HHsearch alignment for GI: 254780240 and conserved domain: PRK05480

>PRK05480 uridine kinase; Provisional.
Probab=98.32  E-value=1.2e-05  Score=56.11  Aligned_cols=169  Identities=18%  Similarity=0.174  Sum_probs=83.2

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCC---CEECHHHHHHH-------HHHH---HHH-------HHHHHHHHHHCCCCCC--
Q ss_conf             999878899967899999997189---48957899999-------9960---014-------5666677641344554--
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNV---PQLSTGDMLRA-------EVDR---NTL-------LGKQVKGSMESGSLIS--   60 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~---~~is~gdllR~-------~~~~---~s~-------~g~~i~~~l~~G~lvp--   60 (201)
T Consensus         9 IgIaG~SgSGKTT~a~~L~~~l~~~~v~vi~~D~Yy~~~~~~~~~e~~~~nfD~P~a~d~~ll~~~L~-~L~~G~~v~~P   87 (209)
T PRK05480          9 IGIAGGSGSGKTTVASTIYEELGDESIAVISQDSYYKDQSHLSMEERVKTNYDHPDAFDHDLLIEHLK-ALKAGKAIEIP   87 (209)
T ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH-HHHCCCCCCCC
T ss_conf             99989997789999999999808687599955441247340788681236878826766999999999-99749987567


Q ss_pred             --CHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             --103566555420232225317863801112457888766653125222103555422125664233112323334556
Q gi|254780240|r   61 --DAIVNQVVCDRIRLPDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSV  138 (201)
Q Consensus        61 --d~ii~~li~~~l~~~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~  138 (201)
T Consensus        88 ~Ydf~t~~r~~~~-~~i~~~~iiIvEGi~~l--~----~~~lr~---~~DlkIfid~~~d~rl~RRi~RD~~eR-----G  152 (209)
T PRK05480         88 VYDYTEHTRSKET-IHVEPKDVIILEGILLL--E----DERLRD---LMDIKIFVDTPLDIRLIRRLKRDVNER-----G  152 (209)
T ss_pred             CCCCCCCCCCCCE-EEECCCCEEEEECHHHC--C----CHHHHH---HHCEEEEEECCHHHHHHHHHHHHHHHH-----C
T ss_conf             5445566557863-89669876999345640--6----787886---526579996677789999999789997-----8


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHH----HHCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             567898999999999999756999999----96797999938998899999999999999
Q gi|254780240|r  139 RSDDKYDVFLKRIENYRKTILPLSSYY----RDMGCLYIIDGMLDMDEVSRSIDSLLVSV  194 (201)
Q Consensus       139 R~DD~~e~i~~Rl~~y~~~~~pv~~~y----~~~~~l~~Idg~~~~~eV~~~I~~~l~~~  194 (201)
T Consensus       153 r---~~e~v---i~q~~~~v~p~~~~yI~P~k~~A-DlII~~~~~~~va~~~i~~~i~~~  205 (209)
T PRK05480        153 R---SLESV---INQYLSTVRPMHLQFIEPSKRYA-DIIIPEGGKNRVAIDILKAKIRQL  205 (209)
T ss_pred             C---CHHHH---HHHHHHHHHHHHHHHCHHHHHCC-EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             8---99999---99999976576997684527424-089889996459999999999999