EAS054]
 gi|289708584|gb|EFD72600.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis GM
           1503]
 gi|289712593|gb|EFD76605.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           T85]
 gi|323720655|gb|EGB29733.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904835|gb|EGE51768.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           W-148]
          Length = 158

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 43  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 100

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 101 KGEKR-SGLRVHARTGLPC 118


>gi|169824216|ref|YP_001691827.1| NAD(FAD)-utilizing dehydrogenase [Finegoldia magna ATCC 29328]
 gi|167831021|dbj|BAG07937.1| NAD(FAD)-utilizing dehydrogenase [Finegoldia magna ATCC 29328]
          Length = 407

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 3   RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49
           RI  V++   K         +L Y         G I     +++ N+  I  +  V +L 
Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGINYDINVCELS 318

Query: 50  ESEVIQIRQAIEQ 62
           + E+ ++   ++ 
Sbjct: 319 KEEIYKLAHTLKN 331


>gi|116333678|ref|YP_795205.1| formamidopyrimidine-DNA glycosylase [Lactobacillus brevis ATCC 367]
 gi|116099025|gb|ABJ64174.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
           glycosylase [Lactobacillus brevis ATCC 367]
          Length = 286

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 1   MARIAGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR 57
           M +I G      K V   L     I G+G   + ++     I P   V  L  S++ ++R
Sbjct: 148 MVKIFGK---SHKVVKPFLLDQTRIAGLGNIYADEVLWLSKINPLTPVDTLTPSQLSELR 204

Query: 58  QAI 60
           Q I
Sbjct: 205 QNI 207


>gi|115391091|ref|XP_001213050.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114193974|gb|EAU35674.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 363

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 11  RAKRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           R+K+V   AL      I GIG     +I     I PE+  + L + ++ ++  AI
Sbjct: 174 RSKKVPIKALLLDQANISGIGNWMGDEILYHAKIHPEQYSNTLNDDQIKELNSAI 228


>gi|210612278|ref|ZP_03289226.1| hypothetical protein CLONEX_01427 [Clostridium nexile DSM 1787]
 gi|210151652|gb|EEA82659.1| hypothetical protein CLONEX_01427 [Clostridium nexile DSM 1787]
          Length = 578

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               GI    +++IC    I  E    +L E  +I +
Sbjct: 197 TSFTGISPVVAEEICYIAGIDSEITPKELSEDVLIHL 233


>gi|151941253|gb|EDN59631.1| structural maintenance of chromosomes [Saccharomyces cerevisiae
           YJM789]
          Length = 1418

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67
             K +  +   + G G   ++ +  KL      +V      EV +I + +   E +++V 
Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868

Query: 68  GDLRRTVAMNIKRLMD 83
            D    +   +K+L D
Sbjct: 869 SDTVHEMEEELKKLRD 884


>gi|6323115|ref|NP_013187.1| Smc4p [Saccharomyces cerevisiae S288c]
 gi|29427672|sp|Q12267|SMC4_YEAST RecName: Full=Structural maintenance of chromosomes protein 4
 gi|1256888|gb|AAB67590.1| Ylr086wp [Saccharomyces cerevisiae]
 gi|1360455|emb|CAA97646.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285813506|tpg|DAA09402.1| TPA: Smc4p [Saccharomyces cerevisiae S288c]
          Length = 1418

 Score = 35.6 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67
             K +  +   + G G   ++ +  KL      +V      EV +I + +   E +++V 
Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868

Query: 68  GDLRRTVAMNIKRLMD 83
            D    +   +K+L D
Sbjct: 869 SDTVHEMEEELKKLRD 884


>gi|190406122|gb|EDV09389.1| structural maintenance of chromosome 4 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 1418

 Score = 35.6 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67
             K +  +   + G G   ++ +  KL      +V      EV +I + +   E +++V 
Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868

Query: 68  GDLRRTVAMNIKRLMD 83
            D    +   +K+L D
Sbjct: 869 SDTVHEMEEELKKLRD 884


>gi|113474804|ref|YP_720865.1| formamidopyrimidine-DNA glycosylase [Trichodesmium erythraeum
           IMS101]
 gi|123352603|sp|Q117D2|FPG_TRIEI RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|110165852|gb|ABG50392.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Trichodesmium erythraeum IMS101]
          Length = 300

 Score = 35.6 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 11  RAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           R + +  AL     I G+G   + +      I P      L E ++ Q+  AI +  Q 
Sbjct: 181 RHRPIKTALLDQTTIAGLGNIYADEALFLSGIRPTTICKDLTEKQIEQLHLAILKVLQT 239


>gi|323347562|gb|EGA81830.1| Smc4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 1418

 Score = 35.6 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVE 67
             K +  +   + G G   ++ +  KL      +V      EV +I + +   E +++V 
Sbjct: 811 DGKLIDISGT-MSGGGNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVA 868

Query: 68  GDLRRTVAMNIKRLMD 83
            D    +   +K+L D
Sbjct: 869 SDTVHEMEEELKKLRD 884


>gi|312875454|ref|ZP_07735457.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2053A-b]
 gi|311088965|gb|EFQ47406.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2053A-b]
          Length = 780

 Score = 35.6 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    Q+   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|212542389|ref|XP_002151349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066256|gb|EEA20349.1| formamidopyrimidine-DNA glycosylase, putative [Penicillium
           marneffei ATCC 18224]
          Length = 362

 Score = 35.6 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 11  RAKRVVR-AL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           ++KRV   AL      I GIG     +I     I PE+  + L + ++ Q+  +I+
Sbjct: 174 KSKRVPIKALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSID 229


>gi|325912826|ref|ZP_08175204.1| helicase, RecD/TraA family [Lactobacillus iners UPII 60-B]
 gi|325477819|gb|EGC80953.1| helicase, RecD/TraA family [Lactobacillus iners UPII 60-B]
          Length = 780

 Score = 35.6 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    Q+   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|320159790|ref|YP_004173014.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1]
 gi|319993643|dbj|BAJ62414.1| dimethyladenosine transferase [Anaerolinea thermophila UNI-1]
          Length = 305

 Score = 35.6 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 11  RAKRVVRALCYIHGIGFK--SSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           + K +  AL    G+G+K   ++ +  +  I P RR   L   E   +  A
Sbjct: 247 KRKTLRNALSS--GLGWKGERAESLLRQAGIDPNRRAESLALEEWALLVDA 295


>gi|315653462|ref|ZP_07906383.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners ATCC
           55195]
 gi|315489153|gb|EFU78794.1| exodeoxyribonuclease V alpha subunit [Lactobacillus iners ATCC
           55195]
          Length = 780

 Score = 35.6 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    Q+   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|309807244|ref|ZP_07701216.1| helicase, RecD/TraA family [Lactobacillus iners LactinV 03V1-b]
 gi|308166382|gb|EFO68589.1| helicase, RecD/TraA family [Lactobacillus iners LactinV 03V1-b]
          Length = 780

 Score = 35.6 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    Q+   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDQLGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|119487791|ref|ZP_01621300.1| DNA repair protein RadC [Lyngbya sp. PCC 8106]
 gi|119455624|gb|EAW36761.1| DNA repair protein RadC [Lyngbya sp. PCC 8106]
          Length = 243

 Score = 35.6 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           L  IHGIG   +  I     I   +RV QL  SE   I         +  DL        
Sbjct: 79  LTQIHGIGPAKATTIIAA--IELGKRVFQLRPSEKAIIETPQAAADALSQDLMWQTQERF 136

Query: 79  KRL 81
             L
Sbjct: 137 AVL 139


>gi|254425007|ref|ZP_05038725.1| Formamidopyrimidine-DNA glycosylase H2TH domain family
           [Synechococcus sp. PCC 7335]
 gi|196192496|gb|EDX87460.1| Formamidopyrimidine-DNA glycosylase H2TH domain family
           [Synechococcus sp. PCC 7335]
          Length = 277

 Score = 35.6 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 11/77 (14%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA-IEQDYQ------VEGDLRRTVAM 76
           GIG     +I     + P+ R     + ++  +  A I   YQ      V  DL     +
Sbjct: 167 GIGNYLRSEILFVAQLHPQMRPIDCTDEQLFTLANASISIAYQSYRYKGVTNDLDLANRL 226

Query: 77  NIKRLMDLGCYRGLRHR 93
             K L     YR  R+R
Sbjct: 227 KAKGL----SYREYRYR 239


>gi|342763|gb|AAA70291.1| ribosomal protein S13 [Oenothera berteroana]
          Length = 26

 Score = 35.6 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/22 (68%), Positives = 19/22 (86%)

Query: 91  RHRRGLPVRGQRTHTNARTRKK 112
           RH+ G P+RGQR+HTNART +K
Sbjct: 1   RHQDGSPLRGQRSHTNARTSRK 22


>gi|108760481|ref|YP_634069.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622]
 gi|108464361|gb|ABF89546.1| formamidopyrimidine-DNA glycosylase [Myxococcus xanthus DK 1622]
          Length = 290

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 12  AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
            K +  AL     I G+G   + +   +  + P R+   L   E  ++ QAI       
Sbjct: 153 RKELKVALMDQERISGLGNIHAAEALFRAGLHPSRQPGSLTPDEWKRLVQAIRATIDFG 211


>gi|158320452|ref|YP_001512959.1| fibronectin-binding A domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158140651|gb|ABW18963.1| Fibronectin-binding A domain protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 593

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 15  VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           + +AL    HGI    S++IC   +I  +  +  L E  +  I
Sbjct: 194 LYKALYTSFHGISPLISREICFVSSIDEDILLTNLSEDNLKSI 236


>gi|297587494|ref|ZP_06946138.1| pyridine nucleotide-disulfide oxidoreductase [Finegoldia magna ATCC
           53516]
 gi|297574183|gb|EFH92903.1| pyridine nucleotide-disulfide oxidoreductase [Finegoldia magna ATCC
           53516]
          Length = 407

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 3   RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49
           RI  V++   K         +L Y         G I     +++ N+  I  +  V +L 
Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQAGISYDINVCELS 318

Query: 50  ESEVIQIRQAIEQ 62
           + E+ ++   ++ 
Sbjct: 319 KEEIYKLAHTLKN 331


>gi|168050039|ref|XP_001777468.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671199|gb|EDQ57755.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 259

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGD 69
           I GIG     ++     I PE+    L E EV ++    R+ +E+   V+ D
Sbjct: 182 IAGIGNWVGDEVLYHAKIHPEQSASSLKEEEVTRLHASVREVLEKAISVDAD 233


>gi|294497645|ref|YP_003561345.1| endonuclease VIII [Bacillus megaterium QM B1551]
 gi|294347582|gb|ADE67911.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or
           apyrimidinic site) lyase nei) [Bacillus megaterium QM
           B1551]
          Length = 272

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA----IEQDYQVEG 68
           I GIG     +I     I P  R     E ++ +  +A    ++Q Y+  G
Sbjct: 164 IAGIGNYLRSEILFVAGINPAARPVDCTEEQLKKAAEATISLVKQSYETGG 214


>gi|326774165|ref|ZP_08233447.1| phosphomannomutase [Actinomyces viscosus C505]
 gi|326636304|gb|EGE37208.1| phosphomannomutase [Actinomyces viscosus C505]
          Length = 579

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 13/79 (16%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAI------------PPER-RVHQLVESEVIQIRQAIE 61
           V   L  +HG+G  + +++  +                P+   V      E   +  A++
Sbjct: 243 VRIVLTAMHGVGGATCREVLARAGFTDVVEVAEQFEPDPDFPTVAFPNPEEPGALDLALD 302

Query: 62  QDYQVEGDLRRTVAMNIKR 80
           +  +VE DL      +  R
Sbjct: 303 KARKVEADLVIANDPDADR 321


>gi|229820532|ref|YP_002882058.1| hypothetical protein Bcav_2041 [Beutenbergia cavernae DSM 12333]
 gi|229566445|gb|ACQ80296.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
          Length = 103

 Score = 35.2 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           +VV  L  + G+G  +++ I +++ I   RRV  L   +   + +
Sbjct: 56  KVVALLESLPGVGKVTARQIMSEVGISESRRVRGLGPHQAAALVE 100


>gi|289744675|ref|ZP_06504053.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           02_1987]
 gi|289685203|gb|EFD52691.1| formamidopyrimidine-DNA-glycosylase [Mycobacterium tuberculosis
           02_1987]
          Length = 166

 Score = 35.2 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 51  IAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 108

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 109 KGEKR-SGLRVHARTGLPC 126


>gi|226305561|ref|YP_002765521.1| phosphoglucomutase [Rhodococcus erythropolis PR4]
 gi|226184678|dbj|BAH32782.1| putative phosphoglucomutase [Rhodococcus erythropolis PR4]
          Length = 530

 Score = 35.2 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 1   MARIAGVNIP--RAKRVVRALCYIHGIGFKSSQDICNKLAI 39
           +ARIA   +P   A+ +  AL  +HG+G +++         
Sbjct: 197 IARIA--TLPHGDARSIRIALTAMHGVGGETATAALRAAGF 235


>gi|219666826|ref|YP_002457261.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
           DCB-2]
 gi|219537086|gb|ACL18825.1| formamidopyrimidine-DNA glycosylase [Desulfitobacterium hafniense
           DCB-2]
          Length = 281

 Score = 35.2 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           GIG  + QDI  +  I P+R++  L + E  ++ QA+
Sbjct: 171 GIGNGTLQDILFEAGIHPKRKIGTLEQWERDKLLQAV 207


>gi|313618758|gb|EFR90663.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL S4-378]
          Length = 273

 Score = 35.2 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G   + +IC +  + PER  + L + E+ +I
Sbjct: 170 GVGNIYADEICFEAKVHPERAANTLSDKEINRI 202


>gi|168490159|ref|ZP_02714358.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|168494821|ref|ZP_02718964.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|168494915|ref|ZP_02719058.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|168494968|ref|ZP_02719111.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|168494983|ref|ZP_02719126.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183571457|gb|EDT91985.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|183575124|gb|EDT95652.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183575158|gb|EDT95686.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183575216|gb|EDT95744.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
 gi|183575308|gb|EDT95836.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC3059-06]
          Length = 126

