HHsearch alignment for GI: 254780240 and conserved domain: COG0466

>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].
Probab=97.12  E-value=0.00039  Score=46.65  Aligned_cols=58  Identities=28%  Similarity=0.542  Sum_probs=38.9

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHC--CCEECHHHHHHH-HHH--HHHHH----HHHHHHHHHCCCCCC
Q ss_conf             99987889996789999999718--948957899999-996--00145----666677641344554
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLN--VPQLSTGDMLRA-EVD--RNTLL----GKQVKGSMESGSLIS   60 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~--~~~is~gdllR~-~~~--~~s~~----g~~i~~~l~~G~lvp   60 (201)
T Consensus       353 LcLVGPPGVGKTSLgkSIA~al~RkfvR~sLGGvrDEAEIRGHRRTYIGaMPGrIiQ~mkka~~~NP  419 (782)
T COG0466         353 LCLVGPPGVGKTSLGKSIAKALGRKFVRISLGGVRDEAEIRGHRRTYIGAMPGKIIQGMKKAGVKNP  419 (782)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             9997899887011899999995897799954765427775355312335687289999998677687