HHsearch alignment for GI: 254780240 and conserved domain: PRK06995

>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=96.19  E-value=0.0027  Score=41.38  Aligned_cols=104  Identities=15%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCE-------ECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH--HHHHHHC
Q ss_conf             99987889996789999999718948-------95789999999600145666677641344554103566--5554202
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQ-------LSTGDMLRAEVDRNTLLGKQVKGSMESGSLISDAIVNQ--VVCDRIR   73 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~-------is~gdllR~~~~~~s~~g~~i~~~l~~G~lvpd~ii~~--li~~~l~   73 (201)
T Consensus       179 ~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT-~DTYRIgA------vEQLktYa~-IlgvPv~vv~~~~eL~~aL~  250 (404)
T PRK06995        179 FALVGPTGVGKTTTTAKLAARCVMRHGASKVALLT-TDSYRIGG------HEQLRIYGK-ILGVPVHAVKDAADLRLALA  250 (404)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE-CCCCCHHH------HHHHHHHHH-HCCCEEEEECCHHHHHHHHH
T ss_conf             89866888763758999999999983898379997-68754789------999999998-75955999599999999999


Q ss_pred             CCCCCCEEEEC--CC-HHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             32225317863--80-11124578887666531252221035554
Q gi|254780240|r   74 LPDCDSGFILD--GY-PRTVDQAKSLHAFISNMDCAIDAVIELRV  115 (201)
Q Consensus        74 ~~~~~~g~ilD--GF-PRt~~Qa~~l~~~l~~~~~~~~~vi~L~~  115 (201)
T Consensus       251 ~l~~~dlILIDTaGrs~rD~~~~e~l~~l-~~~~~~~~~~LVLsa  294 (404)
T PRK06995        251 ELRNKHIVLIDTVGMSQRDRMVSEQIAML-HGAGAPVQRLLLLNA  294 (404)
T ss_pred             HHCCCCEEEEECCCCCCCCHHHHHHHHHH-HHCCCCCEEEEEECC
T ss_conf             70899999980999897688899999999-735788528999779