HHsearch alignment for GI: 254780240 and conserved domain: KOG3354

Probab=98.36  E-value=1.4e-06  Score=61.96  Aligned_cols=161  Identities=18%  Similarity=0.193  Sum_probs=85.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH---HHHCC-CCCC
Q ss_conf             9998788999678999999971894895789999999600145666677641344554103566555---42023-2225
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVC---DRIRL-PDCD   78 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~---~~l~~-~~~~   78 (201)
T Consensus        15 i~vmGvsGsGKSTigk~L~~~l~~~F~dgDd~H----------p~~NveKM~~GipLnD~DR~pWL~~i~~~~~~~l~~~   84 (191)
T KOG3354          15 IVVMGVSGSGKSTIGKALSEELGLKFIDGDDLH----------PPANVEKMTQGIPLNDDDRWPWLKKIAVELRKALASG   84 (191)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC----------CHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             999835887744599999998588624555579----------8788998836998885321179999999999876327


Q ss_pred             CEEEEC--CCHHHHHHHHHHHHHHH-----HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             317863--80111245788876665-----31252221035554221256642331123233345565678989999999
Q gi|254780240|r   79 SGFILD--GYPRTVDQAKSLHAFIS-----NMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYDVFLKRI  151 (201)
Q Consensus        79 ~g~ilD--GFPRt~~Qa~~l~~~l~-----~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~R~DD~~e~i~~Rl  151 (201)
T Consensus        85 q~vVlACSaLKk~YRd--ILr~sl~~gk~~~~~~~~l~fi~l~~s~evi~~Rl~~R~gHFMp----------~~lleSQf  152 (191)
T KOG3354          85 QGVVLACSALKKKYRD--ILRHSLKDGKPGKCPESQLHFILLSASFEVILKRLKKRKGHFMP----------ADLLESQF  152 (191)
T ss_pred             CEEEEEHHHHHHHHHH--HHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCC----------HHHHHHHH
T ss_conf             8189972888899999--99732114786678640588863304299999998406666688----------78999888


Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCC-CCHHHHHHHHHHHHH
Q ss_conf             99999756999999967979999389-988999999999999
Q gi|254780240|r  152 ENYRKTILPLSSYYRDMGCLYIIDGM-LDMDEVSRSIDSLLV  192 (201)
Q Consensus       152 ~~y~~~~~pv~~~y~~~~~l~~Idg~-~~~~eV~~~I~~~l~  192 (201)
T Consensus       153 ---~~LE~p~~----~e~div~isv~~~~~e~iv~tI~k~~~  187 (191)
T KOG3354         153 ---ATLEAPDA----DEEDIVTISVKTYSVEEIVDTIVKMVA  187 (191)
T ss_pred             ---HHCCCCCC----CCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf             ---75269999----824668886034789999999999998