HHsearch alignment for GI: 254780240 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.88 E-value=0.0075 Score=38.60 Aligned_cols=115 Identities=14% Similarity=0.200 Sum_probs=55.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEE--------C-HHHH-HHHHHHHHHHHH-HHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 999878899967899999997189489--------5-7899-999996001456-6667764134455410356655542
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKLNVPQL--------S-TGDM-LRAEVDRNTLLG-KQVKGSMESGSLISDAIVNQVVCDR 71 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~~~~~i--------s-~gdl-lR~~~~~~s~~g-~~i~~~l~~G~lvpd~ii~~li~~~ 71 (201)
T Consensus 48 ~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~c~~i~~~~~~d~~e~daas~~----~v~~~r~~~-~~ 122 (600)
T PRK09111 48 FMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEHCQAIMEGRHVDVIEMDAASHT----GVDDIREII-ES 122 (600)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC----CHHHHHHHH-HH
T ss_conf 7645789878999999999996698876668998898998865898866899875885155457----888999999-86
Q ss_pred HCCCC--C-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH------HHHHHH
Q ss_conf 02322--2-53178638011124578887666531252221035554221------256642
Q gi|254780240|r 72 IRLPD--C-DSGFILDGYPRTVDQAKSLHAFISNMDCAIDAVIELRVEDA------SMFKRI 124 (201)
Q Consensus 72 l~~~~--~-~~g~ilDGFPRt~~Qa~~l~~~l~~~~~~~~~vi~L~~~~~------~~~~R~ 124 (201)
T Consensus 123 ~~~~p~~~~~kv~iidevh--mls~~afnallktleepp~~~~fi~att~~~k~p~ti~src 182 (600)
T PRK09111 123 VRYRPVSARYKVYIIDEVH--MLSTAAFNALLKTLEEPPPHVKFIFATTEIRKVPVTVLSRC 182 (600)
T ss_pred HCCCCCCCCEEEEEEECCC--CCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHH
T ss_conf 0538877754699960011--05799999999876259865499996285343758998544