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 23  HGIGFKSSQDICNKLAIPPERRV--HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
           HG     ++    ++ +    RV   +L +  + +I +  +  YQ EG L + +  +IKR
Sbjct: 53  HGSNTSLAKTFLYQINVESTNRVECKEL-QGRIEKIMEE-QGFYQTEGGLEQWIP-DIKR 109

Query: 81  LMDLGCYRGL 90
            +D+  YRG+
Sbjct: 110 YVDVRTYRGM 119


>gi|326405833|gb|ADZ62904.1| NAD/FAD-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
           CV56]
          Length = 425

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           I  K  I P      L E ++ +I  ++ +++Q+
Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348


>gi|322418248|ref|YP_004197471.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
 gi|320124635|gb|ADW12195.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
          Length = 261

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I GIG   + +I     I P+    +L    V  +  AI
Sbjct: 160 IGGIGNAYADEILWAARISPKSPAGKLPPEAVKALADAI 198


>gi|256425446|ref|YP_003126099.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM
           2588]
 gi|256040354|gb|ACU63898.1| DNA-formamidopyrimidine glycosylase [Chitinophaga pinensis DSM
           2588]
          Length = 259

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-----EQDYQVEGDLRRTVAM 76
           I GIG   + +I  +  I P    +++  ++V  +  AI     E + Q+  +    +A 
Sbjct: 158 IRGIGNAYADEILWEAGISPFSIANKIPATKVKALHAAIHNVLKEAEKQIRKEHPDIIAG 217

Query: 77  NIKRLMDL 84
            I+  M +
Sbjct: 218 EIRDFMKI 225


>gi|15672240|ref|NP_266414.1| hypothetical protein L56208 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723118|gb|AAK04356.1|AE006263_3 hypothetical protein L56208 [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 423

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           I  K  I P      L E ++ +I  ++ +++Q+
Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348


>gi|320102895|ref|YP_004178486.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644]
 gi|319750177|gb|ADV61937.1| formamidopyrimidine-DNA glycosylase [Isosphaera pallida ATCC 43644]
          Length = 288

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           GIG   + +IC    I PE   + L   +V ++  AI 
Sbjct: 171 GIGNIYADEICFAARIHPEIPANTLSARQVDRLHAAIS 208


>gi|317124736|ref|YP_004098848.1| hypothetical protein Intca_1608 [Intrasporangium calvum DSM
          43043]
 gi|315588824|gb|ADU48121.1| hypothetical protein Intca_1608 [Intrasporangium calvum DSM
          43043]
          Length = 105

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 19 LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
          L  + G+G   ++ I  ++ I   RRV  L  ++V  +
Sbjct: 61 LESLPGVGRVRAKAIMAEVGIAESRRVRGLGANQVAAL 98


>gi|281490746|ref|YP_003352726.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
           KF147]
 gi|281374515|gb|ADA64036.1| NAD(FAD)-utilizing dehydrogenase [Lactococcus lactis subsp. lactis
           KF147]
          Length = 425

 Score = 35.2 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           I  K  I P      L E ++ +I  ++ +++Q+
Sbjct: 316 ILEKAGIDPSLSAKTLSEQQIDKI-ASLFKNWQI 348


>gi|290559894|gb|EFD93216.1| protein of unknown function DUF814 [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 587

 Score = 35.2 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 5/36 (13%), Positives = 20/36 (55%)

Query: 23  HGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
             IG   ++++C +  +   ++  +L + E+ ++++
Sbjct: 177 FAIGGNYAEEVCFRAEVDKTKKSSELNKEEIEKLKE 212


>gi|169824351|ref|YP_001691962.1| fibronectin-binding protein [Finegoldia magna ATCC 29328]
 gi|167831156|dbj|BAG08072.1| fibronectin-binding protein [Finegoldia magna ATCC 29328]
          Length = 578

 Score = 35.2 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75
           G     S++IC +  +    RV  L + E  +       IR+ I   +Y+    +     
Sbjct: 199 GFSPTISREICLRADLDYNIRVEDLNDDEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258

Query: 76  MNIKRLMDLGCY 87
           +    ++ L  Y
Sbjct: 259 LKDFHVIKLEKY 270


>gi|209523386|ref|ZP_03271941.1| SMC domain protein [Arthrospira maxima CS-328]
 gi|209496128|gb|EDZ96428.1| SMC domain protein [Arthrospira maxima CS-328]
          Length = 403

 Score = 35.2 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 6/78 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I+G+G  S   + + L I   R + +L + +  +I   I+     + +L+  + ++I   
Sbjct: 31  INGVGKSS---VLDALRIAFSRILPELTDCQERRINFNIDDIMIGKTELKVEINVDISG- 86

Query: 82  MDLGC--YRGLRHRRGLP 97
           +   C   RG RH + L 
Sbjct: 87  IPFRCKVSRGKRHEQELK 104


>gi|89893499|ref|YP_516986.1| hypothetical protein DSY0753 [Desulfitobacterium hafniense Y51]
 gi|89332947|dbj|BAE82542.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 349

 Score = 35.2 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           GIG  + QDI  +  I P+R++  L + E  ++ QA+ +
Sbjct: 239 GIGNGTLQDILFEAGIHPKRKIGTLEQWERDKLLQAVMK 277


>gi|323702034|ref|ZP_08113702.1| Fibronectin-binding A domain protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532916|gb|EGB22787.1| Fibronectin-binding A domain protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 597

 Score = 35.2 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 22/38 (57%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           L  I GIG ++ +++  +  +PP+  V+   + E+ ++
Sbjct: 200 LQKIAGIGPQTCRELVVRAGLPPDYLVNHCGDYELTKL 237


>gi|302380926|ref|ZP_07269388.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311304|gb|EFK93323.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3]
          Length = 407

 Score = 35.2 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 3   RIAGVNIPRAKRVV-----RALCYIH-------G-IGFKSSQDICNKLAIPPERRVHQLV 49
           RI  V++   K         +L Y         G I     +++ N+  I  +  V +L 
Sbjct: 259 RIDTVDLDENKLYEHLIYIISLNYYKKINELLVGLINDNLIEEVLNQTGINYDINVCELS 318

Query: 50  ESEVIQIRQAIEQ 62
           + E+ ++   ++ 
Sbjct: 319 KEEIYKLAHTLKN 331


>gi|89100390|ref|ZP_01173254.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
 gi|89084909|gb|EAR64046.1| formamidopyrimidine-DNA glycosylase [Bacillus sp. NRRL B-14911]
          Length = 275

 Score = 35.2 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 3   RIAGVNIPRAKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           R+AG N    + V  AL     + G+G     +   +  I PER    L + E+ ++ + 
Sbjct: 151 RLAGTN----RAVKTALLDQKAVVGLGNIYVDEALFRAGIHPERLASSLSDDEIGRLHKE 206

Query: 60  I 60
           I
Sbjct: 207 I 207


>gi|295397476|ref|ZP_06807559.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
           11563]
 gi|294974276|gb|EFG50020.1| DNA-formamidopyrimidine glycosylase [Aerococcus viridans ATCC
           11563]
          Length = 285

 Score = 35.2 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68
           I GIG   + +I     I PE+    L + E+  I    R+ +    +V G
Sbjct: 168 IAGIGNIYADEILFAAKIHPEQSARSLYDEEIQAIITESRRIMASAIEVGG 218


>gi|284991552|ref|YP_003410106.1| hypothetical protein Gobs_3128 [Geodermatophilus obscurus DSM
           43160]
 gi|284064797|gb|ADB75735.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
           43160]
          Length = 116

 Score = 35.2 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           RV   L  + G+G   +  I  +L I P RRV  L  ++   +   
Sbjct: 56  RVSAVLESLPGVGKARAAKIMERLEISPTRRVRGLGANQRRALESE 101


>gi|126640390|ref|YP_001083374.1| hypothetical protein A1S_0304 [Acinetobacter baumannii ATCC 17978]
 gi|126386274|gb|ABO10772.1| hypothetical protein A1S_0304 [Acinetobacter baumannii ATCC 17978]
          Length = 992

 Score = 35.2 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 16/92 (17%)

Query: 23  HGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD----LRRTVAMNI 78
            GIG  S+  +        ++++     S        +E    + G         +  N+
Sbjct: 512 FGIGLHSAFLLLENTLEDTDKKIKFKTCSYFNNENLEVEMFSPLGGKQGFCFINKIQDNL 571

Query: 79  KR------LMDLG-----CYRGLRHRRGLPVR 99
           K       L+ +       YRGL +R+  PVR
Sbjct: 572 KHEYGAEFLIKIKRKFILSYRGL-YRKKSPVR 602


>gi|257068645|ref|YP_003154900.1| hypothetical protein Bfae_14790 [Brachybacterium faecium DSM 4810]
 gi|256559463|gb|ACU85310.1| hypothetical protein Bfae_14790 [Brachybacterium faecium DSM 4810]
          Length = 108

 Score = 35.2 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
            I    RV   L  + G+G   +Q I  ++ I P R++  L   +  ++  
Sbjct: 54  EIVGRLRVSALLEALPGVGKVKAQQIMEEIGISPSRKIRGLGSHQAEKLVA 104


>gi|326632100|gb|ADZ99052.1| ribosomal protein S13 [Physarum polycephalum]
          Length = 186

 Score = 35.2 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE--QDYQVEGDLRRTVAMNIK 79
            +GIG   +  + + L   P +        EVI     ++  +    +  +R  V  +++
Sbjct: 22  FYGIGKIKATRLNSFLLNHPVQTRFTFNFKEVIYPSTGLDIWKKIPKDMKIRLCVENHLR 81

Query: 80  RLMDLGCYRGLRHRRGLPVRGQRTHTNA 107
             +   CY+  R  + LP +GQRT  NA
Sbjct: 82  NKILTYCYQMYRLFQNLPTKGQRTKANA 109


>gi|239947088|ref|ZP_04698841.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239921364|gb|EER21388.1| formamidopyrimidine-DNA glycosylase [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 273

 Score = 35.2 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 21/41 (51%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I G+G   + +  +   I P++  + L + E+  + ++I +
Sbjct: 167 IVGVGNIYASESLHLARIHPDKLGNDLNDDEIESLIKSIRE 207


>gi|116511080|ref|YP_808296.1| flavoprotein [Lactococcus lactis subsp. cremoris SK11]
 gi|116106734|gb|ABJ71874.1| Predicted flavoprotein [Lactococcus lactis subsp. cremoris SK11]
          Length = 424

 Score = 35.2 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 7/42 (16%)

Query: 33  ICNKLAIPPERRVHQLVESEVIQIRQ-------AIEQDYQVE 67
           I  K  I P      L E ++ ++ Q        I +   +E
Sbjct: 316 ILEKAGINPALPAKSLSEQQIEKLVQLFKNWQIIINKTLPIE 357


>gi|284028154|ref|YP_003378085.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836]
 gi|283807447|gb|ADB29286.1| DNA-formamidopyrimidine glycosylase [Kribbella flavida DSM 17836]
          Length = 287

 Score = 35.2 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   + P +    L + E+  +  A+++  +   D  + +A      
Sbjct: 172 IAGIGNAYSDEILHVARMSPFKPASNLSDDELHVLYTAMQETLRDAVDRSKGLAA----- 226

Query: 82  MDLGCYRGLRHRRGLPVRG 100
            DL   +    + GL V G
Sbjct: 227 QDLKSEK----KSGLRVHG 241


>gi|215402744|ref|ZP_03414925.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           02_1987]
          Length = 160

 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 45  IAGIGNAHSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102

Query: 82  MDLGCYRGLR-HRR-GLPV 98
                  GLR H R GLP 
Sbjct: 103 KGEKR-SGLRVHARTGLPC 120


>gi|18404050|ref|NP_564608.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase
           [Arabidopsis thaliana]
 gi|5903053|gb|AAD55612.1|AC008016_22 Identical to gb|AB010690 mutM homologue-1 (formamidopyrimidine-DNA
           glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
           comes from this gene
 gi|3550982|dbj|BAA32702.1| AtMMH-1 [Arabidopsis thaliana]
 gi|195947437|gb|ACG58696.1| At1g52500 [Arabidopsis thaliana]
 gi|332194693|gb|AEE32814.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
          Length = 390

 Score = 34.9 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69
           YI GIG   + ++  +  I P +    L + +       I++ IE+  +V+ D
Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDAD 232


>gi|2204269|emb|CAA97648.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 1162

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 26  GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI---EQDYQVEGDLRRTVAMNIKRLM 82
           G   ++ +  KL      +V      EV +I + +   E +++V  D    +   +K+L 
Sbjct: 569 GNHVAKGLM-KLGTNQSDKVDDYTPEEVDKIERELSERENNFRVASDTVHEMEEELKKLR 627

Query: 83  D 83
           D
Sbjct: 628 D 628


>gi|193214453|ref|YP_001995652.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Chloroherpeton thalassium ATCC 35110]
 gi|193087930|gb|ACF13205.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal
           allergen [Chloroherpeton thalassium ATCC 35110]
          Length = 682

 Score = 34.9 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 1/18 (5%)

Query: 17  RALCYIHGIG-FKSSQDI 33
            AL YI+GIG  + + DI
Sbjct: 222 IALTYIYGIGDRRKAYDI 239


>gi|315426179|dbj|BAJ47823.1| DNA topoisomerase VI subunit B [Candidatus Caldiarchaeum
           subterraneum]
          Length = 520

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           IG K+++++     + PE    +L   +V  +  A
Sbjct: 272 IGPKTAKEVLELAGLKPETSPRKLSHEQVTALVDA 306


>gi|145592125|ref|YP_001154127.1| DNA topoisomerase VI subunit B [Pyrobaculum arsenaticum DSM 13514]
 gi|145283893|gb|ABP51475.1| DNA topoisomerase VI, B subunit [Pyrobaculum arsenaticum DSM 13514]
          Length = 528

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           +G  +++         P  +   L   E++++ + ++Q
Sbjct: 260 VGEGTAKAFLEWAGFNPNAKATALTPEELVRLVEKMKQ 297


>gi|300781662|ref|ZP_07091516.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC
           33030]
 gi|300533369|gb|EFK54430.1| dimethyladenosine transferase [Corynebacterium genitalium ATCC
           33030]
          Length = 302

