HHsearch alignment for GI: 254780240 and conserved domain: PRK13342
>PRK13342 recombination factor protein RarA; Reviewed.
Probab=97.64 E-value=6.3e-05 Score=51.62 Aligned_cols=29 Identities=31% Similarity=0.502 Sum_probs=24.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEC
Q ss_conf 69998788999678999999971894895
Q gi|254780240|r 2 RIIFLGPPGSGKGTQACRLSQKLNVPQLS 30 (201)
Q Consensus 2 ~I~i~G~PGsGK~T~a~~la~~~~~~~is 30 (201)
T Consensus 39 s~Il~GPPG~GKTTlA~iiA~~~~~~f~~ 67 (417)
T PRK13342 39 SMILWGPPGTGKTTLARIIAGATDAEFEA 67 (417)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 59988969998999999999986898899