HHsearch alignment for GI: 254780240 and conserved domain: COG0572
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism].
Probab=97.88 E-value=3.8e-05 Score=52.99 Aligned_cols=140 Identities=20% Similarity=0.236 Sum_probs=76.3
Q ss_pred EECCCCCCHHHHHHHHHHHHCCC---EECHHHHH-------HH---HHHHHHHH-------HHHHHHHHHCCCCCCCHHH
Q ss_conf 98788999678999999971894---89578999-------99---99600145-------6666776413445541035
Q gi|254780240|r 5 FLGPPGSGKGTQACRLSQKLNVP---QLSTGDML-------RA---EVDRNTLL-------GKQVKGSMESGSLISDAIV 64 (201)
Q Consensus 5 i~G~PGsGK~T~a~~la~~~~~~---~is~gdll-------R~---~~~~~s~~-------g~~i~~~l~~G~lvpd~ii 64 (201)
T Consensus 13 IaG~SgSGKTTv~~~l~~~~~~~~~~~I~~D~YYk~~~~~~~~~~~~~n~d~p~A~D~dLl~~~L~-~L~~g~~v~~P~y 91 (218)
T COG0572 13 IAGGSGSGKTTVAKELSEQLGVEKVVVISLDDYYKDQSHLPFEERNKINYDHPEAFDLDLLIEHLK-DLKQGKPVDLPVY 91 (218)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCHHHCCCCCCCCHHHHCHHHHHHHHH-HHHCCCCCCCCCC
T ss_conf 867987788999999999828675247652232025301667553785744823436899999999-9976992245642
Q ss_pred HHHHHHHHCC---CCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 6655542023---2225317863801112457888766653125222103555422125664233112323334556567
Q gi|254780240|r 65 NQVVCDRIRL---PDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSD 141 (201)
Q Consensus 65 ~~li~~~l~~---~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~D 141 (201)
T Consensus 92 d~~~~~r~~~~i~~~p~~VIIvEGi~~l~------d~~lr~---~~d~kIfvdt~~D~RliRri~RD~~~rg~------- 155 (218)
T COG0572 92 DYKTHTREPETIKVEPNDVVIVEGILLLY------DERLRD---LMDLKIFVDTDADVRLIRRIKRDVQERGR------- 155 (218)
T ss_pred CHHCCCCCCCCCCCCCCCEEEEECCCCCC------CHHHHH---HCCEEEEEECCCCHHHHHHHHHHHHHHCC-------
T ss_conf 03136325773313897289994230015------076776---60678999778327889988877988199-------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898999999999999756999999
Q gi|254780240|r 142 DKYDVFLKRIENYRKTILPLSSYY 165 (201)
Q Consensus 142 D~~e~i~~Rl~~y~~~~~pv~~~y 165 (201)
T Consensus 156 -~---~~~vi~qy~~~vkp~~~~f 175 (218)
T COG0572 156 -D---LESVIEQYVKTVRPMYEQF 175 (218)
T ss_pred -C---HHHHHHHHHHHHCHHHHHC
T ss_conf -9---8999999998617414601