HHsearch alignment for GI: 254780240 and conserved domain: PRK08770

Probab=96.42  E-value=0.016  Score=36.50  Aligned_cols=107  Identities=18%  Similarity=0.275  Sum_probs=55.8

Q ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCEEC----HHHH-HHHHHHHHH-----------HHH-HHHHHHHHCCCCCCCHHHH
Q ss_conf             9998788999678999999971894895----7899-999996001-----------456-6667764134455410356
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQKLNVPQLS----TGDM-LRAEVDRNT-----------LLG-KQVKGSMESGSLISDAIVN   65 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~~~~~~~is----~gdl-lR~~~~~~s-----------~~g-~~i~~~l~~G~lvpd~ii~   65 (201)
T Consensus        41 ~lf~g~rg~gkt~~ar~~a~~lnc~~~~~~~pc~~c~~c~~i~~~~~~d~~e~daas~~~v~~~r~~~~~~~~~p-----  115 (663)
T PRK08770         41 FLFTGTRGVGKTTIARIFAKSLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMP-----  115 (663)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC-----
T ss_conf             762279988888999999998678999999978778778988548988658864676588899999998443588-----


Q ss_pred             HHHHHHHCCCCC-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH------HHHHHHHHH
Q ss_conf             655542023222-531786380111245788876665312522210355542------212566423
Q gi|254780240|r   66 QVVCDRIRLPDC-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVE------DASMFKRIQ  125 (201)
Q Consensus        66 ~li~~~l~~~~~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~------~~~~~~R~~  125 (201)
T Consensus       116 ---------~~~~~kvy~idev--hmls~~~fna~lktleepp~~v~f~~att~~~k~p~t~~src~  171 (663)
T PRK08770        116 ---------SRGKFKVYLIDEV--HMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCL  171 (663)
T ss_pred             ---------CCCCEEEEEEECH--HHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCHHHHHHHH
T ss_conf             ---------7774369997004--3328999999987402786442899854873337489998887