HHsearch alignment for GI: 254780240 and conserved domain: COG0703
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism].
Probab=99.14 E-value=6.4e-10 Score=82.91 Aligned_cols=160 Identities=21% Similarity=0.285 Sum_probs=94.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHCCCCC--
Q ss_conf 9699987889996789999999718948957899999996001456666776413-4455410356655542023222--
Q gi|254780240|r 1 MRIIFLGPPGSGKGTQACRLSQKLNVPQLSTGDMLRAEVDRNTLLGKQVKGSMES-GSLISDAIVNQVVCDRIRLPDC-- 77 (201)
Q Consensus 1 m~I~i~G~PGsGK~T~a~~la~~~~~~~is~gdllR~~~~~~s~~g~~i~~~l~~-G~lvpd~ii~~li~~~l~~~~~-- 77 (201)
T Consensus 3 ~~IvLiG~mGaGKSTIGr~LAk~L~~~F~D~D~~Ie~~------~g~sI~eIF~~~GE~~FR~~E~~vl~~l~~~~~~Vi 76 (172)
T COG0703 3 MNIVLIGFMGAGKSTIGRALAKALNLPFIDTDQEIEKR------TGMSIAEIFEEEGEEGFRRLETEVLKELLEEDNAVI 76 (172)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 61899717999776899999998199802246999999------796999999998289999999999999862699599
Q ss_pred --CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC---CHHHHHHHHH
Q ss_conf --53178638011124578887666531252221035554221256642331123233345565678---9899999999
Q gi|254780240|r 78 --DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDD---KYDVFLKRIE 152 (201)
Q Consensus 78 --~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD---~~e~i~~Rl~ 152 (201)
T Consensus 77 aTGGG~v~~-----~enr~~----l~~~----g~vv~L~~~~e~l~~Rl~~~~~RPll----~~~~~~~~l~~L~~~R~~ 139 (172)
T COG0703 77 ATGGGAVLS-----EENRNL----LKKR----GIVVYLDAPFETLYERLQRDRKRPLL----QTEDPREELEELLEERQP 139 (172)
T ss_pred ECCCCCCCC-----HHHHHH----HHHC----CEEEEEECCHHHHHHHHCCCCCCCCC----CCCCHHHHHHHHHHHHHH
T ss_conf 779861168-----999999----9848----85899969999999982346679865----677768999999999899
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999756999999967979999389988999999999999999
Q gi|254780240|r 153 NYRKTILPLSSYYRDMGCLYIIDGMLDMDEVSRSIDSLLVSVR 195 (201)
Q Consensus 153 ~y~~~~~pv~~~y~~~~~l~~Idg~~~~~eV~~~I~~~l~~~~ 195 (201)
T Consensus 140 ~Y~e~------------a~~~~~~~~~~~~v~~~i~~~l~~~~ 170 (172)
T COG0703 140 LYREV------------ADFIIDTDDRSEEVVEEILEALEGSL 170 (172)
T ss_pred HHHHH------------CCEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 99972------------74884489984899999999998732