HHsearch alignment for GI: 254780240 and conserved domain: PRK09302

Probab=97.03  E-value=0.003  Score=41.11  Aligned_cols=79  Identities=19%  Similarity=0.256  Sum_probs=47.6

Q ss_pred             EEEECCCCCCHHHHHHHHHH---HHCC--CEE----CHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CCHHH----
Q ss_conf             99987889996789999999---7189--489----578999999960014566667764134455-----41035----
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLSQ---KLNV--PQL----STGDMLRAEVDRNTLLGKQVKGSMESGSLI-----SDAIV----   64 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la~---~~~~--~~i----s~gdllR~~~~~~s~~g~~i~~~l~~G~lv-----pd~ii----   64 (201)
T Consensus       269 tLi~Gp~GtGKTtla~qFl~~~a~~GE~~l~~~FeE~~~~l~~~a----~~~G~dl~~~~~~G~l~i~~~~p~~~~~~e~  344 (501)
T PRK09302        269 ILVSGATGTGKTLLVSKFAEAACRRGERCLLFAFEESRAQLVRNA----TSWGIDLEEMERKGLLKIICARPESTGLEDH  344 (501)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHH----HHCCCCHHHHHHCCCEEEEEECCCCCCHHHH
T ss_conf             999889998889999999999986599089999967999999999----9739984888748947999837000598999


Q ss_pred             HHHHHHHHCCCCCCCEEEECCC
Q ss_conf             6655542023222531786380
Q gi|254780240|r   65 NQVVCDRIRLPDCDSGFILDGY   86 (201)
Q Consensus        65 ~~li~~~l~~~~~~~g~ilDGF   86 (201)
T Consensus       345 ~~~i~~~v~~~~-~~rVvIDsl  365 (501)
T PRK09302        345 LQIIKREIEEFK-PSRVAVDPL  365 (501)
T ss_pred             HHHHHHHHHHCC-CCEEEECCH
T ss_conf             999999999729-989999580