HHsearch alignment for GI: 254780240 and conserved domain: PRK00698

>PRK00698 tmk thymidylate kinase; Validated.
Probab=99.51  E-value=1.7e-13  Score=105.41  Aligned_cols=169  Identities=23%  Similarity=0.246  Sum_probs=90.6

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHH---CCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCHH-----------H
Q ss_conf             969998788999678999999971---894895789999999600145666677641344--554103-----------5
Q gi|254780240|r    1 MRIIFLGPPGSGKGTQACRLSQKL---NVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGS--LISDAI-----------V   64 (201)
Q Consensus         1 m~I~i~G~PGsGK~T~a~~la~~~---~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~--lvpd~i-----------i   64 (201)
T Consensus         4 ~fIviEGiDGsGKsTq~~~L~~~L~~~g~~v~~t----~e--P~~t~~g~~ir~~~~~~~~~~~~~~~~lLf~adR~~~~   77 (204)
T PRK00698          4 MFITIEGIDGAGKSTQIELLAERLEEQGRDVVFT----RE--PGGTPLGEKLRELLLDPNEPMDDKTELLLFLAARAQHL   77 (204)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE----EC--CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             1999988999989999999999999679978998----69--99980699999998277767998999999999999999


Q ss_pred             HHHHHHHHCCCCCCCEEEECCCH----------HHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             66555420232225317863801----------11245--7888766653125222103555422125664233112323
Q gi|254780240|r   65 NQVVCDRIRLPDCDSGFILDGYP----------RTVDQ--AKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAI  132 (201)
Q Consensus        65 ~~li~~~l~~~~~~~g~ilDGFP----------Rt~~Q--a~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~  132 (201)
T Consensus        78 ~~~I~p~L~~---g~iVI~DRy~~S~~aYqg~~~~~~~~~i~~l~~~~~-~~~~PDl~i~Ldv~~e~~~~Ri~~R~~~--  151 (204)
T PRK00698         78 EEVIKPALAR---GKWVISDRFIDSSLAYQGGGRGLDIDLLAALNRFAL-GGFRPDLTLYLDVPPEVGLARIAARGEL--  151 (204)
T ss_pred             HHHHHHHHHC---CCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCCCEEEEEECCHHHHHHHHHHCCCC--
T ss_conf             9999988836---998998364050999998607999999999998872-7999985899817999999999837986--


Q ss_pred             CCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             3345565678-9899999999999975699999996-79799993899889999999999999
Q gi|254780240|r  133 ASEKSVRSDD-KYDVFLKRIENYRKTILPLSSYYRD-MGCLYIIDGMLDMDEVSRSIDSLLVS  193 (201)
Q Consensus       133 ~~~~~~R~DD-~~e~i~~Rl~~y~~~~~pv~~~y~~-~~~l~~Idg~~~~~eV~~~I~~~l~~  193 (201)
T Consensus       152 -----dr~e~~~~~~~~kv~~~Y-------~~l~~~~~~~~~~IDa~~~~eeV~~~I~~~i~~  202 (204)
T PRK00698        152 -----DRIEQEGLDFFERVREGY-------LELAAADPERIVVIDASQSLEEVHEDILAVLKA  202 (204)
T ss_pred             -----CCHHHHHHHHHHHHHHHH-------HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             -----420150099999999999-------999985889689984999999999999999996