HHsearch alignment for GI: 254780240 and conserved domain: PRK11331

>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.

Probab=95.39  E-value=0.016  Score=36.60  Aligned_cols=25  Identities=48%  Similarity=0.647  Sum_probs=21.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf             6999878899967899999997189
Q gi|254780240|r    2 RIIFLGPPGSGKGTQACRLSQKLNV   26 (201)
Q Consensus         2 ~I~i~G~PGsGK~T~a~~la~~~~~   26 (201)
T Consensus       196 nvIL~G~pGtGKT~lAk~lA~~l~g  220 (459)
T PRK11331        196 NIILQGPPGVGKTFVARRLAYLLTG  220 (459)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf             2796589998878999999999707