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           R K +   L  ++G G   +++      I P  R  +L   + +++ +  +
Sbjct: 253 RRKTLRACLTGVYGSGPA-AEEALRAAGIDPGLRGEKLSVEDFVRLAEVTD 302


>gi|3820620|gb|AAC97952.1| putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis
           thaliana]
          Length = 390

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69
           YI GIG   + ++  +  I P +    L + +       I++ IE+  +V+ D
Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDAD 232


>gi|30695252|ref|NP_849798.1| ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1); DNA N-glycosylase
           [Arabidopsis thaliana]
 gi|5903054|gb|AAD55613.1|AC008016_23 Identical to gb|AB010690 mutM homologue-2 (formamidopyrimidine-DNA
           glycosylase 1) from Arabidopsis thaliana. EST gb|Z18192
           comes from this gene
 gi|3550983|dbj|BAA32703.1| AtMMH-2 [Arabidopsis thaliana]
 gi|3820622|gb|AAC97953.1| putative formamidopyrimidine-DNA glycosylase 2 [Arabidopsis
           thaliana]
 gi|332194694|gb|AEE32815.1| formamidopyrimidine-DNA glycosylase [Arabidopsis thaliana]
          Length = 274

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAIEQDYQVEGD 69
           YI GIG   + ++  +  I P +    L + +       I++ I+   QV  D
Sbjct: 180 YISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIQHAVQVNAD 232


>gi|308463479|ref|XP_003094013.1| hypothetical protein CRE_16394 [Caenorhabditis remanei]
 gi|308248676|gb|EFO92628.1| hypothetical protein CRE_16394 [Caenorhabditis remanei]
          Length = 516

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%), Gaps = 3/35 (8%)

Query: 34 CNKLAIPPERRVHQLVESEVIQIR---QAIEQDYQ 65
          C K  +   +R  +L + +  +I    + ++  +Q
Sbjct: 44 CRKADVDVNKRAGELSKEDFDKIVTICKIMQNPFQ 78


>gi|121533715|ref|ZP_01665542.1| protein of unknown function DUF814 [Thermosinus carboxydivorans
           Nor1]
 gi|121307706|gb|EAX48621.1| protein of unknown function DUF814 [Thermosinus carboxydivorans
           Nor1]
          Length = 478

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 23/39 (58%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           GIG  +++++  +  +P + ++ QL  ++   + +A++ 
Sbjct: 94  GIGPLTAKELVWRAGLPADIKIDQLDTADFASLAEAVQD 132


>gi|227115115|ref|ZP_03828771.1| formamidopyrimidine-DNA glycosylase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 269

 Score = 34.9 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 30/111 (27%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66
             K VV       G+G   + +      I P+R    L ES+   +   I+Q  Q+    
Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRTAGSLNESDAAILVGVIKQVLQLSIEQ 212

Query: 67  -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102
               LR  +  + K      +L  Y G   R G P R           GQR
Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTPIEIAKHGQR 259


>gi|294632524|ref|ZP_06711084.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
 gi|292835857|gb|EFF94206.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. e14]
          Length = 269

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 11/80 (13%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G   S +I +   + P +R   L + E+  +  A          LR T+   ++R 
Sbjct: 200 IAGVGNAYSDEILHAARMSPFKRTAALTDEEIAGLYAA----------LRTTLTEAVERS 249

Query: 82  MDLGCYR-GLRHRRGLPVRG 100
             +   R     + GL V G
Sbjct: 250 RGVAAGRLKAEKKSGLRVHG 269


>gi|29833831|ref|NP_828465.1| formamidopyrimidine-DNA glycosylase [Streptomyces avermitilis
           MA-4680]
 gi|29610955|dbj|BAC75000.1| putative formamidopyrimidine-DNA glycosylase [Streptomyces
           avermitilis MA-4680]
          Length = 286

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 15/97 (15%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
             +R+  AL     I G+G   S +I +   + P +    L   E+ Q+  A        
Sbjct: 157 ERRRIKGALRDQSLIAGVGNAYSDEILHAAKMSPFKLTSALTAEEIRQLYAA-------- 208

Query: 68  GDLRRTVAMNIKRLMDLGCYR-GLRHRRGLPVRGQRT 103
             LR T+   ++R   L   R     + GL V G RT
Sbjct: 209 --LRTTLTEAVERSRGLAAGRLKAEKKTGLRVHG-RT 242


>gi|218133746|ref|ZP_03462550.1| hypothetical protein BACPEC_01615 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991121|gb|EEC57127.1| hypothetical protein BACPEC_01615 [Bacteroides pectinophilus ATCC
           43243]
          Length = 582

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 9   IPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           +  +K +   L    GI    +++IC +  I  ++    L   E  ++
Sbjct: 189 LKSSKALYTGLT---GISPVIAEEICYRAGIESDQPAGTLSSDEQHRL 233


>gi|329921345|ref|ZP_08277783.1| helicase, RecD/TraA family [Lactobacillus iners SPIN 1401G]
 gi|328934637|gb|EGG31141.1| helicase, RecD/TraA family [Lactobacillus iners SPIN 1401G]
          Length = 780

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    ++   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|288932692|ref|YP_003436752.1| Fibronectin-binding A domain protein [Ferroglobus placidus DSM
           10642]
 gi|288894940|gb|ADC66477.1| Fibronectin-binding A domain protein [Ferroglobus placidus DSM
           10642]
          Length = 646

 Score = 34.9 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 24/42 (57%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G+G   +++I  +  +  ++   +L E EV +I + +++ ++
Sbjct: 177 GLGGLYAEEILERAGVNKKKPGKELEEDEVRRIFEEMKKIFE 218


>gi|239502346|ref|ZP_04661656.1| putative oxydoreductase protein, zinc-containing (quinone
           oxidoreductase, NADPH dependent) [Acinetobacter
           baumannii AB900]
          Length = 332

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 9/55 (16%)

Query: 8   NIPRAKRVVRALCYIHG----IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           +I R K+   AL  IHG    IG  ++  IC+ L I     V    E +V  +  
Sbjct: 139 DIGRLKKDEIAL--IHGGASGIG-TTALAICHALGIKTFATVG--SEDKVEALSD 188


>gi|330431949|gb|AEC17008.1| formamidopyrimidine-DNA glycosylase [Gallibacterium anatis UMN179]
          Length = 285

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           G+G   + ++     I P   V  L + +  ++   I+Q  Q
Sbjct: 166 GVGNIYANEVLFNCGIYPNAPVSSLSKEDCERLVANIKQTLQ 207


>gi|312873951|ref|ZP_07733987.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2052A-d]
 gi|325911498|ref|ZP_08173909.1| helicase, RecD/TraA family [Lactobacillus iners UPII 143-D]
 gi|311090500|gb|EFQ48908.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2052A-d]
 gi|325476698|gb|EGC79853.1| helicase, RecD/TraA family [Lactobacillus iners UPII 143-D]
          Length = 780

 Score = 34.9 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    ++   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|302407804|ref|XP_003001737.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
           VaMs.102]
 gi|261359458|gb|EEY21886.1| formamidopyrimidine-DNA glycosylase [Verticillium albo-atrum
           VaMs.102]
          Length = 390

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
            +I GIG   + ++  +  + PE+      + E+  I
Sbjct: 166 THISGIGNWVADEVLYQANVHPEQYCDDFSDREIKAI 202


>gi|295703014|ref|YP_003596089.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or
           apyrimidinic site) lyase nei) [Bacillus megaterium DSM
           319]
 gi|294800673|gb|ADF37739.1| endonuclease VIII (dna glycosylase/ap lyase nei) (dna-(apurinic or
           apyrimidinic site) lyase nei) [Bacillus megaterium DSM
           319]
          Length = 272

 Score = 34.9 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA----IEQDYQVEG 68
           I GIG     +I     I P  R     E ++ +  +A    ++Q Y+  G
Sbjct: 164 IAGIGNYLRSEILFVAGINPASRPVDCTEEQLKKAAEATISLVKQSYETGG 214


>gi|225568125|ref|ZP_03777150.1| hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM
           15053]
 gi|225163078|gb|EEG75697.1| hypothetical protein CLOHYLEM_04198 [Clostridium hylemonae DSM
           15053]
          Length = 203

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRV-HQLVESEVIQI 56
           Y  G G    ++IC K  I P+  V   L   ++ +I
Sbjct: 154 YAFGGGRTVIKEICGKYGIDPDTAVISALTAEQLEEI 190


>gi|84496652|ref|ZP_00995506.1| hypothetical protein JNB_03995 [Janibacter sp. HTCC2649]
 gi|84383420|gb|EAP99301.1| hypothetical protein JNB_03995 [Janibacter sp. HTCC2649]
          Length = 105

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 25/55 (45%)

Query: 8   NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           ++    RV   L  + G+G   ++ +   + I   RRV  L ++++  +    ++
Sbjct: 50  DVIGKMRVSALLESMPGVGRVKAKALMEDIGISESRRVRGLGQNQISALLTRFDK 104


>gi|18977764|ref|NP_579121.1| hypothetical protein PF1392 [Pyrococcus furiosus DSM 3638]
 gi|18893505|gb|AAL81516.1| hypothetical protein PF1392 [Pyrococcus furiosus DSM 3638]
          Length = 649

 Score = 34.9 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 15  VVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           +VRAL     IG   S++   +  I  +R+V +L E E+
Sbjct: 175 IVRALAKNFSIGGLYSEETLLRAKIDKDRKVDELSEEEL 213


>gi|258508303|ref|YP_003171054.1| helicase [Lactobacillus rhamnosus GG]
 gi|257148230|emb|CAR87203.1| Helicase, RecD/TraA family protein [Lactobacillus rhamnosus GG]
 gi|259649619|dbj|BAI41781.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus GG]
          Length = 821

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 7   VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           V+ P  K  +    +     GIG K+++ I +KL +    R+  L + E ++
Sbjct: 81  VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130


>gi|323359501|ref|YP_004225897.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
           StLB037]
 gi|323275872|dbj|BAJ76017.1| formamidopyrimidine-DNA glycosylase [Microbacterium testaceum
           StLB037]
          Length = 274

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   S +I     + P      L E +V ++
Sbjct: 170 GIGNAYSDEILYAARLSPTAHASSLSEDDVTRL 202


>gi|312871405|ref|ZP_07731500.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 3008A-a]
 gi|311093058|gb|EFQ51407.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 3008A-a]
          Length = 780

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    ++   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|312872367|ref|ZP_07732437.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2062A-h1]
 gi|311092190|gb|EFQ50564.1| helicase, RecD/TraA family [Lactobacillus iners LEAF 2062A-h1]
          Length = 780

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    ++   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|89100042|ref|ZP_01172912.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911]
 gi|89085276|gb|EAR64407.1| hypothetical protein B14911_17735 [Bacillus sp. NRRL B-14911]
          Length = 275

 Score = 34.9 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           I GIG   S +IC++  + P R++ +L E E  ++
Sbjct: 170 IAGIGNCYSDEICHQAGLLPMRKIEELSEMEKSRL 204


>gi|320163662|gb|EFW40561.1| AtMMH-1 [Capsaspora owczarzaki ATCC 30864]
          Length = 985

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 18/38 (47%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           G+G   + ++  +  I PE+  + L   ++  +   I+
Sbjct: 248 GVGNWVADEVLYQAGIHPEQYTNTLSGEQLAALLDKIQ 285


>gi|255994850|ref|ZP_05427985.1| DNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993563|gb|EEU03652.1| DNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 647

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIR---QAIEQDYQVE---GDLRRTVAMN 77
           GIG+ ++  I   L      ++ +L   ++  I    + + + +  E    +++R +   
Sbjct: 496 GIGYTNAGKIAAALGFDV-MKLFELTPEKINNIEGLGEVLTESFMAELSDENMKRRMREI 554

Query: 78  IKR 80
           IKR
Sbjct: 555 IKR 557


>gi|171185843|ref|YP_001794762.1| DNA topoisomerase VI subunit B [Thermoproteus neutrophilus V24Sta]
 gi|170935055|gb|ACB40316.1| DNA topoisomerase VI, B subunit [Thermoproteus neutrophilus V24Sta]
          Length = 530

 Score = 34.9 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 5/38 (13%), Positives = 17/38 (44%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           +G  +++         P  +   L   E++++ + ++Q
Sbjct: 263 VGEGTAKTFLEWAGFNPNAKATALTPEELVRLVEKMKQ 300


>gi|239623743|ref|ZP_04666774.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521774|gb|EEQ61640.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 424

 Score = 34.9 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 17/41 (41%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGD 69
            S  +   L + P +R   + E E+  I +   +   +E +
Sbjct: 154 MSSGVLKALNVDPNKRGDDMTEDELRTIVEVGHEKGVIESE 194


>gi|86741882|ref|YP_482282.1| putative integration host factor MihF [Frankia sp. CcI3]
 gi|86568744|gb|ABD12553.1| putative integration host factor MihF [Frankia sp. CcI3]
          Length = 105

 Score = 34.5 bits (79), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +Q I  +L I P RR+  L   +   + + 
Sbjct: 61  LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101


>gi|258539516|ref|YP_003174015.1| helicase, RecD/TraA family protein [Lactobacillus rhamnosus Lc 705]
 gi|257151192|emb|CAR90164.1| Helicase, RecD/TraA family protein [Lactobacillus rhamnosus Lc 705]
          Length = 821

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 7   VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           V+ P  K  +    +     GIG K+++ I +KL +    R+  L + E ++
Sbjct: 81  VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130


>gi|229552099|ref|ZP_04440824.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus
           LMS2-1]
 gi|229314532|gb|EEN80505.1| exodeoxyribonuclease V alpha subunit [Lactobacillus rhamnosus
           LMS2-1]
          Length = 822

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 7   VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           V+ P  K  +    +     GIG K+++ I +KL +    R+  L + E ++
Sbjct: 82  VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 131


>gi|187934958|ref|YP_001887219.1| radical SAM [Clostridium botulinum B str. Eklund 17B]
 gi|187723111|gb|ACD24332.1| SAM domain protein [Clostridium botulinum B str. Eklund 17B]
          Length = 437

