HHsearch alignment for GI: 254780240 and conserved domain: PRK05506

Probab=96.58  E-value=0.0039  Score=40.40  Aligned_cols=103  Identities=21%  Similarity=0.287  Sum_probs=55.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHH---C-CCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             9998788999678999999971---8-94895789999999600145666677641344554103566555420232225
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKL---N-VPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLPDCD   78 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~---~-~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~li~~~l~~~~~~   78 (201)
T Consensus       446 iw~tGlsgsGKstiA~~le~~L~~~g~~~~~LDGd~lR~gl~~dlgf--~~~dR~enirR~--~eva~l~~~--------  513 (613)
T PRK05506        446 VWFTGLSGSGKSTIANLVERRLHALGRHTYVLDGDNVRHGLNRDLGF--TDADRVENIRRV--AEVARLMAD--------  513 (613)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCC--CHHHHHHHHHHH--HHHHHHHHH--------
T ss_conf             99977898974799999999999779987998808987410457797--989999999999--999999986--------


Q ss_pred             CE-EE----ECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             31-78----63801112457888766653125222103555422125664
Q gi|254780240|r   79 SG-FI----LDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDASMFKR  123 (201)
Q Consensus        79 ~g-~i----lDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R  123 (201)
T Consensus       514 aG~i~i~a~iSp~~~~R~~~r~~---~~~---~~f~Ev~v~~~le~c~~R  557 (613)
T PRK05506        514 AGLIVLVSFISPFREERELARAL---IGE---GEFVEVFVDTPLEVCEAR  557 (613)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHH---CCC---CCEEEEEEECCHHHHHHC
T ss_conf             89889997588998999999975---788---878999990899999762