HHsearch alignment for GI: 254780240 and conserved domain: PRK05480
>PRK05480 uridine kinase; Provisional.
Probab=98.32 E-value=1.2e-05 Score=56.11 Aligned_cols=169 Identities=18% Similarity=0.174 Sum_probs=83.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCC---CEECHHHHHHH-------HHHH---HHH-------HHHHHHHHHHCCCCCC--
Q ss_conf 999878899967899999997189---48957899999-------9960---014-------5666677641344554--
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNV---PQLSTGDMLRA-------EVDR---NTL-------LGKQVKGSMESGSLIS-- 60 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~---~~is~gdllR~-------~~~~---~s~-------~g~~i~~~l~~G~lvp-- 60 (201)
T Consensus 9 IgIaG~SgSGKTT~a~~L~~~l~~~~v~vi~~D~Yy~~~~~~~~~e~~~~nfD~P~a~d~~ll~~~L~-~L~~G~~v~~P 87 (209)
T PRK05480 9 IGIAGGSGSGKTTVASTIYEELGDESIAVISQDSYYKDQSHLSMEERVKTNYDHPDAFDHDLLIEHLK-ALKAGKAIEIP 87 (209)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH-HHHCCCCCCCC
T ss_conf 99989997789999999999808687599955441247340788681236878826766999999999-99749987567
Q ss_pred --CHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf --103566555420232225317863801112457888766653125222103555422125664233112323334556
Q gi|254780240|r 61 --DAIVNQVVCDRIRLPDCDSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSV 138 (201)
Q Consensus 61 --d~ii~~li~~~l~~~~~~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~~~~~~ 138 (201)
T Consensus 88 ~Ydf~t~~r~~~~-~~i~~~~iiIvEGi~~l--~----~~~lr~---~~DlkIfid~~~d~rl~RRi~RD~~eR-----G 152 (209)
T PRK05480 88 VYDYTEHTRSKET-IHVEPKDVIILEGILLL--E----DERLRD---LMDIKIFVDTPLDIRLIRRLKRDVNER-----G 152 (209)
T ss_pred CCCCCCCCCCCCE-EEECCCCEEEEECHHHC--C----CHHHHH---HHCEEEEEECCHHHHHHHHHHHHHHHH-----C
T ss_conf 5445566557863-89669876999345640--6----787886---526579996677789999999789997-----8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH----HHCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 567898999999999999756999999----96797999938998899999999999999
Q gi|254780240|r 139 RSDDKYDVFLKRIENYRKTILPLSSYY----RDMGCLYIIDGMLDMDEVSRSIDSLLVSV 194 (201)
Q Consensus 139 R~DD~~e~i~~Rl~~y~~~~~pv~~~y----~~~~~l~~Idg~~~~~eV~~~I~~~l~~~ 194 (201)
T Consensus 153 r---~~e~v---i~q~~~~v~p~~~~yI~P~k~~A-DlII~~~~~~~va~~~i~~~i~~~ 205 (209)
T PRK05480 153 R---SLESV---INQYLSTVRPMHLQFIEPSKRYA-DIIIPEGGKNRVAIDILKAKIRQL 205 (209)
T ss_pred C---CHHHH---HHHHHHHHHHHHHHHCHHHHHCC-EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8---99999---99999976576997684527424-089889996459999999999999