 Score = 34.5 bits (79), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 12/76 (15%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ-DYQV--EGDLRRTVA 75
           L  I GIG  S++ I         RRVH L   ++ ++R  +++  Y +  +G     ++
Sbjct: 334 LLRIPGIGVTSAKKIIKI------RRVHSLTFEDLKKLRVILKKSKYFITCDGKYYGNIS 387

Query: 76  MN---IKRLMDLGCYR 88
            +   IK  +    Y+
Sbjct: 388 FDDLIIKNKLLEDSYK 403


>gi|328554525|gb|AEB25017.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
           glycosylase [Bacillus amyloliquefaciens TA208]
          Length = 276

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 12  AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
            + V  AL     + G+G     +   +  I PE + + L + ++ ++   I+   Q   
Sbjct: 156 NRAVKTALLDQKAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAI 215

Query: 69  DLRRT-VAMNIKRLMDLGCYRGLRH 92
           D   + V   I    ++G ++ LRH
Sbjct: 216 DAGGSTVRSYINSQGEIGMFQ-LRH 239


>gi|317153157|ref|YP_004121205.1| helicase, RecD/TraA family [Desulfovibrio aespoeensis Aspo-2]
 gi|316943408|gb|ADU62459.1| helicase, RecD/TraA family [Desulfovibrio aespoeensis Aspo-2]
          Length = 736

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTVAMNI 78
            I G+G K++  +     +     V  L++ +  Q+     I ++   +     +    I
Sbjct: 94  SIKGVGEKTATRLVEAFGVA----VLDLLDDDPEQLLSIKGISKNKLTDIIDSWSRQREI 149

Query: 79  KRL 81
           K L
Sbjct: 150 KNL 152


>gi|317502015|ref|ZP_07960199.1| DNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316896695|gb|EFV18782.1| DNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 644

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 8/57 (14%)

Query: 3   RIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           RI       +P   R++ +L  I  IG  +++ IC  L   P +RV +  E E+  I
Sbjct: 473 RIENARKTTLP---RLIYSL-GIPNIGISNAKMICRALGEDP-KRVIRATEEELSAI 524


>gi|238063920|ref|ZP_04608629.1| hypothetical protein MCAG_04886 [Micromonospora sp. ATCC 39149]
 gi|237885731|gb|EEP74559.1| hypothetical protein MCAG_04886 [Micromonospora sp. ATCC 39149]
          Length = 105

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 6  GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
          G ++    +V   L  + GIG   +  I  KL I   RR+  L E +   +
Sbjct: 48 GDDVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98


>gi|227510189|ref|ZP_03940238.1| Holliday junction DNA helicase RuvA [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227513117|ref|ZP_03943166.1| Holliday junction DNA helicase RuvA [Lactobacillus buchneri ATCC
           11577]
 gi|227083692|gb|EEI19004.1| Holliday junction DNA helicase RuvA [Lactobacillus buchneri ATCC
           11577]
 gi|227190394|gb|EEI70461.1| Holliday junction DNA helicase RuvA [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 198

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 16/61 (26%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE-----------SEVIQIRQAI 60
            K V   L    G+G K++Q I     +  + +V  L +            +  ++R AI
Sbjct: 103 NKDVKF-LTKFPGVGKKTAQQII----LDLQGKVGDLSQIVQARSGQSASEQSDELRDAI 157

Query: 61  E 61
            
Sbjct: 158 S 158


>gi|116492457|ref|YP_804192.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Pediococcus pentosaceus ATCC 25745]
 gi|122266079|sp|Q03GC2|FPG_PEDPA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|116102607|gb|ABJ67750.1| DNA-(apurinic or apyrimidinic site) lyase [Pediococcus pentosaceus
           ATCC 25745]
          Length = 275

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLR-RTVAMNIKR 80
           I G+G   + ++     I P++  + L + E+  +R++I ++ Q+  + +  TV   +  
Sbjct: 168 IAGLGNIYADEVLWLSKIHPQQISNTLTDEEIAILRESIFEELQLAIEAKGTTVFSYLNA 227

Query: 81  LMDLGCYRG---LRHRRGLPVRGQR 102
               G ++    + HR+GLP   QR
Sbjct: 228 DGHAGSFQNQLHVYHRQGLPC--QR 250


>gi|302538173|ref|ZP_07290515.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
 gi|302447068|gb|EFL18884.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. C]
          Length = 286

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 27/88 (30%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------IQIRQAIEQDYQV-EGDLRR 72
           I GIG   S +I +   + P +      E +V          +R+A+E+ + +   DL+ 
Sbjct: 171 IAGIGNAYSDEILHAAKVSPFKLAASFDEEQVTHLYGAVRDTLREAVERAHGLAAQDLKA 230

Query: 73  TVAMNIKRLMDLGCYRGLRHRRGLPVRG 100
                                 GL V G
Sbjct: 231 EKKS------------------GLRVHG 240


>gi|296141029|ref|YP_003648272.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM
           20162]
 gi|296029163|gb|ADG79933.1| DNA-formamidopyrimidine glycosylase [Tsukamurella paurometabola DSM
           20162]
          Length = 290

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   + P      L E++   +  A+    +++  + R+V  ++  L
Sbjct: 175 IAGIGNAYSDEILHTAKLSPFAGAKSLDEAQTDALYAAMHT--ELDDAVARSVGQHVATL 232

Query: 82  MDLGCYRGLRHRRGLPVRGQRT 103
                      R G+ V G RT
Sbjct: 233 KAEK-------RSGMKVHG-RT 246


>gi|126175889|ref|YP_001052038.1| hypothetical protein Sbal_3695 [Shewanella baltica OS155]
 gi|125999094|gb|ABN63169.1| conserved hypothetical protein [Shewanella baltica OS155]
          Length = 320

 Score = 34.5 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 14/67 (20%)

Query: 3  RIAGV--NIPRAKRVVRALCYIHGIGFKSSQDICNKLA-IPPERRVHQLVESEVIQIRQA 59
           IA V   +P  KR          IG +   +IC++L  +  +    +L ES++  + + 
Sbjct: 7  YIAAVQRELPENKRQE--------IGRELKANICDQLDALSEQ---GELTESQIADVLKQ 55

Query: 60 IEQDYQV 66
          +   Y+V
Sbjct: 56 MGHPYKV 62


>gi|254383482|ref|ZP_04998833.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1]
 gi|194342378|gb|EDX23344.1| formamidopyrimidine-DNA glycosylase [Streptomyces sp. Mg1]
          Length = 286

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEV--------IQIRQAIEQDYQV-EGDLRR 72
           I GIG   S +I ++  + P +      E +V          +R+A+ + + V  G L+ 
Sbjct: 171 IAGIGNAYSDEILHRAKVSPFKLAASFDEEQVTHLYGAVQDTLREAVARSHGVAAGRLKA 230

Query: 73  TVAMNIK 79
                ++
Sbjct: 231 EKKSAMR 237


>gi|308174602|ref|YP_003921307.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307607466|emb|CBI43837.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens DSM
           7]
 gi|328912931|gb|AEB64527.1| formamidopyrimidine-DNA glycosidase [Bacillus amyloliquefaciens
           LL3]
          Length = 278

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 5/85 (5%)

Query: 12  AKRVVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEG 68
            + V  AL     + G+G     +   +  I PE + + L + ++ ++   I+   Q   
Sbjct: 158 NRAVKTALLDQKAVVGLGNIYVDEALFRAGIHPETKANSLSDGQIKKLHTEIKDTLQEAI 217

Query: 69  DLRRT-VAMNIKRLMDLGCYRGLRH 92
           D   + V   I    ++G ++ LRH
Sbjct: 218 DAGGSTVRSYINSQGEIGMFQ-LRH 241


>gi|220929383|ref|YP_002506292.1| Fibronectin-binding A domain protein [Clostridium cellulolyticum
           H10]
 gi|219999711|gb|ACL76312.1| Fibronectin-binding A domain protein [Clostridium cellulolyticum
           H10]
          Length = 592

 Score = 34.5 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 8   NIPRAKRVV-RALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           NI  AK      L  + G    + +DIC    +P +  + +L +S+  +I+ A+ +
Sbjct: 185 NIKGAKHPEGLILNTVKGFSPYTCRDICASAGVPSKTPIGELNDSDKEKIKVALAK 240


>gi|325261872|ref|ZP_08128610.1| DNA ligase, NAD-dependent [Clostridium sp. D5]
 gi|324033326|gb|EGB94603.1| DNA ligase, NAD-dependent [Clostridium sp. D5]
          Length = 651

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 8/54 (14%)

Query: 6   GVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
              +P   ++V +L  I  IG  +++ IC  L   P++    L E+ V ++ + 
Sbjct: 486 NTTLP---KLVYSL-GIANIGLANAKMICRALGNDPQK----LTEATVEELSEI 531


>gi|111224605|ref|YP_715399.1| integration host factor-like protein [Frankia alni ACN14a]
 gi|111152137|emb|CAJ63865.1| putative integration host factor-like protein (partial); putative
           coiled-coil domain [Frankia alni ACN14a]
          Length = 112

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +Q I  +L I P RR+  L   +   + + 
Sbjct: 68  LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 108


>gi|83590674|ref|YP_430683.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Moorella thermoacetica ATCC 39073]
 gi|123524146|sp|Q2RHE9|FPG_MOOTA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|83573588|gb|ABC20140.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Moorella thermoacetica ATCC 39073]
          Length = 274

 Score = 34.5 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           GIG   + ++     I P R    L   EV ++R A++
Sbjct: 171 GIGNIYADEMLFAAGIDPRRPAASLNHEEVARLRGAMQ 208


>gi|78185409|ref|YP_377844.1| formamidopyrimidine-DNA glycosylase [Synechococcus sp. CC9902]
 gi|78169703|gb|ABB26800.1| Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Synechococcus sp. CC9902]
          Length = 278

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I G+G   + +      IPP     +L   ++I++R  +     +   +  T   + + L
Sbjct: 173 IAGVGNIYADESLFAAGIPPLSPSGKLTIEQLIRLRDELVNVLHISIGVGGTTFSDFRDL 232

Query: 82  MDL-GCYRG----LRHRRGLPVR 99
             + G Y G     R R G P R
Sbjct: 233 EGVNGNYGGQSWVYR-RSGQPCR 254


>gi|258650476|ref|YP_003199632.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita
           DSM 44233]
 gi|258553701|gb|ACV76643.1| DNA-(apurinic or apyrimidinic site) lyase [Nakamurella multipartita
           DSM 44233]
          Length = 294

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 14  RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70
           R+   L     I G+G   S +I +   + P     +L   E+ ++  A+     +   +
Sbjct: 168 RIKNVLTDQRVIAGVGNAYSDEILHTARLSPFATAAKLSPDELDRLYDALAT--VLTDAV 225

Query: 71  RRTVAMNIKRLMDLGCYRGLR-HRR-GLPV 98
            R+V     RL       GLR H R GLP 
Sbjct: 226 LRSVGGQAARLKGEKRT-GLRVHARTGLPC 254


>gi|227524332|ref|ZP_03954381.1| Holliday junction DNA helicase RuvA [Lactobacillus hilgardii ATCC
           8290]
 gi|227088563|gb|EEI23875.1| Holliday junction DNA helicase RuvA [Lactobacillus hilgardii ATCC
           8290]
          Length = 198

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 16/61 (26%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVE-----------SEVIQIRQAI 60
            K V   L    G+G K++Q I     +  + +V  L +            +  ++R AI
Sbjct: 103 NKDVKF-LTKFPGVGKKTAQQII----LDLQGKVGDLSQIVQARSGQSASEQSDELRDAI 157

Query: 61  E 61
            
Sbjct: 158 S 158


>gi|199598164|ref|ZP_03211586.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase
           superfamily I member [Lactobacillus rhamnosus HN001]
 gi|199590925|gb|EDY99009.1| ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase
           superfamily I member [Lactobacillus rhamnosus HN001]
          Length = 821

 Score = 34.5 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 7   VNIPRAKRVVR---ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
           V+ P  K  +    +     GIG K+++ I +KL +    R+  L + E ++
Sbjct: 81  VDRPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIDRI--LDDPESLK 130


>gi|313623617|gb|EFR93781.1| formamidopyrimidine-DNA glycosylase [Listeria innocua FSL J1-023]
          Length = 273

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G   + +IC K  + PER  + L + E+ +I
Sbjct: 170 GVGNIYADEICFKAKVRPERAANSLSDKEINRI 202


>gi|83644837|ref|YP_433272.1| formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
 gi|83632880|gb|ABC28847.1| Formamidopyrimidine-DNA glycosylase [Hahella chejuensis KCTC 2396]
          Length = 302

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 11/64 (17%)

Query: 4   IAGVNIP--------RAKRVVRALC--YIH-GIGFKSSQDICNKLAIPPERRVHQLVESE 52
           I   ++P            + RAL   +I  G+G   S +I +   + P  +  +L   E
Sbjct: 136 ILEADLPAFQQALTRNNHTLKRALTDPHIFSGVGNAYSDEILHAARLSPIAQTQKLNAEE 195

Query: 53  VIQI 56
           + ++
Sbjct: 196 IERL 199


>gi|220931332|ref|YP_002508240.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
 gi|219992642|gb|ACL69245.1| formamidopyrimidine-DNA glycosylase [Halothermothrix orenii H 168]
          Length = 274

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           I G+G   + +   +  I PER+   L +SE+ ++  AI +  ++ 
Sbjct: 169 IAGLGNIYADEALFEAGISPERKADSLDDSEIERLYHAIRKVLKMG 214


>gi|34581344|ref|ZP_00142824.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246]
 gi|28262729|gb|EAA26233.1| formamidopyrimidine-DNA glycosidase [Rickettsia sibirica 246]
          Length = 273

 Score = 34.5 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I GIG   + +  +   I P++  + L + E+  + +AI  
Sbjct: 167 IVGIGNIYASESLHLARIHPDKSGNDLRDDEIENLIKAIRD 207


>gi|320528368|ref|ZP_08029530.1| helicase, RecD/TraA family [Solobacterium moorei F0204]
 gi|320131282|gb|EFW23850.1| helicase, RecD/TraA family [Solobacterium moorei F0204]
          Length = 730

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 23/69 (33%)

