HHsearch alignment for GI: 254780240 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=97.62 E-value=6.5e-05 Score=51.52 Aligned_cols=27 Identities=30% Similarity=0.605 Sum_probs=24.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf 999878899967899999997189489
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQL 29 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~i 29 (201)
T Consensus 43 lLL~GPpGvGKTT~a~~lAk~~g~~vi 69 (403)
T PRK04195 43 LLLYGPPGVGKTSLAHALANDYGWEVI 69 (403)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 998893998799999999998499859