HHsearch alignment for GI: 254780240 and conserved domain: COG1224
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=96.91 E-value=0.00086 Score=44.49 Aligned_cols=37 Identities=32% Similarity=0.648 Sum_probs=29.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHC----CCEECHHHHHHHHH
Q ss_conf 99987889996789999999718----94895789999999
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLN----VPQLSTGDMLRAEV 39 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~----~~~is~gdllR~~~ 39 (201)
T Consensus 68 iLi~GppgTGKTAlA~gIa~eLG~dvPF~~isgsEiYS~E~ 108 (450)
T COG1224 68 ILIVGPPGTGKTALAMGIARELGEDVPFVAISGSEIYSLEV 108 (450)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEECC
T ss_conf 99978999768899999999858999821501332233100