Query: 3   RIAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLA------IPPER----RVHQLVESE 52
            ++GVN P             GIG K+++ + + L       I  +     ++  L E +
Sbjct: 89  YLSGVNFP-------------GIGKKTAERVVDALGEDCLTLIREDNTLLEKIGDLSERQ 135

Query: 53  VIQIRQAIE 61
           +  I + ++
Sbjct: 136 INAIIEGLQ 144


>gi|309389717|gb|ADO77597.1| formamidopyrimidine-DNA glycosylase [Halanaerobium praevalens DSM
           2228]
          Length = 276

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68
           I GIG   + +I  + AI P+R   QL ESE   I    R+ +++     G
Sbjct: 171 IAGIGNIYADEILFRAAILPDRTADQLSESEKEAIYYNMREILQKGIIYGG 221


>gi|284931593|gb|ADC31531.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str.
           F]
          Length = 274

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           GIG   + +I     I P ++ ++L + +  +I +
Sbjct: 171 GIGNIYADEILFLSKINPAKKANELTDQQFKEISK 205


>gi|254556430|ref|YP_003062847.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
 gi|254045357|gb|ACT62150.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum JDM1]
          Length = 274

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            I GIG   + +      I P R  + L   E+  +RQ I
Sbjct: 167 KIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNI 206


>gi|91215880|ref|ZP_01252849.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC
           700755]
 gi|91185857|gb|EAS72231.1| formamidopyrimidine-DNA glycosylase [Psychroflexus torquis ATCC
           700755]
          Length = 260

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 25/43 (58%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV 66
           G+G   + +I  +  I P ++V ++ ++++  +  A+++  +V
Sbjct: 166 GVGNWMADEILYQSKIHPTKKVIEMTDTDIKSVFDAMKKVIEV 208


>gi|28378223|ref|NP_785115.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
 gi|300767154|ref|ZP_07077066.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180374|ref|YP_003924502.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|38257325|sp|Q88WV4|FPG_LACPL RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|28271058|emb|CAD63963.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum WCFS1]
 gi|300494973|gb|EFK30129.1| DNA-(apurinic or apyrimidinic site) lyase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308045865|gb|ADN98408.1| formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 274

 Score = 34.5 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            I GIG   + +      I P R  + L   E+  +RQ I
Sbjct: 167 KIAGIGNIYADETLWMSKIHPMRPANSLTTDEIATLRQNI 206


>gi|319955861|ref|YP_004167124.1| ribosomal protein l22 [Nitratifractor salsuginis DSM 16511]
 gi|319418265|gb|ADV45375.1| ribosomal protein L22 [Nitratifractor salsuginis DSM 16511]
          Length = 212

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           L  I GIG    Q   N   I     V  + + ++      +E+ Y  +GD R +VA   
Sbjct: 150 LTKIKGIGKAYQQK-LNDEGIHTYEDVANMTDEQI----AMMEEKYSFKGDFRESVADAK 204

Query: 79  K 79
            
Sbjct: 205 N 205


>gi|312138559|ref|YP_004005895.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S]
 gi|325676377|ref|ZP_08156056.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
 gi|311887898|emb|CBH47210.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi 103S]
 gi|325552938|gb|EGD22621.1| DNA-formamidopyrimidine glycosylase [Rhodococcus equi ATCC 33707]
          Length = 288

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLM 82
           GIG   S +I +   + P     +L   EV ++  A+    ++   + R+V     RL 
Sbjct: 175 GIGNAYSDEILHAARLSPFATTSKLAPDEVDRLYDAMRA--ELSDAVERSVGQEAARLK 231


>gi|302866823|ref|YP_003835460.1| hypothetical protein Micau_2340 [Micromonospora aurantiaca ATCC
          27029]
 gi|315503238|ref|YP_004082125.1| hypothetical protein ML5_2452 [Micromonospora sp. L5]
 gi|302569682|gb|ADL45884.1| hypothetical protein Micau_2340 [Micromonospora aurantiaca ATCC
          27029]
 gi|315409857|gb|ADU07974.1| hypothetical protein ML5_2452 [Micromonospora sp. L5]
          Length = 105

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 8  NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
          ++    +V   L  + GIG   +  I  KL I   RR+  L E +   +
Sbjct: 50 DVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98


>gi|251780130|ref|ZP_04823050.1| SAM domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084445|gb|EES50335.1| SAM domain protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 437

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI-EQDYQV--EGDLRRTVA 75
           L  I GIG  S++ I         RRVH+L   ++ ++R  +    Y +  +G     ++
Sbjct: 334 LLRIPGIGVTSAKKIIK------TRRVHRLTFEDLKKLRVILKRSKYFITCDGKYYGNIS 387

Query: 76  MN---IKRLMDLGCYR 88
            +   IK  +    Y+
Sbjct: 388 FDDLIIKNKLLEESYK 403


>gi|229587037|ref|YP_002845538.1| formamidopyrimidine-DNA glycosylase [Rickettsia africae ESF-5]
 gi|259647149|sp|C3PLF5|FPG_RICAE RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|228022087|gb|ACP53795.1| Formamidopyrimidine-DNA glycosidase [Rickettsia africae ESF-5]
          Length = 273

 Score = 34.5 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I GIG   + +  +   I P++  + L + E+  + +AI  
Sbjct: 167 IVGIGNIYASESLHLARIHPDKSGNDLRDDEIENLIKAIRD 207


>gi|303233651|ref|ZP_07320305.1| flavoprotein family protein [Finegoldia magna BVS033A4]
 gi|302495085|gb|EFL54837.1| flavoprotein family protein [Finegoldia magna BVS033A4]
          Length = 400

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            K +  A+  I  I  K    I     I P ++V+++ + E   +R+ I
Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327


>gi|145594403|ref|YP_001158700.1| hypothetical protein Strop_1860 [Salinispora tropica CNB-440]
 gi|159037476|ref|YP_001536729.1| hypothetical protein Sare_1853 [Salinispora arenicola CNS-205]
 gi|330466973|ref|YP_004404716.1| hypothetical protein VAB18032_15020 [Verrucosispora maris
          AB-18-032]
 gi|145303740|gb|ABP54322.1| hypothetical protein Strop_1860 [Salinispora tropica CNB-440]
 gi|157916311|gb|ABV97738.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
 gi|328809944|gb|AEB44116.1| hypothetical protein VAB18032_15020 [Verrucosispora maris
          AB-18-032]
          Length = 105

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 8  NIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
          ++    +V   L  + GIG   +  I  KL I   RR+  L E +   +
Sbjct: 50 DVVGKLKVSAVLQAMPGIGKIRATQIMEKLKIADSRRLRGLGEQQRKAL 98


>gi|327439558|dbj|BAK15923.1| ATP-dependent exoDNAse alpha subunit [Solibacillus silvestris
           StLB046]
          Length = 833

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 10/54 (18%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ----------LVESEVIQIRQAIEQDYQVE 67
           G+G K+++ I  KL +    ++ +          L   + + IRQ IE++  +E
Sbjct: 110 GVGRKTAETIVEKLGMDALTKILEDPSALDAVPRLSAEKKLHIRQTIEENLGLE 163


>gi|296129695|ref|YP_003636945.1| hypothetical protein Cfla_1849 [Cellulomonas flavigena DSM 20109]
 gi|296021510|gb|ADG74746.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
          Length = 103

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           L  + G+G   ++ I +++ I   RRV  L   +V  +  
Sbjct: 61  LESLPGVGKVKARAIMSEIGISETRRVRGLGPHQVKALVD 100


>gi|294660325|ref|NP_853016.2| formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str.
           R(low)]
 gi|284811982|gb|AAP56584.2| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930494|gb|ADC30433.1| Formamidopyrimidine-DNA glycosylase [Mycoplasma gallisepticum str.
           R(high)]
          Length = 274

 Score = 34.5 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           GIG   + +I     I P ++ ++L + +  +I +
Sbjct: 171 GIGNIYADEILFLSKINPAKKANELTDQQFKEISK 205


>gi|323490021|ref|ZP_08095242.1| exodeoxyribonuclease V-like protein [Planococcus donghaensis
           MPA1U2]
 gi|323396317|gb|EGA89142.1| exodeoxyribonuclease V-like protein [Planococcus donghaensis
           MPA1U2]
          Length = 805

 Score = 34.5 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQ----------LVESEVIQIRQAIEQDYQVEGDLR 71
            +GIG K+++ I  KL     +++ +          L + +   IR  ++ +  +E  + 
Sbjct: 106 FNGIGRKTAETIVKKLGKDAIKKILEDPDSLDKVPRLSDDKKDTIRATLQMNLGLERVMI 165

Query: 72  RTVAMNIKRLMDLGCYRGLR 91
           +         + +  Y+  R
Sbjct: 166 QLNDWGFGPQIGMRIYQAYR 185


>gi|309389010|gb|ADO76890.1| Fibronectin-binding A domain protein [Halanaerobium praevalens DSM
           2228]
          Length = 583

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
             GIG  S+++I  +  + P    + L + E  +I +++ + ++
Sbjct: 196 FRGIGPYSAREIVYRAQVDPAENYNSLSDLEKNKIAESMLKLFE 239


>gi|169824526|ref|YP_001692137.1| putative flavoprotein [Finegoldia magna ATCC 29328]
 gi|167831331|dbj|BAG08247.1| putative flavoprotein [Finegoldia magna ATCC 29328]
          Length = 400

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            K +  A+  I  I  K    I     I P ++V+++ + E   +R+ I
Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327


>gi|50119109|ref|YP_048276.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum
           SCRI1043]
 gi|81693474|sp|Q6DAV4|FPG_ERWCT RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|49609635|emb|CAG73068.1| formamidopyrimidine-DNA glycosylase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 269

 Score = 34.5 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 30/111 (27%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQV---- 66
             K VV       G+G   + +      I P+R    L E++   + + I+Q  Q+    
Sbjct: 160 DNKVVV-------GVGNIYASESLFAAGIHPDRAAGSLNENDADVLVRVIKQVLQLSIEQ 212

Query: 67  -EGDLRRTVAMNIK---RLMDLGCYRGLRHRRGLPVR-----------GQR 102
               LR  +  + K      +L  Y G   R G P R           GQR
Sbjct: 213 GGTTLRDFLQSDGKPGYFAQELRVY-G---RNGEPCRTCGTPIETAKHGQR 259


>gi|125973100|ref|YP_001037010.1| fibronectin-binding A-like protein [Clostridium thermocellum ATCC
           27405]
 gi|281417295|ref|ZP_06248315.1| Fibronectin-binding A domain protein [Clostridium thermocellum
           JW20]
 gi|125713325|gb|ABN51817.1| Fibronectin-binding A-like protein [Clostridium thermocellum ATCC
           27405]
 gi|281408697|gb|EFB38955.1| Fibronectin-binding A domain protein [Clostridium thermocellum
           JW20]
 gi|316940679|gb|ADU74713.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM
           1313]
          Length = 588

 Score = 34.5 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           L  I G      ++IC++  + P   V  L E  +  +++ +++
Sbjct: 197 LNNIKGFSPLLCEEICHRADVDPRLPVSSLSEDTIQNLKKVLKE 240


>gi|323497067|ref|ZP_08102090.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
           glycosylase [Vibrio sinaloensis DSM 21326]
 gi|323317911|gb|EGA70899.1| formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA
           glycosylase [Vibrio sinaloensis DSM 21326]
          Length = 269

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 7/52 (13%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
             K VV       G+G   + +      I P +   QL E +   +   I+Q
Sbjct: 159 DNKVVV-------GVGNIYANESLFSAGIHPTKAAGQLTERQWQLLVVEIKQ 203


>gi|302380629|ref|ZP_07269094.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3]
 gi|302311572|gb|EFK93588.1| flavoprotein family protein [Finegoldia magna ACS-171-V-Col3]
          Length = 400

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 12  AKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
            K +  A+  I  I  K    I     I P ++V+++ + E   +R+ I
Sbjct: 281 NKTIENAISKIT-I-KKLILPILKSANINPNKKVNEITKFERDNLRKII 327


>gi|297196039|ref|ZP_06913437.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153040|gb|EFH32113.1| formamidopyrimidine-DNA glycosylase H2TH domain family protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 204

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 14  RVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           RV  AL     + G+G   + +I  +  + P RR  +L ++E+ ++
Sbjct: 154 RVKAALTDQSVLAGLGNLLADEILWRAGLRPTRRADRLDDAELGRL 199


>gi|153813883|ref|ZP_01966551.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756]
 gi|331088166|ref|ZP_08337086.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145848279|gb|EDK25197.1| hypothetical protein RUMTOR_00089 [Ruminococcus torques ATCC 27756]
 gi|330408822|gb|EGG88285.1| DNA ligase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 653

 Score = 34.5 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 8/57 (14%)

Query: 3   RIAG---VNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           RI       +P   R++ +L  I  IG  +++ IC  L   P +RV +  E E+  I
Sbjct: 482 RIENARKTTLP---RLIYSL-GIPNIGISNAKMICRALGEDP-KRVIRATEEELSAI 533


>gi|220912308|ref|YP_002487617.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus
           A6]
 gi|219859186|gb|ACL39528.1| DNA-formamidopyrimidine glycosylase [Arthrobacter chlorophenolicus
           A6]
          Length = 289

 Score = 34.1 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMN-IKR 80
           I GIG   S +I +   I P      L    V  + +AI   + + G+          K 
Sbjct: 174 IAGIGNAYSDEILHAARISPFATAKSLDRETVQVLYEAI---HGILGEAMAEAQGKPPKD 230

Query: 81  LMDLGCYRGLRHRR-GLPV 98
           L D+       H R GLP 
Sbjct: 231 LKDVKRSHMRVHARTGLPC 249


>gi|303234064|ref|ZP_07320713.1| putative fibronectin-binding protein [Finegoldia magna BVS033A4]
 gi|302494989|gb|EFL54746.1| putative fibronectin-binding protein [Finegoldia magna BVS033A4]
          Length = 578

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75
           G     S++IC +  +    R+  L + E  +       IR+ I   +Y+    +     
Sbjct: 199 GFSPTISREICLRADLDYNIRLEDLNDEEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258

