HHsearch alignment for GI: 254780240 and conserved domain: PRK00698
>PRK00698 tmk thymidylate kinase; Validated.
Probab=99.51 E-value=1.7e-13 Score=105.41 Aligned_cols=169 Identities=23% Similarity=0.246 Sum_probs=90.6
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHH---CCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCHH-----------H
Q ss_conf 969998788999678999999971---894895789999999600145666677641344--554103-----------5
Q gi|254780240|r 1 MRIIFLGPPGSGKGTQACRLSQKL---NVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGS--LISDAI-----------V 64 (201)
Q Consensus 1 m~I~i~G~PGsGK~T~a~~la~~~---~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~--lvpd~i-----------i 64 (201)
T Consensus 4 ~fIviEGiDGsGKsTq~~~L~~~L~~~g~~v~~t----~e--P~~t~~g~~ir~~~~~~~~~~~~~~~~lLf~adR~~~~ 77 (204)
T PRK00698 4 MFITIEGIDGAGKSTQIELLAERLEEQGRDVVFT----RE--PGGTPLGEKLRELLLDPNEPMDDKTELLLFLAARAQHL 77 (204)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE----EC--CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 1999988999989999999999999679978998----69--99980699999998277767998999999999999999
Q ss_pred HHHHHHHHCCCCCCCEEEECCCH----------HHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 66555420232225317863801----------11245--7888766653125222103555422125664233112323
Q gi|254780240|r 65 NQVVCDRIRLPDCDSGFILDGYP----------RTVDQ--AKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAI 132 (201)
Q Consensus 65 ~~li~~~l~~~~~~~g~ilDGFP----------Rt~~Q--a~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~ 132 (201)
T Consensus 78 ~~~I~p~L~~---g~iVI~DRy~~S~~aYqg~~~~~~~~~i~~l~~~~~-~~~~PDl~i~Ldv~~e~~~~Ri~~R~~~-- 151 (204)
T PRK00698 78 EEVIKPALAR---GKWVISDRFIDSSLAYQGGGRGLDIDLLAALNRFAL-GGFRPDLTLYLDVPPEVGLARIAARGEL-- 151 (204)
T ss_pred HHHHHHHHHC---CCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHH-CCCCCCEEEEEECCHHHHHHHHHHCCCC--
T ss_conf 9999988836---998998364050999998607999999999998872-7999985899817999999999837986--
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 3345565678-9899999999999975699999996-79799993899889999999999999
Q gi|254780240|r 133 ASEKSVRSDD-KYDVFLKRIENYRKTILPLSSYYRD-MGCLYIIDGMLDMDEVSRSIDSLLVS 193 (201)
Q Consensus 133 ~~~~~~R~DD-~~e~i~~Rl~~y~~~~~pv~~~y~~-~~~l~~Idg~~~~~eV~~~I~~~l~~ 193 (201)
T Consensus 152 -----dr~e~~~~~~~~kv~~~Y-------~~l~~~~~~~~~~IDa~~~~eeV~~~I~~~i~~ 202 (204)
T PRK00698 152 -----DRIEQEGLDFFERVREGY-------LELAAADPERIVVIDASQSLEEVHEDILAVLKA 202 (204)
T ss_pred -----CCHHHHHHHHHHHHHHHH-------HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf -----420150099999999999-------999985889689984999999999999999996