HHsearch alignment for GI: 254780240 and conserved domain: PRK05563
>PRK05563 DNA polymerase III subunits gamma and tau; Validated.
Probab=97.43 E-value=0.00013 Score=49.62 Aligned_cols=114 Identities=16% Similarity=0.340 Sum_probs=53.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEECHHH------HHHHHHHHHHHH-HHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 9998788999678999999971894895789------999999600145-666677641344554103566555420232
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQLSTGD------MLRAEVDRNTLL-GKQVKGSMESGSLISDAIVNQVVCDRIRLP 75 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~is~gd------llR~~~~~~s~~-g~~i~~~l~~G~lvpd~ii~~li~~~l~~~ 75 (201)
T Consensus 41 yLf~GprG~GKTs~Ari~akalnc~~~~~~~pC~~C~~C-~~i~~g~~~Dv~Eidaas~~g----vd~iR~~~-~~~~~~ 114 (541)
T PRK05563 41 YLFCGTRGTGKTSTAKIFAKAVNCLNPQDGEPCNECEIC-KKINEGLLMDVIEIDAASNNG----VDDIREII-ENVKYP 114 (541)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH-HHHHCCCCCCEEEECCCCCCC----HHHHHHHH-HHCEEC
T ss_conf 530387995899999999999579998889857514889-998568988736624444478----89999999-761048
Q ss_pred C--C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH------HHHHHH
Q ss_conf 2--2-53178638011124578887666531252221035554221------256642
Q gi|254780240|r 76 D--C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDA------SMFKRI 124 (201)
Q Consensus 76 ~--~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~------~~~~R~ 124 (201)
T Consensus 115 p~~~~~Kv~IiDEvhm--ls~~a~nallKtlEePp~~~~Filatte~~ki~~tI~SRc 170 (541)
T PRK05563 115 PQEGKYKVYIMDEVHM--LSQGAVNAFLKTLEEPPSNVIFILATTDPQKLPITILSRC 170 (541)
T ss_pred CCCCCEEEEEEECCCC--CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHE
T ss_conf 7678705999977233--8999999999998548777569997698442745567421