Query: 76  MNIKRLMDLGCY 87
           +    ++ L  Y
Sbjct: 259 LKDFHVIKLEKY 270


>gi|302380569|ref|ZP_07269034.1| putative fibronectin-binding protein [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311512|gb|EFK93528.1| putative fibronectin-binding protein [Finegoldia magna
           ACS-171-V-Col3]
          Length = 578

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQ-------IRQAIEQ-DYQVEGDLRRTVA 75
           G     S++IC +  +    R+  L + E  +       IR+ I   +Y+    +     
Sbjct: 199 GFSPTISREICLRADLDYNIRLEDLNDEEKSRFNQAFIDIRENIRNCNYEYSIVIDEDEK 258

Query: 76  MNIKRLMDLGCY 87
           +    ++ L  Y
Sbjct: 259 LKDFHVIKLEKY 270


>gi|116670807|ref|YP_831740.1| putative integration host factor IHF [Arthrobacter sp. FB24]
 gi|116610916|gb|ABK03640.1| putative integration host factor IHF [Arthrobacter sp. FB24]
          Length = 116

 Score = 34.1 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY 64
           L  + GIG  ++  I ++L I   RR+  L   +   +   + +++
Sbjct: 61  LEAMPGIGRVTAAAIMDELGIAASRRLRGLGIHQRRALVDFMNENH 106


>gi|153855784|ref|ZP_01996785.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814]
 gi|149751911|gb|EDM61842.1| hypothetical protein DORLON_02806 [Dorea longicatena DSM 13814]
          Length = 647

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 14  RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           RV+ +L  I GIG  +++ IC +L    E  +  + E E+ +I
Sbjct: 484 RVIYSL-GIAGIGLANAKVICRELKYDVESLLK-VSEEELNEI 524


>gi|153816142|ref|ZP_01968810.1| hypothetical protein RUMTOR_02390 [Ruminococcus torques ATCC 27756]
 gi|145846477|gb|EDK23395.1| hypothetical protein RUMTOR_02390 [Ruminococcus torques ATCC 27756]
          Length = 620

 Score = 34.1 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 15  VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V +AL     GI   ++++IC    I       +  +  +  +
Sbjct: 231 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 273


>gi|309805354|ref|ZP_07699404.1| conserved domain protein [Lactobacillus iners LactinV 09V1-c]
 gi|308165354|gb|EFO67587.1| conserved domain protein [Lactobacillus iners LactinV 09V1-c]
          Length = 271

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 12/78 (15%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQ---------LVESEVIQIRQAIEQDYQVEGDLRRTV 74
           GIG K+++ I ++L      ++           L + +   +   I    ++   L + V
Sbjct: 99  GIGKKTAEKIVSQLGEDLFTKIKDNNKVVEDLKLTDKQRQSLLNGILHMDELGEILTQAV 158

Query: 75  AMNIKRLMDL---GCYRG 89
              I + +       Y+G
Sbjct: 159 QYGINKSIITDLYNKYKG 176


>gi|149922422|ref|ZP_01910855.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1]
 gi|149816702|gb|EDM76193.1| Formamidopyrimidine-DNA glycosylase [Plesiocystis pacifica SIR-1]
          Length = 302

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           R   + RAL     + GIG   S +I +   + P +   +L  +E+  +
Sbjct: 151 RNHTLKRALTDPRILDGIGNAYSDEILHAAKLSPIKWTSRLSAAEIEAL 199


>gi|255658379|ref|ZP_05403788.1| fibronectin/fibrinogen binding protein [Mitsuokella multacida DSM
           20544]
 gi|260849710|gb|EEX69717.1| fibronectin/fibrinogen binding protein [Mitsuokella multacida DSM
           20544]
          Length = 591

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           G G  S++++C    + P  R+  L E++   +  A+++
Sbjct: 201 GFGPVSAKEVCFSAGLAPSMRIEALDEADFKAVENALQE 239


>gi|289582766|ref|YP_003481232.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
 gi|289532319|gb|ADD06670.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
          Length = 209

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 16/79 (20%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQD----ICNKLAIPPERRVHQLVESEVIQIRQA 59
           +AGV+      VV  L  I GIG  +++     +  +  I P   +  L       +R+ 
Sbjct: 108 LAGVD---NDEVVDRLTDIKGIGEWTARMYLLFVLERPDILP---LGDL------AVRRG 155

Query: 60  IEQDYQVEGDLRRTVAMNI 78
           IEQ Y    +L R    +I
Sbjct: 156 IEQLYSNGDELTRAEMRDI 174


>gi|153003378|ref|YP_001377703.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5]
 gi|152026951|gb|ABS24719.1| DNA-formamidopyrimidine glycosylase [Anaeromyxobacter sp. Fw109-5]
          Length = 313

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               + RAL     + GIG   S +I ++  + P +   +L + E+ ++
Sbjct: 151 ENHTLKRALTDPSLLSGIGNAYSDEILHRARLSPVKLTSRLTDEELARL 199


>gi|158313548|ref|YP_001506056.1| integration host factor-like protein [Frankia sp. EAN1pec]
 gi|158108953|gb|ABW11150.1| putative integration host factor-like protein; putative coiled-coil
           domain [Frankia sp. EAN1pec]
          Length = 106

 Score = 34.1 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +Q I  +L I P RR+  L   +   + + 
Sbjct: 61  LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101


>gi|288918226|ref|ZP_06412581.1| hypothetical protein FrEUN1fDRAFT_2277 [Frankia sp. EUN1f]
 gi|288350396|gb|EFC84618.1| hypothetical protein FrEUN1fDRAFT_2277 [Frankia sp. EUN1f]
          Length = 106

 Score = 34.1 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +Q I  +L I P RR+  L   +   + + 
Sbjct: 61  LESLPGVGRVRAQKIRERLGISPTRRLRGLGAKQRAALLEE 101


>gi|262040684|ref|ZP_06013922.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042048|gb|EEW43081.1| DNA-formamidopyrimidine glycosylase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 269

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  Q+ + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202


>gi|184159399|ref|YP_001847738.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU]
 gi|294841648|ref|ZP_06786331.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6014059]
 gi|183210993|gb|ACC58391.1| Formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ACICU]
 gi|323519338|gb|ADX93719.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 274

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|119492791|ref|ZP_01623877.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106]
 gi|119452944|gb|EAW34116.1| formamidopyrimidine-DNA glycosylase [Lyngbya sp. PCC 8106]
          Length = 301

 Score = 34.1 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMD 83
           G+G   + +      I P  R  +L  +++  +   + Q  +   D   T   N   +  
Sbjct: 195 GVGNIYADETLFLSGISPTTRCAELTPAQIETLHAQLVQVLKTAIDAGGTTVRNFLNVAG 254

Query: 84  L-GCYRG---LRHRRGLPVR 99
           + G Y G   + +R G P R
Sbjct: 255 VNGNYAGQAWVYNRAGQPCR 274


>gi|322509311|gb|ADX04765.1| mutM [Acinetobacter baumannii 1656-2]
          Length = 274

 Score = 34.1 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|331089436|ref|ZP_08338335.1| hypothetical protein HMPREF1025_01918 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330404804|gb|EGG84342.1| hypothetical protein HMPREF1025_01918 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 580

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 15  VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V +AL     GI   ++++IC    I       +  +  +  +
Sbjct: 191 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 233


>gi|317500463|ref|ZP_07958687.1| fibronectin-binding protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316898218|gb|EFV20265.1| fibronectin-binding protein [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 580

 Score = 34.1 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 15  VVRAL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V +AL     GI   ++++IC    I       +  +  +  +
Sbjct: 191 VAKALYTSFTGISPVTAEEICYLAGIDSTLPAKEYSQDVLFHL 233


>gi|294637898|ref|ZP_06716167.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685]
 gi|291088924|gb|EFE21485.1| DNA-formamidopyrimidine glycosylase [Edwardsiella tarda ATCC 23685]
          Length = 248

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E+  + Q I
Sbjct: 139 DNKLVV-------GVGNIYASESLFSAQIHPDRLAGSLSRDEIALLVQTI 181


>gi|196230365|ref|ZP_03129227.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus
           Ellin428]
 gi|196225295|gb|EDY19803.1| DNA-formamidopyrimidine glycosylase [Chthoniobacter flavus
           Ellin428]
          Length = 264

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 15  VVRAL---CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           V  AL       G+G   + +I  +  I P     +L   ++  I
Sbjct: 157 VKAALLVQTAFPGVGNWMADEILWQARIDPRALCGKLSRKQIAAI 201


>gi|193078273|gb|ABO13237.2| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC
           17978]
          Length = 274

 Score = 34.1 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|126642855|ref|YP_001085839.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC
           17978]
          Length = 208

 Score = 34.1 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 80  KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 139

Query: 66  VEGDL 70
              DL
Sbjct: 140 SAIDL 144


>gi|150008625|ref|YP_001303368.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis
           ATCC 8503]
 gi|149937049|gb|ABR43746.1| formamidopyrimidine-DNA glycosylase [Parabacteroides distasonis
           ATCC 8503]
          Length = 277

 Score = 34.1 bits (78), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
             I G+G    QDI     I P+R++  L E ++ ++
Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205


>gi|302389581|ref|YP_003825402.1| Fibronectin-binding A domain protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200209|gb|ADL07779.1| Fibronectin-binding A domain protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 584

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 17/33 (51%)

Query: 30  SQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           S++I  +  +   + V +L E E  +I + + +
Sbjct: 214 SKEILFRSGVDANKLVSELTEEEKRKIAETLAK 246


>gi|327310398|ref|YP_004337295.1| DNA topoisomerase VI subunit B [Thermoproteus uzoniensis 768-20]
 gi|326946877|gb|AEA11983.1| DNA topoisomerase VI, B subunit [Thermoproteus uzoniensis 768-20]
          Length = 528

 Score = 34.1 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 18/39 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             G+G   ++      A+ P + V  L + E++ + + +
Sbjct: 260 FDGVGEGLARSFLEWAALDPNKPVGSLTQDEIVLLVEKM 298


>gi|170291097|ref|YP_001737913.1| RNA-binding protein, snRNP-like protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175177|gb|ACB08230.1| RNA-binding protein, snRNP-like protein [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 624

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           I G  IP  ++V + L  + G+G     ++  KL I  E ++  L   ++ ++   I  
Sbjct: 169 ILG-RIPPEEKVWKVLTGL-GLGPPYLNEVLLKLKIDAEVKISDL---DLEKLADEISD 222


>gi|312089245|ref|XP_003146172.1| hypothetical protein LOAG_10600 [Loa loa]
 gi|307758665|gb|EFO17899.1| hypothetical protein LOAG_10600 [Loa loa]
          Length = 403

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 1/47 (2%)

Query: 32  DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNI 78
           ++     I  E    +L E ++  I   IE     +    +    +I
Sbjct: 57  EVLEVAGIDIE-NSGELTEEQINTIMSLIEPSGSTQQHDLKQEQADI 102


>gi|255505426|ref|ZP_05346027.3| helicase, RecD/TraA family [Bryantella formatexigens DSM 14469]
 gi|255267960|gb|EET61165.1| helicase, RecD/TraA family [Bryantella formatexigens DSM 14469]
          Length = 1010

 Score = 34.1 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA--IEQDYQVEGDLRRTVAMNIK 79
           I G+G + +Q I  K          +++E+E+ ++R+   I +   ++          IK
Sbjct: 344 IKGVGPRFAQRIVRKFGTD----TIEVIENEIGRLREVEGIGEKRILQIKESWERQKEIK 399

Query: 80  RLM 82
            +M
Sbjct: 400 NVM 402


>gi|239501755|ref|ZP_04661065.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB900]
          Length = 274

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|169632504|ref|YP_001706240.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii SDF]
 gi|229464467|sp|B0VRV3|FPG_ACIBS RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|169151296|emb|CAO99994.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii]
          Length = 274

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|78042786|ref|YP_359485.1| shikimate kinase/3-dehydroquinate synthase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994901|gb|ABB13800.1| shikimate kinase/3-dehydroquinate synthase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 529

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 18/80 (22%)

Query: 24  GI--GFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDY--------------QVE 67
           GI  G   +  I  +  +  +  +  L E E  +IR+ IE++Y               ++
Sbjct: 432 GILHGEAVALGILWEAKLSKD--LGYLREEEWEKIREFIEKNYAYLKLSLNPDSLLVFMD 489

Query: 68  GDLRRTVAMNIKRLMDLGCY 87
            D +    +    L  +G Y
Sbjct: 490 KDKKNREDIAFMLLKKIGEY 509


>gi|283833033|ref|ZP_06352774.1| protein UmuC [Citrobacter youngae ATCC 29220]
 gi|291070650|gb|EFE08759.1| protein UmuC [Citrobacter youngae ATCC 29220]
          Length = 421

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 8   NIPRAKRVVRALC--YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           NI   ++++ AL    + G+G + S+   + + I   + V +L ++++  IR+
Sbjct: 168 NIDHQRKLMAALSVDKVWGVGRRISKK-LDAMGI---KTVRELADTDIRFIRK 216


>gi|288933010|ref|YP_003437069.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
 gi|290511803|ref|ZP_06551171.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
 gi|288887739|gb|ADC56057.1| formamidopyrimidine-DNA glycosylase [Klebsiella variicola At-22]
 gi|289775593|gb|EFD83593.1| formamidopyrimidine-DNA glycosylase [Klebsiella sp. 1_1_55]
          Length = 269

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  Q+ + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202


>gi|225873334|ref|YP_002754793.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC
           51196]
 gi|225793175|gb|ACO33265.1| DNA-formamidopyrimidine glycosylase [Acidobacterium capsulatum ATCC
           51196]
          Length = 298

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%)

Query: 4   IAGVNIPRAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEV 53
           IA V +   ++V      I G+G     ++C    + P  RVH+L   +V
Sbjct: 155 IANVLL--NQQV------IAGLGNVFKSEVCFVCGLSPFARVHELSPDQV 196


>gi|206576628|ref|YP_002236003.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
 gi|238066645|sp|B5XTG8|FPG_KLEP3 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|206565686|gb|ACI07462.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae 342]
          Length = 269

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  Q+ + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202


>gi|154493758|ref|ZP_02033078.1| hypothetical protein PARMER_03099 [Parabacteroides merdae ATCC
           43184]
 gi|154086508|gb|EDN85553.1| hypothetical protein PARMER_03099 [Parabacteroides merdae ATCC
           43184]
          Length = 197

