HHsearch alignment for GI: 254780240 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=97.28 E-value=0.00071 Score=45.02 Aligned_cols=36 Identities=25% Similarity=0.521 Sum_probs=29.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHH-----HCCCEECHHHHHHH
Q ss_conf 6999878899967899999997-----18948957899999
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQK-----LNVPQLSTGDMLRA 37 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~-----~~~~~is~gdllR~ 37 (201)
T Consensus 103 NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~dLv~~ 143 (248)
T PRK12377 103 NFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVMSR 143 (248)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
T ss_conf 08998999987889999999999987996999889999999