HHsearch alignment for GI: 254780240 and conserved domain: COG1220

>COG1220 HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones].

Probab=94.61  E-value=0.046  Score=33.66  Aligned_cols=28  Identities=36%  Similarity=0.650  Sum_probs=25.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf             6999878899967899999997189489
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKLNVPQL   29 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~~~~~i   29 (201)
T Consensus        52 NILMIGpTGVGKTEIARRLAkl~~aPFi   79 (444)
T COG1220          52 NILMIGPTGVGKTEIARRLAKLAGAPFI   79 (444)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf             3588888887688999999998489837