HHsearch alignment for GI: 254780240 and conserved domain: TIGR01842

>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.
Probab=95.13  E-value=0.015  Score=36.76  Aligned_cols=33  Identities=33%  Similarity=0.474  Sum_probs=24.9

Q ss_pred             EEEECCCCCCHHHHHHHHH----HHHCCCEECHHHHH
Q ss_conf             9998788999678999999----97189489578999
Q gi|254780240|r    3 IIFLGPPGSGKGTQACRLS----QKLNVPQLSTGDML   35 (201)
Q Consensus         3 I~i~G~PGsGK~T~a~~la----~~~~~~~is~gdll   35 (201)
T Consensus       359 laIIGPSgSGKStLaR~~vG~W~~~~G~VRLDGadl~  395 (556)
T TIGR01842       359 LAIIGPSGSGKSTLARILVGIWPPASGSVRLDGADLK  395 (556)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEHHHHH
T ss_conf             8887478652588987887210135653364033440