HHsearch alignment for GI: 254780240 and conserved domain: PRK13973
>PRK13973 thymidylate kinase; Provisional.
Probab=99.55 E-value=6.8e-13 Score=101.56 Aligned_cols=176 Identities=19% Similarity=0.160 Sum_probs=95.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHH---CCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCH------------HHH
Q ss_conf 9998788999678999999971---8948957899999996001456666776413445--5410------------356
Q gi|254780240|r 3 IIFLGPPGSGKGTQACRLSQKL---NVPQLSTGDMLRAEVDRNTLLGKQVKGSMESGSL--ISDA------------IVN 65 (201)
Q Consensus 3 I~i~G~PGsGK~T~a~~la~~~---~~~~is~gdllR~~~~~~s~~g~~i~~~l~~G~l--vpd~------------ii~ 65 (201)
T Consensus 6 Iv~EGiDGsGKsTq~~~L~~~L~~~g~~v~~t----re--Pg~t~~~e~ir~~ll~~~~~~~~~~~e~lLfaA~R~eh~~ 79 (216)
T PRK13973 6 ITFEGGEGAGKSTQIRLLAERLRAAGYDVLVT----RE--PGGSPGAEAIRHVLLSGAAELYGPAMEALLFAAARDDHVE 79 (216)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE----EC--CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99889999989999999999999779957994----09--8998408999999846665789989999999999999999
Q ss_pred HHHHHHHCCCCCCCEEEECCC----------HHHHHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 655542023222531786380----------111245--78887666531252221035554221256642331123233
Q gi|254780240|r 66 QVVCDRIRLPDCDSGFILDGY----------PRTVDQ--AKSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIA 133 (201)
Q Consensus 66 ~li~~~l~~~~~~~g~ilDGF----------PRt~~Q--a~~l~~~l~~~~~~~~~vi~L~~~~~~~~~R~~~R~~~~~~ 133 (201)
T Consensus 80 ~~I~paL~~g---~~VI~DRy~~Ss~AYQg~~~~~~~~~l~~l~~~-~~~~~~PDlti~LDv~~e~a~~R~~~R~~~~-- 153 (216)
T PRK13973 80 EVIRPALARG---KIVLCDRFIDSTRAYQGVTGNVDPALLAALERV-AINGVMPDLTLILDIPAEVGLERAAKRRGSE-- 153 (216)
T ss_pred HHHHHHHHCC---CEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHH-HHCCCCCCEEEEECCCHHHHHHHHHHHCCCC--
T ss_conf 9999999779---989867862579999774278898999999999-9679999989998188899999999835776--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHC-CCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 34556567898999999999999756-999999967-9799993899889999999999999998763
Q gi|254780240|r 134 SEKSVRSDDKYDVFLKRIENYRKTIL-PLSSYYRDM-GCLYIIDGMLDMDEVSRSIDSLLVSVRKKCS 199 (201)
Q Consensus 134 ~~~~~R~DD~~e~i~~Rl~~y~~~~~-pv~~~y~~~-~~l~~Idg~~~~~eV~~~I~~~l~~~~k~~~ 199 (201)
T Consensus 154 ---------~~dr~E~~~~~f~~kVr~~Y~~la~~~~~r~~vIDa~~s~eeV~~~I~~~v~~~L~e~~ 212 (216)
T PRK13973 154 ---------TPDRFEKEDLAFHEKRREAFLQIAAQEPERCVVIDADASPEAVAAEIWAAVDQRLLEAA 212 (216)
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf ---------30025564799999999999999985988789971999999999999999999862100