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 4/31 (12%)

Query: 16  VRALCYIHGIGFKSSQDICNKLAIPPERRVH 46
             AL  + GIG K++Q I     +  + +V 
Sbjct: 106 ETALTSVKGIGLKTAQRIL----VDLKNKVK 132


>gi|152972481|ref|YP_001337627.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|166215630|sp|A6TFM6|FPG_KLEP7 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|150957330|gb|ABR79360.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 269

 Score = 34.1 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  Q+ + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202


>gi|238897076|ref|YP_002921822.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|329996932|ref|ZP_08302629.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
 gi|238549404|dbj|BAH65755.1| formamidopyrimidine-DNA glycosylase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328539222|gb|EGF65251.1| DNA-formamidopyrimidine glycosylase [Klebsiella sp. MS 92-3]
          Length = 269

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  Q+ + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFSAGIHPDRLASSLSREECEQLVKVI 202


>gi|293611034|ref|ZP_06693333.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826686|gb|EFF85052.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 274

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|163793016|ref|ZP_02186992.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199]
 gi|159181662|gb|EDP66174.1| DNA-formamidopyrimidine glycosylase [alpha proteobacterium BAL199]
          Length = 300

 Score = 34.1 bits (78), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 11  RAKRVVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
               + RAL       GIG   S +I +   + P     +L E E+ ++
Sbjct: 151 ENHTLKRALTDPHLFSGIGNAYSDEILHAAKLSPIALSQRLNEDEITRL 199


>gi|197117207|ref|YP_002137634.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem]
 gi|197086567|gb|ACH37838.1| formamidopyrimidine-DNA glycosylase [Geobacter bemidjiensis Bem]
          Length = 261

 Score = 34.1 bits (78), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I GIG   + +I  +  I P+    +L    V  + +AI
Sbjct: 160 IGGIGNAYADEILWEARISPKSVAGKLPPEAVSALARAI 198


>gi|301309603|ref|ZP_07215545.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3]
 gi|300832692|gb|EFK63320.1| DNA-formamidopyrimidine glycosylase [Bacteroides sp. 20_3]
          Length = 277

 Score = 34.1 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
             I G+G    QDI     I P+R++  L E ++ ++
Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205


>gi|227432492|ref|ZP_03914478.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227351763|gb|EEJ42003.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 277

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I GIG   + ++  +  I P+   + L E ++  +R  I
Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANI 207


>gi|169794826|ref|YP_001712619.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE]
 gi|215482373|ref|YP_002324555.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii
           AB307-0294]
 gi|294836836|ref|ZP_06781519.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6013113]
 gi|294857107|ref|ZP_06794876.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. 6013150]
 gi|301510336|ref|ZP_07235573.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB058]
 gi|169147753|emb|CAM85616.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AYE]
 gi|213988590|gb|ACJ58889.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii
           AB307-0294]
          Length = 274

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 146 KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTLQQIEKLVVEIKRILK 205

Query: 66  VEGDL 70
              DL
Sbjct: 206 SAIDL 210


>gi|116617644|ref|YP_818015.1| formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic
           site) lyase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096491|gb|ABJ61642.1| DNA-(apurinic or apyrimidinic site) lyase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 277

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             I GIG   + ++  +  I P+   + L E ++  +R  I
Sbjct: 167 TQIAGIGNIYADEVLWQSKIHPKTPANVLDEVQLSVLRANI 207


>gi|117621626|ref|YP_853892.1| hypothetical protein BAPKO_2055 [Borrelia afzelii PKo]
 gi|218964028|ref|YP_002455464.1| P45-13 [Borrelia afzelii ACA-1]
 gi|110891012|gb|ABH02177.1| hypothetical protein BAPKO_2055 [Borrelia afzelii PKo]
 gi|216752919|gb|ACJ73533.1| P45-13 [Borrelia afzelii ACA-1]
          Length = 399

 Score = 33.7 bits (77), Expect = 7.4,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 32 DICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
           I     +    +   L E ++  I + I+   Q+E D ++ +  NI +
Sbjct: 20 IISCNANMNTNDKNKALNEYKLQNISEVIKNSLQIESDFKKELEANINK 68


>gi|256004604|ref|ZP_05429582.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM
           2360]
 gi|255991476|gb|EEU01580.1| Fibronectin-binding A domain protein [Clostridium thermocellum DSM
           2360]
          Length = 275

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           L  I G      ++IC++  + P   V  L E  +  +++ +++
Sbjct: 197 LNNIKGFSPLLCEEICHRADVDPRLPVSSLSEDTIQNLKKVLKE 240


>gi|296122878|ref|YP_003630656.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM
           3776]
 gi|296015218|gb|ADG68457.1| DNA-formamidopyrimidine glycosylase [Planctomyces limnophilus DSM
           3776]
          Length = 301

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEG 68
           G+G   + +I ++  I P     QL   E  ++    RQ +E   Q EG
Sbjct: 183 GVGNLYASEILHRAGISPLSASSQLHPEEWERLANAARQILELAIQYEG 231


>gi|160939139|ref|ZP_02086490.1| hypothetical protein CLOBOL_04033 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438102|gb|EDP15862.1| hypothetical protein CLOBOL_04033 [Clostridium bolteae ATCC
           BAA-613]
          Length = 428

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 29  SSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVA 75
            S  +   L + P++R   + E E+  I     +   +E + R  + 
Sbjct: 154 MSLIVLKVLHVDPDKRNDDITEDELRTIVDVGHEKGVIESEEREMIN 200


>gi|56696863|ref|YP_167225.1| 50S ribosomal protein L21/unknown domain fusion protein [Ruegeria
           pomeroyi DSS-3]
 gi|81676250|sp|Q5LRY0|RL21_SILPO RecName: Full=50S ribosomal protein L21
 gi|56678600|gb|AAV95266.1| ribosomal protein L21 [Ruegeria pomeroyi DSS-3]
          Length = 193

 Score = 33.7 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVE 67
           L  I G+G  +++ +     I     +  L + ++  I     +   VE
Sbjct: 138 LTKITGVGPAAAKKLVE-AGIGSFAALAALSDEQIAAIDAVKVKPEWVE 185


>gi|224593550|gb|ACN60046.1| recombination activating protein 1 [Trioceros balebicornutus]
          Length = 273

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 49  VESEVIQIRQAIEQD-YQVEGDLRRTVAMNIKRLMDL--GCYRGLRHRRGLPVRG 100
            ++E+ +I Q + +D + +          N++ L  +  G ++   H+R  PV G
Sbjct: 18  TDTELNKIIQTVNKDVFHLSQKEIENHQANLQHLCRICAGSFKSDAHKRSYPVHG 72


>gi|78355589|ref|YP_387038.1| DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA
           glycosylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217994|gb|ABB37343.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 295

 Score = 33.7 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 4/49 (8%)

Query: 11  RAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ 55
             ++ V+AL      I G+G   + +   +  I P+ R       E  +
Sbjct: 171 ERRKAVKALLLDQTVIAGVGNIYADESLFRAGIRPDARPGDWTRDEAER 219


>gi|219556809|ref|ZP_03535885.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T17]
          Length = 160

 Score = 33.7 bits (77), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 45  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 102

Query: 82  MDLGCYRGLRH--RRGLPV 98
                  GLR   R GLP 
Sbjct: 103 KG-EKRSGLRVYARTGLPC 120


>gi|149186174|ref|ZP_01864488.1| hypothetical protein ED21_30594 [Erythrobacter sp. SD-21]
 gi|148830205|gb|EDL48642.1| hypothetical protein ED21_30594 [Erythrobacter sp. SD-21]
          Length = 155

 Score = 33.7 bits (77), Expect = 7.8,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           L  I G+G K +      L +    ++    ++E+ +I   +
Sbjct: 80  LTRIKGVGPKLAAT-LESLGVTSFAQIAAWDDAEIDRIDSQL 120


>gi|289568914|ref|ZP_06449141.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T17]
 gi|289542668|gb|EFD46316.1| formamidopyrimidine-DNA glycosylase [Mycobacterium tuberculosis
           T17]
          Length = 158

 Score = 33.7 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRL 81
           I GIG   S +I +   I P     +L  +++  + +A+     +   +RR+V      L
Sbjct: 43  IAGIGNAYSDEILHVAKISPFATAGKLSGAQLTCLHEAMAS--VLSDAVRRSVGQGAAML 100

Query: 82  MDLGCYRGLRH--RRGLPV 98
                  GLR   R GLP 
Sbjct: 101 KGEKR-SGLRVYARTGLPC 118


>gi|300088594|ref|YP_003759116.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528327|gb|ADJ26795.1| dimethyladenosine transferase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 306

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDI--CNKLAIPPERRVHQLVESEVIQIRQA 59
           R K++  AL    G+G   +  I    +  I PERR   L   E + +R+ 
Sbjct: 252 RRKQLANALSG--GLGADKANVIQYLKQAGIVPERRAETLSIDEWLALREV 300


>gi|189467099|ref|ZP_03015884.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM
           17393]
 gi|189435363|gb|EDV04348.1| hypothetical protein BACINT_03483 [Bacteroides intestinalis DSM
           17393]
          Length = 278

 Score = 33.7 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESE 52
             I G+G   +QDI     I P+++V  L + +
Sbjct: 170 QRIPGVGNGVTQDILFNAGIHPKQKVFDLSDGQ 202


>gi|145541229|ref|XP_001456303.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424114|emb|CAK88906.1| unnamed protein product [Paramecium tetraurelia]
          Length = 263

 Score = 33.7 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 10/62 (16%)

Query: 8  NIPRAKRVVRALCYIHGIGFKSSQDICNK---LAIPPERRVHQLVESEVIQIRQAIEQDY 64
          N+P    ++       GIG   ++ + ++   + +    +       EV  IR+ IE  Y
Sbjct: 4  NLPGKVALITGSTS--GIGLSVAKKLASQGVHIGLNGFAK-----PEEVAAIRKEIEGQY 56

Query: 65 QV 66
          +V
Sbjct: 57 KV 58


>gi|116872993|ref|YP_849774.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116741871|emb|CAK20995.1| formamidopyrimidine-DNA glycosylase [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 273

 Score = 33.7 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           GIG   + +IC +  + PER  + L   E+ +I
Sbjct: 170 GIGNIYADEICFEAKVQPERPANSLSNKEIKRI 202


>gi|297588329|ref|ZP_06946972.1| fibronectin-binding protein [Finegoldia magna ATCC 53516]
 gi|297573702|gb|EFH92423.1| fibronectin-binding protein [Finegoldia magna ATCC 53516]
          Length = 578

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           G     S++IC +  +   RR+  L E+E ++  QA
Sbjct: 199 GFSPTISREICLRADLDFNRRLEDLTENEKLRFNQA 234


>gi|19548890|gb|AAL90842.1|AF483983_1 UmuC protein [Escherichia coli]
          Length = 410

 Score = 33.7 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 8   NIPRAKRVVRALC--YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQ 58
           N+ R ++++ AL    + GIG ++S+   + + I   + V  L ++++  IR+
Sbjct: 168 NLERQRKLMSALSVDKVWGIGRRNSKK-LDAMGI---KTVLDLADTDIRFIRK 216


>gi|301166437|emb|CBW26013.1| formamidopyrimidine-DNA glycosylase [Bacteriovorax marinus SJ]
          Length = 270

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G G     +IC +  + P RR   L + E+I++
Sbjct: 167 GTGNYIVNEICARAGVRPTRRNKSLTKDEIIKM 199


>gi|289422325|ref|ZP_06424175.1| fibronectin-binding protein [Peptostreptococcus anaerobius 653-L]
 gi|289157270|gb|EFD05885.1| fibronectin-binding protein [Peptostreptococcus anaerobius 653-L]
          Length = 588

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           I G+    +++IC +L I       ++ + E+ +I + I 
Sbjct: 202 ILGLSPTVAREICYRLDIDKSMSSLEIGDGEIDRIIKEIN 241


>gi|260557193|ref|ZP_05829409.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC
           19606]
 gi|260409299|gb|EEX02601.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii ATCC
           19606]
          Length = 274

 Score = 33.7 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 15  VVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70
           +  AL     + G+G   + +    + I P +    L   ++ ++   I++  +   DL
Sbjct: 152 IKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVVEIKRILKSAIDL 210


>gi|269956005|ref|YP_003325794.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304686|gb|ACZ30236.1| DNA-formamidopyrimidine glycosylase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 298

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKR 80
            I GIG   S +I +     P +        +V ++  AI     + G +  +     K 
Sbjct: 182 AIAGIGNAYSDEILHVARFSPFKLTRSFTPDDVARLHAAIVD--TLTGAVAASSGKPAKE 239

Query: 81  LMDLGCYRGLRHRRGLPVRGQRT 103
           L D         R G+ V G RT
Sbjct: 240 LKDAK-------RAGMRVHG-RT 254


>gi|183597227|ref|ZP_02958720.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827]
 gi|188023541|gb|EDU61581.1| hypothetical protein PROSTU_00470 [Providencia stuartii ATCC 25827]
          Length = 269

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
             K VV       G+G   + +      I PE+  H L   + I + Q I++  Q
Sbjct: 160 DNKVVV-------GVGNIYANEALFAAGISPEKITHTLTLEQSIDLVQQIKKVLQ 207


>gi|154151277|ref|YP_001404895.1| DNA topoisomerase VI subunit B [Candidatus Methanoregula boonei
           6A8]
 gi|153999829|gb|ABS56252.1| DNA topoisomerase VI, B subunit [Methanoregula boonei 6A8]
          Length = 600

 Score = 33.7 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 21/37 (56%)

Query: 25  IGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIE 61
           +G K++Q++C++  +    +V  L   E+  +  A++
Sbjct: 263 VGKKTAQEMCDRAGLKVTAKVAGLSADELKNLLAAMQ 299


>gi|256841344|ref|ZP_05546851.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13]
 gi|256737187|gb|EEU50514.1| formamidopyrimidine-DNA glycosylase [Parabacteroides sp. D13]
          Length = 275

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 20  CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
             I G+G    QDI     I P+R++  L E ++ ++
Sbjct: 169 QRIPGLGNGVCQDILFNARISPKRKISTLSEEDIDRL 205


>gi|218282128|ref|ZP_03488427.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989]
 gi|218216921|gb|EEC90459.1| hypothetical protein EUBIFOR_01002 [Eubacterium biforme DSM 3989]
          Length = 273

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 22/87 (25%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLRRTVAMNIK 79
           GIG   + +IC  L + P  R  +L + +  +I    R+ ++      G           
Sbjct: 170 GIGNIYADEICFALGLDPRSRACKLSKKDCDKIVLETRRILQGATHYGGT---------- 219

Query: 80  RLMDLGCYR---GL--RHRRGLPVRGQ 101
               +  Y    G+  R +  L V  Q
Sbjct: 220 ---TIRSYTSSLGVTGRFQLHLKVHDQ 243


>gi|152977704|ref|YP_001343333.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes
           130Z]
 gi|171472905|sp|A6VKA1|FPG_ACTSZ RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|150839427|gb|ABR73398.1| formamidopyrimidine-DNA glycosylase [Actinobacillus succinogenes
           130Z]
          Length = 270

 Score = 33.7 bits (77), Expect = 8.5,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 22/42 (52%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           GIG   + ++  +  + PE+   ++ +++   + + I+++  
Sbjct: 166 GIGNIYANEVLFQCGLHPEKPAGKITKTQAALLTETIKKELT 207


>gi|254574788|pdb|3A45|A Chain A, Crystal Structure Of Mvnei1_2
 gi|254574789|pdb|3A45|B Chain B, Crystal Structure Of Mvnei1_2
 gi|254574790|pdb|3A46|A Chain A, Crystal Structure Of Mvnei1THF COMPLEX
 gi|254574791|pdb|3A46|B Chain B, Crystal Structure Of Mvnei1THF COMPLEX
          Length = 289

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G     +I  +  I P +    L + E+  +
Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202


>gi|254574787|pdb|3A42|A Chain A, Crystal Structure Of Mvnei1
          Length = 295

 Score = 33.7 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G     +I  +  I P +    L + E+  +
Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202


>gi|301345445|ref|ZP_07226186.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB056]
 gi|301595026|ref|ZP_07240034.1| formamidopyrimidine-DNA glycosylase [Acinetobacter baumannii AB059]
          Length = 202

 Score = 33.7 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 11  RAKRV--VRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQ 65
           + K V    AL     + G+G   + +    + I P +    L   ++ ++   I++  +
Sbjct: 74  KNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTLQQIEKLVVEIKRILK 133

Query: 66  VEGDL 70
              DL
Sbjct: 134 SAIDL 138


>gi|311977698|ref|YP_003986818.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba
           polyphaga mimivirus]
 gi|76363876|sp|Q5UQ00|FPG_MIMIV RecName: Full=Probable formamidopyrimidine-DNA glycosylase;
           Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic
           or apyrimidinic site) lyase; Short=AP lyase
 gi|55416935|gb|AAV50585.1| formamidopyrimidine-DNA glycosylase [Acanthamoeba polyphaga
           mimivirus]
 gi|308204334|gb|ADO18135.1| probable formamidopyrimidine-DNA glycosylase [Acanthamoeba
           polyphaga mimivirus]
          Length = 287

 Score = 33.7 bits (77), Expect = 8.7,   Method: Composition-based stats.
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
           G+G     +I  +  I P +    L + E+  +
Sbjct: 170 GLGNYLVAEILYRAKIDPHKLGSNLTDQEIENL 202


>gi|297743498|emb|CBI36365.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 9   IPRAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ-- 62
           + + K  ++AL     YI GIG   + ++     I P +    L       + Q I+Q  
Sbjct: 164 LSKKKIAIKALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVI 223

Query: 63  DYQVEGDLRRTV 74
            Y VE D   ++
Sbjct: 224 QYAVEVDAECSL 235


>gi|146309771|ref|YP_001174845.1| formamidopyrimidine-DNA glycosylase [Enterobacter sp. 638]
 gi|166988461|sp|A4W514|FPG_ENT38 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|145316647|gb|ABP58794.1| DNA-(apurinic or apyrimidinic site) lyase [Enterobacter sp. 638]
          Length = 269

 Score = 33.7 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L E E   + + I
Sbjct: 160 DNKLVV-------GVGNIYASESLFAAGIHPDRLASSLSEQECEILVKVI 202


>gi|160933337|ref|ZP_02080725.1| hypothetical protein CLOLEP_02182 [Clostridium leptum DSM 753]
 gi|156867214|gb|EDO60586.1| hypothetical protein CLOLEP_02182 [Clostridium leptum DSM 753]
          Length = 628

 Score = 33.7 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 18  ALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQD 63
           +L  I GIG   ++ +         + +  + ++E+ ++ QA   +
Sbjct: 557 SLTSIPGIGPSRAKALLKSF-----KTIKNIAQAELKELEQAPSMN 597


>gi|293400878|ref|ZP_06645023.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291305904|gb|EFE47148.1| DNA-formamidopyrimidine glycosylase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 276

 Score = 33.7 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           I GIG   + +IC  L + PE +++ L + +  ++ Q 
Sbjct: 169 IAGIGNIYADEICFALGMHPETKIYHLRKKDFERLLQE 206


>gi|315658134|ref|ZP_07911006.1| competence protein comEA [Staphylococcus lugdunensis M23590]
 gi|315496463|gb|EFU84786.1| competence protein comEA [Staphylococcus lugdunensis M23590]
          Length = 226

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 22/51 (43%), Gaps = 7/51 (13%)

Query: 16  VRALCYIHGIGFKSSQDICNK-------LAIPPERRVHQLVESEVIQIRQA 59
             +L  + GIG   +++I N         ++   +++  + E    +++Q 
Sbjct: 173 EASLTKVPGIGPSKAKEILNYKEQHGQFTSVDELKKIKGIGEKTFEKLKQY 223


>gi|311277444|ref|YP_003939675.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
 gi|308746639|gb|ADO46391.1| formamidopyrimidine-DNA glycosylase [Enterobacter cloacae SCF1]
          Length = 269

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 7/50 (14%)

Query: 11  RAKRVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
             K VV       G+G   + +      I P+R    L   E  ++ +AI
Sbjct: 160 DNKLVV-------GVGNIYASESLFAAGIHPDRLASSLSADECERLVRAI 202


>gi|296283925|ref|ZP_06861923.1| DNA-formamidopyrimidine glycosylase [Citromicrobium bathyomarinum
           JL354]
          Length = 260

 Score = 33.7 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQI----RQAIEQDYQVEGDLR 71
           G+G   S +I  + AI P+R+   L +S++  I    R  +      E D  
Sbjct: 167 GVGNLWSDEILYRTAIDPQRKGTDLSDSQLGDIYDAMRDILHAVVDTEADYS 218


>gi|313678500|ref|YP_004056240.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45]
 gi|312950460|gb|ADR25055.1| DNA-formamidopyrimidine glycosylase [Mycoplasma bovis PG45]
          Length = 279

 Score = 33.7 bits (77), Expect = 9.6,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 21  YIHGIGFKSSQDICNKLAIPPERRVH 46
           YI GIG   + +I     I P  +V+
Sbjct: 166 YILGIGNIYANEILYLSGINPWTKVN 191


>gi|317497366|ref|ZP_07955689.1| fibronectin-binding protein A [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895435|gb|EFV17594.1| fibronectin-binding protein A [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 580

 Score = 33.3 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 18  AL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVES-------EVIQIRQAIEQD 63
           AL   I G+    + ++C +  +        L +        +++++   +E +
Sbjct: 194 ALYTSITGMSPLIANELCYRAGLDGNASTDSLTDDSAAGLYGQLVKLNALVEDE 247


>gi|311742361|ref|ZP_07716170.1| integration host factor MihF [Aeromicrobium marinum DSM 15272]
 gi|311313989|gb|EFQ83897.1| integration host factor MihF [Aeromicrobium marinum DSM 15272]
          Length = 106

 Score = 33.3 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 24/43 (55%)

Query: 14 RVVRALCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQI 56
          RV+  L  + G+G   +++I +++ I   RR+  L  +++  +
Sbjct: 56 RVIDLLQSMPGVGKVRAREIMDRIGIADSRRLRGLGANQIQAL 98


>gi|91205062|ref|YP_537417.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C]
 gi|157827633|ref|YP_001496697.1| formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389]
 gi|123388145|sp|Q1RJY6|FPG_RICBR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|166198741|sp|A8GXR0|FPG_RICB8 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|91068606|gb|ABE04328.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii RML369-C]
 gi|157802937|gb|ABV79660.1| Formamidopyrimidine-DNA glycosidase [Rickettsia bellii OSU 85-389]
          Length = 273

 Score = 33.3 bits (76), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 18/39 (46%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQ 62
           G+G   + +  +   I P++    L + E+  +  A++ 
Sbjct: 169 GVGNIYASESLHLAKIHPDKFGKDLNDDEIKNLIAAVKN 207


>gi|225442888|ref|XP_002263635.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 403

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 8/69 (11%)

Query: 9   IPRAKRVVRAL----CYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQ----IRQAI 60
           + + K  ++AL     YI GIG   + ++     I P +    L           I+Q I
Sbjct: 164 LSKKKIAIKALLLDQSYIAGIGNWLADEVLYHARIHPLQVASSLTRESCETLHQCIKQVI 223

Query: 61  EQDYQVEGD 69
           E+  +V  D
Sbjct: 224 EKAMEVGAD 232


>gi|81300132|ref|YP_400340.1| formamidopyrimidine-DNA glycosylase [Synechococcus elongatus PCC
           7942]
 gi|60416387|sp|Q08079|FPG_SYNP6 RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA
           glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic
           site) lyase mutM; Short=AP lyase mutM
 gi|81169013|gb|ABB57353.1| DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA
           glycosylase [Synechococcus elongatus PCC 7942]
          Length = 282

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 24  GIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           GIG   + +   +  I P     +L + +  ++R+AI
Sbjct: 177 GIGNIYADESLFRTGIHPTTPSDRLTKIQAEKLREAI 213


>gi|67526343|ref|XP_661233.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
 gi|40740647|gb|EAA59837.1| hypothetical protein AN3629.2 [Aspergillus nidulans FGSC A4]
 gi|259481842|tpe|CBF75741.1| TPA: formamidopyrimidine-DNA glycosylase, putative (AFU_orthologue;
           AFUA_4G11930) [Aspergillus nidulans FGSC A4]
          Length = 363

 Score = 33.3 bits (76), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 22  IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAI 60
           I GIG     +I     I PE+  + L + +V ++  +I
Sbjct: 190 ISGIGNWMGDEILYHAKIHPEQYSNTLTDDQVKELHSSI 228


>gi|312195550|ref|YP_004015611.1| integration host factor-like protein [Frankia sp. EuI1c]
 gi|311226886|gb|ADP79741.1| integration host factor-like protein [Frankia sp. EuI1c]
          Length = 106

 Score = 33.3 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 19  LCYIHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQA 59
           L  + G+G   +Q I  +L I P RR+  L   +   + + 
Sbjct: 61  LEALPGVGRVRAQRIRERLGISPTRRLRGLGAKQRAALLEE 101


>gi|260548865|ref|ZP_05823087.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624]
 gi|260408033|gb|EEX01504.1| formamidopyrimidine-DNA glycosylase [Acinetobacter sp. RUH2624]
          Length = 274

 Score = 33.3 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 15  VVRALCY---IHGIGFKSSQDICNKLAIPPERRVHQLVESEVIQIRQAIEQDYQVEGDL 70
           +  AL     + G+G   + +    + I P +    L   ++ ++   I++  +   DL
Sbjct: 152 IKIALMDNHVVVGVGNIYATESLFNVGIHPAQPAGDLTMQQIEKLVIEIKRILKSAIDL 210


>gi|167767305|ref|ZP_02439358.1| hypothetical protein CLOSS21_01824 [Clostridium sp. SS2/1]
 gi|167711280|gb|EDS21859.1| hypothetical protein CLOSS21_01824 [Clostridium sp. SS2/1]
 gi|291559387|emb|CBL38187.1| Predicted RNA-binding protein homologous to eukaryotic snRNP
           [butyrate-producing bacterium SSC/2]
          Length = 580

 Score = 33.3 bits (76), Expect = 9.9,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 18  AL-CYIHGIGFKSSQDICNKLAIPPERRVHQLVES-------EVIQIRQAIEQD 63
           AL   I G+    + ++C +  +        L +        +++++   +E +
Sbjct: 194 ALYTSITGMSPLIANELCYRAGLDGNASTDSLTDDSAAGLYGQLVKLNALVEDE 247


>gi|317129208|ref|YP_004095490.1| flagellar motor switch protein FliG [Bacillus cellulosilyticus
          DSM 2522]
 gi|315474156|gb|ADU30759.1| flagellar motor switch protein FliG [Bacillus cellulosilyticus
          DSM 2522]
          Length = 336

 Score = 33.3 bits (76), Expect = 10.0,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 26 GFKSSQDICNKLAIPPERRV-HQLVESEVIQIRQAIEQDYQVEGDLRRTVAMNIKRLMDL 84
          G + +  +   L      +V   L E E+ ++   I    +V+ D +  +     +L   
Sbjct: 9  GREKAAILLISLGPDVSAKVYKHLSEEEIEKLTLEIAGVRKVDNDTKEDIVDQFHQLAMA 68

Query: 85 GCY 87
            Y
Sbjct: 69 QEY 71


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.317    0.198    0.718 

Lambda     K      H
   0.267   0.0606    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,079,298,525
Number of Sequences: 13984884
Number of extensions: 162189625
Number of successful extensions: 580011
Number of sequences better than 10.0: 3215
Number of HSP's better than 10.0 without gapping: 5233
Number of HSP's successfully gapped in prelim test: 399
Number of HSP's that attempted gapping in prelim test: 572028
Number of HSP's gapped (non-prelim): 5741
length of query: 122
length of database: 4,792,584,752
effective HSP length: 89
effective length of query: 33
effective length of database: 3,547,930,076
effective search space: 117081692508
effective search space used: 117081692508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.6 bits)
S2: 77 (33.7 bits)